Diff of the two buildlogs: -- --- b1/build.log 2025-07-27 06:55:37.524227448 +0000 +++ b2/build.log 2025-07-27 07:36:44.947154317 +0000 @@ -1,7 +1,6 @@ -W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build -I: Current time: Sat Jul 26 18:10:11 -12 2025 -I: pbuilder-time-stamp: 1753596611 +I: Current time: Sun Aug 30 03:18:45 +14 2026 +I: pbuilder-time-stamp: 1788009525 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -47,51 +46,84 @@ dpkg-source: info: applying fix_bm_for_gcc15 I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3561784/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Aug 29 13:18 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3561784' - PS1='# ' - PS2='> ' + INVOCATION_ID=035f9d98d3d847498966a53d99ea2661 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=617269 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.q8OBnbTL/pbuilderrc_weBX --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.q8OBnbTL/b1 --logfile b1/build.log ncbi-blast+_2.16.0+ds-7.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/sbin/chroot' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.q8OBnbTL/pbuilderrc_3znF --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.q8OBnbTL/b2 --logfile b2/build.log ncbi-blast+_2.16.0+ds-7.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-37-cloud-arm64 #1 SMP Debian 6.1.140-1 (2025-05-22) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 May 12 19:25 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3561784/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 May 12 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -237,7 +269,7 @@ Get: 80 http://deb.debian.org/debian trixie/main arm64 libuv1t64 arm64 1.50.0-2 [148 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 libuv1-dev arm64 1.50.0-2 [186 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 time arm64 1.9-0.2+b1 [48.1 kB] -Fetched 42.6 MB in 0s (88.2 MB/s) +Fetched 42.6 MB in 0s (152 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19964 files and directories currently installed.) @@ -580,7 +612,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-7_source.changes +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-blast+_2.16.0+ds-7_source.changes dpkg-buildpackage: info: source package ncbi-blast+ dpkg-buildpackage: info: source version 2.16.0+ds-7 dpkg-buildpackage: info: source distribution unstable @@ -611,79 +647,79 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objects/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.in -/bin/sh: 2: cd: can't cd to c++/src/objects/Makefile.sources -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.cmd -/bin/sh: 2: cd: can't cd to c++/src/objects/nt_sources.sh -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objects/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.in: Not a directory +/bin/sh: line 2: cd: c++/src/objects/Makefile.sources: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.cmd: Not a directory +/bin/sh: line 2: cd: c++/src/objects/nt_sources.sh: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:188: override_dh_clean] Error 127 (ignored) for x in c++/src/objtools/eutils/* ; do \ (cd "$x" && ( \ @@ -694,23 +730,23 @@ done ) ; \ ) ; \ done -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/CMakeLists.txt -/bin/sh: 2: cd: can't cd to c++/src/objtools/eutils/Makefile.in -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found -/bin/sh: 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: cd: c++/src/objtools/eutils/CMakeLists.txt: Not a directory +/bin/sh: line 2: cd: c++/src/objtools/eutils/Makefile.in: Not a directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory +/bin/sh: line 6: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:189: override_dh_clean] Error 127 (ignored) cd c++/src/objtools/eutils/efetch && \ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch purge_sources -/bin/sh: 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: not found +/bin/sh: line 2: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh: No such file or directory make[1]: [debian/rules:190: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -1935,2073 +1971,2070 @@ cd c++/BUILD/build && \ make -j12 -f Makefile.flat all_projects="algo/blast/ app/ objmgr/ objtools/align_format/ objtools/blast/" make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785109 -f Makefile.flat ptb_all.real MTARGET= +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817483 -f Makefile.flat ptb_all.real MTARGET= make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. -cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd serial/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd serial/datatool/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd algo/blast/composition_adjustment/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd util/tables/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd serial/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd serial/datatool/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/composition_adjustment/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd util/tables/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd algo/blast/core/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -cd util/sequtil/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/core/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd util/sequtil/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/blast/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd db/sqlite/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd db/sqlite/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +cd objmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.composition_adjustment.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.serial.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.tables.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo3785142 flag-stamps -/usr/bin/make[4] (Makefile.blast_services.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make[4] (Makefile.sequtil.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `flag-stamps'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.connssl.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +cd objtools/blast/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo817492 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.sqlitewrapp.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make[4] (Makefile.objmgr.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[5] (Makefile.precompile): Nothing to be done for `all'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -j12 --jobserver-auth=fifo:/tmp/GMfifo817494 flag-stamps /usr/bin/make[4] (Makefile.cserial.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo3785151 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo817493 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo817524 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -j12 --jobserver-auth=fifo:/tmp/GMfifo817516 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo817538 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo817511 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -j12 --jobserver-auth=fifo:/tmp/GMfifo3785159 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo817507 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +cd objtools/logging/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. -cd objtools/logging/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make[4] (Makefile.connect.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3785182 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo3785206 flag-stamps +cd objtools/readers/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -j12 --jobserver-auth=fifo:/tmp/GMfifo3785215 flag-stamps -/usr/bin/make[4] (Makefile.seqdb.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo3785242 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -j12 --jobserver-auth=fifo:/tmp/GMfifo3785133 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd objtools/readers/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3785291 flag-stamps -/usr/bin/make[4] (Makefile.xxconnect.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +cd objmgr/util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +cd objtools/seqmasks_io/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -j12 --jobserver-auth=fifo:/tmp/GMfifo817491 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +cd util/profile/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.logging.lib): Nothing to be done for `export-headers'. -cd objmgr/util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -cd objtools/seqmasks_io/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3785463 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -cd util/profile/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. -cd algo/blast/dbindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +cd algo/blast/dbindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/dustmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +cd algo/dustmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +cd algo/winmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.xobjread.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -cd algo/winmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -j12 --jobserver-auth=fifo:/tmp/GMfifo817753 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/make[4] (Makefile.xconnect.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -j12 --jobserver-auth=fifo:/tmp/GMfifo3785691 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.utrtprof.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objtools/alnmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make[4] (Makefile.seqmasks_io.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/make[4] (Makefile.xalgodustmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/make[4] (Makefile.xalgoblastdbindex.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `flag-stamps'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/make[4] (Makefile.xobjreadex.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' /usr/bin/make[4] (Makefile.xalgowinmask.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -j12 --jobserver-auth=fifo:/tmp/GMfifo818016 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -j12 --jobserver-auth=fifo:/tmp/GMfifo3785133 flag-stamps +/usr/bin/make[4] (Makefile.xxconnect2.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.test_mt.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objtools/alnmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=cserial -j12 --jobserver-auth=fifo:/tmp/GMfifo817491 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -j12 --jobserver-auth=fifo:/tmp/GMfifo818129 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo818208 flag-stamps +/usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `flag-stamps'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo818136 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo818198 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -j12 --jobserver-auth=fifo:/tmp/GMfifo3786024 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' +/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -j12 --jobserver-auth=fifo:/tmp/GMfifo818169 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/make[4] (Makefile.xthrserv.lib): Nothing to be done for `export-headers'. -cd algo/blast/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd algo/blast/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -j12 --jobserver-auth=fifo:/tmp/GMfifo818245 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -j12 --jobserver-auth=fifo:/tmp/GMfifo818041 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -j12 --jobserver-auth=fifo:/tmp/GMfifo3785831 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3786041 flag-stamps -/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -j12 --jobserver-auth=fifo:/tmp/GMfifo3785983 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3786035 flag-stamps +/usr/bin/make[4] (Makefile.alnmgr.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3786159 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo3786019 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +cd objtools/blast/gene_info_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd util/compress/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -cd util/compress/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3786265 flag-stamps +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd connect/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/pubseq_gateway/client/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connssl -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps +/usr/bin/make[4] (Makefile.xblast.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +/usr/bin/make[4] (Makefile.gene_info.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo818548 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3786481 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd connect/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/pubseq_gateway/client/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /usr/bin/make[4] (Makefile.ncbi_xreader_cache.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.ncbi_xreader.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -j12 --jobserver-auth=fifo:/tmp/GMfifo3785831 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -cd cgi/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -j12 --jobserver-auth=fifo:/tmp/GMfifo3786699 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make[4] (Makefile.ncbi_xreader_id2.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make[4] (Makefile.ncbi_xreader_id1.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.compress.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -j12 --jobserver-auth=fifo:/tmp/GMfifo818689 flag-stamps /usr/bin/make[4] (Makefile.xconnserv.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +cd cgi/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjreadex -j12 --jobserver-auth=fifo:/tmp/GMfifo818041 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -j12 --jobserver-auth=fifo:/tmp/GMfifo818802 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.psg_client.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd html/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -j12 --jobserver-auth=fifo:/tmp/GMfifo818868 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3786940 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xloader_genbank.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -cd objtools/align_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo818922 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -j12 --jobserver-auth=fifo:/tmp/GMfifo818858 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo818890 flag-stamps +/usr/bin/make[4] (Makefile.ncbi_xcache_netcache.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3786950 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -j12 --jobserver-auth=fifo:/tmp/GMfifo3786819 flag-stamps -/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3786972 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -NOTE: skipping project "fcgi_mt" due to unmet requirements -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' +cd html/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make[4] (Makefile.cgi.lib): Nothing to be done for `export-headers'. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=connect -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/align_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -j12 --jobserver-auth=fifo:/tmp/GMfifo3786992 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -j12 --jobserver-auth=fifo:/tmp/GMfifo818866 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -cd objtools/blast/blastdb_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +/usr/bin/make[4] (Makefile.ncbi_xblobstorage_netcache.lib): Nothing to be done for `export-headers'. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/blastdb_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -j12 --jobserver-auth=fifo:/tmp/GMfifo819038 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.fcgi.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -j12 --jobserver-auth=fifo:/tmp/GMfifo3786848 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make[4] (Makefile.html.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +cd connect/ext/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -cd connect/ext/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd algo/blast/blastinput/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd algo/blast/blastinput/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +NOTE: skipping project "fcgi_mt" due to unmet requirements +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3787153 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/eutils/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.align_format.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' +cd objtools/eutils/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -cd algo/blast/proteinkmer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -j12 --jobserver-auth=fifo:/tmp/GMfifo3786979 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/proteinkmer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -j12 --jobserver-auth=fifo:/tmp/GMfifo819026 flag-stamps +/usr/bin/make[4] (Makefile.blastdb_format.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -j12 --jobserver-auth=fifo:/tmp/GMfifo3787378 flag-stamps -/usr/bin/make[4] (Makefile.connext.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3787422 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make[4] (Makefile.blastinput.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo819494 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo819221 flag-stamps /usr/bin/make[4] (Makefile.proteinkmer.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.ncbi_xloader_blastdb_rmt.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -j12 --jobserver-auth=fifo:/tmp/GMfifo819441 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/make[4] (Makefile.eutils.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo818866 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make[4] (Makefile.xconnext.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3787659 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd util/xregexp/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo819644 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo819565 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd util/xregexp/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/edit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo3787795 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +cd objtools/edit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo819579 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo3786848 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo819784 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo3787830 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo3787884 flag-stamps -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -j12 --jobserver-auth=fifo:/tmp/GMfifo3787771 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo819758 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -j12 --jobserver-auth=fifo:/tmp/GMfifo3786979 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3787153 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=connext -j12 --jobserver-auth=fifo:/tmp/GMfifo819640 flag-stamps +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3787663 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xcache_netcache -j12 --jobserver-auth=fifo:/tmp/GMfifo819026 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -cd objtools/cleanup/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd objtools/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/cleanup/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +cd objtools/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd algo/blast/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.edit.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +cd algo/blast/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -j12 --jobserver-auth=fifo:/tmp/GMfifo3788244 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=fcgi -j12 --jobserver-auth=fifo:/tmp/GMfifo819221 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `flag-stamps'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make[4] (Makefile.cleanup.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/make[4] (Makefile.xblastformat.lib): Nothing to be done for `export-headers'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +/usr/bin/make[4] (Makefile.xformat.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -j12 --jobserver-auth=fifo:/tmp/GMfifo820196 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -j12 --jobserver-auth=fifo:/tmp/GMfifo819579 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/make[4] (Makefile.xregexp_template_tester.lib): Nothing to be done for `flag-stamps'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo820463 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo820486 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -j12 --jobserver-auth=fifo:/tmp/GMfifo3786979 flag-stamps make[5]: *** No rule to make target '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/FASTCGIPP.enabled', needed by 'requirements'. Stop. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' NOTE: skipping project "fcgi_mt" due to unmet requirements -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd algo/blast/igblast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo3788577 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -j12 --jobserver-auth=fifo:/tmp/GMfifo3787771 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo820345 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -j12 --jobserver-auth=fifo:/tmp/GMfifo819640 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -j12 --jobserver-auth=fifo:/tmp/GMfifo820414 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +cd algo/blast/igblast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/simple/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=ncbi_xblobstorage_netcache -j12 --jobserver-auth=fifo:/tmp/GMfifo819026 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -j12 --jobserver-auth=fifo:/tmp/GMfifo820351 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3788741 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -j12 --jobserver-auth=fifo:/tmp/GMfifo3787663 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -j12 --jobserver-auth=fifo:/tmp/GMfifo3788685 flag-stamps -/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -j12 --jobserver-auth=fifo:/tmp/GMfifo3788579 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd objtools/simple/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3788895 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' +/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make[4] (Makefile.igblast.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make[4] (Makefile.xobjsimple.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3788994 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd objtools/blast/seqdb_writer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd objtools/blast/seqdb_writer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789302 flag-stamps -/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd algo/blast/vdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +cd algo/blast/vdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -j12 --jobserver-auth=fifo:/tmp/GMfifo3789272 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -j12 --jobserver-auth=fifo:/tmp/GMfifo820886 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo820986 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +/usr/bin/make[4] (Makefile.blast_unit_test_util.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo820871 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources /usr/bin/make[4] (Makefile.writedb.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -j12 --jobserver-auth=fifo:/tmp/GMfifo817495 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -cd sra/readers/sra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789480 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/make[4] (Makefile.vdb2blast.lib): Nothing to be done for `export-headers'. +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821086 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821233 flag-stamps +cd sra/readers/sra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -j12 --jobserver-auth=fifo:/tmp/GMfifo3785171 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821068 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqalign_util.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789633 flag-stamps make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd sra/data_loaders/csra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.vdb2blast.lib): Nothing to be done for `export-headers'. -cd sra/data_loaders/csra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +cd sra/data_loaders/wgs/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789576 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789853 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -j12 --jobserver-auth=fifo:/tmp/GMfifo3789589 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -cd sra/data_loaders/wgs/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo821510 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -j12 --jobserver-auth=fifo:/tmp/GMfifo821218 flag-stamps +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.ncbi_xloader_csra.lib): Nothing to be done for `export-headers'. /usr/bin/make[4] (Makefile.sraread.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -j12 --jobserver-auth=fifo:/tmp/GMfifo821268 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +/usr/bin/make[4] (Makefile.ncbi_xloader_csra.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/dustmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/make[4] (Makefile.ncbi_xloader_wgs.lib): Nothing to be done for `export-headers'. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789853 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789654 flag-stamps -/usr/bin/make[4] (Makefile.ncbi_xloader_wgs.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/dustmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo821510 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/segmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources /usr/bin/make[4] (Makefile.srareadx.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo821662 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra TMPL=ncbi_xloader_csra -j12 --jobserver-auth=fifo:/tmp/GMfifo821563 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd algo/segmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821233 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +cd app/segmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3790096 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs TMPL=ncbi_xloader_wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo821618 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789633 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/update_blastdb.pl -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs TMPL=ncbi_xloader_wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo3790084 flag-stamps -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -j12 --jobserver-auth=fifo:/tmp/GMfifo3789933 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo821779 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo821510 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789853 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make[4] (Makefile.xalgosegmask.lib): Nothing to be done for `export-headers'. +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra TMPL=ncbi_xloader_csra -j12 --jobserver-auth=fifo:/tmp/GMfifo3789945 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -j12 --jobserver-auth=fifo:/tmp/GMfifo821508 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -cd app/segmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo3790310 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/winmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +cd app/winmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objmgr/split/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +cd objtools/align_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo822034 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -cd objmgr/split/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789853 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3790385 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast -j12 --jobserver-auth=fifo:/tmp/GMfifo821510 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo3790702 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -cd objtools/align_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -j12 --jobserver-auth=fifo:/tmp/GMfifo822004 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo3790992 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789633 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=tblastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3790096 flag-stamps -make[6]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821233 flag-stamps +make[6]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/Makefile.windowmasker_2.2.22_adapter builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo822325 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=tblastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo821662 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/cleanup-blastdb-volumes.py +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=srareadx -j12 --jobserver-auth=fifo:/tmp/GMfifo821508 flag-stamps make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/windowmasker_2.2.22_adapter.py /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker_2.2.22_adapter.py make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=srareadx -j12 --jobserver-auth=fifo:/tmp/GMfifo3789933 flag-stamps -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id2_split.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo822357 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -j12 --jobserver-auth=fifo:/tmp/GMfifo822345 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791110 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -j12 --jobserver-auth=fifo:/tmp/GMfifo3790928 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791127 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3791305 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo822450 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo3790806 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +/usr/bin/make[4] (Makefile.blast_app_util.lib): Nothing to be done for `export-headers'. +cd objtools/blast/seqdb_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo822582 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +cd objtools/blast/seqdb_reader/test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo822251 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791427 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/services/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo822714 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +cd objtools/blast/services/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_vdb_cmd -j12 --jobserver-auth=fifo:/tmp/GMfifo821662 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -cd algo/blast/composition_adjustment/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=corelib UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_vdb_cmd -j12 --jobserver-auth=fifo:/tmp/GMfifo3790096 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -j12 --jobserver-auth=fifo:/tmp/GMfifo822885 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd algo/blast/composition_adjustment/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=composition_adjustment UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -j12 --jobserver-auth=fifo:/tmp/GMfifo3791745 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd util/tables/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd util/tables/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=tables UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo822980 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -j12 --jobserver-auth=fifo:/tmp/GMfifo822948 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +cd db/sqlite/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo823064 flag-stamps +/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3791729 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791851 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo3791970 all -/usr/bin/make[4] (Makefile.corelib.lib): Nothing to be done for `all'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -cd db/sqlite/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=sqlitewrapp UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -j12 --jobserver-auth=fifo:/tmp/GMfifo3792057 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd objtools/logging/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd util/profile/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd objtools/logging/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=logging UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791935 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables TMPL=tables -j12 --jobserver-auth=fifo:/tmp/GMfifo823245 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] - 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) - | ^~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] - 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) - | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] - 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) - | ^~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo3792249 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_formatter_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3790096 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -j12 --jobserver-auth=fifo:/tmp/GMfifo3792274 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -j12 --jobserver-auth=fifo:/tmp/GMfifo3792322 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3791729 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite TMPL=sqlitewrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo823302 all +cd util/profile/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=utrtprof UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment TMPL=composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo823203 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_formatter_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo821662 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging TMPL=logging -j12 --jobserver-auth=fifo:/tmp/GMfifo823379 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -cd objtools/blast/gene_info_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/gene_info_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=gene_info UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3791851 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -j12 --jobserver-auth=fifo:/tmp/GMfifo822885 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c -o compo_heap.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_mode_condition.c -o compo_mode_condition.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/composition_adjustment.c -o composition_adjustment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/matrix_frequency_data.c -o matrix_frequency_data.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/nlm_linear_algebra.c -o nlm_linear_algebra.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefixmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo822980 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/compo_heap.c:137:1: warning: 's_CompoHeapIsValid' defined but not used [-Wunused-function] + 137 | s_CompoHeapIsValid(BlastCompo_HeapRecord * heapArray, int i, int n) + | ^~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile TMPL=utrtprof -j12 --jobserver-auth=fifo:/tmp/GMfifo823517 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -j12 --jobserver-auth=fifo:/tmp/GMfifo823611 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:200:1: warning: 's_DistinctAlignmentsLength' defined but not used [-Wunused-function] + 200 | s_DistinctAlignmentsLength(BlastCompo_Alignment * list) + | ^~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c:185:1: warning: 's_AlignmentsAreSorted' defined but not used [-Wunused-function] + 185 | s_AlignmentsAreSorted(BlastCompo_Alignment * alignments) + | ^~~~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -4010,26 +4043,10 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader TMPL=gene_info -j12 --jobserver-auth=fifo:/tmp/GMfifo3792761 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o -/bin/rm -f libtables.so .libtables.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so -/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -cd html/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd html/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=html UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -4038,109 +4055,126 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +cd corelib/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=test_boost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o +/bin/rm -f libtables.so .libtables.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtables.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC raw_scoremat.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtables.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtables.so +/bin/ln -f .tables.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.tables.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -j12 --jobserver-auth=fifo:/tmp/GMfifo824023 all +cd util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -cd util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps /usr/bin/make[4] (Makefile.test_boost.lib): Nothing to be done for `all'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html TMPL=html -j12 --jobserver-auth=fifo:/tmp/GMfifo3793150 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' +cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xconnect UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +cd util/sequtil/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/make[4] (Makefile.util.lib): Nothing to be done for `all'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/node.cpp -o node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/html.cpp -o html.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/htmlhelper.cpp -o htmlhelper.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/page.cpp -o page.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/pager.cpp -o pager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/selection.cpp -o selection.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo3793382 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -cd util/sequtil/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=sequtil UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd util/compress/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +cd serial/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xconnect -j12 --jobserver-auth=fifo:/tmp/GMfifo824236 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnect to make__connect_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/.#lock-map. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo824259 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -j12 --jobserver-auth=fifo:/tmp/GMfifo3793641 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil TMPL=sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo3793621 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -j12 --jobserver-auth=fifo:/tmp/GMfifo824329 all In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -4162,24 +4196,13 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ansi_ext.c -o ncbi_ansi_ext.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_types.c -o ncbi_types.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c -o ncbi_core.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' - 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); - | ^~~~~~~~~~ +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 's_Shmem_Lock': @@ -4444,7 +4467,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:562:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 562 | CORE_LOGF_ERRNO_X(16, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 'LBSM_Shmem_Update': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c: In function 'LBSM_Shmem_Update': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4490,48 +4520,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm_ipc.c:647:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 647 | CORE_LOGF_ERRNO_X(21, eLOG_Warning, errno, | ^~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cppantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' - 63 | METACONN_LOG(34, eLOG_Error, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c: In function 'LBSM_LookupService': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4541,16 +4532,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' - 41 | CORE_LOGF_X(subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' - 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, - | ^~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.c:120:9: note: in expansion of macro 'CORE_LOG_X' + 120 | CORE_LOG_X(1, eLOG_Error, "Invalid preceding entry in service lookup"); + | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c: In function 'CORE_SetLOGFILE_NAME_Ex': @@ -4569,32 +4556,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c:168:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 168 | CORE_LOGF_ERRNO_X(1, eLOG_Error, errno, | ^~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil.cpp -o sequtil.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert.cpp -o sequtil_convert.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_convert_imp.cpp -o sequtil_convert_imp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_manip.cpp -o sequtil_manip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_tables.cpp -o sequtil_tables.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/sequtil/sequtil_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] - 171 | } - | ^ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +antic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.c -o ncbi_priv.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_util.c -o ncbi_util.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_buffer.c -o ncbi_buffer.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c -o ncbi_socket.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c -o ncbi_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c -o ncbi_connection.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectio.cpp -o objectio.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:34: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'x_ReInit': @@ -4662,63 +4641,6 @@ 322 | CONN_LOG(3, ReInit, eLOG_Error, | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 's_Open': -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' - 570 | CORE_LOGF_X(112, level, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' - 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' - 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' - 609 | CORE_DATAF_X(109, level, data, size, - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' - 641 | CORE_LOGF_X(113, level, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4876,30 +4798,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:486:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 486 | CONN_NOT_NULL_EX(7, Description, 0); | ^~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' - 649 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -4921,22 +4819,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:486:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 486 | CONN_NOT_NULL_EX(7, Description, 0); | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' - 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetPosition': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -4980,13 +4862,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:498:5: note: in expansion of macro 'CONN_NOT_NULL_EX' 498 | CONN_NOT_NULL_EX(30, GetPosition, 0); | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] - 952 | sprintf(buf, "%p()", s_SSLSetup); - | ~^ ~~~~~~~~~~ - | | | - | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} - | void * /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5005,21 +4880,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:511:9: note: in expansion of macro 'CONN_LOG_EX' 511 | CONN_LOG_EX(31, GetPosition, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' - 956 | CORE_LOGF(eLOG_Critical, - | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5054,21 +4914,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' - 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -5084,39 +4929,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:527:5: note: in expansion of macro 'CONN_NOT_NULL' 527 | CONN_NOT_NULL(8, SetTimeout); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' - 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' - 1130 | CORE_LOGF_X(104, eLOG_Error, - | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Remove': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5129,44 +4945,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' - 1138 | CORE_LOGF_X(162, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' - 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:63:13: note: in expansion of macro 'METACONN_LOG' + 63 | METACONN_LOG(34, eLOG_Error, + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c: In function 'METACONN_Insert': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5179,25 +4964,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' - 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:41:5: note: in expansion of macro 'CORE_LOGF_X' + 41 | CORE_LOGF_X(subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' - 745 | CORE_LOGF_X(11, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connector.c:92:9: note: in expansion of macro 'METACONN_LOG' + 92 | METACONN_LOG(33, connector->next ? eLOG_Error : eLOG_Critical, + | ^~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:77: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5216,6 +4994,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:567:9: note: in expansion of macro 'CONN_LOG_EX' 567 | CONN_LOG_EX(9, SetTimeout, eLOG_Error, errbuf, eIO_InvalidArg); | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5296,6 +5075,7 @@ 606 | CONN_LOG_EX(12, GetTimeout, eLOG_Error, errbuf, 0); | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Wait': +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5320,73 +5100,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:622:5: note: in expansion of macro 'CONN_NOT_NULL' 622 | CONN_NOT_NULL(13, Wait); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' - 1384 | CORE_LOGF_X(155, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' - 1551 | CORE_LOGF_X(10, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' - 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h: In function 'NCBI_SwapPointers': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] + 171 | } + | ^ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5475,6 +5194,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:735:13: note: in expansion of macro 'CONN_LOG' 735 | CONN_LOG(17, Write, level, "Unable to write data"); | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -5500,46 +5220,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:784:5: note: in expansion of macro 'CONN_NOT_NULL' 784 | CONN_NOT_NULL(18, Write); | ^~~~~~~~~~~~~ - -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' - 1604 | CORE_LOGF_X(163, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' - 1766 | CORE_LOGF_X(111, eLOG_Trace, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5668,44 +5348,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -5743,6 +5385,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:877:9: note: in expansion of macro 'CONN_LOG' 877 | CONN_LOG(22, Read, eLOG_Critical, "Cannot read data"); | ^~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h: At top level: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5783,22 +5445,6 @@ 946 | CONN_LOG(23, Read, level, "Unable to read data"); | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_Read': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -5902,31 +5548,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' - 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6013,23 +5634,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1166:5: note: in expansion of macro 'CONN_NOT_NULL' 1166 | CONN_NOT_NULL(27, Close); | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' - 2850 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6122,11 +5726,6 @@ 1192 | CONN_LOG_EX(29, SetCallback, eLOG_Error, errbuf, eIO_InvalidArg); | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c: In function 'CONN_GetSOCK': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6139,12 +5738,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:415:13: note: in expansion of macro 'SENDMAIL_RETURN' - 415 | SENDMAIL_RETURN(3, "Recipient address is too long"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:106:11: note: in expansion of macro 'CONN_LOG_EX' + 106 | CONN_LOG_EX(subcode, func_name, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' + 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' + 1218 | CONN_NOT_NULL(36, GetSOCK); + | ^~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'x_SetupHttpProxy': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6157,9 +5765,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:418:13: note: in expansion of macro 'CORE_LOGF_X' - 418 | CORE_LOGF_X(1, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' + 72 | CORE_LOGF_X(subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:113:11: note: in expansion of macro 'CONN_LOG_EX' + 113 | CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' + 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' + 1218 | CONN_NOT_NULL(36, GetSOCK); + | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6172,12 +5789,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:554:9: note: in expansion of macro 'CORE_LOGF_X' + 554 | CORE_LOGF_X(10, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:426:13: note: in expansion of macro 'SENDMAIL_RETURN' - 426 | SENDMAIL_RETURN(4, write_error); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_CreateInternal': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6190,13 +5805,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:745:9: note: in expansion of macro 'CORE_LOGF_X' + 745 | CORE_LOGF_X(11, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:430:13: note: in expansion of macro 'SENDMAIL_RETURN2' - 430 | SENDMAIL_RETURN2(5, proto_error, buf); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6209,12 +5820,50 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:485:9: note: in expansion of macro 'SENDMAIL_RETURN' - 485 | SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: Invalid magic"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:822:13: note: in expansion of macro 'CORE_LOGF_X' + 822 | CORE_LOGF_X(12, info->http_proxy_leak ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'ConnNetInfo_Log': + -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c -o ncbi_connutil.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ipv6.c -o ncbi_ipv6.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_server_info.c -o ncbi_server_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_host_info.c -o ncbi_host_info.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c -o ncbi_service.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:137:54: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 137 | LOG_Write(lg, code, subcode, level, THIS_MODULE, CORE_CURRENT_FUNCTION, \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2140:9: note: in expansion of macro 'LOG_WRITE' + 2140 | LOG_WRITE(lg, NCBI_C_ERRCODE_X, 11, + | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_ConnectEx': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' + 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6227,12 +5876,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' + 2396 | CORE_LOGF_X(3, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:490:9: note: in expansion of macro 'SENDMAIL_RETURN' - 490 | SENDMAIL_RETURN(7, "At least one message recipient must be specified"); - | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6242,12 +5888,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2359:9: note: in expansion of macro 'CORE_LOG_X' - 2359 | CORE_LOG_X(2, eLOG_Critical, "[URL_Connect] Bad argument(s)"); - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' + 2419 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6257,12 +5903,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6275,9 +5936,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2396:9: note: in expansion of macro 'CORE_LOGF_X' - 2396 | CORE_LOGF_X(3, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' + 2535 | CORE_LOGF_X(7, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6287,12 +5963,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' - 159 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' - 2898 | CORE_LOGF(eLOG_Trace, - | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' + 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " + | ^~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6302,21 +5978,34 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:106:11: note: in expansion of macro 'CONN_LOG_EX' - 106 | CONN_LOG_EX(subcode, func_name, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' - 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' - 1218 | CONN_NOT_NULL(36, GetSOCK); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' + 2573 | CORE_LOG_X(9, eLOG_Error, + | ^~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 's_SendRcpt': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_DoLog': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6329,34 +6018,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:72:7: note: in expansion of macro 'CORE_LOGF_X' - 72 | CORE_LOGF_X(subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:113:11: note: in expansion of macro 'CONN_LOG_EX' - 113 | CONN_LOG_EX(subcode, func_name, eLOG_Critical, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:120:34: note: in expansion of macro 'CONN_NOT_NULL_EX' - 120 | #define CONN_NOT_NULL(s_c, f_n) CONN_NOT_NULL_EX(s_c, f_n, eIO_InvalidArg) - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connection.c:1218:5: note: in expansion of macro 'CONN_NOT_NULL' - 1218 | CONN_NOT_NULL(36, GetSOCK); - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:570:9: note: in expansion of macro 'CORE_LOGF_X' + 570 | CORE_LOGF_X(112, level, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:247:5: note: in expansion of macro 'DO_CORE_LOG_X' + 247 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, data, size) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:199:5: note: in expansion of macro 'DO_CORE_LOG_DATA' + 199 | DO_CORE_LOG_DATA(NCBI_C_ERRCODE_X, subcode, level, data, size, \ + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:609:9: note: in expansion of macro 'CORE_DATAF_X' + 609 | CORE_DATAF_X(109, level, data, size, + | ^~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6369,39 +6048,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2419:9: note: in expansion of macro 'CORE_LOGF_X' - 2419 | CORE_LOGF_X(4, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:415:13: note: in expansion of macro 'SENDMAIL_RETURN' + 415 | SENDMAIL_RETURN(3, "Recipient address is too long"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2471:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2471 | CORE_LOGF_ERRNO_X(5, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:641:9: note: in expansion of macro 'CORE_LOGF_X' + 641 | CORE_LOGF_X(113, level, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2488:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2488 | CORE_LOGF_ERRNO_X(6, eLOG_Error, x_errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:649:9: note: in expansion of macro 'CORE_LOGF_X' + 649 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6414,12 +6096,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:500:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 500 | SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:418:13: note: in expansion of macro 'CORE_LOGF_X' + 418 | CORE_LOGF_X(1, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6432,12 +6111,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:508:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 508 | SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:426:13: note: in expansion of macro 'SENDMAIL_RETURN' + 426 | SENDMAIL_RETURN(4, write_error); + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Init': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6450,12 +6130,29 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:513:9: note: in expansion of macro 'SENDMAIL_RETURN' - 513 | SENDMAIL_RETURN(10, "Unable to get local host name"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:430:13: note: in expansion of macro 'SENDMAIL_RETURN2' + 430 | SENDMAIL_RETURN2(5, proto_error, buf); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:163:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 163 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:885:13: note: in expansion of macro 'CORE_LOG_ERRNO_X' + 885 | CORE_LOG_ERRNO_X(161, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c: In function 'CORE_SendMailEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_InitAPI_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6471,8 +6168,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:518:9: note: in expansion of macro 'SENDMAIL_RETURN' - 518 | SENDMAIL_RETURN(11, "Write error in HELO command"); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:485:9: note: in expansion of macro 'SENDMAIL_RETURN' + 485 | SENDMAIL_RETURN(6, "SSendMailInfo inited improperly: Invalid magic"); | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -6486,12 +6183,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:521:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 521 | SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); - | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:490:9: note: in expansion of macro 'SENDMAIL_RETURN' + 490 | SENDMAIL_RETURN(7, "At least one message recipient must be specified"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6504,12 +6201,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:526:9: note: in expansion of macro 'SENDMAIL_RETURN' - 526 | SENDMAIL_RETURN(13, "Write error in MAIL command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:500:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 500 | SENDMAIL_RETURN2(8, "Cannot connect to sendmail", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6525,19 +6222,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' 364 | CORE_LOGF_X(subcode, eLOG_Error, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:529:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 529 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:508:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 508 | SENDMAIL_RETURN2(9, "Protocol error in connection init", buffer); | ^~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6550,10 +6237,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2535:9: note: in expansion of macro 'CORE_LOGF_X' - 2535 | CORE_LOGF_X(7, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c: In function 'URL_Connect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:513:9: note: in expansion of macro 'SENDMAIL_RETURN' + 513 | SENDMAIL_RETURN(10, "Unable to get local host name"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6563,33 +6252,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' - 155 | DO_CORE_LOG(0, 0, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2569:9: note: in expansion of macro 'CORE_LOG' - 2569 | CORE_LOG(eLOG_Warning, "[URL_Connect] " - | ^~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:518:9: note: in expansion of macro 'SENDMAIL_RETURN' + 518 | SENDMAIL_RETURN(11, "Write error in HELO command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:521:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 521 | SENDMAIL_RETURN2(12, "Protocol error in HELO command", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6599,27 +6288,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2573:9: note: in expansion of macro 'CORE_LOG_X' - 2573 | CORE_LOG_X(9, eLOG_Error, - | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:526:9: note: in expansion of macro 'SENDMAIL_RETURN' + 526 | SENDMAIL_RETURN(13, "Write error in MAIL command"); + | ^~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_connutil.c:2615:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 2615 | CORE_LOGF_ERRNO_X(8, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:529:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 529 | SENDMAIL_RETURN2(14, "Protocol error in MAIL command", buffer); + | ^~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6674,6 +6369,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:583:21: note: in expansion of macro 'SENDMAIL_RETURN' 583 | SENDMAIL_RETURN(32, "Write error in sending Date"); | ^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:34: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6692,6 +6396,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:590:21: note: in expansion of macro 'SENDMAIL_RETURN' 590 | SENDMAIL_RETURN(33, "Write error in sending From"); | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:952:32: warning: format '%p' expects argument of type 'void *', but argument 3 has type 'FSSLSetup' {aka 'const struct SOCKSSL_struct * (*)(void)'} [-Wformat=] + 952 | sprintf(buf, "%p()", s_SSLSetup); + | ~^ ~~~~~~~~~~ + | | | + | | FSSLSetup {aka const struct SOCKSSL_struct * (*)(void)} + | void * +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:956:13: note: in expansion of macro 'CORE_LOGF' + 956 | CORE_LOGF(eLOG_Critical, + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6719,6 +6444,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:155:5: note: in expansion of macro 'DO_CORE_LOG' + 155 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:963:13: note: in expansion of macro 'CORE_LOG' + 963 | CORE_LOG(eLOG_Critical, "Secure Socket Layer (SSL) has not" + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ @@ -6728,17 +6468,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:605:17: note: in expansion of macro 'SENDMAIL_RETURN' 605 | SENDMAIL_RETURN(18, "Write error in sending To"); | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': --map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o -/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so -/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUIL/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -6762,6 +6493,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:179:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 179 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1121:13: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' + 1121 | CORE_LOG_ERRNO_EXX(103, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6783,6 +6529,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1130:13: note: in expansion of macro 'CORE_LOGF_X' + 1130 | CORE_LOGF_X(104, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ @@ -6801,6 +6562,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1138:13: note: in expansion of macro 'CORE_LOGF_X' + 1138 | CORE_LOGF_X(162, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ | ^~~~~~~~~~~ @@ -6849,22 +6625,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -6973,17 +6733,85 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' + 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:726:9: note: in expansion of macro 'SENDMAIL_RETURN' + 726 | SENDMAIL_RETURN(30, "Write error in QUIT command"); + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' + 364 | CORE_LOGF_X(subcode, eLOG_Error, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:728:9: note: in expansion of macro 'SENDMAIL_RETURN2' + 728 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); + | ^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1315:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1315 | CORE_LOGF_ERRNO_EXX(106, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': -D/build/algo/blast/composition_adjustment' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_getlocalhostaddress': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1354:9: note: in expansion of macro 'CORE_LOGF_X' + 1354 | CORE_LOGF_X(9, reget == eDefault ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyname': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1384:9: note: in expansion of macro 'CORE_LOGF_X' + 1384 | CORE_LOGF_X(155, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -6993,12 +6821,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1516:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 1516 | CORE_LOGF_ERRNO_EXX(108, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_gethostbyaddr': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7011,12 +6840,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:347:9: note: in expansion of macro 'CORE_LOGF_X' - 347 | CORE_LOGF_X(subcode, eLOG_Error, ("[SendMail] %s", reason)); \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' + 1551 | CORE_LOGF_X(10, eLOG_Warning, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:726:9: note: in expansion of macro 'SENDMAIL_RETURN' - 726 | SENDMAIL_RETURN(30, "Write error in QUIT command"); - | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_ApproveCallback': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7029,13 +6856,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:364:9: note: in expansion of macro 'CORE_LOGF_X' - 364 | CORE_LOGF_X(subcode, eLOG_Error, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c:728:9: note: in expansion of macro 'SENDMAIL_RETURN2' - 728 | SENDMAIL_RETURN2(31, "Protocol error in QUIT command", buffer); - | ^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1604:13: note: in expansion of macro 'CORE_LOGF_X' + 1604 | CORE_LOGF_X(163, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'x_TryLowerSockFileno': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7048,9 +6872,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' - 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1766:13: note: in expansion of macro 'CORE_LOGF_X' + 1766 | CORE_LOGF_X(111, eLOG_Trace, + | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:44: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'x_ServiceName': @@ -7100,6 +6925,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:447:13: note: in expansion of macro 'CORE_LOGF_X' 447 | CORE_LOGF_X(1, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Select_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7109,29 +6935,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:1879:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1879 | CORE_LOGF_ERRNO_X(145, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7144,9 +6953,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2003:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2003 | CORE_LOGF_ERRNO_EXX(5, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Poll_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7156,32 +6966,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -cd cgi/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2157:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 2157 | CORE_LOGF_ERRNO_X(146, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/optimize_target_freq.c -o optimize_target_freq.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/redo_alignment.c -o redo_alignment.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/smith_waterman.c -o smith_waterman.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o +/bin/rm -f libcomposition_adjustment.so .libcomposition_adjustment.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libcomposition_adjustment.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libcomposition_adjustment.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libcomposition_adjustment.so +/bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.composition_adjustment.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUIL/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -7193,35 +6993,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2289:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2289 | CORE_LOGF_ERRNO_EXX(147, ready ? eLOG_Warning : eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' - 4350 | CORE_LOGF_X(142, eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +D/build/algo/blast/composition_adjustment' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_IsConnected_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7231,27 +7007,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' - 4375 | CORE_LOGF_X(22, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2850:13: note: in expansion of macro 'CORE_LOGF' + 2850 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c: In function 'SERV_SetImplicitServerType': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service.c:1241:9: warning: pointer 'svc' may be used after 'realloc' [-Wuse-after-free] 1241 | free(svc); @@ -7273,27 +7034,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2860:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 2860 | CORE_LOGF_ERRNO_EXX(6, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:159:5: note: in expansion of macro 'DO_CORE_LOG' + 159 | DO_CORE_LOG(0, 0, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:2898:25: note: in expansion of macro 'CORE_LOGF' + 2898 | CORE_LOGF(eLOG_Trace, + | ^~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Recv': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7306,31 +7066,32 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3054:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3054 | CORE_LOGF_ERRNO_EXX(7, eLOG_Trace, | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:38: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' +cd util/compress/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=compress UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Read_': +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:173:13: note: in expansion of macro 'CORE_LOGF_X' - 173 | CORE_LOGF_X(33, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3238:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3238 | CORE_LOGF_ERRNO_X(8, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Send': make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7343,10 +7104,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3615:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3615 | CORE_LOGF_ERRNO_EXX(11, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_WritePending': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7359,11 +7120,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3780:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3780 | CORE_LOGF_ERRNO_EXX(12, sock->log != eOff | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Write_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7376,41 +7136,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' - 4787 | CORE_LOGF_X(47, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3794481 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3846:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 3846 | CORE_LOGF_ERRNO_X(154, eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7423,10 +7154,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' - 4889 | CORE_LOGF_X(48, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3962:21: note: in expansion of macro 'CORE_LOGF_X' + 3962 | CORE_LOGF_X(13, !tv || (tv->tv_sec | tv->tv_usec) + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7439,12 +7169,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:3998:25: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 3998 | CORE_LOGF_ERRNO_EXX(127, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:115: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 'HEAP_Create': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7522,6 +7255,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:360:17: note: in expansion of macro 'CORE_LOGF_X' 360 | CORE_LOGF_X(34, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4049:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4049 | CORE_LOGF_ERRNO_EXX(16, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c: In function 's_HEAP_Find': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -7604,6 +7352,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:826:9: note: in expansion of macro 'CORE_LOG_X' 826 | CORE_LOG_X(10, eLOG_Warning, "Heap Free: NULL heap"); | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Close_': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7613,12 +7363,27 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, - | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4130:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4130 | CORE_LOGF_ERRNO_EXX(17, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4146:21: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4146 | CORE_LOGF_ERRNO_EXX(18, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7725,6 +7490,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:902:13: note: in expansion of macro 'CORE_LOGF_X' 902 | CORE_LOGF_X(17, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7823,6 +7592,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4208:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4208 | CORE_LOGF_ERRNO_EXX(19, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7838,21 +7624,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7913,6 +7684,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4246:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4246 | CORE_LOGF_ERRNO_EXX(21, abort == 1 ? eLOG_Warning : eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -7922,6 +7709,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1176:13: note: in expansion of macro 'CORE_LOGF_X' 1176 | CORE_LOGF_X(22, eLOG_Error, | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -7994,6 +7782,271 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c:1325:9: note: in expansion of macro 'CORE_LOGF_X' 1325 | CORE_LOGF_X(33, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Connect_': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4350:13: note: in expansion of macro 'CORE_LOGF_X' + 4350 | CORE_LOGF_X(142, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4375:13: note: in expansion of macro 'CORE_LOGF_X' + 4375 | CORE_LOGF_X(22, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4408:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4408 | CORE_LOGF_ERRNO_EXX(23, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4470:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4470 | CORE_LOGF_ERRNO_EXX(151, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4481:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4481 | CORE_LOGF_ERRNO_EXX(135, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4526:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4526 | CORE_LOGF_ERRNO_EXX(131, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4574:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4574 | CORE_LOGF_ERRNO_EXX(25, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c:32: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4616:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4616 | CORE_LOGF_ERRNO_EXX(26, sock->log != eOff + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4724:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4724 | CORE_LOGF_ERRNO_X(27, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateOnTop': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4787:9: note: in expansion of macro 'CORE_LOGF_X' + 4787 | CORE_LOGF_X(47, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4845:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4845 | CORE_LOGF_ERRNO_EXX(148, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api TMPL=compress -j12 --jobserver-auth=fifo:/tmp/GMfifo824831 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4889:17: note: in expansion of macro 'CORE_LOGF_X' + 4889 | CORE_LOGF_X(48, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4938:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 4938 | CORE_LOGF_ERRNO_EXX(50, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:4955:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 4955 | CORE_LOGF_ERRNO_X(49, eLOG_Critical, errno, + | ^~~~~~~~~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:38: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c: In function 's_VT_Open': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c:173:13: note: in expansion of macro 'CORE_LOGF_X' + 173 | CORE_LOGF_X(33, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5043:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5043 | CORE_LOGF_ERRNO_EXX(132, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8024,6 +8077,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5094:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5094 | CORE_LOGF_ERRNO_EXX(153, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8040,7 +8095,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5105:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5105 | CORE_LOGF_ERRNO_EXX(138, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8056,6 +8110,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5128:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5128 | CORE_LOGF_ERRNO_EXX(124, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8071,13 +8126,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5146:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5146 | CORE_LOGF_ERRNO_EXX(43, eLOG_Warning, | ^~~~~~~~~~~~~~~~~~~ -/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CreateListening': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8123,8 +8178,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5307:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5307 | CORE_LOGF_ERRNO_EXX(35, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8140,10 +8193,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5362:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5362 | CORE_LOGF_ERRNO_EXX(36, error != SOCK_EADDRINUSE | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/compress.cpp -o compress.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream.cpp -o stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/streambuf.cpp -o streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/stream_util.cpp -o stream_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/bzip2.cpp -o bzip2.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/lzo.cpp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -8173,6 +8229,299 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5459:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' 5459 | CORE_LOGF_ERRNO_EXX(37, eLOG_Error, | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' + 5521 | CORE_LOGF_X(115, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' + 5558 | CORE_LOGF_X(39, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' + 5822 | CORE_LOGF_X(44, eLOG_Note, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' + 5942 | CORE_LOGF_X(20, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' + 6042 | CORE_LOGF_X(88, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' + 6051 | CORE_LOGF_X(89, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_sendmail.c -o ncbi_sendmail.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_base64.c -o ncbi_base64.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_heapmgr.c -o ncbi_heapmgr.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.c -o ncbi_lb.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_connector.c -o ncbi_socket_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_file_connector.c -o ncbi_file_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' + 6108 | CORE_LOGF_X(90, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' + 6303 | CORE_LOGF_X(116, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:39: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -8181,14 +8530,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/re/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -8200,10 +8544,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5521:9: note: in expansion of macro 'CORE_LOGF_X' - 5521 | CORE_LOGF_X(115, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' + 6359 | CORE_LOGF_X(117, eLOG_Note, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' + 6584 | CORE_LOGF_X(46, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_Accept': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Adjust': @@ -8222,6 +8581,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:595:17: note: in expansion of macro 'CORE_LOGF_X' 595 | CORE_LOGF_X(2, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8267,9 +8627,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:678:17: note: in expansion of macro 'CORE_LOGF_X' 678 | CORE_LOGF_X(18, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8282,9 +8639,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5558:9: note: in expansion of macro 'CORE_LOGF_X' - 5558 | CORE_LOGF_X(39, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:688:13: note: in expansion of macro 'CORE_LOGF_X' + 688 | CORE_LOGF_X(4, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8297,9 +8654,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:688:13: note: in expansion of macro 'CORE_LOGF_X' - 688 | CORE_LOGF_X(4, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:710:9: note: in expansion of macro 'CORE_LOGF_X' + 710 | CORE_LOGF_X(1, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8312,10 +8670,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:710:9: note: in expansion of macro 'CORE_LOGF_X' - 710 | CORE_LOGF_X(1, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Connect': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:827:13: note: in expansion of macro 'CORE_LOGF_X' + 827 | CORE_LOGF_X(5, eLOG_Critical, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8328,9 +8685,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:827:13: note: in expansion of macro 'CORE_LOGF_X' - 827 | CORE_LOGF_X(5, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' + 6752 | CORE_LOGF_X(52, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8346,24 +8703,37 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:998:21: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 998 | CORE_LOGF_ERRNO_X(20, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1229:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 1229 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, - | ^~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' + 6762 | CORE_LOGF_X(53, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' + 6773 | CORE_LOGF_X(51, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ConnectAndSend': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8373,12 +8743,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5613:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5613 | CORE_LOGF_ERRNO_EXX(40, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1229:9: note: in expansion of macro 'CORE_LOGF_ERRNO_X' + 1229 | CORE_LOGF_ERRNO_X(6, uuu->reused ? eLOG_Trace : eLOG_Error, error, + | ^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkHead': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8395,21 +8765,22 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1377:9: note: in expansion of macro 'CORE_LOGF_X' 1377 | CORE_LOGF_X(23, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5738:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5738 | CORE_LOGF_ERRNO_EXX(42, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' + 6810 | CORE_LOGF_X(54, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 'x_ReadChunkTail': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8457,6 +8828,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1485:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' 1485 | CORE_LOGF_ERRNO_X(25, eLOG_Error, error, | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' + 6817 | CORE_LOGF_X(55, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_ReadHeader': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8494,15 +8880,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5748:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5748 | CORE_LOGF_ERRNO_EXX(152, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' + 6825 | CORE_LOGF_X(15, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8533,9 +8919,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1687:17: note: in expansion of macro 'CORE_LOGF_X' 1687 | CORE_LOGF_X(22, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8551,6 +8934,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1706:17: note: in expansion of macro 'CORE_DATAF_X' 1706 | CORE_DATAF_X(9, eLOG_Note, hdr, size, | ^~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8572,16 +8958,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5759:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5759 | CORE_LOGF_ERRNO_EXX(137, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_CloseListening': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' + 6971 | CORE_LOGF_X(56, eLOG_Error, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8597,9 +8985,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:1939:21: note: in expansion of macro 'CORE_LOGF_X' 1939 | CORE_LOGF_X(26, eLOG_Warning, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8630,6 +9015,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2012:13: note: in expansion of macro 'CORE_LOGF_X' 2012 | CORE_LOGF_X(19, eLOG_Warning, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8660,23 +9051,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2028:17: note: in expansion of macro 'CORE_LOGF_X' 2028 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5822:9: note: in expansion of macro 'CORE_LOGF_X' - 5822 | CORE_LOGF_X(44, eLOG_Note, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8707,7 +9081,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2045:13: note: in expansion of macro 'CORE_LOGF_X' 2045 | CORE_LOGF_X(15, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8720,25 +9093,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2228:17: note: in expansion of macro 'CORE_LOGF_X' - 2228 | CORE_LOGF_X(16, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' + 6999 | CORE_LOGF_X(57, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5848:17: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5848 | CORE_LOGF_ERRNO_EXX(45, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2228:17: note: in expansion of macro 'CORE_LOGF_X' + 2228 | CORE_LOGF_X(16, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8751,13 +9124,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2276:13: note: in expansion of macro 'CORE_LOGF_X' - 2276 | CORE_LOGF_X(21, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' + 7013 | CORE_LOGF_X(58, eLOG_Warning, | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8770,12 +9142,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2533:9: note: in expansion of macro 'CORE_LOGF_X' - 2533 | CORE_LOGF_X(24, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' + 7027 | CORE_LOGF_X(59, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8788,33 +9157,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5942:17: note: in expansion of macro 'CORE_LOGF_X' - 5942 | CORE_LOGF_X(20, eLOG_Critical, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2276:13: note: in expansion of macro 'CORE_LOGF_X' + 2276 | CORE_LOGF_X(21, eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:5995:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 5995 | CORE_LOGF_ERRNO_EXX(94, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 's_SendMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7036:17: note: in expansion of macro 'CORE_LOGF_X' + 7036 | CORE_LOGF_X(60, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c: In function 's_VT_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8827,8 +9191,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6042:9: note: in expansion of macro 'CORE_LOGF_X' - 6042 | CORE_LOGF_X(88, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c:2533:9: note: in expansion of macro 'CORE_LOGF_X' + 2533 | CORE_LOGF_X(24, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -8842,12 +9206,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6051:9: note: in expansion of macro 'CORE_LOGF_X' - 6051 | CORE_LOGF_X(89, eLOG_Error, - | ^~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:35: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' + 7046 | CORE_LOGF_X(61, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8860,22 +9221,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X' - 105 | CORE_LOGF_X(5, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' + 7056 | CORE_LOGF_X(62, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:182:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] - 182 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 - | ~^ ~~ - | | | - | int * unsigned int * - | %n -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:183:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] - 183 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 - | ~^ ~~ - | | | - | int * unsigned int * - | %n +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8888,10 +9238,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6108:17: note: in expansion of macro 'CORE_LOGF_X' - 6108 | CORE_LOGF_X(90, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' + 7225 | CORE_LOGF_X(63, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8904,9 +9254,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:960:13: note: in expansion of macro 'CORE_LOGF_X' - 960 | CORE_LOGF_X(4, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' + 7266 | CORE_LOGF_X(64, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8919,10 +9270,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:984:13: note: in expansion of macro 'CORE_LOGF_X' - 984 | CORE_LOGF_X(9, eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' + 7308 | CORE_LOGF_X(65, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8935,24 +9285,18 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1201:13: note: in expansion of macro 'CORE_LOGF_X' - 1201 | CORE_LOGF_X(6, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6159:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 6159 | CORE_LOGF_ERRNO_EXX(91, eLOG_Trace, - | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' + 7318 | CORE_LOGF_X(66, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -8965,57 +9309,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' - 1213 | CORE_LOGF_X(10, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' + 7352 | CORE_LOGF_X(125, eLOG_Error, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Create': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6213:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6213 | CORE_LOGF_ERRNO_X(28, eLOG_Error, errno, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6241:17: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6241 | CORE_LOGF_ERRNO_X(143, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:167:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 167 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, 0, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6284:13: note: in expansion of macro 'CORE_LOGF_ERRNO_X' - 6284 | CORE_LOGF_ERRNO_X(30, eLOG_Warning, err, - | ^~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:51: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -9024,6 +9320,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -j12 --jobserver-auth=fifo:/tmp/GMfifo821458 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9036,10 +9333,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6303:13: note: in expansion of macro 'CORE_LOGF_X' - 6303 | CORE_LOGF_X(116, eLOG_Note, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'TRIGGER_Close': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' + 7405 | CORE_LOGF_X(165, eLOG_Critical, + | ^~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:35: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_OpenDispatcher': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9052,9 +9351,38 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6359:9: note: in expansion of macro 'CORE_LOGF_X' - 6359 | CORE_LOGF_X(117, eLOG_Note, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:105:9: note: in expansion of macro 'CORE_LOGF_X' + 105 | CORE_LOGF_X(5, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_ParseHeader': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:182:49: warning: format '%n' expects argument of type 'int *', but argument 7 has type 'unsigned int *' [-Wformat=] + 182 | if (sscanf(header, "%u.%u.%u.%u%n", &i1, &i2, &i3, &i4, &n) < 4 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:183:51: warning: format '%n' expects argument of type 'int *', but argument 5 has type 'unsigned int *' [-Wformat=] + 183 | || sscanf(header + n, "%hu%x%n", &uuu->port, &tkt, &m) < 2 + | ~^ ~~ + | | | + | int * unsigned int * + | %n +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' + 7422 | CORE_LOGF_X(166, eLOG_Critical, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:50: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPCloseData': @@ -9149,6 +9477,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:212:9: note: in expansion of macro 'CORE_LOGF_X' 212 | CORE_LOGF_X(10, eLOG_Error, | ^~~~~~~~~~~ +.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' + 7455 | CORE_LOGF_X(67, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_FTPCommandEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9165,8 +9513,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:387:17: note: in expansion of macro 'CORE_LOGF_X' 387 | CORE_LOGF_X(4, eLOG_Trace, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'LSOCK_GetOSHandleEx': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9179,10 +9526,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6584:9: note: in expansion of macro 'CORE_LOGF_X' - 6584 | CORE_LOGF_X(46, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' + 630 | CORE_LOGF_X(3, eLOG_Trace, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPLogin': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9195,13 +9542,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:630:9: note: in expansion of macro 'CORE_LOGF_X' - 630 | CORE_LOGF_X(3, eLOG_Trace, - | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Reconnect': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:960:13: note: in expansion of macro 'CORE_LOGF_X' + 960 | CORE_LOGF_X(4, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9214,10 +9557,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1041:9: note: in expansion of macro 'CORE_LOGF_X' - 1041 | CORE_LOGF_X(2, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:984:13: note: in expansion of macro 'CORE_LOGF_X' + 984 | CORE_LOGF_X(9, eLOG_Warning, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9230,9 +9573,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1204:21: note: in expansion of macro 'CORE_LOGF_X' - 1204 | CORE_LOGF_X(5, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' + 7512 | CORE_LOGF_X(68, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9245,9 +9589,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6752:9: note: in expansion of macro 'CORE_LOGF_X' - 6752 | CORE_LOGF_X(52, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1201:13: note: in expansion of macro 'CORE_LOGF_X' + 1201 | CORE_LOGF_X(6, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9260,9 +9604,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6762:9: note: in expansion of macro 'CORE_LOGF_X' - 6762 | CORE_LOGF_X(53, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c:1213:9: note: in expansion of macro 'CORE_LOGF_X' + 1213 | CORE_LOGF_X(10, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPassive': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9275,11 +9620,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6773:9: note: in expansion of macro 'CORE_LOGF_X' - 6773 | CORE_LOGF_X(51, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1041:9: note: in expansion of macro 'CORE_LOGF_X' + 1041 | CORE_LOGF_X(2, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Shutdown': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPollCntl': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPXfer': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9292,8 +9637,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1743:13: note: in expansion of macro 'CORE_LOGF_X' - 1743 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' + 7539 | CORE_LOGF_X(69, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9307,10 +9652,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6810:9: note: in expansion of macro 'CORE_LOGF_X' - 6810 | CORE_LOGF_X(54, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1204:21: note: in expansion of macro 'CORE_LOGF_X' + 1204 | CORE_LOGF_X(5, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9323,9 +9667,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2012:9: note: in expansion of macro 'CORE_LOGF_X' - 2012 | CORE_LOGF_X(13, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' + 7549 | CORE_LOGF_X(70, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 'x_FTPPollCntl': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9338,10 +9685,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6817:9: note: in expansion of macro 'CORE_LOGF_X' - 6817 | CORE_LOGF_X(55, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:1743:13: note: in expansion of macro 'CORE_LOGF_X' + 1743 | CORE_LOGF_X(12, xxx->data ? eLOG_Error : eLOG_Warning, + | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9354,11 +9703,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2088:17: note: in expansion of macro 'CORE_LOGF_X' - 2088 | CORE_LOGF_X(6, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' + 7568 | CORE_LOGF_X(71, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9371,21 +9718,28 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6825:9: note: in expansion of macro 'CORE_LOGF_X' - 6825 | CORE_LOGF_X(15, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2012:9: note: in expansion of macro 'CORE_LOGF_X' + 2012 | CORE_LOGF_X(13, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_VT_Write': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2088:17: note: in expansion of macro 'CORE_LOGF_X' + 2088 | CORE_LOGF_X(6, eLOG_Error, + | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Wait': -.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_connector.c -o ncbi_http_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_memory_connector.c -o ncbi_memory_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_connector.c -o ncbi_service_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c -o ncbi_ftp_connector.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_version.c -o ncbi_version.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/cmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9398,10 +9752,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6971:9: note: in expansion of macro 'CORE_LOGF_X' - 6971 | CORE_LOGF_X(56, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' + 7575 | CORE_LOGF_X(72, eLOG_Error, | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c: In function 's_CreateConnector': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -9418,8 +9771,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_ftp_connector.c:2417:9: note: in expansion of macro 'CORE_LOG' 2417 | CORE_LOG(eLOG_Critical, "fFTP_UseProxy not yet implemented"); | ^~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9432,24 +9788,65 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:6999:13: note: in expansion of macro 'CORE_LOGF_X' - 6999 | CORE_LOGF_X(57, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' + 7722 | CORE_LOGF_X(73, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' + 7784 | CORE_LOGF_X(158, eLOG_Warning, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' + 7791 | CORE_LOGF_X(159, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9462,9 +9859,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7013:13: note: in expansion of macro 'CORE_LOGF_X' - 7013 | CORE_LOGF_X(58, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' + 7826 | CORE_LOGF_X(156, eLOG_Warning, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9477,9 +9874,43 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7027:17: note: in expansion of macro 'CORE_LOGF_X' - 7027 | CORE_LOGF_X(59, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' + 7833 | CORE_LOGF_X(157, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsm.h:39, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:33: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -9500,9 +9931,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7036:17: note: in expansion of macro 'CORE_LOGF_X' - 7036 | CORE_LOGF_X(60, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8017:9: note: in expansion of macro 'CORE_LOGF_X' + 8017 | CORE_LOGF_X(79, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9515,9 +9946,45 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7046:13: note: in expansion of macro 'CORE_LOGF_X' - 7046 | CORE_LOGF_X(61, eLOG_Warning, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' + 8024 | CORE_LOGF_X(78, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8042 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE + | ^~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8058:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8058 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9530,10 +9997,12 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7056:9: note: in expansion of macro 'CORE_LOGF_X' - 7056 | CORE_LOGF_X(62, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8088:9: note: in expansion of macro 'CORE_LOGF_X' + 8088 | CORE_LOGF_X(82, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetTimeout': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9546,20 +10015,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7225:9: note: in expansion of macro 'CORE_LOGF_X' - 7225 | CORE_LOGF_X(63, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8095:9: note: in expansion of macro 'CORE_LOGF_X' + 8095 | CORE_LOGF_X(81, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetTimeout': -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3789770 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9572,10 +10030,41 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7266:9: note: in expansion of macro 'CORE_LOGF_X' - 7266 | CORE_LOGF_X(64, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' + 8114 | CORE_LOGF_X(83, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Read': +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8127:9: note: in expansion of macro 'CORE_LOGF_X' + 8127 | CORE_LOGF_X(84, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8156:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetHeapCopy': @@ -9594,6 +10083,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:444:13: note: in expansion of macro 'CORE_LOGF_X' 444 | CORE_LOGF_X(26, eLOG_Error, | ^~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9685,6 +10175,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:576:13: note: in expansion of macro 'CORE_LOGF_X' 576 | CORE_LOGF_X(30, eLOG_Error, | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8184:9: note: in expansion of macro 'CORE_LOGF_X' + 8184 | CORE_LOGF_X(96, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c: In function 's_GetNextInfo': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c:696:51: warning: taking address of packed member of 'struct ' may result in an unaligned pointer value [-Waddress-of-packed-member] 696 | || SERV_EqualInfo(skip, &svc->info))) { @@ -9710,9 +10215,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7308:13: note: in expansion of macro 'CORE_LOGF_X' - 7308 | CORE_LOGF_X(65, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8191:9: note: in expansion of macro 'CORE_LOGF_X' + 8191 | CORE_LOGF_X(95, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8244:9: note: in expansion of macro 'CORE_LOGF_X' + 8244 | CORE_LOGF_X(93, eLOG_Error, + | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8251:9: note: in expansion of macro 'CORE_LOGF_X' + 8251 | CORE_LOGF_X(92, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.h:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:36: @@ -9722,6 +10260,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8288:9: note: in expansion of macro 'CORE_LOGF_X' + 8288 | CORE_LOGF_X(87, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' + 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' + 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8295:9: note: in expansion of macro 'CORE_LOGF_X' + 8295 | CORE_LOGF_X(86, eLOG_Error, + | ^~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:38: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c: In function 's_Resolve': @@ -9756,6 +10324,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c:443:9: note: in expansion of macro 'CORE_LOGF' 443 | CORE_LOGF(eLOG_Trace, | ^~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9768,10 +10337,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7318:9: note: in expansion of macro 'CORE_LOGF_X' - 7318 | CORE_LOGF_X(66, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8327:9: note: in expansion of macro 'CORE_LOGF_X' + 8327 | CORE_LOGF_X(98, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_ReadLine': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9784,12 +10353,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7352:9: note: in expansion of macro 'CORE_LOGF_X' - 7352 | CORE_LOGF_X(125, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' + 8334 | CORE_LOGF_X(97, eLOG_Error, | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9802,10 +10368,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7405:21: note: in expansion of macro 'CORE_LOGF_X' - 7405 | CORE_LOGF_X(165, eLOG_Critical, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8354:9: note: in expansion of macro 'CORE_LOGF_X' + 8354 | CORE_LOGF_X(99, eLOG_Error, + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9818,11 +10384,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7422:21: note: in expansion of macro 'CORE_LOGF_X' - 7422 | CORE_LOGF_X(166, eLOG_Critical, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Pushback': -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8372:9: note: in expansion of macro 'CORE_LOGF_X' + 8372 | CORE_LOGF_X(101, eLOG_Error, + | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9835,25 +10399,50 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7455:9: note: in expansion of macro 'CORE_LOGF_X' - 7455 | CORE_LOGF_X(67, eLOG_Error, +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8379:9: note: in expansion of macro 'CORE_LOGF_X' + 8379 | CORE_LOGF_X(100, eLOG_Error, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Write': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7512:17: note: in expansion of macro 'CORE_LOGF_X' - 7512 | CORE_LOGF_X(68, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8399:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] + 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' + 224 | _mess.func = CORE_CURRENT_FUNCTION; \ + | ^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' + 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' + 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' + 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, + | ^~~~~~~~~~~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:36: @@ -9869,22 +10458,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7539:13: note: in expansion of macro 'CORE_LOGF_X' - 7539 | CORE_LOGF_X(69, eLOG_Error, - | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -9894,13 +10471,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' + 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7549:9: note: in expansion of macro 'CORE_LOGF_X' - 7549 | CORE_LOGF_X(70, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_Abort': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8985:17: note: in expansion of macro 'CORE_LOG_X' + 8985 | CORE_LOG_X(164, + | ^~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c: In function 's_Resolve': @@ -10283,184 +10862,20 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c:581:9: note: in expansion of macro 'CORE_LOGF_X' 581 | CORE_LOGF_X(eLSub_Message, eLOG_Trace, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7568:9: note: in expansion of macro 'CORE_LOGF_X' - 7568 | CORE_LOGF_X(71, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7575:9: note: in expansion of macro 'CORE_LOGF_X' - 7575 | CORE_LOGF_X(72, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_GetOSHandleEx': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7722:9: note: in expansion of macro 'CORE_LOGF_X' - 7722 | CORE_LOGF_X(73, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetCork': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7784:9: note: in expansion of macro 'CORE_LOGF_X' - 7784 | CORE_LOGF_X(158, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7791:9: note: in expansion of macro 'CORE_LOGF_X' - 7791 | CORE_LOGF_X(159, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7804:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7804 | CORE_LOGF_ERRNO_EXX(160, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_DisableOSSendDelay': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7826:9: note: in expansion of macro 'CORE_LOGF_X' - 7826 | CORE_LOGF_X(156, eLOG_Warning, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7833:9: note: in expansion of macro 'CORE_LOGF_X' - 7833 | CORE_LOGF_X(157, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7846:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7846 | CORE_LOGF_ERRNO_EXX(75, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_CreateEx': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:7897:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 7897 | CORE_LOGF_ERRNO_EXX(76, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lb.h:35, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] +++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wal/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:38, @@ -10469,22 +10884,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Bind': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8017:9: note: in expansion of macro 'CORE_LOGF_X' - 8017 | CORE_LOGF_X(79, eLOG_Error, - | ^~~~~~~~~~~ make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: @@ -10926,6 +11325,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:780:13: note: in expansion of macro 'CORE_LOGF_X' 780 | CORE_LOGF_X(eNSub_BadData, eLOG_Error, | ^~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -10941,21 +11341,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:795:13: note: in expansion of macro 'CORE_LOGF_X' 795 | CORE_LOGF_X(eNSub_Alloc, eLOG_Critical, | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8024:9: note: in expansion of macro 'CORE_LOGF_X' - 8024 | CORE_LOGF_X(78, eLOG_Error, - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c: In function 's_Resolve': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -11140,6 +11525,7 @@ 1203 | CORE_LOGF_X(eNSub_TooLong, eLOG_Error, | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c: In function 'x_SetupConnectionParams': +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -11296,37 +11682,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' 224 | _mess.func = CORE_CURRENT_FUNCTION; \ | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8042:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8042 | CORE_LOGF_ERRNO_EXX(80, error != SOCK_EADDRINUSE - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8058:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8058 | CORE_LOGF_ERRNO_EXX(114, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_Connect': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) | ^~~~~~~~~~~~~ @@ -11408,22 +11763,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8088:9: note: in expansion of macro 'CORE_LOGF_X' - 8088 | CORE_LOGF_X(82, eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1410:13: note: in expansion of macro 'CORE_LOGF_X' 1410 | CORE_LOGF_X(eNSub_BadData, eLOG_Error, | ^~~~~~~~~~~ @@ -11499,21 +11838,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8095:9: note: in expansion of macro 'CORE_LOGF_X' - 8095 | CORE_LOGF_X(81, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1469:9: note: in expansion of macro 'CORE_LOGF_X' 1469 | CORE_LOGF_X(eNSub_Alloc, eLOG_Critical, | ^~~~~~~~~~~ @@ -11590,172 +11914,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8114:9: note: in expansion of macro 'CORE_LOGF_X' - 8114 | CORE_LOGF_X(83, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8127:9: note: in expansion of macro 'CORE_LOGF_X' - 8127 | CORE_LOGF_X(84, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c:1551:9: note: in expansion of macro 'CORE_LOGF_X' 1551 | CORE_LOGF_X(eNSub_Message, eLOG_Trace, | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8156:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8156 | CORE_LOGF_ERRNO_EXX(85, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WaitMsg': -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8184:9: note: in expansion of macro 'CORE_LOGF_X' - 8184 | CORE_LOGF_X(96, eLOG_Error, - | ^~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8191:9: note: in expansion of macro 'CORE_LOGF_X' - 8191 | CORE_LOGF_X(95, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_RecvMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8244:9: note: in expansion of macro 'CORE_LOGF_X' - 8244 | CORE_LOGF_X(93, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8251:9: note: in expansion of macro 'CORE_LOGF_X' - 8251 | CORE_LOGF_X(92, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SendMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8288:9: note: in expansion of macro 'CORE_LOGF_X' - 8288 | CORE_LOGF_X(87, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8295:9: note: in expansion of macro 'CORE_LOGF_X' - 8295 | CORE_LOGF_X(86, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_WipeMsg': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8327:9: note: in expansion of macro 'CORE_LOGF_X' - 8327 | CORE_LOGF_X(98, eLOG_Error, - | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -11764,247 +11925,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8334:9: note: in expansion of macro 'CORE_LOGF_X' - 8334 | CORE_LOGF_X(97, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8354:9: note: in expansion of macro 'CORE_LOGF_X' - 8354 | CORE_LOGF_X(99, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'DSOCK_SetBroadcast': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8372:9: note: in expansion of macro 'CORE_LOGF_X' - 8372 | CORE_LOGF_X(101, eLOG_Error, - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:151:5: note: in expansion of macro 'DO_CORE_LOG' - 151 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8379:9: note: in expansion of macro 'CORE_LOGF_X' - 8379 | CORE_LOGF_X(100, eLOG_Error, - | ^~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8399:13: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8399 | CORE_LOGF_ERRNO_EXX(102, eLOG_Error, - | ^~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_iprange.c -o ncbi_iprange.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_local.c -o ncbi_local.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbsmd.c -o ncbi_lbsmd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_dispd.c -o ncbi_dispd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_linkerd.c -o ncbi_linkerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namerd.c -o ncbi_namerd.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wal/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetReuseAddress': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:243:5: note: in expansion of macro 'DO_CORE_LOG_X' - 243 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, error, descr, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:183:5: note: in expansion of macro 'DO_CORE_LOG_ERRNO' - 183 | DO_CORE_LOG_ERRNO(NCBI_C_ERRCODE_X, subcode, level, error, descr, \ - | ^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8570:9: note: in expansion of macro 'CORE_LOGF_ERRNO_EXX' - 8570 | CORE_LOGF_ERRNO_EXX(74, eLOG_Warning, - | ^~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c: In function 'SOCK_SetupSSLInternal': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] - 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ - | ^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' - 224 | _mess.func = CORE_CURRENT_FUNCTION; \ - | ^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:239:5: note: in expansion of macro 'DO_CORE_LOG_X' - 239 | DO_CORE_LOG_X(code, subcode, level, message, dynamic, 0, 0, 0, 0) - | ^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:147:5: note: in expansion of macro 'DO_CORE_LOG' - 147 | DO_CORE_LOG(NCBI_C_ERRCODE_X, subcode, level, \ - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket.c:8985:17: note: in expansion of macro 'CORE_LOG_X' - 8985 | CORE_LOG_X(164, - | ^~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:318:28: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd util/xregexp/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -cd serial/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=serial UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -j12 --jobserver-auth=fifo:/tmp/GMfifo3789763 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial TMPL=serial -j12 --jobserver-auth=fifo:/tmp/GMfifo3796798 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here - 1119 | string_len = strlen(string); - | ^~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdata.cpp -o hookdata.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/hookdatakey.cpp -o hookdatakey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeinfo.cpp -o typeinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectinfo.cpp -o objectinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectiter.cpp -o objectiter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objectio.cpp -o objectio.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' - -o lzo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zstd.cpp -o zstd.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:913:27: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 135 | strncpy(output_string, string, n); - | ^ -In function 'parson_strdup', - inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1213:32: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here - 140 | return parson_strndup(string, strlen(string)); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -12013,6 +11942,8 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ | ^~~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c: In function 'xx_LoadLocalIPs': @@ -12153,16 +12084,32 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c:342:5: note: in expansion of macro 'CORE_LOG' 342 | CORE_LOG(eLOG_Warning, "Using default local IPv4 specs"); | ^~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_object_add': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_object_add' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:318:28: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.h:37, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:35: @@ -12178,14 +12125,11 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiatomic.h:171:1: warning: no return statement in function returning non-void [-Wreturn-type] 171 | } | ^ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd cgi/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=cgi UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_once.h:40: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'x_DumpHdr': @@ -12281,7 +12225,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:345:13: note: in expansion of macro 'CORE_LOGF' 345 | CORE_LOGF(level, | ^~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'skip_rr': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -12853,6 +12796,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:840:17: note: in expansion of macro 'CORE_LOGF' 840 | CORE_LOGF(eLOG_Warning, | ^~~~~~~~~ +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -12974,7 +12918,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:944:9: note: in expansion of macro 'CORE_LOG' 944 | CORE_LOG(eLOG_Error, "DNS reply has no records"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] +l -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securi/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:224:33: note: in expansion of macro 'CORE_CURRENT_FUNCTION' @@ -13065,7 +13015,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1106:13: note: in expansion of macro 'CORE_LOGF' 1106 | CORE_LOGF(eLOG_Error, | ^~~~~~~~~ -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ | ^~~~~~~~~~~~~~~~~~~ @@ -13164,6 +13113,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1233:17: note: in expansion of macro 'CORE_LOGF' 1233 | CORE_LOGF(eLOG_Note, | ^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -j12 --jobserver-auth=fifo:/tmp/GMfifo821429 flag-stamps /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c: In function 'SERV_LBDNS_Open': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -13270,40 +13223,82 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c:1619:5: note: in expansion of macro 'CORE_LOGF' 1619 | CORE_LOGF(data->debug ? eLOG_Note : eLOG_Trace, | ^~~~~~~~~ -l -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c -o parson.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip.c -o ncbi_localip.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_lbdns.c -o ncbi_lbdns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_socket_cxx.cpp -o ncbi_socket_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_core_cxx.cpp -o ncbi_core_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/email_diag_handler.cpp -o email_diag_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-securimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi TMPL=cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo826150 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_cgi to make__cgi_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/.#lock-map. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -openmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeref.cpp -o typeref.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typemap.cpp -o typemap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_init_string': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1119:18: note: length computed here + 1119 | string_len = strlen(string); + | ^~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgi.cpp -o ncbicgi.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp.cpp -o cgiapp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgictx.cpp -o cgictx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbicgir.cpp -o ncbicgir.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ncbires.cpp -o ncbires.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/ref_args.cpp -o ref_args.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/re/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_parse_string_with_comments': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_parse_string_with_comments' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:913:27: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c: In function 'x_json_value_deep_copy': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:135:5: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 135 | strncpy(output_string, string, n); + | ^ +In function 'parson_strdup', + inlined from 'x_json_value_deep_copy' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:1213:32: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/parson.c:140:12: note: length computed here + 140 | return parson_strndup(string, strlen(string)); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +openmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typeref.cpp -o typeref.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/typemap.cpp -o typemap.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp -o stdtypes.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/enumerated.cpp -o enumerated.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/ptrinfo.cpp -o ptrinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/autoptrinfo.cpp -o autoptrinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protectionmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/message.cpp -o message.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.so .libxlogging.so.stamp @@ -13313,48 +13308,29 @@ /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd util/xregexp/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xregexp UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +/usr/bin/make[4] (Makefile.xregexp.lib): Nothing to be done for `all'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -ty -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secumake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13363,17 +13339,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile/rtprofile.cpp -o rtprofile.o -/bin/rm -f libutrtprof.so .libutrtprof.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libutrtprof.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC rtprofile.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libutrtprof.so -/bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13382,7 +13349,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13392,7 +13359,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps + -o lzo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zlib.cpp -o zlib.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/zstd.cpp -o zstd.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/reader_zlib.cpp -o reader_zlib.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/tar.cpp -o tar.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive.cpp -o archive.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_.cpp -o archive_.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/bumake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13402,7 +13377,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13412,7 +13387,13 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +ty -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_streambuf.cpp -o ncbi_conn_streambuf.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_stream.cpp -o ncbi_conn_stream.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_test.cpp -o ncbi_conn_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_misc.cpp -o ncbi_misc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe.cpp -o ncbi_namedpipe.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_namedpipe_connector.cpp -o ncbi_namedpipe_connector.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13422,8 +13403,6 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.so .libsequtil.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libsequtil.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread @@ -13432,6 +13411,8 @@ /bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sequtil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13440,8 +13421,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/profile/rtprofile.cpp -o rtprofile.o +/bin/rm -f libutrtprof.so .libutrtprof.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libutrtprof.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC rtprofile.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libutrtprof.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libutrtprof.so +/bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.utrtprof.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13450,15 +13440,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o +/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so +/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13466,7 +13459,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13476,17 +13469,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp: In static member function 'static void ncbi::CPrimitiveTypeFunctions::Skip(ncbi::CObjectIStream&, ncbi::TTypeInfo) [with T = long double]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: warning: 'data' may be used uninitialized [-Wmaybe-uninitialized] - 147 | in.SkipStd(data); - | ~~~~~~~~~~^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: note: by argument 2 of type 'const long double&' to 'void (ncbi::CObjectIStream::)(const long double&)' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:146:25: note: 'data' declared here - 146 | TObjectType data; - | ^~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +producible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_run.cpp -o cgi_run.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_util.cpp -o cgi_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_serial.cpp -o cgi_serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_session.cpp -o cgi_session.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_exception.cpp -o cgi_exception.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgiapp_cached.cpp -o cgiapp_cached.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-secumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13494,7 +13485,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13504,7 +13495,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13514,17 +13505,35 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe.cpp -o ncbi_pipe.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_pipe_connector.cpp -o ncbi_pipe_connector.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_conn_reader_writer.cpp -o ncbi_conn_reader_writer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_userhost.cpp -o ncbi_userhost.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http_session.cpp -o ncbi_http_session.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_monkey.cpp -o ncbi_monkey.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o +/bin/rm -f libgene_info.so .libgene_info.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so +/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' +cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo828682 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13534,15 +13543,31 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/continfo.cpp -o continfo.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stltypes.cpp -o stltypes.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberid.cpp -o memberid.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/memberlist.cpp -o memberlist.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/item.cpp -o item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfob.cpp -o classinfob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REEmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REE/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. + -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -peIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -13584,20 +13609,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c:911:5: note: in expansion of macro 'CORE_LOG_X' 911 | CORE_LOG_X(29, eLOG_Warning, "Unavailable feature GNUTLS"); | ^~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. - -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_service_cxx.cpp -o ncbi_service_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_localip_cxx.cpp -o ncbi_localip_cxx.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_blowfish.c -o ncbi_blowfish.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_usage_report.cpp -o ncbi_usage_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/connect_misc.cpp -o connect_misc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_gnutls.c -o ncbi_gnutls.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pemake[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:36: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] @@ -13655,6 +13666,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:378:13: note: in expansion of macro 'CORE_LOGF_X' 378 | CORE_LOGF_X(3, eLOG_Error, | ^~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 91 | fSERV_IncludePrivate = 0x80000000, + | ^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] + 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ + | ^~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c: In function 's_MbedTlsInit': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_util.h:166:34: warning: ISO C does not support '__PRETTY_FUNCTION__' predefined identifier [-Wpedantic] 166 | # define CORE_CURRENT_FUNCTION __PRETTY_FUNCTION__ @@ -13748,16 +13769,9 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c:1003:9: note: in expansion of macro 'CORE_LOG_ERRNO_EXX' 1003 | CORE_LOG_ERRNO_EXX(12, eLOG_Error, err, errbuf, | ^~~~~~~~~~~~~~~~~~ -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_servicep.h:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 91 | fSERV_IncludePrivate = 0x80000000, - | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:92:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] - 92 | fSERV_Promiscuous = 0xF8000000 /**< Evrthng and the kitchen sink */ - | ^~~~~~~~~~ +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_priv.h:62, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c: In function 's_NoTlsInit': @@ -13886,6 +13900,11 @@ 212 | CORE_LOGF_X(47, eLOG_Error, | ^~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -13893,7 +13912,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13903,7 +13922,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13913,7 +13932,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13923,7 +13942,15 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp: In static member function 'static void ncbi::CPrimitiveTypeFunctions::Skip(ncbi::CObjectIStream&, ncbi::TTypeInfo) [with T = long double]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: warning: 'data' may be used uninitialized [-Wmaybe-uninitialized] + 147 | in.SkipStd(data); + | ~~~~~~~~~~^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:147:23: note: by argument 2 of type 'const long double&' to 'void (ncbi::CObjectIStream::)(const long double&)' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/stdtypes.cpp:146:25: note: 'data' declared here + 146 | TObjectType data; + | ^~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13933,26 +13960,23 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/db/sqlite/sqlitewrapp.cpp -o sqlitewrapp.o -/bin/rm -f libsqlitewrapp.so .libsqlitewrapp.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsqlitewrapp.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sqlitewrapp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsqlite3 -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsqlitewrapp.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsqlitewrapp.so -/bin/ln -f .sqlitewrapp.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sqlitewrapp.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13962,7 +13986,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -13972,39 +13996,27 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info.cpp -o gene_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/gene_info_reader.cpp -o gene_info_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o -/bin/rm -f libgene_info.so .libgene_info.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgene_info.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gene_info.o gene_info_reader.o file_utils.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgene_info.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgene_info.so -/bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gene_info.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' -cd objtools/blast/gene_info_reader/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=gene_info_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test TMPL=gene_info_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3810604 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -14014,7 +14026,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -14024,13 +14036,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -NTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/member.cpp -o member.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/classinfo.cpp -o classinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/variant.cpp -o variant.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choice.cpp -o choice.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/choiceptr.cpp -o choiceptr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/aliasinfo.cpp -o aliasinfo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -14040,7 +14046,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -14050,10 +14056,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3789343 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/components.cpp -o components.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/commentdiag.cpp -o commentdiag.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/html/indentstream.cpp -o indentstream.o @@ -14066,6 +14070,38 @@ /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo821046 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +-2.16.0+ds/c++/src/serial/objistr.cpp -o objistr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostr.cpp -o objostr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objcopy.cpp -o objcopy.o @@ -14079,16 +14115,20 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objstack.cpp -o objstack.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasn.cpp -o objostrasn.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasn.cpp -o objistrasn.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standarrity -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o -/bin/rm -f libxcgi.so .libxcgi.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so -/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -dantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standarmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' +d -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/buildantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_mbedtls.c -o ncbi_mbedtls.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_tls.c -o ncbi_tls.o /bin/rm -f libxconnect.so .libxconnect.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxconnect.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_lbsm.o ncbi_lbsm_ipc.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_lbsmd.o ncbi_dispd.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread @@ -14097,50 +14137,64 @@ /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd algo/blast/core/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null -cd connect/ext/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/core/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xthrserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd connect/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xxconnect2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd connect/ext/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xconnext UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3823914 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3823905 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -j12 --jobserver-auth=fifo:/tmp/GMfifo3823910 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo833005 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xthrserv -j12 --jobserver-auth=fifo:/tmp/GMfifo833006 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect TMPL=xxconnect2 -j12 --jobserver-auth=fifo:/tmp/GMfifo833010 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -j12 --jobserver-auth=fifo:/tmp/GMfifo833016 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext TMPL=xconnext -j12 --jobserver-auth=fifo:/tmp/GMfifo3823925 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_xconnext to make__ext_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/.#lock-map. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 491 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 751 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] + 758 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); + | ^ make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c -o aa_ungapped.o @@ -14148,12 +14202,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_engine.c -o blast_engine.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_extend.c -o blast_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_filter.c -o blast_filter.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blasIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -WerrIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/../ncbi_servicep.h:38, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c:39: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/ncbi_service.h:91:31: warning: ISO C restricts enumerator values to range of 'int' before C23 [-Wpedantic] 91 | fSERV_IncludePrivate = 0x80000000, @@ -14251,20 +14300,15 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c:253:13: note: in expansion of macro 'CORE_LOG' 253 | CORE_LOG(eLOG_Trace, "[CRYPT_Decode] Corrupt ciphertext"); | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_TwoHit': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:484:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 484 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:491:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 491 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c: In function 's_BlastAaWordFinder_OneHit': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:751:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 751 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/aa_ungapped.c:758:19: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] - 758 | scansub = (TAaScanSubjectFunction)(lookup->scansub_callback); - | ^ +or=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_gapalign.c -o blast_gapalign.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hits.c -o blast_hits.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream.c -o blast_hspstream.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_itree.c -o blast_itree.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c -o blast_kappa.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_lookup.c -o blas/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] + 3003 | Blast_ForbiddenRanges forbidden = {0,}; + | ^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c: In function 'BlastChooseProteinScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:559:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 559 | lut->scansub_callback = (void *)s_BlastAaScanSubject; @@ -14275,22 +14319,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c:567:33: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 567 | lut->scansub_callback = (void *)s_BlastCompressedAaScanSubject; | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c: In function 'Blast_RedoAlignmentCore_MT': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_kappa.c:3003:27: warning: unused variable 'forbidden' [-Wunused-variable] - 3003 | Blast_ForbiddenRanges forbidden = {0,}; - | ^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] - 2236 | lookup->hash_callback = FNV_hash; - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] - 2296 | lookup->hash_callback, - | ~~~~~~^~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' - 181 | TNaLookupHashFunction hash_func, - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c: In function 's_NaChooseScanSubject': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:291:36: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 291 | lookup->scansub_callback = (void *)s_BlastNaScanSubject_8_4; @@ -14417,13 +14445,29 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c:3006:12: warning: ISO C forbids conversion of function pointer to object pointer type [-Wpedantic] 3006 | return (void *)s_MBScanSubject_Any; | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c: In function 'BlastNaHashLookupTableNew': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2236:27: warning: ISO C forbids assignment between function pointer and 'void *' [-Wpedantic] + 2236 | lookup->hash_callback = FNV_hash; + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:2296:49: warning: ISO C forbids passing argument 8 of 'BlastHashLookupIndexQueryExactMatches' between function pointer and 'void *' [-Wpedantic] + 2296 | lookup->hash_callback, + | ~~~~~~^~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_nalookup.h:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c:31: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/core/blast_lookup.h:181:66: note: expected 'TNaLookupHashFunction' {aka 'unsigned int (*)(unsigned char *, unsigned int)'} but argument is of type 'void *' + 181 | TNaLookupHashFunction hash_func, + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ t_lookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aalookup.c -o blast_aalookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_aascan.c -o blast_aascan.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nalookup.c -o blast_nalookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_nascan.c -o blast_nascan.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_message.c -o blast_message.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_S/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_S/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c:1330:13: warning: unused variable 'bytes_written' [-Wunused-variable] + 1330 | int bytes_written = snprintf(buffer, DIM(buffer), + | ^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c: In function 's_IsSeedMasked': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c:488:15: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 488 | return !(((T_Lookup_Callback)(lookup_wrap->lookup_callback)) | ^ @@ -14513,10 +14557,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c:2188:9: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 2188 | (T_MB_IdbCheckOid)lookup_wrap->check_index_oid; | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c: In function 'LookupTableOptionsValidate': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_options.c:1330:13: warning: unused variable 'bytes_written' [-Wunused-variable] - 1330 | int bytes_written = snprintf(buffer, DIM(buffer), - | ^~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/na_ungapped.c:2190:25: warning: ISO C forbids conversion of object pointer to function pointer type [-Wpedantic] 2190 | (T_MB_IdbGetResults)lookup_wrap->read_indexed_db; | ^ @@ -14526,49 +14566,65 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_psi_priv.c -o blast_psi_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seg.c -o blast_seg.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_seqsrc.c -o blast_seqsrc.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Wd -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrasnb.cpp -o objostrasnb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrasnb.cpp -o objistrasnb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrxml.cpp -o objostrxml.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrxml.cpp -o objistrxml.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objostrjson.cpp -o objostrjson.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/objistrjson.cpp -o objistrjson.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/builerror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c -o blast_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c: In function 'BlastProgram2Number': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:306:10: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 306 | else if (strcasecmp("mapper", program) == 0) | ^~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c:309:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 309 | return 0; | ^~~~~~ +error=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_setup.c -o blast_setup.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c -o blast_stat.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback.c -o blast_traceback.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_util.c -o blast_util.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/gapinfo.c -o gapinfo.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-prity -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/cgi_entry_reader.cpp -o cgi_entry_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/cgi/user_agent.cpp -o user_agent.o +/bin/rm -f libxcgi.so .libxcgi.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcgi.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcgi.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcgi.so +/bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcgi.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' ath/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/greedy_align.c -o greedy_align.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_collector.c -o hspfilter_collector.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_besthit.c -o hspfilter_besthit.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_culling.c -o hspfilter_culling.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/link_hsps.c -o link_hsps.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_util.c -o lookup_util.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c: In function 'Blast_ScoreBlkMatrixFill': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1645:17: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] - 1645 | strncpy(full_matrix_path, matrix_path, path_len); - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1638:35: note: length computed here - 1638 | size_t path_len = strlen(matrix_path); - | ^~~~~~~~~~~~~~~~~~~ -.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/lookup_wrap.c -o lookup_wrap.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/matrix_freq_ratios.c -o matrix_freq_ratios.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/ncbi_std.c -o ncbi_std.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/ncbi_math.c -o ncbi_math.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_encoding.c -o blast_encoding.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/pattern.c -o pattern.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2./build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] + 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING + | ^ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:33: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here + 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer + | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:52:22: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] + 52 | CThreadedServer& m_Server; // NCBI_FAKE_WARNING + | ^~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here + 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer + | ^~~~~~~~~~~~~~~ +16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/pattern.c -o pattern.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_extend.c -o phi_extend.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_gapalign.c -o phi_gapalign.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c -o phi_lookup.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_parameters.c -o blast_parameters.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_posit.c -o blast_posit.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c: In function 'Blast_ScoreBlkMatrixFill': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1645:17: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] + 1645 | strncpy(full_matrix_path, matrix_path, path_len); + | ^ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_stat.c:1638:35: note: length computed here + 1638 | size_t path_len = strlen(matrix_path); + | ^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c: In function 'SPHIPatternSearchBlkNew': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/phi_lookup.c:635:30: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 635 | localPattern[posIndex-1] = 1; | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ @@ -14590,27 +14646,19 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_traceback_mt_priv.c -o blast_traceback_mt_priv.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/blast_hspstream_mt_utils.c -o blast_hspstream_mt_utils.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/boost_erf.c -o boost_erf.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:47:54: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] - 47 | CSocketRequest(CThreadedServer& server, SOCK sock) // NCBI_FAKE_WARNING - | ^ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:33: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here - 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer - | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp:52:22: warning: 'CThreadedServer' is deprecated [-Wdeprecated-declarations] - 52 | CThreadedServer& m_Server; // NCBI_FAKE_WARNING - | ^~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/connect/threaded_server.hpp:77:44: note: declared here - 77 | NCBI_DEPRECATED_CLASS NCBI_XCONNECT_EXPORT CThreadedServer - | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/unit_test/gene_info_test.cpp -o gene_info_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lgene_info -lxncbi -lm -lpthread -o gene_info_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c -o ncbi_dblb.o +/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o +/bin/rm -f libxconnext.so .libxconnext.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnext.so +/bin/ln -f .xconnext.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnext.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' edantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/jumper.c -o jumper.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/hspfilter_mapper.c -o hspfilter_mapper.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/core/spliced_hits.c -o spliced_hits.o @@ -14621,14 +14669,15 @@ /bin/ln -f .blast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_ifconf.c -o ncbi_ifconf.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_crypt.c -o ncbi_crypt.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb.c -o ncbi_dblb.o -/usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wall -pedantic -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_localnet.c -o ncbi_localnet.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ext/ncbi_dblb_svcmapper.cpp -o ncbi_dblb_svcmapper.o -/bin/rm -f libxconnext.so .libxconnext.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnext.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -Wl,--as-needed -fPIC ncbi_ifconf.o ncbi_crypt.o ncbi_dblb.o ncbi_localnet.o ncbi_dblb_svcmapper.o -Wl,-rpath-link,/bumake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +ild/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o +/bin/rm -f libxcompress.so .libxcompress.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lzstd -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so +/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/threaded_server.cpp -o threaded_server.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/server.cpp -o server.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/server_monitor.cpp -o server_monitor.o @@ -14640,7 +14689,7 @@ /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -cd connect/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null +cd connect/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xconnserv UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' @@ -14649,7 +14698,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -j12 --jobserver-auth=fifo:/tmp/GMfifo3834917 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services TMPL=xconnserv -j12 --jobserver-auth=fifo:/tmp/GMfifo835633 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_worker.cpp -o grid_worker.o @@ -14657,32 +14706,18 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_worker_app.cpp -o grid_worker_app.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_client.cpp -o grid_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_client_app.cpp -o grid_client_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnext.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnext.so -/bin/ln -f .xconnext.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnext.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' -/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_commit_thread.cpp -o wn_commit_thread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_main_loop.cpp -o wn_main_loop.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_cleanup.cpp -o wn_cleanup.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/wn_offline_mode.cpp -o wn_offline_mode.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_control_thread.cpp -o grid_control_thread.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_globals.cpp -o grid_globals.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridild/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o -/bin/rm -f libxcompress.so .libxcompress.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxcompress.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxutil -lxncbi -lbz2 -lz -lzstd -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxcompress.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxcompress.so -/bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcompress.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/grid_rw_impl.cpp -o gridmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_uv_nghttp2.cpp -o ncbi_uv_nghttp2.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/ncbi_http2_session.cpp -o ncbi_http2_session.o /bin/rm -f libxxconnect2.a .libxxconnect2.a.stamp -/bin/rm -f libxxconnect2.so .libxxconnect2.so.stamp ar cr libxxconnect2.a ncbi_uv_nghttp2.o ncbi_http2_session.o +/bin/rm -f libxxconnect2.so .libxxconnect2.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lxncbi -luv -lnghttp2 -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libxxconnect2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ncbi_uv_nghttp2.o ncbi_http2_session.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -luv -lnghttp2 -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxxconnect2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxxconnect2.a @@ -14692,14 +14727,7 @@ /bin/ln -f .xxconnect2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xxconnect2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -_rw_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_api.cpp -o netservice_api.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_submitter.cpp -o netschedule_api_submitter.o -/usr/bin/gd/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serializable.cpp -o serializable.o +d/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serializable.cpp -o serializable.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/serialobject.cpp -o serialobject.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/pathhook.cpp -o pathhook.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/rpcbase.cpp -o rpcbase.o @@ -14710,7 +14738,7 @@ /bin/ln -f .xser.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -cd serial/datatool/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd serial/datatool/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=datatool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' @@ -14719,7 +14747,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo3842787 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool TMPL=datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo837488 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/datatool.cpp -o datatool.o @@ -14733,129 +14761,124 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/choicetype.cpp -o choicetype.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/typestr.cpp -o typestr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/ptrstr.cpp -o ptrstr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_executor.cpp -o netschedule_api_executor.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_reader.cpp -o netschedule_api_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_admin.cpp -o netschedule_api_admin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_getjob.cpp -o netschedule_api_getjob.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_key.cpp -o netschedule_key.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_expt.cpp -o -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/stdstr.cpp -o stdstr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/incmake[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +_rw_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/remote_app.cpp -o remote_app.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/srv_connections.cpp -o srv_connections.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netservice_params.cpp -o netservice_params.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api.cpp -o netschedule_api.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. 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-D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/wsdlstr.cpp -o wsdlstr.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/jsdlexer.cpp -o jsdlexer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/jsdparser.cpp -o jsdparser.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_pattern_match_callback.cpp -o traversal_pattern_match_callback.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_code_generator.cpp -o traversal_code_generator.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_merger.cpp -o traversal_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o -/bin/rm -f libxconnserv.so .libxconnserv.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so -/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/refix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorageobjectloc.cpp -o netstorageobjectloc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorageobjectinfo.cpp -o netstorageobjectinfo.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netstorage_direct_nc.cpp -o netstorage_direct_nc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/ns_output_parser.cpp -o ns_output_parser.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/ns_job_serializer.cpp -o ns_job_serializer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id.cpp -o compound_id.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-madpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f datatool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' -cd objects/general/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd objects/biblio/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd objects/medline/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd objects/general/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd objects/biblio/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/medline/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/pub/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd objects/pub/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqcode/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh general all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all -cd objects/seq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/seqcode/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh biblio all +cd objects/seq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/seqset/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medline all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pub all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all -cd objects/seqset/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd objects/scoremat/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/scoremat/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqcode all +cd objects/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd objects/genomecoll/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd objects/genomecoll/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqedit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blast all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastdb all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh genome_collection all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh scoremat all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqset all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' @@ -14864,25 +14887,46 @@ make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -j12 --jobserver-auth=fifo:/tmp/GMfifo850017 all +make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/Makefile.sources builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3861883 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849781 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ + -oc general -or objects/general -odi -od general.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861627 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849853 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqcode.asn -M "" -oA \ - -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ + -oc blast -or objects/blast -odi -od blast.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861655 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849849 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=scoremat MODULE_PATH=objects/scoremat MODULE_ASN=scoremat.asn MODULE_IMPORT='objects/seqset/seqset objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/seqset/seqset.asn objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m scoremat.asn -M "objects/seqset/seqset.asn objects/general/general.asn" -oA \ @@ -14891,104 +14935,67 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861616 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ - -oc medline -or objects/medline -odi -od medline.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861659 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blast MODULE_PATH=objects/blast MODULE_ASN=blast.asn MODULE_IMPORT='objects/scoremat/scoremat objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc objects/seqalign/seqalign' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn' IMPFILES='objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849815 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqcode MODULE_PATH=objects/seqcode MODULE_ASN=seqcode.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blast.asn -M "objects/scoremat/scoremat.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn objects/seqalign/seqalign.asn" -oA \ - -oc blast -or objects/blast -odi -od blast.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blast.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqcode.asn -M "" -oA \ + -oc seqcode -or objects/seqcode -odi -od seqcode.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqcode.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861678 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ - -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861664 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849789 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medline MODULE_PATH=objects/medline MODULE_ASN=medline.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ - -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medline.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ + -oc medline -or objects/medline -odi -od medline.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd medline.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861608 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=general MODULE_PATH=objects/general MODULE_ASN=general.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849784 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m general.asn -M "" -oA \ - -oc general -or objects/general -odi -od general.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd general.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ + -oc biblio -or objects/biblio -odi -od biblio.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861620 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849799 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pub MODULE_PATH=objects/pub MODULE_ASN=pub.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pub.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ @@ -14997,9 +15004,28 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861662 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849869 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastdb MODULE_PATH=objects/blastdb MODULE_ASN=blastdb.asn MODULE_IMPORT='objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastdb.asn -M "objects/seqloc/seqloc.asn" -oA \ @@ -15008,240 +15034,140 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb' -/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861646 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849874 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=genome_collection MODULE_PATH=objects/genomecoll MODULE_ASN=genome_collection.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqfeat/seqfeat objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ - -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m genome_collection.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqfeat/seqfeat.asn objects/seq/seq.asn" -oA \ + -oc genome_collection -or objects/genomecoll -odi -od genome_collection.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd genome_collection.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gencoll_client all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.scoremat.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -j12 --jobserver-auth=fifo:/tmp/GMfifo849781 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' /usr/bin/make[4] (Makefile.blast.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lockmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +/usr/bin/make[4] (Makefile.seqcode.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +/usr/bin/make[4] (Makefile.medline.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861610 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=biblio MODULE_PATH=objects/biblio MODULE_ASN=biblio.asn MODULE_IMPORT='objects/general/general' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn' IMPFILES='objects/general/general.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849833 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqset MODULE_PATH=objects/seqset MODULE_ASN=seqset.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m biblio.asn -M "objects/general/general.asn" -oA \ - -oc biblio -or objects/biblio -odi -od biblio.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd biblio.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqset.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seq/seq.asn" -oA \ + -oc seqset -or objects/seqset -odi -od seqset.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqset.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio' -/usr/bin/make[4] (Makefile.general.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo3861627 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo3861655 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' /usr/bin/make[4] (Makefile.biblio.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.pub.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset' +/usr/bin/make[4] (Makefile.blastdb.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -j12 --jobserver-auth=fifo:/tmp/GMfifo3861616 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo3861646 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3861662 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo3861678 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -j12 --jobserver-auth=fifo:/tmp/GMfifo3861608 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3861659 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqsplit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -j12 --jobserver-auth=fifo:/tmp/GMfifo3861620 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo3861610 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/submit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/variation/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -cd objects/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -cd objects/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -cd objects/taxon1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -cd objects/blastxml/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +/usr/bin/make[4] (Makefile.xnetblastcli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -cd objects/blastxml2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objects/pubmed/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +/usr/bin/make[4] (Makefile.seqset.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo849849 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +cd objects/seqedit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -j12 --jobserver-auth=fifo:/tmp/GMfifo849799 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo849869 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo849815 flag-stamps +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqedit all make[7]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -j12 --jobserver-auth=fifo:/tmp/GMfifo849789 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo849784 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' status=0 ; \ -MAKE="/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125"; \ +MAKE="/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243"; \ export MAKE; \ for x in seqalign seqblock seqfeat seqloc seqres seqtable; do \ d=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../$x ; \ @@ -15252,7 +15178,7 @@ echo "#include \"../$x/${x}___.cpp\"" > ${x}___.cpp ; \ done ; \ exit $status -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqalign MODULE_PATH=objects/seqalign MODULE_ASN=seqalign.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqalign.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -15261,7 +15187,7 @@ datatool: 2.23.2 make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqblock MODULE_PATH=objects/seqblock MODULE_ASN=seqblock.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqblock.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ @@ -15269,26 +15195,92 @@ -ocvs -pch 'ncbi_pch.hpp' -fd seqblock.dump \ datatool: 2.23.2 -make[7]: Leaving dicd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all +make[7]: Leaving direcmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo849853 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +cd objects/seqsplit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo849833 flag-stamps +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/submit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +cd objects/variation/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seqsplit all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +cd objects/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862800 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +cd objects/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' +cd objects/taxon1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh submit all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh variation all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id1 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon1 all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh id2 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +cd objects/blastxml/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml all +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851008 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqedit MODULE_PATH=objects/seqedit MODULE_ASN=seqedit.asn MODULE_IMPORT='objects/general/general objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn' IMPFILES='objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ - -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqedit.asn -M "objects/general/general.asn objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn" -oA \ + -oc seqedit -or objects/seqedit -odi -od seqedit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqedit.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -j12 --jobserver-auth=fifo:/tmp/GMfifo3861659 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862889 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851272 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=submit MODULE_PATH=objects/submit MODULE_ASN=submit.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seq/seq objects/seqset/seqset objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m submit.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seq/seq.asn objects/seqset/seqset.asn objects/seqloc/seqloc.asn" -oA \ @@ -15297,53 +15289,70 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -File blastxml2.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863127 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851246 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqsplit MODULE_PATH=objects/seqsplit MODULE_ASN=seqsplit.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq objects/seqalign/seqalign objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml2.asn -M "" -oA \ - -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqsplit.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn" -oA \ + -oc seqsplit -or objects/seqsplit -odi -od seqsplit.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqsplit.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -j12 --jobserver-auth=fifo:/tmp/GMfifo849853 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqedit.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851288 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ + -oc variation -or objects/variation -odi -od variation.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862976 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +File blastxml.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851463 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml.asn -M "" -oA \ + -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851308 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id1 MODULE_PATH=objects/id1 MODULE_ASN=id1.asn MODULE_IMPORT='objects/seqloc/seqloc objects/seqset/seqset objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id1.asn -M "objects/seqloc/seqloc.asn objects/seqset/seqset.asn objects/seq/seq.asn" -oA \ @@ -15352,9 +15361,7 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863008 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851333 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=id2 MODULE_PATH=objects/id2 MODULE_ASN=id2.asn MODULE_IMPORT='objects/seqsplit/seqsplit objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m id2.asn -M "objects/seqsplit/seqsplit.asn objects/seqloc/seqloc.asn" -oA \ @@ -15363,10 +15370,15 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863028 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo851345 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon1 MODULE_PATH=objects/taxon1 MODULE_ASN=taxon1.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon1.asn -M "objects/seqfeat/seqfeat.asn" -oA \ @@ -15375,237 +15387,234 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862937 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=variation MODULE_PATH=objects/variation MODULE_ASN=variation.asn MODULE_IMPORT='objects/seqfeat/seqfeat objects/general/general objects/seqloc/seqloc objects/pub/pub objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m variation.asn -M "objects/seqfeat/seqfeat.asn objects/general/general.asn objects/seqloc/seqloc.asn objects/pub/pub.asn objects/seq/seq.asn" -oA \ - -oc variation -or objects/variation -odi -od variation.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd variation.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2' -/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' -/usr/bin/make[4] (Makefile.submit.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.seqsplit.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863134 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ - -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -File blastxml.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863098 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml MODULE_PATH=objects/blastxml MODULE_ASN=blastxml.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml.asn -M "" -oA \ - -oc blastxml -or objects/blastxml -odi -od blastxml.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd blastxml.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml' -/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo851008 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.id2.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo3862800 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.id1.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/make[4] (Makefile.variation.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3863127 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -j12 --jobserver-auth=fifo:/tmp/GMfifo3862889 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -j12 --jobserver-auth=fifo:/tmp/GMfifo851272 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo851246 flag-stamps /usr/bin/make[4] (Makefile.id2cli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make[4] (Makefile.id1cli.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objects/blastxml2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo851463 flag-stamps +cd objects/pubmed/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -cd objtools/eutils/efetch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.taxon1.lib): Nothing to be done for `export-headers'. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh blastxml2 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -j12 --jobserver-auth=fifo:/tmp/GMfifo3862937 flag-stamps +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh pubmed all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -j12 --jobserver-auth=fifo:/tmp/GMfifo851288 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make[4] (Makefile.blastxml.lib): Nothing to be done for `export-headers'. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -cd objtools/eutils/egquery/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +cd objtools/eutils/efetch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +cd objtools/eutils/egquery/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objtools/eutils/ehistory/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --xsd efetch all make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd egquery all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo851333 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +cd objtools/eutils/ehistory/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo851308 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.local_taxon.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3863008 flag-stamps -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo3863134 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objtools/eutils/einfo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3862976 flag-stamps +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd ehistory all +tory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA \ + -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump \ + +datatool: 2.23.2 +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA \ + -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump \ + +datatool: 2.23.2 +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[7]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +cd objtools/eutils/einfo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo851345 flag-stamps make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd einfo all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +File blastxml2.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852414 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=blastxml2 MODULE_PATH=objects/blastxml2 MODULE_ASN=blastxml2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m blastxml2.asn -M "" -oA \ + -oc blastxml2 -or objects/blastxml2 -odi -od blastxml2.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd blastxml2.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo3863098 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -cd objtools/eutils/elink/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3863028 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -cd objtools/eutils/epost/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources File egquery.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864034 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=egquery MODULE_PATH=objtools/eutils/egquery MODULE_ASN=egquery.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852587 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=egquery MODULE_PATH=objtools/eutils/egquery MODULE_ASN=egquery.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m egquery.dtd -M "" -oA \ @@ -15614,24 +15623,42 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3863008 flag-stamps -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852431 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=pubmed MODULE_PATH=objects/pubmed MODULE_ASN=pubmed.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m pubmed.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn" -oA \ + -oc pubmed -or objects/pubmed -odi -od pubmed.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd pubmed.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make[4] (Makefile.blastxml2.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all File ehistory.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864056 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852718 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=ehistory MODULE_PATH=objtools/eutils/ehistory MODULE_ASN=ehistory.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m ehistory.dtd -M "" -oA \ @@ -15640,36 +15667,26 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo851333 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. -/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. File einfo.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864196 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852839 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=einfo MODULE_PATH=objtools/eutils/einfo MODULE_ASN=einfo.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m einfo.dtd -M "" -oA \ @@ -15680,27 +15697,151 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -j12 --jobserver-auth=fifo:/tmp/GMfifo851345 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/make[4] (Makefile.pubmed.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.egquery.lib): Nothing to be done for `export-headers'. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -j12 --jobserver-auth=fifo:/tmp/GMfifo851308 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3862976 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ + +datatool: 2.23.2 +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo850243 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src +make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ + -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ + +datatool: 2.23.2 +make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' +make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +/usr/bin/make[4] (Makefile.ehistory.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo852414 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +cd objtools/eutils/elink/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo852587 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo852431 flag-stamps +/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd elink all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo852718 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh entrez2 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +cd objtools/eutils/epost/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +cd objtools/eutils/esearch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +p=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/compound_id_v0.cpp -o compound_id_v0.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o +/bin/rm -f libxconnserv.so .libxconnserv.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxconnserv.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxthrserv -lxconnect -lxutil -lxncbi -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxconnserv.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxconnserv.so +/bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xconnserv.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd epost all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo852839 flag-stamps +cd objtools/eutils/espell/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +cd objtools/eutils/esummary/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/eutils/uilist/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +cd objects/gbseq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849821 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ + -oc seq -or objects/seq -odi -od seq.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' File elink.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864329 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo853638 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=elink MODULE_PATH=objtools/eutils/elink MODULE_ASN=elink.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m elink.dtd -M "" -oA \ @@ -15709,28 +15850,47 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +cd objects/medlars/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=local_taxon -j12 --jobserver-auth=fifo:/tmp/GMfifo3863028 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo3864056 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo3864034 flag-stamps -/usr/bin/make[4] (Makefile.einfo.lib): Nothing to be done for `export-headers'. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medlars all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +File efetch.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo852548 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ + -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864513 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo853867 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=entrez2 MODULE_PATH=objects/entrez2 MODULE_ASN=entrez2.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m entrez2.asn -M "" -oA \ @@ -15739,11 +15899,27 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. File epost.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3864537 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo853938 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=epost MODULE_PATH=objtools/eutils/epost MODULE_ASN=epost.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m epost.dtd -M "" -oA \ @@ -15752,162 +15928,136 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2' -/usr/bin/make[4] (Makefile.elink.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +File esearch.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo853942 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ + -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -cd objtools/eutils/esearch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esearch all -/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. -rectory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqfeat MODULE_PATH=objects/seqfeat MODULE_ASN=seqfeat.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/pub/pub objects/seqloc/seqloc objects/seq/seq' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +File esummary.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854060 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqfeat.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/pub/pub.asn objects/seqloc/seqloc.asn objects/seq/seq.asn" -oA \ - -oc seqfeat -or objects/seqfeat -odi -od seqfeat.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqfeat.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esummary.dtd -M "" -oA \ + -oc esummary -or objtools/eutils/esummary -odi -od esummary.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd esummary.dump \ datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqloc MODULE_PATH=objects/seqloc MODULE_ASN=seqloc.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' +File espell.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854052 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqloc.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/seqfeat/seqfeat.asn" -oA \ - -oc seqloc -or objects/seqloc -odi -od seqloc.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqloc.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m espell.dtd -M "" -oA \ + -oc espell -or objtools/eutils/espell -odi -od espell.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd espell.dump \ datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqres MODULE_PATH=objects/seqres MODULE_ASN=seqres.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/medline/medline objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproduciblemake[7]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo3864196 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -j12 --jobserver-auth=fifo:/tmp/GMfifo3864329 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -cd objtools/eutils/espell/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +File uilist.module not found. Using defaults... +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854068 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ + -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' +/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd espell all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -j12 --jobserver-auth=fifo:/tmp/GMfifo849821 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.entrez2.lib): Nothing to be done for `export-headers'. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd objtools/eutils/esummary/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd esummary all -cd objtools/eutils/uilist/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/gbseq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -j12 --jobserver-auth=fifo:/tmp/GMfifo3864537 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh --dtd uilist all -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh gbseq all -cd objects/medlars/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh medlars all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all -make[7]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -j12 --jobserver-auth=fifo:/tmp/GMfifo853638 flag-stamps +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +/usr/bin/make[4] (Makefile.epost.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3864513 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -cd objects/taxon3/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -File espell.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865259 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=espell MODULE_PATH=objtools/eutils/espell MODULE_ASN=espell.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m espell.dtd -M "" -oA \ - -oc espell -or objtools/eutils/espell -odi -od espell.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd espell.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865383 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854130 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gbseq MODULE_PATH=objects/gbseq MODULE_ASN=gbseq.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gbseq.asn -M "" -oA \ @@ -15916,113 +16066,62 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. +/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' -File esearch.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865168 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esearch MODULE_PATH=objtools/eutils/esearch MODULE_ASN=esearch.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esearch.dtd -M "" -oA \ - -oc esearch -or objtools/eutils/esearch -odi -od esearch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd esearch.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch' -/usr/bin/make[4] (Makefile.espell.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' --path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqres.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/medline/medline.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqres -or objects/seqres -odi -od seqres.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqres.dump \ - -datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3862125 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seqtable MODULE_PATH=objects/seqtable MODULE_ASN=seqtable.asn MODULE_IMPORT='objects/general/general objects/seq/seq objects/seqloc/seqloc' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn' IMPFILES='objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seqtable.asn -M "objects/general/general.asn objects/seq/seq.asn objects/seqloc/seqloc.asn" -oA \ - -oc seqtable -or objects/seqtable -odi -od seqtable.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seqtable.dump \ - -datatool: 2.23.2 -make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable' -make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make[4] (Makefile.entrez2cli.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -File esummary.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865340 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=esummary MODULE_PATH=objtools/eutils/esummary MODULE_ASN=esummary.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m esummary.dtd -M "" -oA \ - -oc esummary -or objtools/eutils/esummary -odi -od esummary.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd esummary.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh seq all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq' +/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make[4] (Makefile.esearch.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo852548 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.esummary.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865427 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/taxon3/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh mla all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854303 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=medlars MODULE_PATH=objects/medlars MODULE_ASN=medlars.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m medlars.asn -M "objects/general/general.asn objects/biblio/biblio.asn" -oA \ @@ -16031,279 +16130,217 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh taxon3 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -j12 --jobserver-auth=fifo:/tmp/GMfifo3865259 flag-stamps -File uilist.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865375 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=uilist MODULE_PATH=objtools/eutils/uilist MODULE_ASN=uilist.dtd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m uilist.dtd -M "" -oA \ - -oc uilist -or objtools/eutils/uilist -odi -od uilist.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd uilist.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo853942 flag-stamps make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo854068 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -j12 --jobserver-auth=fifo:/tmp/GMfifo854052 flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo853867 flag-stamps +/usr/bin/make[4] (Makefile.gbseq.lib): Nothing to be done for `export-headers'. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3865383 flag-stamps -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865498 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ - -oc mla -or objects/mla -odi -od mla.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3865692 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ - -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3864513 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -j12 --jobserver-auth=fifo:/tmp/GMfifo853938 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo854060 flag-stamps /usr/bin/make[4] (Makefile.medlars.lib): Nothing to be done for `export-headers'. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo3865168 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -File efetch.module not found. Using defaults... -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3863948 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=efetch MODULE_PATH=objtools/eutils/efetch MODULE_ASN=efetch.xsd MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m efetch.xsd -M "" -oA \ - -oc efetch -or objtools/eutils/efetch -odi -od efetch.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd efetch.dump \ - -datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo3865340 flag-stamps -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch' -/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -cd objects/valid/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 sources -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/general/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/valid/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 sources +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd objects/general/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=general UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.uilist.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -cd objects/seqcode/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo854130 flag-stamps +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd objects/seqcode/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqcode UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.efetch.lib): Nothing to be done for `export-headers'. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -cd objects/blastxml/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null +cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid && /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/new_module.sh valid all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo3865427 flag-stamps -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' +cd objects/blastxml/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blastxml UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -j12 --jobserver-auth=fifo:/tmp/GMfifo3866280 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo3865375 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objects/blastxml2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo3866341 all -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -j12 --jobserver-auth=fifo:/tmp/GMfifo3865498 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo3866384 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -cd objtools/eutils/egquery/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3863948 flag-stamps +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' +cd objects/blastxml2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blastxml2 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo854992 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=mla MODULE_PATH=objects/mla MODULE_ASN=mla.asn MODULE_IMPORT='objects/biblio/biblio objects/medline/medline objects/medlars/medlars objects/pubmed/pubmed objects/pub/pub' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars/medlars.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn' IMPFILES='objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m mla.asn -M "objects/biblio/biblio.asn objects/medline/medline.asn objects/medlars/medlars.asn objects/pubmed/pubmed.asn objects/pub/pub.asn" -oA \ + -oc mla -or objects/mla -odi -od mla.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd mla.dump \ + +datatool: 2.23.2 +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo3865692 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general TMPL=general -j12 --jobserver-auth=fifo:/tmp/GMfifo855364 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo854303 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode TMPL=seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo855394 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861642 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=seq MODULE_PATH=objects/seq MODULE_ASN=seq.asn MODULE_IMPORT='objects/general/general objects/biblio/biblio objects/pub/pub objects/medline/medline objects/seqloc/seqloc objects/seqblock/seqblock objects/seqalign/seqalign objects/seqfeat/seqfeat objects/seqres/seqres objects/seqtable/seqtable' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio/biblio.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline/medline.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqloc/seqloc.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqblock/seqblock.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqalign/seqalign.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqres/seqres.asn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqtable/seqtable.asn' IMPFILES='objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' +cd objtools/eutils/egquery/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=egquery UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml TMPL=blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo855428 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/eutils/ehistory/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo853867 flag-stamps +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo855007 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=taxon3 MODULE_PATH=objects/taxon3 MODULE_ASN=taxon3.asn MODULE_IMPORT='objects/seqfeat/seqfeat' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqfeat/seqfeat.asn' IMPFILES='objects/seqfeat/seqfeat.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ - -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m seq.asn -M "objects/general/general.asn objects/biblio/biblio.asn objects/pub/pub.asn objects/medline/medline.asn objects/seqloc/seqloc.asn objects/seqblock/seqblock.asn objects/seqalign/seqalign.asn objects/seqfeat/seqfeat.asn objects/seqres/seqres.asn objects/seqtable/seqtable.asn" -oA \ - -oc seq -or objects/seq -odi -od seq.def -oex '' \ - -ocvs -pch 'ncbi_pch.hpp' -fd seq.dump \ + -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m taxon3.asn -M "objects/seqfeat/seqfeat.asn" -oA \ + -oc taxon3 -or objects/taxon3 -odi -od taxon3.def -oex '' \ + -ocvs -pch 'ncbi_pch.hpp' -fd taxon3.dump \ datatool: 2.23.2 -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo855538 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -cd objtools/eutils/ehistory/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ehistory UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml2 TMPL=blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3866518 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make[4] (Makefile.seq.lib): Nothing to be done for `export-headers'. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/make[4] (Makefile.mla.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make[4] (Makefile.taxon3.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo855650 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +cd objtools/eutils/einfo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo855635 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +/usr/bin/make[4] (Makefile.mlacli.lib): Nothing to be done for `export-headers'. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery TMPL=egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo3866565 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3866277 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo855352 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=valid MODULE_PATH=objects/valid MODULE_ASN=valid.asn MODULE_IMPORT='' IMPDEPS='' IMPFILES='' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m valid.asn -M "" -oA \ @@ -16312,6 +16349,12 @@ datatool: 2.23.2 make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid' @@ -16321,96 +16364,89 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objtools/eutils/einfo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=einfo UNIX_PROJ="" sources= configurables=configurables.null -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -cd objtools/eutils/elink/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo855007 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo855900 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory TMPL=ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo3866695 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -j12 --jobserver-auth=fifo:/tmp/GMfifo854992 flag-stamps /usr/bin/make[4] (Makefile.valid.lib): Nothing to be done for `export-headers'. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +cd objtools/eutils/elink/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=elink UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -j12 --jobserver-auth=fifo:/tmp/GMfifo3865498 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3861642 flag-stamps -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -j12 --jobserver-auth=fifo:/tmp/GMfifo3866819 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo TMPL=einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo3866812 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -j12 --jobserver-auth=fifo:/tmp/GMfifo3866277 flag-stamps -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=entrez2 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink TMPL=elink -j12 --jobserver-auth=fifo:/tmp/GMfifo856211 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -j12 --jobserver-auth=fifo:/tmp/GMfifo855352 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo856267 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -j12 --jobserver-auth=fifo:/tmp/GMfifo854992 flag-stamps +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -cd objtools/eutils/epost/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/epost/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=epost UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3867113 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -cd objtools/eutils/esearch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -j12 --jobserver-auth=fifo:/tmp/GMfifo856486 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' +cd objtools/eutils/esearch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=esearch UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost TMPL=epost -j12 --jobserver-auth=fifo:/tmp/GMfifo3867197 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo3867262 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch TMPL=esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo856680 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. . -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 3862313 (make_asn) +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/make_asn.lock for PID 850684 (make_asn) make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3861664 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all +/usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo849874 -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ builddir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build DATATOOL=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/datatool -oR /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++ \ -opm /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src -m gencoll_client.asn -M "objects/genomecoll/genome_collection.asn" -oA \ @@ -16442,7 +16478,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -j12 --jobserver-auth=fifo:/tmp/GMfifo3861664 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -j12 --jobserver-auth=fifo:/tmp/GMfifo849874 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' @@ -16452,12 +16488,12 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -j12 --jobserver-auth=fifo:/tmp/GMfifo3861664 flag-stamps +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=gencoll_client -j12 --jobserver-auth=fifo:/tmp/GMfifo849874 flag-stamps make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -cd objtools/eutils/espell/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/espell/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=espell UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' @@ -16466,19 +16502,19 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -j12 --jobserver-auth=fifo:/tmp/GMfifo3867776 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell TMPL=espell -j12 --jobserver-auth=fifo:/tmp/GMfifo858067 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory__.cpp -o ehistory__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o -/bin/rm -f libehistory.so .libehistory.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libehistory.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ehistory__.o ehistory___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libehistory.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libehistory.so -/bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ehistory.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -cd objtools/eutils/esummary/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o +/bin/rm -f libegquery.so .libegquery.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so +/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' +cd objtools/eutils/esummary/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=esummary UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' @@ -16487,7 +16523,28 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo3869115 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o +/bin/rm -f libseqcode.so .libseqcode.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqcode.so +/bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary TMPL=esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo858250 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' +cd objtools/eutils/uilist/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo858314 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/epost/epost__.cpp -o epost__.o @@ -16499,17 +16556,27 @@ /bin/ln -f .epost.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -cd objtools/eutils/uilist/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=uilist UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +cd objects/gbseq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/uilist TMPL=uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo3869320 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo858549 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory__.cpp -o ehistory__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o +/bin/rm -f libehistory.so .libehistory.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libehistory.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC ehistory__.o ehistory___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libehistory.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libehistory.so +/bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ehistory.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml__.cpp -o blastxml__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o @@ -16520,37 +16587,6 @@ /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -cd objects/gbseq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=gbseq UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq TMPL=gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3869911 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery__.cpp -o egquery__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o -/bin/rm -f libegquery.so .libegquery.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libegquery.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC egquery__.o egquery___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libegquery.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libegquery.so -/bin/ln -f .egquery.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.egquery.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode__.cpp -o seqcode__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o -/bin/rm -f libseqcode.so .libseqcode.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqcode.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqcode__.o seqcode___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqcode.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqcode.so -/bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqcode.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo__.cpp -o einfo__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o @@ -16561,16 +16597,6 @@ /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell__.cpp -o espell__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o -/bin/rm -f libespell.so .libespell.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libespell.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC espell__.o espell___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libespell.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libespell.so -/bin/ln -f .espell.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.espell.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch__.cpp -o esearch__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o @@ -16601,6 +16627,16 @@ /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell__.cpp -o espell__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o +/bin/rm -f libespell.so .libespell.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libespell.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC espell__.o espell___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libespell.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libespell.so +/bin/ln -f .espell.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.espell.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary__.cpp -o esummary__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o @@ -16621,7 +16657,7 @@ /bin/ln -f .entrez2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/entrez2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=entrez2cli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' @@ -16630,7 +16666,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3872837 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2 TMPL=entrez2cli -j12 --jobserver-auth=fifo:/tmp/GMfifo860716 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/elink/elink__.cpp -o elink__.o @@ -16642,7 +16678,7 @@ /bin/ln -f .elink.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -cd objtools/eutils/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=eutils UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' @@ -16651,7 +16687,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo3873447 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api TMPL=eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo860799 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/eutils.cpp -o eutils.o @@ -16660,41 +16696,10 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esearch.cpp -o esearch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/egquery.cpp -o egquery.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/epost.cpp -o epost.o -/usr/bin/g+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o -/bin/rm -f libgbseq.so .libgbseq.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so -/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': +/usr/bin/g+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp: In member function 'virtual ncbi::CRef ncbi::CEFetch_Request::FetchIdList(int)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/efetch.cpp:133:12: warning: catching polymorphic type 'class ncbi::CSerialException' by value [-Wcatch-value=] 133 | catch (CSerialException) { | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o -/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so -/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -+ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o -/bin/rm -f libeutils.so .libeutils.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libeutils.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -leinfo -lesearch -legquery -lepost -lelink -lesummary -lespell -luilist -lehistory -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libeutils.so -/bin/ln -f .eutils.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.eutils.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general__.cpp -o general__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/general/general___.cpp -o general___.o @@ -16706,10 +16711,10 @@ /bin/ln -f .general.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.general.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -cd objects/biblio/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null -cd objects/valid/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null +cd objects/biblio/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=biblio UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/valid/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=valid UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' @@ -16724,10 +16729,41 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo3876725 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -j12 --jobserver-auth=fifo:/tmp/GMfifo3876731 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq__.cpp -o gbseq__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o +/bin/rm -f libgbseq.so .libgbseq.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libgbseq.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbseq__.o gbseq___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libgbseq.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libgbseq.so +/bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.gbseq.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/biblio TMPL=biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo861994 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid TMPL=valid -j12 --jobserver-auth=fifo:/tmp/GMfifo862003 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client.cpp -o entrez2_client.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/entrez2/entrez2_client_.cpp -o entrez2_client_.o +/bin/rm -f libentrez2cli.so .libentrez2cli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libentrez2cli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC entrez2_client.o entrez2_client_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lentrez2 -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libentrez2cli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libentrez2cli.so +/bin/ln -f .entrez2cli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.entrez2cli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' ++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/elink.cpp -o elink.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/esummary.cpp -o esummary.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/espell.cpp -o espell.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o +/bin/rm -f libeutils.so .libeutils.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libeutils.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -leinfo -lesearch -legquery -lepost -lelink -lesummary -lespell -luilist -lehistory -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libeutils.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libeutils.so +/bin/ln -f .eutils.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.eutils.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid__.cpp -o valid__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/valid/valid___.cpp -o valid___.o @@ -16749,26 +16785,26 @@ /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -cd objects/medline/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null -cd objects/medlars/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medline/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=medline UNIX_PROJ="" sources= configurables=configurables.null +cd objects/medlars/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=medlars UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -j12 --jobserver-auth=fifo:/tmp/GMfifo3880932 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo3880937 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medlars TMPL=medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo866823 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/medline TMPL=medline -j12 --jobserver-auth=fifo:/tmp/GMfifo866821 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' @@ -16791,27 +16827,27 @@ /bin/ln -f .medline.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -cd objects/pub/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null -cd objects/pubmed/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pub/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=pub UNIX_PROJ="" sources= configurables=configurables.null +cd objects/pubmed/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=pubmed UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -j12 --jobserver-auth=fifo:/tmp/GMfifo3883494 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub TMPL=pub -j12 --jobserver-auth=fifo:/tmp/GMfifo868400 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo868401 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed TMPL=pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo3883499 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pubmed/pubmed__.cpp -o pubmed__.o @@ -16823,7 +16859,7 @@ /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -cd objtools/eutils/efetch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=efetch UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/eutils/efetch/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=efetch UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' @@ -16832,7 +16868,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3884755 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch TMPL=efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo869823 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/pub/pub__.cpp -o pub__.o @@ -16844,10 +16880,10 @@ /bin/ln -f .pub.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -cd objects/seq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null +cd objects/seq/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seq UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' +cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=mla UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' @@ -16862,9 +16898,9 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3884956 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq TMPL=seq -j12 --jobserver-auth=fifo:/tmp/GMfifo871069 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -j12 --jobserver-auth=fifo:/tmp/GMfifo871073 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mla -j12 --jobserver-auth=fifo:/tmp/GMfifo3884960 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq__.cpp -o seq__.o @@ -16877,7 +16913,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq___.cpp -o seq___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqalign___.cpp -o seqalign___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqblock___.cpp -o seqblock___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/buildIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:3, +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/buildIn file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 157 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:3, from seqalign__.cpp:1: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Dense_seg.cpp: In member function 'ncbi::objects::CDense_seg_Base::TDim ncbi::objects::CDense_seg::CheckNumRows() const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Dense_seg.cpp:92:13: warning: comparison of integer expressions of different signedness: 'const ncbi::objects::CDense_seg_Base::TDim' {aka 'const int'} and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] @@ -16898,6 +16939,26 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Dense_seg.cpp:1214:32: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1214 | for ( ; extra_seg < extra_segs.size() && extra_segs[extra_seg] == seg; ++new_seg, ++extra_seg) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here + 173 | s_ToUpper(fore_name); + | ~~~~~~~~~^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 86 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here + 631 | s_ToLower(databank_name); + | ~~~~~~~~~^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ^~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' + 77 | static const auto& s_Facet = get_ctype_facet(locale()); + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/seqalign__.cpp:9: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp: In member function 'void ncbi::objects::CSeq_align::RemapToLoc(ncbi::objects::CSeq_align_Base::TDim, const ncbi::objects::CSeq_loc&, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1382:41: warning: 'void ncbi::objects::CDense_seg::RemapToLoc(ncbi::objects::CDense_seg_Base::TDim, const ncbi::objects::CSeq_loc&, bool)' is deprecated [-Wdeprecated-declarations] @@ -16923,6 +16984,16 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqalign/Seq_align.cpp:1893:52: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CDense_seg_Base::TNumseg' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1893 | for (CDense_seg::TNumseg i = 0; i < ds.GetLens().size(); | ~~^~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, + from seqfeat__.cpp:1: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] + 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { + | ~~^~~~~~~~~~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla__.cpp -o mla__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla___.cpp -o mla___.o @@ -16933,7 +17004,7 @@ /bin/ln -f .mla.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/mla/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=mlacli UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' @@ -16942,43 +17013,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -j12 --jobserver-auth=fifo:/tmp/GMfifo3891959 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla TMPL=mlacli -j12 --jobserver-auth=fifo:/tmp/GMfifo872581 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/efetch__.cpp:282: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In function 'std::string eutils::{anonymous}::utf8_to_string(const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:157:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 157 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/seqfeat__.cpp:42, - from seqfeat__.cpp:1: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'ncbi::CTempString ncbi::objects::s_AaName(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:124:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 124 | if (idx > 0 && idx < ArraySize(sc_TrnaList)) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp: In function 'void ncbi::objects::s_SetTrnaProduct(CTrna_ext&, const std::string&, std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/../seqfeat/RNA_ref.cpp:186:27: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'long unsigned int'} [-Wsign-compare] - 186 | for (int i = 0; i < ArraySize(sc_TrnaList); ++i) { - | ~~^~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToUpper(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:173:14: required from here - 173 | s_ToUpper(fore_name); - | ~~~~~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:86:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 86 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp: In instantiation of 'void eutils::{anonymous}::s_ToLower(StringT&) [with StringT = std::__cxx11::basic_string]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:631:18: required from here - 631 | s_ToLower(databank_name); - | ~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ^~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/eutils/efetch/PubmedArticle.cpp:77:79: note: the temporary was destroyed at the end of the full expression 'eutils::get_ctype_facet(std::locale())' - 77 | static const auto& s_Facet = get_ctype_facet(locale()); - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqfeat___.cpp -o seqfeat___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqloc___.cpp -o seqloc___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include seqres___.cpp -o seqres___.o @@ -17017,6 +17053,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seqport_util.cpp:1735:40: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 1735 | if((n2 >= start_at) && (n2 < start_at + size)) | ~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const std::string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2965:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 2965 | catch (CStringException) { + | ^~~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client.cpp -o mla_client.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o @@ -17027,10 +17067,6 @@ /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp: In member function 'virtual void ncbi::objects::CSeq_id_Giim_Tree::FindMatchStr(const std::string&, ncbi::objects::CSeq_id_Which_Tree::TSeq_id_MatchList&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_tree.cpp:2965:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 2965 | catch (CStringException) { - | ^~~~~~~~~~~~~~~~ strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_handle.cpp -o seq_id_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_id_mapper.cpp -o seq_id_mapper.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seq/seq_loc_mapper_base.cpp -o seq_loc_mapper_base.o @@ -17062,71 +17098,71 @@ /bin/ln -f .seq.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -cd objects/seqset/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null -cd objects/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objects/genomecoll/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null -cd objects/variation/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null -cd objects/taxon1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null -cd objects/taxon3/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/seqset/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqset UNIX_PROJ="" sources= configurables=configurables.null +cd objects/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blastdb UNIX_PROJ="" sources= configurables=configurables.null +cd objects/genomecoll/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=genome_collection UNIX_PROJ="" sources= configurables=configurables.null +cd objects/variation/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=variation UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=taxon1 UNIX_PROJ="" sources= configurables=configurables.null +cd objects/taxon3/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=taxon3 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3927027 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -j12 --jobserver-auth=fifo:/tmp/GMfifo3927030 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo3927046 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3927037 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -j12 --jobserver-auth=fifo:/tmp/GMfifo3927033 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo3927028 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blastdb TMPL=blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo875141 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation TMPL=variation -j12 --jobserver-auth=fifo:/tmp/GMfifo875143 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1 TMPL=taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo875144 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset TMPL=seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo875140 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll TMPL=genome_collection -j12 --jobserver-auth=fifo:/tmp/GMfifo875142 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3 TMPL=taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo875145 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp: In member function 'void ncbi::objects::CDomainStorage::AddField(int, int, const std::string&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp:787:24: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] @@ -17142,6 +17178,17 @@ /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o +/bin/rm -f libtaxon3.so .libtaxon3.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so +/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset__.cpp -o seqset__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqset/seqset___.cpp -o seqset___.o @@ -17153,80 +17200,62 @@ /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -cd objects/scoremat/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null -cd objects/seqedit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null +cd objects/scoremat/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=scoremat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/seqedit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqedit UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/seqsplit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +cd objects/seqsplit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqsplit UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/submit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objects/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objects/submit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=submit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +cd objects/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=id1 UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo3933232 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo876458 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat TMPL=scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo3933229 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -j12 --jobserver-auth=fifo:/tmp/GMfifo3933250 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo3933238 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit TMPL=submit -j12 --jobserver-auth=fifo:/tmp/GMfifo876466 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo876468 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1 TMPL=id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3933257 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit TMPL=seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo876461 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit TMPL=seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo876459 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3__.cpp -o taxon3__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3___.cpp -o taxon3___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o -/bin/rm -f libtaxon3.so .libtaxon3.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtaxon3.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon3__.o taxon3___.o taxon3.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtaxon3.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon3.so -/bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon3.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o -/bin/rm -f libtaxon1.so .libtaxon1make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation__.cpp -o variation__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.so .libvariation.so.stamp @@ -17236,14 +17265,14 @@ /bin/ln -f .variation.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon1.so -/bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1__.cpp -o taxon1__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1___.cpp -o taxon1___.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/taxon1.cpp -o taxon1.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/cache.cpp -o cache.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/utils.cpp -o utils.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o +/bin/rm -f libtaxon1.so .libtaxon1make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection__.cpp -o genome_collection__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.so .libgenome_collection.so.stamp @@ -17253,37 +17282,13 @@ /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o -/bin/rm -f libid1.so .libid1.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so -/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o -/bin/rm -f libscoremat.so .libscoremat.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libscoremat.so -/bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.scoremat.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3936696 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libtaxon1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnect -lseq -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libtaxon1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libtaxon1.so +/bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.taxon1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit__.cpp -o submit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/submit/submit___.cpp -o submit___.o @@ -17294,7 +17299,7 @@ /bin/ln -f .submit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -cd objtools/readers/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/readers/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xobjread UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' @@ -17303,7 +17308,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -j12 --jobserver-auth=fifo:/tmp/GMfifo3936773 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers TMPL=xobjread -j12 --jobserver-auth=fifo:/tmp/GMfifo877327 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_message.cpp -o reader_message.o @@ -17317,14 +17322,33 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_seq_entry.cpp -o agp_seq_entry.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp -o agp_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp -o agp_validate_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFIL/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1__.cpp -o id1__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id1/id1___.cpp -o id1___.o +/bin/rm -f libid1.so .libid1.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC id1__.o id1___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid1.so +/bin/ln -f .id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp: In member function 'int ncbi::CAgpErrEx::GetCount(ncbi::CAgpErr::EErrCode) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_util.cpp:1708:14: warning: comparison between 'enum ncbi::CAgpErr::EErrCode' and 'enum ncbi::CAgpErrEx::' [-Wenum-compare] 1708 | if (code < CODE_Last) { | ~~~~~^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 585 | catch(CException e){ - | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat__.cpp -o scoremat__.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o +/bin/rm -f libscoremat.so .libscoremat.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libscoremat.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC scoremat__.o scoremat___.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqset -lseq -lgeneral -lxser -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libscoremat.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libscoremat.so +/bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.scoremat.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' +cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp: In function 'ncbi::CRef ncbi::AgpRead(CNcbiIstream&, EAgpRead_IdRule, bool, std::vector >*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_read.cpp:58:12: warning: 'void ncbi::AgpRead(CNcbiIstream&, std::vector >&, EAgpRead_IdRule, bool, std::vector >*)' is deprecated [-Wdeprecated-declarations] 58 | AgpRead(is, entries, component_id_rule, set_gap_data, component_types); @@ -17340,7 +17364,25 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/agp_read.hpp:52:6: note: declared here 52 | void AgpRead(CNcbiIstream& is, | ^~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp: In member function 'virtual void ncbi::CAgpValidateReader::OnObjectChange()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_validate_reader.cpp:585:28: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 585 | catch(CException e){ + | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=blast -j12 --jobserver-auth=fifo:/tmp/GMfifo877777 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +E64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit__.cpp -o seqedit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.so .libseqedit.so.stamp @@ -17350,13 +17392,7 @@ /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -E64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/cigar.cpp -o cigar.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta.cpp -o fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formats.cpp -o aln_formats.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/alnread.cpp -o alnread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_errors.cpp -o aln_errors.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_error_reporter.cpp -o aln_error_reporter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit__.cpp -o seqsplit__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.so .libseqsplit.so.stamp @@ -17366,66 +17402,66 @@ /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -cd objmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null -cd objects/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null -cd sra/readers/sra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=sraread UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=objmgr UNIX_PROJ="" sources= configurables=configurables.null +cd objects/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd sra/readers/sra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=sraread UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -j12 --jobserver-auth=fifo:/tmp/GMfifo3938682 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3938663 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3938670 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr TMPL=objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo878949 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2 TMPL=id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo878951 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/sraread.cpp -o sraread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/vdbread.cpp -o vdbread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/kdbread.cpp -o kdbread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/csraread.cpp -o csraread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsresolver.cpp -o wgsresolver.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsresolver_impl.cpp -o wgsresolver_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsread.cpp -o wgsread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/graphread.cpp -o graphread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/buimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra TMPL=sraread -j12 --jobserver-auth=fifo:/tmp/GMfifo878957 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_setters.cpp -o seq_table_setters.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_info.cpp -o seq_table_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_info.cpp -o seq_annot_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/table_field.cpp -o table_field.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_switch.cpp -o seq_map_switch.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/snp_annot_info.cpp -o snp_annot_info.o -/usr/bDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o +/usr/bmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 56 | if ((orderedIds.size() > idCount) && + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/sraread.cpp -o sraread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/vdbread.cpp -o vdbread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/kdbread.cpp -o kdbread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/csraread.cpp -o csraread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strongDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp -o aln_formatguess.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp -o aln_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp -o aln_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp -o aln_scanner.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_fastagap.cpp -o aln_scanner_fastagap.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp -o aln_scanner_clustal.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-p/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp: In function 'void ncbi::objects::AlnUtil::CheckId(const std::string&, const std::vector&, int, int, bool)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_util.cpp:56:28: warning: comparison of integer expressions of different signedness: 'std::vector::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 56 | if ((orderedIds.size() > idCount) && - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-p -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsresolver.cpp -o wgsresolver.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsresolver_impl.cpp -o wgsresolver_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/wgsread.cpp -o wgsread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/graphread.cpp -o graphread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bui/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp: In member function 'bool ncbi::objects::CAlnFormatGuesser::xSampleIsClustal(TSample&, ncbi::objects::CPeekAheadStream&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:137:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 137 | if (lineCount < sample.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~ @@ -17447,6 +17483,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_formatguess.cpp:295:22: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] 295 | return (dataSize == (endOffset - startOffset + 1)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 92 | for (auto i=0; i < mSequences.size(); ++i) { + | ~~^~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'bool ncbi::objects::CAlnScanner::xSeqIdIsEqualToInfoAt(const std::string&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 233 | if (index >= mSeqIds.size()) { + | ~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp: In member function 'void ncbi::CAlnReader::x_VerifyAlignmentInfo(const ncbi::objects::SAlignmentFile&, TReadFlags)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:409:29: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] 409 | for (int i=0; i< numDeflines; ++i) { @@ -17459,20 +17503,31 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_reader.cpp:507:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 507 | if (i < m_DeflineInfo.size() && !m_DeflineInfo[i].mData.empty()) { | ~~^~~~~~~~~~~~~~~~~~~~~~ -in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/graph_ci.cpp -o graph_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -sp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'virtual void ncbi::objects::CAlnScanner::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:92:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 92 | for (auto i=0; i < mSequences.size(); ++i) { - | ~~^~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp: In member function 'bool ncbi::objects::CAlnScanner::xSeqIdIsEqualToInfoAt(const std::string&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner.cpp:233:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 233 | if (index >= mSeqIds.size()) { - | ~~~~~~^~~~~~~~~~~~~~~~~ +rotector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o +/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:296:27: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] + 296 | if (currentLineLength != blockLineLength) { + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 129 | if (dataLineCount < mSequenceCount) { // in first block + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 210 | if (mSequenceCount != mSeqIds.size()) { + | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 125 | if (lineInBlock != expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp: In member function 'virtual void ncbi::objects::CAlnScannerSequin::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:75:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 75 | if (lineInBlock != mSeqIds.size()) { @@ -17490,59 +17545,24 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp:264:42: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 264 | for (auto curBlock = 1; curBlock < tokens.size(); ++curBlock) { | ~~~~~~~~~^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp: In member function 'void ncbi::objects::CAlnScannerClustal::sProcessClustalDataLine(const std::vector >&, int, int, int, bool, int&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_clustal.cpp:296:27: warning: comparison of integer expressions of different signedness: 'long unsigned int' and 'int' [-Wsign-compare] - 296 | if (currentLineLength != blockLineLength) { - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ -rotector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_nexus.cpp -o aln_scanner_nexus.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp -o aln_scanner_phylip.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_sequin.cpp -o aln_scanner_sequin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp -o aln_scanner_multalign.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_aln_builder.cpp -o fasta_aln_builder.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_reader_utils.cpp -o fasta_reader_utils.o -/usr/bin/g++ -std=gnu++17 -c -W/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:129:27: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 129 | if (dataLineCount < mSequenceCount) { // in first block - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp: In member function 'virtual void ncbi::objects::CAlnScannerPhylip::xVerifyAlignmentData(const ncbi::objects::CSequenceInfo&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_phylip.cpp:210:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 210 | if (mSequenceCount != mSeqIds.size()) { - | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ -all -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o +in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_types_ci.cpp -o annot_types_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_loc_cvt.cpp -o seq_loc_cvt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_selector.cpp -o annot_selector.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_descr_ci.cpp -o seq_descr_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/feat_ci.cpp -o feat_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/graph_ci.cpp -o graph_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -spall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/getfeature.cpp -o getfeature.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/reader_data.cpp -o reader_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/microarray_reader.cpp -o microarray_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/phrap.cpp -o phrap.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtool/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp: In member function 'virtual void ncbi::objects::CAlnScannerMultAlign::xImportAlignmentData(ncbi::objects::CSequenceInfo&, ncbi::objects::CLineInput&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:125:37: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 125 | if (lineInBlock != expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/aln_scanner_multalign.cpp:135:48: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 135 | if (!inFirstBlock && lineInBlock == expectedNumSequences) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ -ecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_object.cpp -o annot_object.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT 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bioseq_set_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOU/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] - 1279 | } catch( CStringException ) { - | ^~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-localmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2__.cpp -o id2__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.so .libid2.so.stamp @@ -17552,7 +17572,7 @@ /bin/ln -f .id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -cd objtools/pubseq_gateway/client/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/pubseq_gateway/client/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=psg_client UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' @@ -17561,9 +17581,31 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -j12 --jobserver-auth=fifo:/tmp/GMfifo3957591 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client TMPL=psg_client -j12 --jobserver-auth=fifo:/tmp/GMfifo882158 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +ecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_object.cpp -o annot_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_object_index.cpp -o annot_object_index.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_ci.cpp -o annot_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info.cpp -o tse_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_info_object.cpp -o tse_info_object.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_info.cpp -o seq_entry_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp: In member function 'bool ncbi::objects::CFeatureTableReader_Imp::x_AddQualifierToCdregion(ncbi::CRef, ncbi::objects::CSeqFeatData&, EQual, const std::string&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/readfeat.cpp:1279:22: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] + 1279 | } catch( CStringException ) { + | ^~~~~~~~~~~~~~~~ +-mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_base_info.cpp -o bioseq_base_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_info.cpp -o bioseq_set_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_info.cpp -o bioseq_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_source.cpp -o data_source.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/priority.cpp -o priority.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_impl.cpp -o prefetch_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOU-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pamake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast__.cpp -o blast__.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blast___.cpp -o blast___.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/names.cpp -o names.o @@ -17574,59 +17616,65 @@ /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null +cd objects/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xnetblastcli UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blast_unit_test_util UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqalign_util UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/vdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=vdb2blast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/vdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=vdb2blast UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +RCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprodmake[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blast_app_util UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3959202 all -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -j12 --jobserver-auth=fifo:/tmp/GMfifo3959109 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3959169 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -j12 --jobserver-auth=fifo:/tmp/GMfifo3959270 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast TMPL=xnetblastcli -j12 --jobserver-auth=fifo:/tmp/GMfifo884592 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -j12 --jobserver-auth=fifo:/tmp/GMfifo884613 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqalign_util -j12 --jobserver-auth=fifo:/tmp/GMfifo884600 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test_util -j12 --jobserver-auth=fifo:/tmp/GMfifo884597 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_app_util -j12 --jobserver-auth=fifo:/tmp/GMfifo884627 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb TMPL=vdb2blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3959256 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' @@ -17652,49 +17700,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/vdb_priv.c:525:26: warning: variable 't_seqLength' set but not used [-Wunused-but-set-variable] 525 | uint64_t t_seqLength = 0; | ^~~~~~~~~~~ -RCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager.cpp -o prefetch_manager.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_manager_impl.cpp -o prefetch_manager_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/prefetch_actions.cpp -o prefetch_actions.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope.cpp -o scope.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/heap_scope.cpp -o heap_scope.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_impl.cpp -o scope_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reprod-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff3_location_merger.cpp -o gff3_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gtf_location_merger.cpp -o gtf_location_merger.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff_base_columns.cpp -o gff_base_columns.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_data.cpp -o gff2_data.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp -o gff2_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gvf_reader.cpp -o gvf_reader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-pamake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o -/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp -ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqalign_util.a -/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o -/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so -/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -cd objtools/blast/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -j12 --jobserver-auth=fifo:/tmp/GMfifo3971342 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp: In member function 'virtual void ncbi::objects::CVcfReader::xSetFileFormat(const std::string&, ncbi::objects::CSeq_annot&, bool&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/vcf_reader.cpp:332:27: warning: catching polymorphic type 'class std::exception' by value [-Wcatch-value=] + 332 | catch (std::exception except) { + | ^~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp: In member function 'bool ncbi::objects::CGff2Reader::xGetStartsOnPlusStrand(ncbi::TSeqPos, const std::vector >&, bool, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/gff2_reader.cpp:832:21: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] 832 | for (auto i=0; i >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 484 | if (blockSizes.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 505 | if (blockStarts.size() != blockCount) { - | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp: In member function 'void ncbi::objects::CPslData::Initialize(const ncbi::objects::CReaderBase::TReaderLine&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp: In member function 'void ncbi::objects::CPslData::Initialize(const ncbi::objects::CReaderBase::TReaderLine&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:144:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 144 | if (mBlockCount != mBlockSizes.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ @@ -17741,14 +17732,21 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/psl_data.cpp:156:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 156 | if (mBlockCount != mBlockStartsT.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp: In member function 'virtual bool ncbi::objects::CBedReader::xDetermineLikelyColumnCount(ncbi::objects::CLinePreBuffer&, ncbi::objects::ILineErrorListener*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:484:35: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 484 | if (blockSizes.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_reader.cpp:505:36: warning: comparison of integer expressions of different signedness: 'std::vector >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 505 | if (blockStarts.size() != blockCount) { + | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o -/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp -ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a -/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_cmp.cpp -o seqalign_cmp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqalign_set_convert.cpp -o seqalign_set_convert.o +/bin/rm -f libseqalign_util.a .libseqalign_util.a.stamp +ar cr libseqalign_util.a seqalign_cmp.o seqalign_set_convert.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqalign_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqalign_util.a +/bin/ln -f .seqalign_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqalign_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/bed_autosql_custom.cpp -o bed_autosql_custom.o @@ -17757,38 +17755,41 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp -o source_mod_parser.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/fasta_exception.cpp -o fasta_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/agp_converter.cpp -o agp_converter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-patWformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -ucible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_info.cpp -o scope_info.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_handle.cpp -o tse_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map.cpp -o seq_map.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_map_ci.cpp -o seq_map_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_ci.cpp -o seq_entry_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_ci.cpp -o seq_annot_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_table_ci.cpp -o seq_table_ci.o +/usr/bimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient.cpp -o blastclient.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o +/bin/rm -f libxnetblastcli.so .libxnetblastcli.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxnetblastcli.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blastclient.o blastclient_.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblast -lxconnect -lxser -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxnetblastcli.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxnetblastcli.so +/bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xnetblastcli.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' +cd objtools/blast/services/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blast_services UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services TMPL=blast_services -j12 --jobserver-auth=fifo:/tmp/GMfifo890179 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/ucscregion_reader.cpp -o ucscregion_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/struct_cmt_reader.cpp -o struct_cmt_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_reader.cpp -o mod_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/mod_error.cpp -o mod_error.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/descr_mod_apply.cpp -o descr_mod_apply.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/feature_mod_apply.cpp -o feature_mod_apply.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/nmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o -/bin/rm -f libblast_services.so .libblast_services.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_services.so -/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_services.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' --D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/vdbblast_local.cpp -o vdbblast_local.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/blastn_vdb_args.cpp -o blastn_vdb_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/tblastn_vdb_args.cpp -o tblastn_vdb_args.o -/bin/rm -f libvdb2blast.a .libvdb2blast.a.stamp -ar cr libvdb2blast.a common_priv.o error_priv.o seqsrc_vdb.o vdb2blast_util.o vdb_priv.o vdbsequtil.o vdbalias.o vdbblast_local.o blastn_vdb_args.o tblastn_vdb_args.o -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvdb2blast.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libvdb2blast.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvdb2blast.a -/bin/ln -f .vdb2blast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.vdb2blast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp: In function 'void ncbi::objects::s_GetPrimerInfo(const CSourceModParser::SMod*, const CSourceModParser::SMod*, std::vector, std::__cxx11::basic_string > >&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/readers/source_mod_parser.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const long unsigned int' [-Wsign-compare] 877 | for (int i=0; i ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/test_objmgr.cpp -o test_objmgr.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_test_util.cpp -o blast_test_util.o +/bin/rm -f libblast_unit_test_util.a .libblast_unit_test_util.a.stamp +ar cr libblast_unit_test_util.a test_objmgr.o blast_test_util.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_unit_test_util.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_unit_test_util.a +/bin/ln -f .blast_unit_test_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_unit_test_util.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +n/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_entry_handle.cpp -o seq_entry_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_set_handle.cpp -o bioseq_set_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_handle.cpp -o bioseq_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_annot_handle.cpp -o seq_annot_handle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/align_ci.cpp -o align_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader.cpp -o data_loader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-pat/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp: In function 'ncbi::CRef ncbi::ExtractPssmAncillaryData(const objects::CPssmWithParameters&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_app_util.cpp:802:66: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 802 | true)); | ^ -ld/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/snpread.cpp -o snpread.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/vdbcache.cpp -o vdbcache.o -/bin/rm -f libsraread.a .libsraread.a.stamp -ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o vdbcache.o -/bin/rm -f libsraread.so .libsraread.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libsraread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o vdbcache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsraread.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsraread.a -: libsraread.so -/bin/ln -f .sraread-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sraread-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libsraread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsraread.so -/bin/ln -f .sraread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sraread.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/vdbblast_local.cpp -o vdbblast_local.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb 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-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/vdb/tblastn_vdb_args.cpp -o tblastn_vdb_args.o +/bin/rm -f libvdb2blast.a .libvdb2blast.a.stamp +ar cr libvdb2blast.a common_priv.o error_priv.o seqsrc_vdb.o vdb2blast_util.o vdb_priv.o vdbsequtil.o vdbalias.o vdbblast_local.o blastn_vdb_args.o tblastn_vdb_args.o +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvdb2blast.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libvdb2blast.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libvdb2blast.a +/bin/ln -f .vdb2blast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.vdb2blast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o +/bin/rm -f libblast_services.so .libblast_services.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libblast_services.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_services.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxnetblastcli -lxnetblast -lxser -lxconnect -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libblast_services.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblast_services.so +/bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_services.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' h/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range.cpp -o handle_range.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/objmgr_exception.cpp -o objmgr_exception.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/handle_range_map.cpp -o handle_range_map.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/object_manager.cpp -o object_manager.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_vector.cpp -o seq_vector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_vector_ci.cpp -o seq_vector_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-promake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client.cpp -o psg_client.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o +/bin/rm -f libpsg_client.so .libpsg_client.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libpsg_client.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC psg_client.o psg_client_transport.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnserv -lxxconnect2 -luv -lnghttp2 +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libpsg_client.so +/bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.psg_client.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' +tection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seqdesc_ci.cpp -o seqdesc_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_split_info.cpp -o tse_split_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_chunk_info.cpp -o tse_chunk_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/bioseq_ci.cpp -o bioseq_ci.o @@ -17854,23 +17885,28 @@ /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard 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/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o -/bin/rm -f libpsg_client.so .libpsg_client.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libpsg_client.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC psg_client.o psg_client_transport.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxconnserv -lxxconnect2 -luv -lnghttp2 -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libpsg_client.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libpsg_client.so -/bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.psg_client.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' T_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_mapper.cpp -o seq_align_mapper.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/annot_collector.cpp -o annot_collector.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/data_loader_factory.cpp -o data_loader_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/mapped_feat.cpp -o mapped_feat.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 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-D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/ld/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/snpread.cpp -o snpread.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/readers/sra/vdbcache.cpp -o vdbcache.o +/bin/rm -f libsraread.a .libsraread.a.stamp +ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o vdbcache.o +/bin/rm -f libsraread.so .libsraread.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libsraread.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o vdbcache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread +: libsraread.so +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libsraread.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsraread.so +/bin/ln -f libsraread.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libsraread.a +/bin/ln -f .sraread.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sraread.dep +/bin/ln -f .sraread-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.sraread-static.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' +build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/seq_align_handle.cpp -o seq_align_handle.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/tse_assigner.cpp -o tse_assigner.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction.cpp -o scope_transaction.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/scope_transaction_impl.cpp -o scope_transaction_impl.o @@ -17903,114 +17939,120 @@ /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -cd objtools/blast/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null -cd objmgr/util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null -cd algo/dustmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqdb UNIX_PROJ="" sources= configurables=configurables.null +cd objmgr/util/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=util UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd algo/dustmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xalgodustmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xreader UNIX_PROJ="" sources= configurables=configurables.null -cd sra/data_loaders/csra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xloader_csra UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd sra/data_loaders/csra/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xloader_csra UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd sra/data_loaders/wgs/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xloader_wgs UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/segmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd sra/data_loaders/wgs/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xloader_wgs UNIX_PROJ="" sources= configurables=configurables.null +cd algo/segmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xalgosegmask UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -cd objmgr/split/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +cd objmgr/split/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=id2_split UNIX_PROJ="" sources= configurables=configurables.null make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -j12 --jobserver-auth=fifo:/tmp/GMfifo910472 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra TMPL=ncbi_xloader_csra -j12 --jobserver-auth=fifo:/tmp/GMfifo910482 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -j12 --jobserver-auth=fifo:/tmp/GMfifo910473 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader TMPL=seqdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3989915 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -j12 --jobserver-auth=fifo:/tmp/GMfifo3989935 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util TMPL=util -j12 --jobserver-auth=fifo:/tmp/GMfifo3989917 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3989955 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs TMPL=ncbi_xloader_wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo3989950 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3989925 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -j12 --jobserver-auth=fifo:/tmp/GMfifo3989963 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xreader -j12 --jobserver-auth=fifo:/tmp/GMfifo910477 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra TMPL=ncbi_xloader_csra -j12 --jobserver-auth=fifo:/tmp/GMfifo3989944 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask TMPL=xalgodustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo910474 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask TMPL=xalgosegmask -j12 --jobserver-auth=fifo:/tmp/GMfifo910503 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wn/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs TMPL=ncbi_xloader_wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo910488 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split TMPL=id2_split -j12 --jobserver-auth=fifo:/tmp/GMfifo910536 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp -o dispatcher.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader.cpp -o reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/writer.cpp -o writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/processors.cpp -o processors.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/wgsmaster.cpp -o wgsmaster.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp -o weight.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp -o sequence.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/feature.cpp -o feature.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/indexer.cpp -o indexer.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seqtitle.cpp -o seqtitle.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp -o create_defline.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wnmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb.cpp -o seqdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbbitset.cpp -o seqdbbitset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfilter.cpp -o seqdbfilter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp -o seqdbatlas.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbalias.cpp -o seqdbalias.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE i-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +i-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_snp.cpp -o reader_snp.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/seqref.cpp -o seqref.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp -o blob_id.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/request_result.cpp -o request_result.o @@ -18022,13 +18064,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_blob.cpp -o split_blob.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_impl.cpp -o blob_splitter_impl.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/blob_splitter_parser.cpp -o blob_splitter_parser.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n-I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp -o seqdbcommon.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbfile.cpp -o seqdbfile.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbimpl.cpp -o seqdbimpl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp -o seqdbvol.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvolset.cpp -o seqdbvolset.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdboidlist.cpp -o seqdboidlist.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/n/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp: In constructor 'ncbi::objects::CBlob_id::CBlob_id(ncbi::CTempString)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/blob_id.cpp:51:12: warning: catching polymorphic type 'class ncbi::CStringException' by value [-Wcatch-value=] 51 | catch (CStringException) { | ^~~~~~~~~~~~~~~~ @@ -18039,23 +18075,18 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/annot_piece.cpp -o annot_piece.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/chunk_info.cpp -o chunk_info.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/size.cpp -o size.o -/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:972:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] - 972 | int found_short(-1); - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': +/usr/b/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp: In static member function 'static char* ncbi::CSeqDBAtlas::Alloc(size_t, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbatlas.cpp:256:16: warning: catching polymorphic type 'class std::bad_alloc' by value [-Wcatch-value=] 256 | catch(std::bad_alloc) { | ^~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o -/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so -/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp: In member function 'ncbi::CSeqDBIsam::EErrorCode ncbi::CSeqDBIsam::x_StringSearch(const std::string&, std::vector >&, std::vector >&, std::vector&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp:972:9: warning: variable 'found_short' set but not used [-Wunused-but-set-variable] + 972 | int found_short(-1); + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryTaxIdList(const char*, const char*, CSeqDBGiList::STaxIdsOids&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] + 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) + | ~~~~~~~~~~~^~~~~~~~~~~~~ o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/obj_sniff.cpp -o obj_sniff.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp -o seq_loc_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_align_util.cpp -o seq_align_util.o @@ -18069,10 +18100,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/dispatcher.cpp:1162:23: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] 1162 | if (total > kMaxErrorSeqIds) { | ~~~~~~^~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp: In function 'void ncbi::SeqDB_ReadMemoryTaxIdList(const char*, const char*, CSeqDBGiList::STaxIdsOids&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcommon.cpp:1094:52: warning: comparison of integer expressions of different signedness: 'Int4' {aka 'int'} and 'unsigned int' [-Wsign-compare] - 1094 | if (((bendp - bbeginp) < 2) || (bbeginp[0] != 0xFFFFFFFF) - | ~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] + 363 | } catch (CObjmgrUtilException) { + | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here + 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { + | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] + 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { + | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp: In member function 'int ncbi::CSeqDBVol::GetAmbigPartialSeq(int, char**, int, ncbi::ESeqDBAllocType, ncbi::CSeqDB::TSequenceRanges*, ncbi::CSeqDB::TSequenceRanges*) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbvol.cpp:1542:50: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 1542 | if ((*partial_ranges)[num_ranges - 1].second > base_length) { @@ -18088,30 +18126,33 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/seq_loc_util.cpp:612:14: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] 612 | } catch (CException) { | ^~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp: In function 'void ncbi::objects::GetProteinWeights(const CBioseq_Handle&, TWeights&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/weight.cpp:363:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] - 363 | } catch (CObjmgrUtilException) { - | ^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp: In instantiation of 'bool ncbi::objects::{anonymous}::s_IsTagStart(const _T&, const _T&) [with _T = const char*]': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1824:61: required from here - 1824 | if (!in_html_tag && *str_iter == '<' && s_IsTagStart(str_iter, str.end())) { - | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1752:57: warning: comparison of integer expressions of different signedness: 'int' and 'const size_t' {aka 'const long unsigned int'} [-Wsign-compare] - 1752 | for (int possible_str_idx = 0; possible_str_idx < num_possible_tag_starts; ++possible_str_idx) { - | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] - 1114 | static bool s_IsValidAccession(const string& acc) - | ^~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/dustmask/symdust.cpp -o symdust.o +/bin/rm -f libxalgodustmask.so .libxalgodustmask.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgodustmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC symdust.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgodustmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgodustmask.so +/bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgodustmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o +/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC segmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgosegmask.so +/bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgosegmask.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbisam.cpp -o seqdbisam.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbtax.cpp -o seqdbtax.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbgilistset.cpp -o seqdbgilistset.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbexpert.cpp -o seqdbexpert.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbblob.cpp -o seqdbblob.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdbcol.cpp -o seqdbcol.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 2436 | if (offset > 0 && offset < m_MainTitle.length()) { - | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/objutil.cpp:1114:13: warning: 'bool ncbi::objects::s_IsValidAccession(const std::string&)' defined but not used [-Wunused-function] + 1114 | static bool s_IsValidAccession(const string& acc) + | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In function 'ncbi::CRef ncbi::objects::sequence::SourceToProduct(const ncbi::objects::CSeq_feat&, const ncbi::objects::CSeq_loc&, TS2PFlags, ncbi::objects::CScope*, int*)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:814:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 814 | } catch (CObjmgrUtilException) { @@ -18123,6 +18164,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:862:18: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 862 | } catch (CObjmgrUtilException) { | ^~~~~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp: In member function 'void ncbi::objects::sequence::CDeflineGenerator::x_SetTitleFromProtein(const ncbi::objects::CBioseq_Handle&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/create_defline.cpp:2436:38: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 2436 | if (offset > 0 && offset < m_MainTitle.length()) { + | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp: In member function 'ncbi::CRef ncbi::objects::SRelLoc::Resolve(const ncbi::objects::CSeq_loc&, ncbi::objects::CScope*, TFlags) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:4763:22: warning: catching polymorphic type 'class ncbi::objects::CObjmgrUtilException' by value [-Wcatch-value=] 4763 | } catch (CObjmgrUtilException) { @@ -18145,15 +18190,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/sequence.cpp:3647:43: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'int' [-Wsign-compare] 3647 | const size_t usable_size = seq.size() > frame ? seq.size() - frame : 0; | ~~~~~~~~~~~^~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/segmask/segmask.cpp -o segmask.o -/bin/rm -f libxalgosegmask.so .libxalgosegmask.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgosegmask.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC segmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast -lxobjmgr -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libxalgosegmask.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgosegmask.so -/bin/ln -f .xalgosegmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgosegmask.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp: In member function 'void ncbi::CSeqDBLMDB::GetOidsForTaxIds(const std::set&, std::vector&, std::vector&) const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqdb_lmdb.cpp:655:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] 655 | for (int i=0; i < oids_set.size(); i++) { @@ -18164,7 +18200,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_desc.cpp -o autodef_source_desc.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_available_modifier.cpp -o autodef_available_modifier.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp -o autodef_mod_combo.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-comp/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_CSRA_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra/csraloader.cpp -o csraloader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_CSRA_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra/csraloader_impl.cpp -o csraloader_impl.o +/bin/rm -f libncbi_xloader_csra.a .libncbi_xloader_csra.a.stamp +ar cr libncbi_xloader_csra.a csraloader.o csraloader_impl.o +/bin/rm -f libncbi_xloader_csra.so .libncbi_xloader_csra.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsraread -lxobjmgr -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxser -lsequtil -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproduc/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp: In member function 'bool ncbi::objects::CAutoDefModifierCombo::AddQual(bool, int, bool)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_mod_combo.cpp:1033:10: warning: unused variable 'added' [-Wunused-variable] 1033 | bool added = false, rval = false; | ^~~~~ @@ -18175,45 +18217,32 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/tax4blastsqlite.cpp -o tax4blastsqlite.o /bin/rm -f libseqdb.so .libseqdb.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqdb.so -/bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqdb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/seqdb_writer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/services/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -j12 --jobserver-auth=fifo:/tmp/GMfifo4023485 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4023488 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo4023484 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_WGS_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs/wgsloader.cpp -o wgsloader.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_WGS_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs/wgsloader_impl.cpp -o wgsloader_impl.o +/bin/rm -f libncbi_xloader_wgs.a .libncbi_xloader_wgs.a.stamp +ar cr libncbi_xloader_wgs.a wgsloader.o wgsloader_impl.o +/bin/rm -f libncbi_xloader_wgs.so .libncbi_xloader_wgs.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsraread -lxobjmgr -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxser -lsequtil -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.1ible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_csra.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_csra.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_csra.a +/bin/ln -f .ncbi_xloader_csra-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_csra-static.dep +: libncbi_xloader_csra.so +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_csra.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_csra.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_csra.so +/bin/ln -f .ncbi_xloader_csra.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_csra.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' +6.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_wgs.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_wgs.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_wgs.a +/bin/ln -f .ncbi_xloader_wgs-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_wgs-static.dep +: libncbi_xloader_wgs.so +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_wgs.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_wgs.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_wgs.so +/bin/ln -f .ncbi_xloader_wgs.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_wgs.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' In file included from /usr/include/c++/14/algorithm:60, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:180, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_limits.hpp:61, @@ -18235,13 +18264,7 @@ /usr/include/c++/14/bits/stl_algobase.h:452:30: warning: 'void* __builtin_memmove(void*, const void*, long unsigned int)' writing between 9 and 9223372036854775800 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 452 | __builtin_memmove(__result, __first, sizeof(_Tp) * _Num); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANTIn file included from /usr/include/aarch64-linux-gnu/c++/14/bits/c++allocator.h:33, +In file included from /usr/include/aarch64-linux-gnu/c++/14/bits/c++allocator.h:33, from /usr/include/c++/14/bits/allocator.h:46, from /usr/include/c++/14/string:43, from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistl.hpp:216: @@ -18254,34 +18277,71 @@ /usr/include/c++/14/bits/new_allocator.h:151:55: note: at offset [-9223372036854775808, -1] into destination object of size [8, 9223372036854775800] allocated by 'operator new' 151 | return static_cast<_Tp*>(_GLIBCXX_OPERATOR_NEW(__n * sizeof(_Tp))); | ^ - -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o + -std=gnu++17 -shared -o libseqdb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o tax4blastsqlite.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlitewrapp -lsqlite3 -llmdb -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqdb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqdb.so +/bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqdb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/seqdb_writer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=writedb UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/blast/services/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_services_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test TMPL=blast_services_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo921668 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo921650 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer TMPL=writedb -j12 --jobserver-auth=fifo:/tmp/GMfifo921659 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb.cpp -o writedb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_impl.cpp -o writedb_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_volume.cpp -o writedb_volume.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_files.cpp -o writedb_files.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_isam.cpp -o writedb_isam.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_gimask.cpp -o writedb_gimask.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_convert.cpp -o writedb_convert.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_general.cpp -o writedb_general.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_column.cpp -o writedb_column.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/mask_info_registry.cpp -o mask_info_registry.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/taxid_set.cpp -o taxid_set.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_WGS_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs/wgsloader.cpp -o wgsloader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_WGS_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/wgs/wgsloader_impl.cpp -o wgsloader_impl.o -/bin/rm -f libncbi_xloader_wgs.a .libncbi_xloader_wgs.a.stamp -ar cr libncbi_xloader_wgs.a wgsloader.o wgsloader_impl.o -/bin/rm -f libncbi_xloader_wgs.so .libncbi_xloader_wgs.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsraread -lxobjmgr -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxser -lsequtil -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_wgs.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC wgsloader.o wgsloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_wgs.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_wgs.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_wgs.a -/bin/ln -f .ncbi_xloader_wgs-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_wgs-static.dep -: libncbi_xloader_wgs.so -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_wgs.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_wgs.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_wgs.so -/bin/ln -f .ncbi_xloader_wgs.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_wgs.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o +/bin/rm -f libid2_split.so .libid2_split.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2_split.so +/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2_split.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/reader_service.cpp -o reader_service.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/incr_time.cpp -o incr_time.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp -/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o +/bin/rm -f libncbi_xreader.so .libncbi_xreader.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lid2 -lseqsplit -lid1 -lseqset -lseq -lgeneral -lxser -lxconnect -lxcompress -lxutil -lxncbi -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader.a @@ -18291,20 +18351,17 @@ /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/cache/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xreader_cache UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/data_loaders/genbank/id1/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xreader_id1 UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd objtools/data_loaders/genbank/id2/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xreader_id2 UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -18312,26 +18369,21 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -j12 --jobserver-auth=fifo:/tmp/GMfifo4028496 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo4028510 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo4028525 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache TMPL=ncbi_xreader_cache -j12 --jobserver-auth=fifo:/tmp/GMfifo926409 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1 TMPL=ncbi_xreader_id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo926420 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2 TMPL=ncbi_xreader_id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo926427 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -in/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/split/split_exceptions.cpp -o split_exceptions.o -/bin/rm -f libid2_split.so .libid2_split.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libid2_split.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blob_splitter.o blob_splitter_params.o split_blob.o blob_splitter_impl.o blob_splitter_parser.o blob_splitter_maker.o id_range.o object_splitinfo.o asn_sizer.o annot_piece.o chunk_info.o size.o split_exceptions.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lseqsplit -lseqset -lseq -lgeneral -lxser -lxcompress -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libid2_split.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libid2_split.so -/bin/ln -f .id2_split.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.id2_split.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp: In member function 'void ncbi::CWriteDB_LMDB::x_CommitTransaction()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp:295:55: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 295 | unsigned int num_threads = GetCpuCount(); @@ -18341,24 +18393,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] - 1538 | const string& driver_name = - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' - 1539 | SPluginParams::SetDefaultValue(params, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ - 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 1541 | "bdb"); - | ~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_CSRA_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra/csraloader.cpp -o csraloader.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_XLOADER_CSRA_EXPORTS -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/sra/data_loaders/csra/csraloader_impl.cpp -o csraloader_impl.o -/bin/rm -f libncbi_xloader_csra.a .libncbi_xloader_csra.a.stamp -ar cr libncbi_xloader_csra.a csraloader.o csraloader_impl.o -/bin/rm -f libncbi_xloader_csra.so .libncbi_xloader_csra.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lsraread -lxobjmgr -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxser -lsequtil -lxutil -lxncbi -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_csra.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC csraloader.o csraloader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o +ile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_source_group.cpp -o autodef_source_group.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_feature_clause.cpp -o autodef_feature_clause.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.so .libxobjutil.so.stamp @@ -18367,85 +18402,75 @@ /bin/ln -f libxobjutil.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjutil.so /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -ible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsraread -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_csra.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_csra.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_csra.a -/bin/ln -f .ncbi_xloader_csra-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_csra-static.dep -: libncbi_xloader_csra.so -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_csra.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_csra.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_csra.so -/bin/ln -f .ncbi_xloader_csra.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_csra.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -cd objtools/seqmasks_io/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/dbindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/alnmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/blastdb_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/seqmasks_io/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=seqmasks_io UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/dbindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xalgoblastdbindex UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd objtools/alnmgr/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=alnmgr UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/blastdb_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blastdb_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo4038675 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo4038681 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo4038669 all -cd objtools/blast/gene_info_reader/demo/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=gene_info_reader LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo4038665 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndimake[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io TMPL=seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo927579 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex TMPL=xalgoblastdbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo927584 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo927608 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr TMPL=alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo927586 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format TMPL=blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo927597 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_cmdline_args.cpp -o mask_cmdline_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_bdb_reader.cpp -o mask_bdb_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_fasta_reader.cpp -o mask_fasta_reader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer.cpp -o mask_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_fasta.cpp -o mask_writer_fasta.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/rep/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo TMPL=gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo4038873 all +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/repmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_builders.cpp -o aln_builders.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_converters.cpp -o aln_converters.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_generators.cpp -o aln_generators.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_seqid.cpp -o aln_seqid.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_serial.cpp -o aln_serial.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alndimake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader.cpp -o bdbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/cached_sequence.cpp -o cached_sequence.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o @@ -18456,7 +18481,7 @@ /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqdb_demo LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' @@ -18465,8 +18490,19 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -j12 --jobserver-auth=fifo:/tmp/GMfifo4039916 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=seqdb_demo -j12 --jobserver-auth=fifo:/tmp/GMfifo928630 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp: In function 'ncbi::objects::SCacheInfo::TParams* ncbi::objects::GetDriverParams(SCacheInfo::TParams*)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1538:19: warning: possibly dangling reference to a temporary [-Wdangling-reference] + 1538 | const string& driver_name = + | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp:1539:39: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::SPluginParams::SetDefaultValue(params, std::__cxx11::basic_string(((const char*)"driver"), std::allocator()), ((const char*)"bdb"))' + 1539 | SPluginParams::SetDefaultValue(params, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ + 1540 | NCBI_GBLOADER_READER_CACHE_PARAM_DRIVER, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 1541 | "bdb"); + | ~~~~~~ ag.cpp -o alndiag.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp -o alnmap.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmapprint.cpp -o alnmapprint.o @@ -18474,79 +18510,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp -o alnmerger.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmix.cpp -o alnmix.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnpos_ci.cpp -o alnpos_ci.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/builmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -j12 --jobserver-auth=fifo:/tmp/GMfifo4041137 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o -/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp -ar cr libncbi_xreader_id1.a reader_id1.o -/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a -/bin/ln -f .ncbi_xreader_id1-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.so -/bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' -cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { - | ~~~~^~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -j12 --jobserver-auth=fifo:/tmp/GMfifo4041405 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o -/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp -ar cr libncbi_xreader_id2.a reader_id2.o -/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a -/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so -/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -j12 --jobserver-auth=fifo:/tmp/GMfifo4041517 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/buil/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp: In function 'const ncbi::blastdbindex::SIndexHeader ncbi::blastdbindex::ReadIndexHeader(void*) [with bool LEGACY = true]': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex.cpp:306:19: warning: variable 'tmp' set but not used [-Wunused-but-set-variable] 306 | unsigned long tmp; | ^~~ @@ -18585,58 +18549,51 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/readers/fasta.hpp:93:9: note: declared here 93 | fAllSeqIds NCBI_STD_DEPRECATED("This flag is no longer used in CFastaReader.") = 1<< 6, ///< Read Seq-ids past the first ^A (see note) | ^~~~~~~~~~ -In file included from /usr/include/c++/14/vector:66, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/seqalign/Dense_seg_.hpp:43, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/seqalign/Dense_seg.hpp:42, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/alnmgr/alnmap.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:36: -In member function 'std::vector<_Tp, _Alloc>::const_reference std::vector<_Tp, _Alloc>::operator[](size_type) const [with _Tp = int; _Alloc = std::allocator]', - inlined from 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:152:45: -/usr/include/c++/14/bits/stl_vector.h:1150:41: warning: 'l_anchor_index' may be used uninitialized [-Wmaybe-uninitialized] - 1150 | return *(this->_M_impl._M_start + __n); - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here - 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; - | ^~~~~~~~~~~~~~ +-mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o +/bin/rm -f libwritedb.so .libwritedb.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libwritedb.so +/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::CRef ncbi::objects::CAlnMap::CreateAlignFromRange(const std::vector&, ncbi::TSignedSeqPos, ncbi::TSignedSeqPos, ESegmentTrimFlag)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:1475:35: warning: comparison of integer expressions of different signedness: 'ncbi::objects::CAlnMap::TNumrow' {aka 'int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 1475 | for (TNumrow row = 0; row < selected_rows.size(); row++) { + | ~~~~^~~~~~~~~~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' +cd objtools/blast/seqdb_reader/demo/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=tax4blast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/gene_info_reader/demo/gene_info_reader_app.cpp -o gene_info_reader_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gene_info_reader_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lgene_info -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o gene_info_reader +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gene_info_reader /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gene_info_reader +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' +cd objtools/blast/seqdb_reader/test/ && NCBI_BUT_EXPENDABLE=' (but expendable)' /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqdb_perf LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] - 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { - | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here - 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { - | ~~^~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] - 311 | if (plus && prev_start_plus_len < start || - | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_services_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo TMPL=tax4blast -j12 --jobserver-auth=fifo:/tmp/GMfifo932377 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test TMPL=seqdb_perf -j12 --jobserver-auth=fifo:/tmp/GMfifo932397 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:85:69: warning: 'CSeqFormatterConfig' is deprecated [-Wdeprecated-declarations] 85 | CSeqFormatterConfig config = CSeqFormatterConfig()); @@ -18674,74 +18631,49 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/blast/blastdb_format/seq_writer.hpp:43:24: note: declared here 43 | struct NCBI_DEPRECATED CSeqFormatterConfig { | ^~~~~~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' --mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/build_db.cpp -o build_db.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/multisource_util.cpp -o multisource_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/criteria.cpp -o criteria.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/writedb_lmdb.cpp -o writedb_lmdb.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/seqidlist_writer.cpp -o seqidlist_writer.o -/bin/rm -f libwritedb.so .libwritedb.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libwritedb.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC writedb.o writedb_impl.o writedb_volume.o writedb_files.o writedb_isam.o writedb_gimask.o writedb_convert.o writedb_general.o writedb_column.o mask_info_registry.o taxid_set.o build_db.o multisource_util.o criteria.o writedb_lmdb.o seqidlist_writer.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjmgr -lblastdb -lseqset -lseq -lgeneral -lxser -lsequtil -lxutil -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pr0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libwritedb.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libwritedb.so -/bin/ln -f .writedb.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.writedb.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +roducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o +/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqmasks_io.so +/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +In file included from /usr/include/c++/14/vector:66, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidiag.hpp:44, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbidbg.hpp:47, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbiexpt.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/tempstr.hpp:38, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:39, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistd.hpp:37, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/serial/serialbase.hpp:35, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/seqalign/Dense_seg_.hpp:43, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objects/seqalign/Dense_seg.hpp:42, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objtools/alnmgr/alnmap.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:36: +In member function 'std::vector<_Tp, _Alloc>::const_reference std::vector<_Tp, _Alloc>::operator[](size_type) const [with _Tp = int; _Alloc = std::allocator]', + inlined from 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const' at /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:152:45: +/usr/include/c++/14/bits/stl_vector.h:1150:41: warning: 'l_anchor_index' may be used uninitialized [-Wmaybe-uninitialized] + 1150 | return *(this->_M_impl._M_start + __n); + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp: In member function 'ncbi::objects::CAlnMap::TSegTypeFlags ncbi::objects::CAlnMap::x_SetRawSegType(TNumrow, TNumseg) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmap.cpp:129:19: note: 'l_anchor_index' was declared here + 129 | TNumseg l_anchor_index, r_anchor_index, anchor_index; + | ^~~~~~~~~~~~~~ +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=writedb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4046113 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4046103 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4046135 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4046144 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo933330 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp: In member function 'std::string ncbi::blastdbindex::CSubjectMap_Factory_Base::extractSeqVector(TSeqData&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp:658:47: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] @@ -18751,18 +18683,14 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); | ^~~~~~~~ -roducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_int.cpp -o mask_writer_int.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_tab.cpp -o mask_writer_tab.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_seqloc.cpp -o mask_writer_seqloc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o -/bin/rm -f libseqmasks_io.so .libseqmasks_io.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libseqmasks_io.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjread -lxobjutil -lxobjmgr -lblastdb -lseqset -lseq -lxser -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libseqmasks_io.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libseqmasks_io.so -/bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.seqmasks_io.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/seqdb_demo.cpp -o seqdb_demo.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_demo.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_demo +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_demo /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_demo +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/blast/seqdb_writer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=writedb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' @@ -18771,8 +18699,36 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4046798 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test TMPL=writedb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo933722 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp: In member function 'void ncbi::objects::CAlnMixSegments::FillUnalignedRegions()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp:311:27: warning: suggest parentheses around '&&' within '||' [-Wparentheses] + 311 | if (plus && prev_start_plus_len < start || + | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +d/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnsegments.cpp -o alnsegments.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnseq.cpp -o alnseq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec.cpp -o alnvec.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvec_iterator.cpp -o alnvec_iterator.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp -o alnvecprint.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/pairwise_aln.cpp -o pairwise_aln.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-pr/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'void CSeqDBPerfApp::x_UpdateMemoryUsage(int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:114:23: warning: 'bool ncbi::GetMemoryUsage(size_t*, size_t*, size_t*)' is deprecated [-Wdeprecated-declarations] + 114 | if (GetMemoryUsage(&mu.total, &mu.resident, &mu.shared)) { + | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:36: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:511:13: note: declared here + 511 | extern bool GetMemoryUsage(size_t* total, size_t* resident, size_t* shared); + | ^~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp: In member function 'int CSeqDBPerfApp::x_ScanDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp:154:31: warning: comparison of integer expressions of different signedness: 'ssize_t' {aka 'long int'} and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 154 | for (ssize_t i = 0; i < oids2iterate.size(); i++) { + | ~~^~~~~~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/services/unit_test/blast_services_test.cpp -o blast_services_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_services_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblast_services -lxnetblastcli -lxnetblast -lseqdb -lblastdb -lscoremat -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_services_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_services_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_services_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp: In member function 'void ncbi::objects::CAlnMixMerger::x_Merge()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:691:40: warning: 'second_row_fits' may be used uninitialized [-Wmaybe-uninitialized] 691 | second_row_fits != eIgnoreMatch) { @@ -18780,63 +18736,49 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnmerger.cpp:155:20: note: 'second_row_fits' was declared here 155 | TSecondRowFits second_row_fits; | ^~~~~~~~~~~~~~~ -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' -cd algo/winmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' +cd algo/winmask/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xalgowinmask UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/demo/tax4blast.cpp -o tax4blast.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tax4blast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lsqlitewrapp -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lsqlite3 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tax4blast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tax4blast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tax4blast +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -j12 --jobserver-auth=fifo:/tmp/GMfifo4048057 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' +cd objtools/data_loaders/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xloader_blastdb_rmt UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask TMPL=xalgowinmask -j12 --jobserver-auth=fifo:/tmp/GMfifo934724 all +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb TMPL=ncbi_xloader_blastdb_rmt -j12 --jobserver-auth=fifo:/tmp/GMfifo934808 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker.cpp -o seq_masker.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean.cpp -o seq_masker_score_mean.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_mean_glob.cpp -o seq_masker_score_mean_glob.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_score_min.cpp -o seq_masker_score_min.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_util.cpp -o seq_masker_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbmake[5]: warning: -j12 forced in submake: resetting jobserver mode. +i-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window.cpp -o seq_masker_window.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_ambig.cpp -o seq_masker_window_ambig.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern.cpp -o seq_masker_window_pattern.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_window_pattern_ambig.cpp -o seq_masker_window_pattern_ambig.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_factory.cpp -o seq_masker_ostat_factory.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat.cpp -o seq_masker_ostat.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/incmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o -/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp -/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp -ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a -/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so -/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' -cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo4049472 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/inc/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp: In member function 'void ncbi::objects::CAlnVecPrinter::PopsetStyle(int, EAlgorithm)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:136:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 136 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ @@ -18844,6 +18786,31 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alnvecprint.cpp:300:64: warning: suggest parentheses around '&&' within '||' [-Wparentheses] 300 | if (left_seg < 0 || seg > right_seg && right_seg > 0) { | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o +/bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp +ar cr libncbi_xreader_id2.a reader_id2.o +/bin/rm -f libncbi_xreader_id2.so .libncbi_xreader_id2.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id2.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid2 -lseqsplit -lseq -lxser -lxconnect -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.a +/bin/ln -f .ncbi_xreader_id2-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id2.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id2.so +/bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id2.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqdb_lmdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_lmdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo936235 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_fasta.cpp -o sequence_istream_fasta.o /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/sequence_istream_bdb.cpp -o sequence_istream_bdb.o @@ -18851,17 +18818,56 @@ /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_factory.cpp -o dbindex_factory.o /usr/bin/g++ -std=gnu++17 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o /bin/rm -f libxalgoblastdbindex.so .libxalgoblastdbindex.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { - | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ +/usr/bin/g++ -std=gnu++17 -shared -o libxalgoblastdbindex.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_reader/test/seqdb_perf.cpp -o seqdb_perf.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_perf.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqdb -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seqdb_perf +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_perf /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_perf +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqdb_tax4blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_tax4blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo937053 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. ds/c++/BUILD/lib -lblast -lseqdb -lxobjread -lxobjutil -lxobjmgr -lseqset -lseq -lxser -lxutil -lxncbi -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxalgoblastdbindex.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalgoblastdbindex.so /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' -cd algo/blast/dbindex/makeindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/seqdb_reader/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqdb_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader TMPL=seqdb_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo937198 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o +/bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp +ar cr libncbi_xreader_id1.a reader_id1.o +/bin/rm -f libncbi_xreader_id1.so .libncbi_xreader_id1.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_id1.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lid1 -lseq -lgeneral -lxser -lxconnect -lxutil -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.a +/bin/ln -f .ncbi_xreader_id1-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_id1.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_id1.so +/bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_id1.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' +cd algo/blast/dbindex/makeindex/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=makeindex LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' @@ -18870,15 +18876,33 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo4053633 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex TMPL=makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo937723 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -lude /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/reader_cache.cpp -o reader_cache.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o +/bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp +ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o +/bin/rm -f libncbi_xreader_cache.so .libncbi_xreader_cache.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lxncbi -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader -lxobjmgr -lseq -lxser -lxncbi -lm -lpthread ) +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.a +/bin/ln -f .ncbi_xreader_cache-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache-static.dep +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xreader_cache.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xreader_cache.so +/bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xreader_cache.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' +cd objtools/data_loaders/genbank/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=ncbi_xloader_genbank UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/seq_writer.cpp -o seq_writer.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_dataextract.cpp -o blastdb_dataextract.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/blastdb_formatter.cpp -o blastdb_formatter.o @@ -18888,9 +18912,11 @@ /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libblastdb_format.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libblastdb_format.so /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastdb_format.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank TMPL=ncbi_xloader_genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo937911 all +' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' -cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/blast/blastdb_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdb_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' @@ -18899,32 +18925,25 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4056073 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test TMPL=blastdb_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo938041 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +lude /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_ascii.cpp -o seq_masker_ostat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_ascii.cpp -o seq_masker_istat_ascii.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_simple.cpp -o seq_masker_uset_simple.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_factory.cpp -o seq_masker_istat_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_bin.cpp -o seq_masker_ostat_bin.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_array.cpp -o seq_masker_uset_array.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp: In member function 'std::string& ncbi::CSparseAln::GetAlnSeqString(ncbi::IAlnExplorer::TNumrow, std::string&, const ncbi::IAlnExplorer::TSignedRange&, bool) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp:702:46: warning: comparison of integer expressions of different signedness: 'ncbi::COpenRange::position_type' {aka 'int'} and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 702 | if (translate && aln_range.GetLength() >= trim_from + trim_to) { + | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_bin.cpp -o seq_masker_istat_bin.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt.cpp -o seq_masker_ostat_opt.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_ascii.cpp -o seq_masker_ostat_opt_ascii.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_uset_hash.cpp -o seq_masker_uset_hash.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat_oascii.cpp -o seq_masker_istat_oascii.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_ostat_opt_bin.cpp -o seq_masker_ostat_opt_bin.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o -/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so -/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/bmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test.cpp -o writedb_lmdb_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_lmdb_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -19114,11 +19133,22 @@ 77 | class NCBI_BLASTDB_FORMAT_EXPORT NCBI_DEPRECATED CSeqFormatter | ^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test.cpp -o seqdb_tax4blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_tax4blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lsqlitewrapp -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_tax4blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_tax4blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_tax4blast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/bdbloader_rmt.cpp -o bdbloader_rmt.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o +/bin/rm -f libncbi_xloader_blastdb_rmt.so .libncbi_xloader_blastdb_rmt.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_blastdb_rmt.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC bdbloader_rmt.o remote_blastdb_adapter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_blastdb -lblast_services -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libncbi_xloader_blastdb_rmt.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_blastdb_rmt.so +/bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_blastdb_rmt.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' otector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_aln.cpp -o sparse_aln.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/sparse_ci.cpp -o sparse_ci.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/alntext.cpp -o alntext.o @@ -19126,20 +19156,11 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o /bin/rm -f libxalnmgr.so .libxalnmgr.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libxalnmgr.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxobjutil -lxobjmgr -lseqset -lseq -lxser -ltables -lxncbi -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -16.0+ds/c++/BUILD/lib +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxalnmgr.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxalnmgr.so /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] - 130 | string id_str = sequence::GetTitle( bsh ); - | ~~~~~~~~~~~~~~~~~~^~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here - 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); - | ^~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/main.cpp -o main.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/dbindex/makeindex/mkindex_app.cpp -o mkindex_app.o @@ -19148,6 +19169,29 @@ /bin/ln -f makembindex /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makembindex make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp: In member function 'virtual bool ncbi::CWinMaskUtil::CIdSet_TextMatch::find(const ncbi::objects::CBioseq_Handle&) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:130:39: warning: 'std::string ncbi::objects::sequence::GetTitle(const ncbi::objects::CBioseq_Handle&, TGetTitleFlags)' is deprecated [-Wdeprecated-declarations] + 130 | string id_str = sequence::GetTitle( bsh ); + | ~~~~~~~~~~~~~~~~~~^~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_util.cpp:37: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:290:8: note: declared here + 290 | string GetTitle(const CBioseq_Handle& hnd, TGetTitleFlags flags = 0); + | ^~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_lmdb_unit_test.cpp -o seqdb_lmdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_lmdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_lmdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_lmdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_lmdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o blastdb_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/win_mask_config.cpp -o win_mask_config.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.so .libxalgowinmask.so.stamp @@ -19157,7 +19201,7 @@ /bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xalgowinmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' -cd algo/blast/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xblast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' @@ -19166,7 +19210,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -j12 --jobserver-auth=fifo:/tmp/GMfifo4070570 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api TMPL=xblast -j12 --jobserver-auth=fifo:/tmp/GMfifo944329 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux.cpp -o blast_aux.o @@ -19180,15 +19224,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/disc_nucl_options.cpp -o disc_nucl_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_prot_options.cpp -o blast_prot_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_options.cpp -o psiblast_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_writer_unit_test.cpp -o seq_writer_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/blastdb_format/unit_test/seq_formatter_unit_test.cpp -o seq_formatter_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seq_writer_unit_test.o seq_formatter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastdb_format -lxobjutil -lseqdb -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o blastdb_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=6/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp: In member function 'char* ncbi::blast::CBlastOptionsHandle::GetFilterString() const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_options_handle.cpp:100:35: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] 100 | return m_Opts->GetFilterString(); /* NCBI_FAKE_WARNING */ | ~~~~~~~~~~~~~~~~~~~~~~~^~ @@ -19240,6 +19276,24 @@ /usr/include/c++/14/bits/stl_vector.h:1090:7: note: declared here 1090 | empty() const _GLIBCXX_NOEXCEPT | ^~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ +ast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psibl2seq.cpp -o psibl2seq.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_db_adapter.cpp -o local_db_adapter.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast.cpp -o psiblast.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/writedb_unit_test.cpp -o writedb_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/blast/seqdb_writer/unit_test/criteria_unit_test.cpp -o criteria_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie writedb_unit_test.o criteria_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lwritedb -lseqdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lblastdb -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o writedb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f writedb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/writedb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbloader.cpp -o gbloader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/gbnative.cpp -o gbnative.o @@ -19247,9 +19301,14 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader.cpp -o psg_loader.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp -/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread ) +/bin/rm -f libncbi_xloader_genbank.so .libncbi_xloader_genbank.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_im2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_iteration.cpp -o psiblast_iteration.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psi_pssm_input.cpp -o psi_pssm_input.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/msa_pssm_input.cpp -o msa_pssm_input.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_aux_priv.cpp -o psiblast_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blastpl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader -lid2 -lpsg_client -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxconnserv -lxcompress -lxser -lxthrserv -lxxconnect2 -lsequtil -lxconnect -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread || (echo "project_tree_builder's suggestions failed. Trying original settings:"; echo /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread ; /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xreader_cache -lncbi_xreader_id1 -lncbi_xreader_id2 -lid2 -lid1 -lncbi_xreader -lpsg_client -lxconnserv -lxxconnect2 -lxobjmgr -lseq -lxutil -lxncbi -luv -lnghttp2 -lz -lbz2 -lzstd -lm -lpthread ) /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank-static.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank-static.dep @@ -19258,52 +19317,48 @@ /bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.ncbi_xloader_genbank.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' -cd objtools/align_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null -cd objtools/simple/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/align_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=align_format UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +cd objtools/simple/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xobjsimple UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/dustmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CLocalBlast::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_blast.cpp:207:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 207 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -cd app/winmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +cd app/dustmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=dustmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/winmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=winmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo4073761 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -j12 --jobserver-auth=fifo:/tmp/GMfifo4073765 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format TMPL=align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo951737 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple TMPL=xobjsimple -j12 --jobserver-auth=fifo:/tmp/GMfifo951743 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo951748 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo4073775 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker TMPL=dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo4073772 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker TMPL=winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo951759 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/format_flags.cpp -o format_flags.o @@ -19312,46 +19367,6 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp -o showalign.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/tabular.cpp -o tabular.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reprodmake[5]: warning: -j12 forced in submake: resetting jobserver mode. -ast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/repeats_filter_cxx.cpp -o repeats_filter_cxx.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_mtlock.cpp -o blast_mtlock.o -/usr/bin/g++ -std=gnu++17 -c -Wall 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psiblast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/psiblast_impl.cpp -o psiblast_impl.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -Omake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 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-D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_aux_priv.cpp -o blast_aux_priv.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_advprot_options.cpp -o blast/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp: In member function 'void ncbi::align_format::CVecscreen::x_MergeSeqalign(ncbi::objects::CSeq_align_set&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp:448:35: warning: unused variable 'da' [-Wunused-variable] - 448 | const CSeq_align& da = *x_OrigAlignsById[*di]; - | ^~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp:2113:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] - 2113 | } catch (CException e){ - | ^ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static void ncbi::align_format::CAlignFormatUtil::AddSpace(ncbi::CNcbiOstream&, size_t)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp:810:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] - 810 | for(auto i=0; idimensions->query_length && | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp: In member function 'ncbi::CRef ncbi::blast::CRemoteBlast::GetResultSet()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); - | ^ _advprot_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 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-c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/rps_aux.cpp -o rps_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/search_strategy.cpp -o search_strategy.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp: In static member function 'static void ncbi::align_format::CAlignFormatUtil::AddSpace(ncbi::CNcbiOstream&, size_t)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/align_format_util.cpp:810:20: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long unsigned int'} [-Wsign-compare] + 810 | for(auto i=0; i ncbi::blast::CRemoteBlast::GetResultSet()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/remote_blast.cpp:2238:99: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 2238 | (new CBlastAncillaryData(lambdas, Ks, Hs, effective_search_space, m_Task == "psiblast")); + | ^ +ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+dsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/simple/simple_om.cpp -o simple_om.o +/bin/rm -f libxobjsimple.so .libxobjsimple.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxobjsimple.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC simple_om.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lncbi_xloader_genbank -lxobjmgr -lseq -lxncbi -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libxobjsimple.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxobjsimple.so +/bin/ln -f .xobjsimple.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjsimple.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp: In member function 'void ncbi::align_format::CDisplaySeqalign::DisplaySeqalign(ncbi::CNcbiOstream&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/showalign.cpp:2113:33: warning: catching polymorphic type 'class ncbi::CException' by value [-Wcatch-value=] + 2113 | } catch (CException e){ + | ^ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_app.cpp -o win_mask_app.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/winmasker/win_mask_sdust_masker.cpp -o win_mask_sdust_masker.o @@ -19383,13 +19425,7 @@ /bin/ln -f windowmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/windowmasker make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -ds/c++/src/algo/blast/api/setup_factory.cpp -o setup_factory.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/prelim_stage.cpp -o prelim_stage.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/traceback_stage.cpp -o traceback_stage.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/uniform_search.cpp -o uniform_search.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/local_search.cpp -o local_search.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_results.cpp -o blast_results.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+dsmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/main.cpp -o main.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=dustmasker /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/dustmasker/dust_mask_app.cpp -o dust_mask_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie main.o dust_mask_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lxalgodustmask -lseqmasks_io -lxobjread -lvariation -lsubmit -lxlogging -lxobjutil -lseqdb -lblastdb -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o dustmasker @@ -19407,14 +19443,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/objmgrfree_query_data.cpp -o objmgrfree_query_data.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/bioseq_extract_data_priv.cpp -o bioseq_extract_data_priv.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/effsearchspace_calc.cpp -o effsearchspace_calc.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_seqinfosrc_aux.cpp -o blast_seqinfosrc_aux.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_dbindex.cpp -o blast_dbindex.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_cxx.cpp -o split_query_cxx.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/split_query_aux_priv.cpp -o split_query_aux_priv.o @@ -19426,7 +19455,23 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/cdd_pssm_input.cpp -o cdd_pssm_input.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/deltablast_options.cpp -o deltablast_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/deltablast.cpp -o deltablast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Ducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -Dmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/seqdb_reader/seqdb_unit_test.cpp -o seqdb_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqdb_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lseqdb -lwritedb -lxobjutil -lblastdb -lxobjread -lvariation -lsubmit -lxlogging -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o seqdb_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqdb_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqdb_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 148 | tmp_pair, 0)); + | ^ +NCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o +/bin/rm -f libxblast.so .libxblast.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/rucible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/vectorscreen.cpp -o vectorscreen.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/seqalignfilter.cpp -o seqalignfilter.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/taxFormat.cpp -o taxFormat.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o @@ -19437,7 +19482,7 @@ /bin/ln -f .align_format.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.align_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' -cd objtools/align_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/align_format/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=align_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' @@ -19446,7 +19491,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4084609 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test TMPL=align_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo965051 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/showdefline_unit_test.cpp -o showdefline_unit_test.o @@ -19454,41 +19499,32 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/blast_test_util.cpp -o blast_test_util.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/vectorscreen_unit_test.cpp -o vectorscreen_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/tabularinof_unit_test.cpp -o tabularinof_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp: In member function 'int ncbi::blast::CMagicBlast::x_Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp:148:65: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 148 | tmp_pair, 0)); - | ^ -NCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast_options.cpp -o magicblast_options.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/magicblast.cpp -o magicblast.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_node.cpp -o blast_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o -/bin/rm -f libxblast.so .libxblast.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libxblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-patheproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lblast -lseqdb -lseqset -lseq -lgeneral -lxser -lxconnect -lsequtil -ltables -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib /bin/ln -f libxblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libxblast.so /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -cd algo/blast/blastinput/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/proteinkmer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/blastinput/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=blastinput UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/proteinkmer/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=proteinkmer UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo4085511 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo4085513 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput TMPL=blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo965308 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer TMPL=proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo965312 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' @@ -19517,23 +19553,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/blastkmerutils.cpp:806:38: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] 806 | if (last_oid == *i) | ~~~~~~~~~^~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 + 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); + | ^ _LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/tblastx_args.cpp -o tblastx_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/psiblast_args.cpp -o psiblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpsblast_args.cpp -o rpsblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/rpstblastn_args.cpp -o rpstblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastn_args.cpp -o igblastn_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp -o igblastp_args.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranc/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp: In function 'ncbi::CRef s_MakeEmptyResults(ncbi::CRef, const ncbi::blast::CBlastOptions&, ncbi::CRef, ncbi::blast::TSearchMessages&)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp:132:116: note: parameter passing for argument of type 'std::pair' when C++17 is enabled changed to match C++14 in GCC 10.1 - 132 | CRef tmp_ancillary_data(new CBlastAncillaryData(tmp_pair, tmp_pair, tmp_pair, 0)); - | ^ -/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' -uild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbrancuild/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/mhfile.cpp -o mhfile.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/pearson.cpp -o pearson.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.so .libproteinkmer.so.stamp @@ -19543,61 +19573,58 @@ /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -cd algo/blast/igblast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/igblast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=igblast UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/proteinkmer/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=proteinkmer_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=aalookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=aascan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdiag_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastengine_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastextend_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastfilter_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19608,45 +19635,37 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo4095541 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095547 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast TMPL=igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo970494 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095543 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970508 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test TMPL=proteinkmer_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970498 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095553 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095584 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aascan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095550 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095574 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=aalookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970502 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970522 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastdiag_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970515 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastextend_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970534 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095603 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastfilter_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970540 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastengine_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095565 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4095595 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo970548 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19657,6 +19676,23 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/igblastp_args.cpp:67:16: warning: unused variable 'kFilterByDefault' [-Wunused-variable] 67 | const bool kFilterByDefault = false; | ^~~~~~~~~~~~~~~~ +/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/align_format/unit_test/aln_printer_unit_test.cpp -o aln_printer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie showdefline_unit_test.o showalign_unit_test.o blast_test_util.o vectorscreen_unit_test.o tabularinof_unit_test.o aln_printer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxalnmgr -lxcgi -lxhtml -lseqmasks_io -lseqdb -lblast_services -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o align_format_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f align_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/align_format_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastoptions_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastoptions_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo971542 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp: In member function 'virtual void ncbi::blast::CMapperMTArgs::ExtractAlgorithmOptions(const ncbi::CArgs&, ncbi::blast::CBlastOptions&)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp:205:59: warning: 'unsigned int ncbi::GetCpuCount()' is deprecated [-Wdeprecated-declarations] 205 | const int kMaxValue = static_cast(GetCpuCount()); @@ -19671,6 +19707,13 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbi_system.hpp:479:14: note: declared here 479 | unsigned int GetCpuCount(void) | ^~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] + 759 | Int4 query_length = query_blk->length; + | ^~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] + 760 | Int4 subject_length = subject_blk->length; + | ^~~~~~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:35: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp: In member function 'void blastoptions::RemoteOptionsTest::test_method()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp:73:47: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] @@ -19759,23 +19802,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp: In member function 'void CompressedAascan::CompressedScanHitsFound::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:759:10: warning: unused variable 'query_length' [-Wunused-variable] - 759 | Int4 query_length = query_blk->length; - | ^~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp:760:10: warning: unused variable 'subject_length' [-Wunused-variable] - 760 | Int4 subject_length = subject_blk->length; - | ^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] - 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ - | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, - from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here - 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); - | ^~~~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastdiag_unit_test.cpp -o blastdiag_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdiag_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastdiag_unit_test @@ -19783,7 +19809,7 @@ /bin/ln -f blastdiag_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdiag_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastsetup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19792,8 +19818,18 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4102906 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blastsetup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo974606 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp: In member function 'void blastengine::testBlastpPrelimSearch::test_method()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:452:29: warning: 'void ncbi::blast::CBlastOptions::SetFilterString(const char*, bool)' is deprecated [-Wdeprecated-declarations] + 452 | options->SetFilterString("L"); /* NCBI_FAKE_WARNING */ + | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options_handle.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_nucl_options.hpp:36, + from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp:53: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:180:26: note: declared here + 180 | NCBI_DEPRECATED void SetFilterString(const char* f, bool clear = true); + | ^~~~~~~~~~~~~~~ h-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/deltablast_args.cpp -o deltablast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/magicblast_args.cpp -o magicblast_args.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/kblastp_args.cpp -o kblastp_args.o @@ -19805,7 +19841,7 @@ /bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.blastinput.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=gapinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19814,70 +19850,67 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4103536 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gapinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo975319 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blasthits_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastextend_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=gencode_singleton_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo977357 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o +/bin/rm -f libigblast.so .libigblast.so.stamp +/usr/bin/g++ -std=gnu++17 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib +/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libigblast.so +/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=hspfilter_besthit_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o aascan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4104600 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=gencode_singleton_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4104589 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o proteinkmer_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=hspfilter_culling_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_besthit_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo977477 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastextend_unit_test.cpp -o blastextend_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastextend_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastextend_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastextend_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastextend_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4105053 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp -o aascan_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aascan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o aascan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f aascan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aascan_unit_test +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=hspstream_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19886,15 +19919,20 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4105325 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gapinfo_unit_test.cpp -o gapinfo_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gapinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -o gapinfo_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gapinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gapinfo_unit_test +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspfilter_culling_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo977560 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o aalookup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=linkhsp_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=hspstream_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo977622 all make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. @@ -19904,7 +19942,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4105433 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=linkhsp_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo977734 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastengine_unit_test.cpp -o blastengine_unit_test.o @@ -19913,7 +19951,7 @@ /bin/ln -f blastengine_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastengine_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=msa2pssm_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19922,16 +19960,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4105639 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=msa2pssm_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo979137 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/aalookup_unit_test.cpp -o aalookup_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie aalookup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o aalookup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f aalookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/aalookup_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blasthits_unit_test.cpp -o blasthits_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blasthits_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=ntlookup_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19940,27 +19978,25 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4105790 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o -/bin/rm -f libigblast.so .libigblast.so.stamp -/usr/bin/g++ -std=gnu++17 -shared -o libigblast.so -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIC igblast.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxconnect -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -/bin/ln -f libigblast.so /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib/libigblast.so -/bin/ln -f .igblast.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.igblast.dep -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/proteinkmer/unit_test/proteinkmer_unit_test.cpp -o proteinkmer_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie proteinkmer_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o proteinkmer_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f proteinkmer_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/proteinkmer_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntlookup_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo979395 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=ntscan_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4106906 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=ntscan_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo979500 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_culling_unit_test.cpp -o hspfilter_culling_unit_test.o @@ -19969,7 +20005,7 @@ /bin/ln -f hspfilter_culling_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_culling_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=optionshandle_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -19978,26 +20014,34 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4108977 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=optionshandle_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo981686 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o gencode_singleton_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastoptions_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastoptions_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=phiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo982040 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspfilter_besthit_unit_test.cpp -o hspfilter_besthit_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspfilter_besthit_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o hspfilter_besthit_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f hspfilter_besthit_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspfilter_besthit_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=prelimsearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20006,24 +20050,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=phiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4109191 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4109204 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=prelimsearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo982337 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastoptions_unit_test.cpp -o blastoptions_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastoptions_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastoptions_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastoptions_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastoptions_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp -o gencode_singleton_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie gencode_singleton_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o gencode_singleton_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f gencode_singleton_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/gencode_singleton_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=psibl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20032,16 +20068,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4109746 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psibl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo983114 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o msa2pssm_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/msa2pssm_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o hspstream_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspstream_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=psiblast_iteration_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20050,17 +20087,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4110553 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_iteration_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo983258 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_unit_test.cpp -o hspstream_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/hspstream_test_util.cpp -o hspstream_test_util.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie hspstream_unit_test.o hspstream_test_util.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o hspstream_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f hspstream_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/hspstream_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/msa2pssm_unit_test.cpp -o msa2pssm_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie msa2pssm_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o msa2pssm_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f msa2pssm_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/msa2pssm_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=pssmcreate_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20069,7 +20105,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4110998 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmcreate_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo983766 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/linkhsp_unit_test.cpp -o linkhsp_unit_test.o @@ -20078,7 +20114,7 @@ /bin/ln -f linkhsp_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/linkhsp_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=pssmenginefreqratios_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20087,7 +20123,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4112346 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=pssmenginefreqratios_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo983887 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntlookup_unit_test.cpp -o ntlookup_unit_test.o @@ -20096,7 +20132,7 @@ /bin/ln -f ntlookup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntlookup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=querydata_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20105,16 +20141,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4114110 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=querydata_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo985212 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o phiblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastfilter_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastfilter_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=queryinfo_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20123,16 +20159,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo985359 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_iteration_unit_test.cpp -o psiblast_iteration_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_iteration_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o psiblast_iteration_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f psiblast_iteration_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_iteration_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=queryinfo_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4115178 all make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=remote_blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20141,16 +20177,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4115271 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=remote_blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo986107 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastfilter_unit_test.cpp -o blastfilter_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastfilter_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastfilter_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastfilter_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastfilter_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/phiblast_unit_test.cpp -o phiblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie phiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o phiblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f phiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/phiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=rmblast_blasthits_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20159,16 +20195,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4115405 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_blasthits_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo986206 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o psibl2seq_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o prelimsearch_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=rmblast_traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20177,52 +20213,52 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4115798 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rmblast_traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo986394 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastsetup_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastsetup_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psibl2seq_unit_test.cpp -o psibl2seq_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psibl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o psibl2seq_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psibl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psibl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=rps_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o ntscan_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4116565 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/prelimsearch_unit_test.cpp -o prelimsearch_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie prelimsearch_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o prelimsearch_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f prelimsearch_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/prelimsearch_unit_test +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=scoreblk_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=rps_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo987570 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4117337 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=scoreblk_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo987617 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/ntscan_unit_test.cpp -o ntscan_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie ntscan_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o ntscan_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f ntscan_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/ntscan_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blastsetup_unit_test.cpp -o blastsetup_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastsetup_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastsetup_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastsetup_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastsetup_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=search_strategy_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20231,7 +20267,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4117782 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=search_strategy_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo987758 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmenginefreqratios_unit_test.cpp -o pssmenginefreqratios_unit_test.o @@ -20240,7 +20276,7 @@ /bin/ln -f pssmenginefreqratios_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmenginefreqratios_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqinfosrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20249,16 +20285,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4118663 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqinfosrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo988364 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rmblast_blasthits_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o optionshandle_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seqsrc_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20267,36 +20303,54 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4120132 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=seqsrc_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo988955 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/optionshandle_unit_test.cpp -o optionshandle_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie optionshandle_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o optionshandle_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f optionshandle_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/optionshandle_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rmblast_traceback_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=setupfactory_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_blasthits_unit_test.cpp -o rmblast_blasthits_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_blasthits_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rmblast_blasthits_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rmblast_blasthits_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_blasthits_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4121658 all +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=setupfactory_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo989590 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_unit_test.cpp -o pssmcreate_unit_test.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssm_test_util.cpp -o pssm_test_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/pssmcreate_cdd_unit_test.cpp -o pssmcreate_cdd_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie pssmcreate_unit_test.o pssm_test_util.o pssmcreate_cdd_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o pssmcreate_unit_test +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo989633 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o pssmcreate_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f pssmcreate_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/pssmcreate_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=split_query_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20305,26 +20359,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=split_query_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4122446 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo989834 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o querydata_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=stat_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/queryinfo_unit_test.cpp -o queryinfo_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie queryinfo_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o queryinfo_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f queryinfo_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/queryinfo_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=subj_ranges_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20333,24 +20377,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=stat_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4122935 all -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4122962 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=subj_ranges_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo990272 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rmblast_traceback_unit_test.cpp -o rmblast_traceback_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rmblast_traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rmblast_traceback_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rmblast_traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rmblast_traceback_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/querydata_unit_test.cpp -o querydata_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie querydata_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o querydata_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f querydata_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/querydata_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=traceback_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20359,16 +20395,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4124303 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=traceback_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo990492 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rps_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o scoreblk_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=tracebacksearch_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20377,16 +20413,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4124556 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=tracebacksearch_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo990709 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/scoreblk_unit_test.cpp -o scoreblk_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie scoreblk_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o scoreblk_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f scoreblk_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/scoreblk_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o stat_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/stat_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=uniform_search_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20395,16 +20431,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4125376 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=uniform_search_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo990961 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o seqinfosrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/rps_unit_test.cpp -o rps_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rps_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o rps_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rps_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rps_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=version_reference_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -20413,25 +20449,43 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo4126008 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=version_reference_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo991500 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/stat_unit_test.cpp -o stat_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie stat_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o stat_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f stat_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/stat_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o search_strategy_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqinfosrc_unit_test.cpp -o seqinfosrc_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqinfosrc_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o seqinfosrc_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqinfosrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqinfosrc_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=convert2blastmask LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/segmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -j12 --jobserver-auth=fifo:/tmp/GMfifo4126123 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=convert2blastmask -j12 --jobserver-auth=fifo:/tmp/GMfifo991747 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo991767 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/setupfactory_unit_test.cpp -o setupfactory_unit_test.o @@ -20440,23 +20494,17 @@ /bin/ln -f setupfactory_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/setupfactory_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/segmasker/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=segmasker LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/segmasker TMPL=segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo4126504 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_unit_test.cpp -o seqsrc_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/seqsrc_mock.cpp -o seqsrc_mock.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc1_unit_test.cpp -o mockseqsrc1_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/mockseqsrc2_unit_test.cpp -o mockseqsrc2_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqsrc_unit_test.o seqsrc_mock.o mockseqsrc1_unit_test.o mockseqsrc2_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o seqsrc_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqsrc_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/subj_ranges_unit_test.cpp -o subj_ranges_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie subj_ranges_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o subj_ranges_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f subj_ranges_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20464,18 +20512,6 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/search_strategy_unit_test.cpp -o search_strategy_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie search_strategy_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o search_strategy_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f search_strategy_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/search_strategy_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -algoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o seqsrc_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seqsrc_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seqsrc_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/remote_blast_unit_test.cpp -o remote_blast_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie remote_blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o remote_blast_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f remote_blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin @@ -20504,19 +20540,19 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o uniform_search_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/traceback_unit_test.cpp -o traceback_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie traceback_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o traceback_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f traceback_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/traceback_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o split_query_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=convert2blastmask /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/convert2blastmask.cpp -o convert2blastmask.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie convert2blastmask.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o convert2blastmask @@ -20525,10 +20561,10 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/uniform_search_unit_test.cpp -o uniform_search_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie uniform_search_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o uniform_search_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f uniform_search_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/uniform_search_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/split_query_unit_test.cpp -o split_query_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie split_query_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o split_query_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f split_query_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/split_query_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' @@ -20541,7 +20577,7 @@ /bin/ln -f .efetch.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.efetch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -cd objtools/edit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/edit/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=edit UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' @@ -20550,7 +20586,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -j12 --jobserver-auth=fifo:/tmp/GMfifo4179955 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit TMPL=edit -j12 --jobserver-auth=fifo:/tmp/GMfifo1026539 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gene_utils.cpp -o gene_utils.o @@ -20558,7 +20594,23 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp -o promote.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/autodef_with_tax.cpp -o autodef_with_tax.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/field_handler.cpp -o field_handler.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/apply_object.cpp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] + 224 | CCdregion_translate::TranslateCdregion(data, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ + 225 | feat, + | ~~~~~ + 226 | x_Scope(), + | ~~~~~~~~~~ + 227 | include_stop, + | ~~~~~~~~~~~~~ + 228 | remove_trailingX); + | ~~~~~~~~~~~~~~~~~ +In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here + 966 | static void TranslateCdregion(string& prot, + | ^~~~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp: In constructor 'ncbi::objects::edit::CSeqIdGuesser::CSeqIdGuesser(ncbi::objects::CSeq_entry_Handle)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp:92:48: warning: 'static ncbi::SIZE_TYPE ncbi::NStr::Find(ncbi::CTempString, ncbi::CTempString, ncbi::SIZE_TYPE, ncbi::SIZE_TYPE, EOccurrence, ECase)' is deprecated [-Wdeprecated-declarations] 92 | size_t pos = NStr::Find(tag_str, "/", 0, string::npos, NStr::eLast); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -20577,22 +20629,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp: In member function 'void ncbi::objects::edit::CPromote::x_PromoteCdregion(ncbi::objects::CSeq_feat&, TRnaMap*) const': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:224:51: warning: 'static void ncbi::objects::CCdregion_translate::TranslateCdregion(std::string&, const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, bool, bool, bool*, ETranslationLengthProblemOptions)' is deprecated [-Wdeprecated-declarations] - 224 | CCdregion_translate::TranslateCdregion(data, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ - 225 | feat, - | ~~~~~ - 226 | x_Scope(), - | ~~~~~~~~~~ - 227 | include_stop, - | ~~~~~~~~~~~~~ - 228 | remove_trailingX); - | ~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/promote.cpp:52: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/objmgr/util/sequence.hpp:966:17: note: declared here - 966 | static void TranslateCdregion(string& prot, - | ^~~~~~~~~~~~~~~~~ -o apply_object.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/string_constraint.cpp -o string_constraint.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seqid_guesser.cpp -o seqid_guesser.o @@ -20600,7 +20636,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/struc_comm_field.cpp -o struc_comm_field.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_desc_field.cpp -o text_desc_field.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gb_block_field.cpp -o gb_block_field.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wn/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -s/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp: In function 'void ncbi::objects::edit::ConvertRawToDeltaByNs(ncbi::objects::CSeq_inst&, size_t, int, size_t, int, bool, int, int, int)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:1850:71: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long unsigned int'} and 'int' [-Wsign-compare] 1850 | if (n_len >= min_unknown && (max_unknown < 0 || n_len <= max_unknown)) { | ~~~~~~^~~~~~~~~~~~~~ @@ -20628,13 +20670,7 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/seq_entry_edit.cpp:2881:39: warning: comparison of integer expressions of different signedness: 'ncbi::TSeqPos' {aka 'unsigned int'} and 'ncbi::TSignedSeqPos' {aka 'int'} [-Wsign-compare] 2881 | if (pos >= start && pos < start + len) { | ~~~~^~~~~~~~~~~~~ -o-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/link_cds_mrna.cpp -o link_cds_mrna.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp -o cds_fix.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/loc_edit.cpp -o loc_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/mail_report.cpp -o mail_report.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/feattable_edit.cpp -o feattable_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gaps_edit.cpp -o gaps_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -s/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp: In function 'bool ncbi::objects::edit::AdjustForCDSPartials(const ncbi::objects::CSeq_feat&, ncbi::objects::CSeq_entry_Handle)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/cds_fix.cpp:457:57: warning: 'bool ncbi::objects::edit::AdjustProteinMolInfoToMatchCDS(ncbi::objects::CMolInfo&, const ncbi::objects::CSeq_feat&)' is deprecated [-Wdeprecated-declarations] 457 | any_change |= AdjustProteinMolInfoToMatchCDS((*it)->SetMolinfo(), cds); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -20657,17 +20693,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbistr.hpp:5461:11: note: declared here 5461 | SIZE_TYPE NStr::Find(const CTempString str, const CTempString pattern, | ^~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] + 259 | for (int j = i + 1; j < spans.size(); j++) + | ~~^~~~~~~~~~~~~~ pecs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/source_edit.cpp -o source_edit.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp -o rna_edit.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/remote_updater.cpp -o remote_updater.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/eutils_updater.cpp -o eutils_updater.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/parse_text_options.cpp -o parse_text_options.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/publication_edit.cpp -o publication_edit.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp: In member function 'bool ncbi::objects::edit::CFindITSParser::IsLengthTooLarge(const std::string&, int, int, const std::vector&, const std::vector&, const std::vector&, int)': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/rna_edit.cpp:259:31: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] - 259 | for (int j = i + 1; j < spans.size(); j++) - | ~~^~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fs/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/text_object_description.cpp:336:15: warning: 'std::string ncbi::objects::edit::GetTextObjectDescription(const ncbi::objects::CSeq_feat&, ncbi::objects::CScope&, const std::string&)' defined but not used [-Wunused-function] 336 | static string GetTextObjectDescription(const CSeq_feat& seq_feat, CScope& scope, const string& product) | ^~~~~~~~~~~~~~~~~~~~~~~~ tack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/edit/gap_trim.cpp -o gap_trim.o @@ -20683,7 +20719,7 @@ /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -cd objtools/cleanup/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/cleanup/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=cleanup UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' @@ -20692,7 +20728,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo4193849 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup TMPL=cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo1034460 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/cleanup/autogenerated_cleanup.cpp -o autogenerated_cleanup.o @@ -20732,7 +20768,7 @@ /bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xcleanup.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -cd objtools/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null +cd objtools/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xformat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' @@ -20741,7 +20777,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -j12 --jobserver-auth=fifo:/tmp/GMfifo5676 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format TMPL=xformat -j12 --jobserver-auth=fifo:/tmp/GMfifo1057876 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/accession_item.cpp -o accession_item.o @@ -20800,17 +20836,17 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:3098:84: note: the temporary was destroyed at the end of the full expression 'ncbi::objects::CFeatureIndex::GetMappedFeat() const().ncbi::objects::CMappedFeat::GetOriginalFeature()' 3098 | const CSeq_feat& original_feat = sfx.GetMappedFeat().GetOriginalFeature(); // it->GetOriginalFeature(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] + 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) + | ^~~~~~~~~~~ -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/format_item_ostream.cpp -o format_item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/item_ostream.cpp -o item_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ostream_text_ostream.cpp -o ostream_text_ostream.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/origin_item.cpp -o origin_item.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_gather.cpp -o ftable_gather.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/ftable_formatter.cpp -o ftable_formatter.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp: At global scope: -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gather_items.cpp:969:13: warning: 'bool ncbi::objects::s_NsAreGaps(const CBioseq_Handle&, CBioseqContext&)' defined but not used [-Wunused-function] - 969 | static bool s_NsAreGaps(const CBioseq_Handle& seq, CBioseqContext& ctx) - | ^~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/genbank_formatter.cpp:285:15: warning: 'std::string ncbi::objects::s_get_anchor_html(const std::string&, ncbi::TGi)' defined but not used [-Wunused-function] 285 | static string s_get_anchor_html(const string & sAnchorName, TGi iGi ) | ^~~~~~~~~~~~~~~~~ -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/objtools/format/gbseq_formatter.cpp -o gbseq_formatter.o @@ -20833,7 +20869,7 @@ /bin/ln -f .xformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' -cd algo/blast/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ="" LIB_PROJ=xblastformat UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' @@ -20842,7 +20878,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -j12 --jobserver-auth=fifo:/tmp/GMfifo10604 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format TMPL=xblastformat -j12 --jobserver-auth=fifo:/tmp/GMfifo1082959 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blastfmtutil.cpp -o blastfmtutil.o @@ -20900,10 +20936,6 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/corelib/ncbimisc.hpp:1209:38: note: in definition of macro 'NCBI_DEPRECATED_CTOR' 1209 | # define NCBI_DEPRECATED_CTOR(decl) decl NCBI_DEPRECATED | ^~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] - 122 | if (m_ResultsMap.size() != currNum) - | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ In file included from /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_format.cpp:49: /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp: In member function 'virtual std::string ncbi::CCmdLineBlastXMLReportData::GetFilterString() const': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/format/data4xmlformat.hpp:155:38: warning: 'char* ncbi::blast::CBlastOptions::GetFilterString() const' is deprecated [-Wdeprecated-declarations] @@ -20924,6 +20956,10 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/algo/blast/api/blast_options.hpp:178:27: note: declared here 178 | NCBI_DEPRECATED char* GetFilterString() const; | ^~~~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp: In member function 'virtual void* CBlastAsyncFormatThread::Main()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/blast_async_format.cpp:122:49: warning: comparison of integer expressions of different signedness: 'std::map >::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare] + 122 | if (m_ResultsMap.size() != currNum) + | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ oducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/data4xml2format.cpp -o data4xml2format.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/build_archive.cpp -o build_archive.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/format/vecscreen_run.cpp -o vecscreen_run.o @@ -20936,134 +20972,136 @@ /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -cd algo/blast/blastinput/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/blastinput/unit_test/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastinput_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=bl2seq_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=delta_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=magicblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=psiblast_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/api/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=redoalignment_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd algo/blast/unit_tests/blast_format/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_format_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd algo/blast/unit_tests/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=bdbloader_unit_test LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_formatter LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096869 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15015 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096855 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096864 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test TMPL=blastinput_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096851 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096896 all +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15019 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -j12 --jobserver-auth=fifo:/tmp/GMfifo1096913 all make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15026 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=magicblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15024 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15032 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format TMPL=blast_format_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15043 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=blast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096861 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=delta_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15022 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=redoalignment_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096886 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -j12 --jobserver-auth=fifo:/tmp/GMfifo1096962 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=psiblast_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096870 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1096898 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api TMPL=bl2seq_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15017 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -j12 --jobserver-auth=fifo:/tmp/GMfifo1096945 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastn -j12 --jobserver-auth=fifo:/tmp/GMfifo15071 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb TMPL=bdbloader_unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo15046 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blast_formatter -j12 --jobserver-auth=fifo:/tmp/GMfifo15067 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastp -j12 --jobserver-auth=fifo:/tmp/GMfifo15076 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/seqalignfilter_unit_test.cpp -o seqalignfilter_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/blastfmtutil_unit_test.cpp -o blastfmtutil_unit_test.o @@ -21071,26 +21109,6 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blast_format/vecscreen_run_unit_test.cpp -o vecscreen_run_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_testsmake[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -j12 --jobserver-auth=fifo:/tmp/GMfifo16027 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp: In member function 'virtual int CBlastpApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp:148:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] 148 | if (total_length < max_db_size) { @@ -21131,6 +21149,42 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp:159:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] 159 | if (total_length > max_db_size) { | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/blast_unit_test.cpp -o blast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=blastx -j12 --jobserver-auth=fifo:/tmp/GMfifo1101340 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o magicblast_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -j12 --jobserver-auth=fifo:/tmp/GMfifo1102942 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I../ -DNCBI_APP_BUILT_AS=bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/blastdb/bdbloader_unit_test.cpp -o bdbloader_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bdbloader_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o bdbloader_unit_test @@ -21138,7 +21192,7 @@ /bin/ln -f bdbloader_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bdbloader_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=deltablast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -21147,7 +21201,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=deltablast -j12 --jobserver-auth=fifo:/tmp/GMfifo16748 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -j12 --jobserver-auth=fifo:/tmp/GMfifo1103229 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/delta_unit_test.cpp -o delta_unit_test.o @@ -21156,7 +21210,7 @@ /bin/ln -f delta_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/delta_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=psiblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -21165,16 +21219,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=psiblast -j12 --jobserver-auth=fifo:/tmp/GMfifo16835 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -j12 --jobserver-auth=fifo:/tmp/GMfifo1103683 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/magicblast_unit_test.cpp -o magicblast_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie magicblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o magicblast_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f magicblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/magicblast_unit_test +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o redoalignment_unit_test +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=rpsblast LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -21183,18 +21237,34 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpsblast -j12 --jobserver-auth=fifo:/tmp/GMfifo16887 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo1103816 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../core -DNCBI_APP_BUILT_AS=redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/redoalignment_unit_test.cpp -o redoalignment_unit_test.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie redoalignment_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o redoalignment_unit_test -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f redoalignment_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/redoalignment_unit_test -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=rpstblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp: In member function 'virtual int CBlastxApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:150:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 150 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:161:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 161 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -j12 --jobserver-auth=fifo:/tmp/GMfifo1103936 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/../../api -DNCBI_APP_BUILT_AS=psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/psiblast_unit_test.cpp -o psiblast_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lseqalign_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o psiblast_unit_test @@ -21202,7 +21272,14 @@ /bin/ln -f psiblast_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=seedtop LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -21211,103 +21288,55 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo1104114 all +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=rpstblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo17069 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=seedtop -j12 --jobserver-auth=fifo:/tmp/GMfifo17088 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -j12 --jobserver-auth=fifo:/tmp/GMfifo1104165 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp: In member function 'virtual int CBlastxApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:150:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 150 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp:161:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 161 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ /blast_format/blast_format_unit_test.cpp -o blast_format_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seqalignfilter_unit_test.o blastfmtutil_unit_test.o build_archive_unit_test.o vecscreen_run_unit_test.o blast_format_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_format_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blast_format_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_format_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=tblastn LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastn -j12 --jobserver-auth=fifo:/tmp/GMfifo17428 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTFORMAT -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blast_formatter.cpp -o blast_formatter.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_formatter.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blast_formatter /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blast_formatter /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_formatter make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_node.cpp -o blastp_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastp_app.cpp -o blastp_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastp_node.o blastp_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastp -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastp -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blast/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=tblastx LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdb_aliastool LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast TMPL=tblastx -j12 --jobserver-auth=fifo:/tmp/GMfifo17715 all -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -j12 --jobserver-auth=fifo:/tmp/GMfifo17721 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_node.cpp -o blastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastn_app.cpp -o blastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastn_node.o blastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lxformat -lxcleanup -lvalid -lgbseq -lmlacli -lmla -lmedlars -lpubmed -lsubmit -lxregexp -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastn -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdb_convert LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_aliastool -j12 --jobserver-auth=fifo:/tmp/GMfifo1104292 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -j12 --jobserver-auth=fifo:/tmp/GMfifo18042 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 143 | if (total_length < max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] - 154 | if (total_length > max_db_size) { - | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_convert -j12 --jobserver-auth=fifo:/tmp/GMfifo1104342 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_node.cpp -o blastx_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/blastx_app.cpp -o blastx_app.o @@ -21316,7 +21345,7 @@ /bin/ln -f blastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdb_path LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21325,35 +21354,23 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -j12 --jobserver-auth=fifo:/tmp/GMfifo18919 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdb_path -j12 --jobserver-auth=fifo:/tmp/GMfifo1105509 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp: In member function 'virtual int CTblastnApp::Run()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:143:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 143 | if (total_length < max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp:154:50: warning: comparison of integer expressions of different signedness: 'Uint8' {aka 'long unsigned int'} and 'Int8' {aka 'long int'} [-Wsign-compare] + 154 | if (total_length > max_db_size) { + | ~~~~~~~~~~~~~^~~~~~~~~~~~~ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -j12 --jobserver-auth=fifo:/tmp/GMfifo20773 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdbcheck LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21362,16 +21379,16 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -j12 --jobserver-auth=fifo:/tmp/GMfifo21521 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcheck -j12 --jobserver-auth=fifo:/tmp/GMfifo1106431 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/deltablast make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdbcmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21380,7 +21397,7 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -j12 --jobserver-auth=fifo:/tmp/GMfifo21896 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcmd -j12 --jobserver-auth=fifo:/tmp/GMfifo1106824 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpstblastn_node.cpp -o rpstblastn_node.o @@ -21389,8 +21406,19 @@ /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f rpstblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpstblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_node.cpp -o rpsblast_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/rpsblast_app.cpp -o rpsblast_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie rpsblast_node.o rpsblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o rpsblast +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f rpsblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/rpsblast +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastdbcp LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=makeblastdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -21399,44 +21427,33 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo21963 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/psiblast_app.cpp -o psiblast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie psiblast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o psiblast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f psiblast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/psiblast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=blastdbcp -j12 --jobserver-auth=fifo:/tmp/GMfifo1106924 all +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeblastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1106933 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=makeclusterdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -j12 --jobserver-auth=fifo:/tmp/GMfifo22034 all make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -j12 --jobserver-auth=fifo:/tmp/GMfifo22059 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeclusterdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1107279 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_convert.cpp -o blastdb_convert.o @@ -21445,62 +21462,62 @@ /bin/ln -f blastdb_convert /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_convert make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_formatter_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null -make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +cd app/blastdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=makeprofiledb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb TMPL=makeprofiledb -j12 --jobserver-auth=fifo:/tmp/GMfifo1107493 all make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastx_app.cpp -o tblastx_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastx_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastx -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f tblastx /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastx +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/seedtop_app.cpp -o seedtop_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie seedtop_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o seedtop +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f seedtop /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/seedtop make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_formatter_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo22125 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_blast_formatter_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blast_vdb_cmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_formatter_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_vdb_cmd -j12 --jobserver-auth=fifo:/tmp/GMfifo22156 all -make[5]: warning: -j12 forced in submake: resetting jobserver mode. -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/deltablast_app.cpp -o deltablast_app.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie deltablast_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o deltablast -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f deltablast /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/deltablast -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' -cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=blastn_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_path.cpp -o blastdb_path.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_path.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_path +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_path +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blast_vdb_cmd LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_formatter_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1107644 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_blast_formatter_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. +make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo22390 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_blastn_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. -Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lockmake[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_path.cpp -o blastdb_path.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_path.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_path -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdb_path /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_path +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blast_vdb_cmd -j12 --jobserver-auth=fifo:/tmp/GMfifo1107682 all +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdb_aliastool.cpp -o blastdb_aliastool.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdb_aliastool.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdb_aliastool +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdb_aliastool /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdb_aliastool make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo3785118 APP_PROJ=tblastn_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=blastn_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' @@ -21509,8 +21526,8 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=tblastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo22465 all -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_tblastn_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=blastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1107994 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_blastn_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp: In member function 'virtual int CBlastDBCmdApp::Run()': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:1211:13: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1211 | if (!output_prefix.empty() && (output_prefix.back() != CFile::GetPathSeparator())) @@ -21518,6 +21535,36 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp:1213:17: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1213 | CRef m = m_BlastDb->GetDBMetaData(output_prefix); | ^~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_node.cpp -o tblastn_node.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blast/tblastn_app.cpp -o tblastn_app.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie tblastn_node.o tblastn_app.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxregexp -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o tblastn +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f tblastn /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/tblastn +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' +cd app/blastvdb/ && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo817486 APP_PROJ=tblastn_vdb LIB_PROJ="" UNIX_PROJ="" sources= configurables=configurables.null +make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[4]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +make[5]: warning: -j12 forced in submake: resetting jobserver mode. +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.app.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb TMPL=tblastn_vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1108683 all +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/run_with_lock: Adjusting base from make_tblastn_vdb to make__blastvdb_common per /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/.#lock-map. +Waiting for /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock./build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] + 565 | bool success = m_DB->EndBuild(); + | ^~~~~~~ +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcheck +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcheck +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp: In member function 'void CMakeProfileDBApp::x_InitRPSDbInfo(CRPS_DbInfo&, Int4, Int4)': /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:768:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 768 | if (!rpsDbInfo.aux_file.is_open()) @@ -21529,62 +21576,44 @@ /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp:1392:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector >::size_type' {aka 'long unsigned int'} [-Wsign-compare] 1392 | if (m_NumOfVols == m_VolNames.size()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp: In member function 'void CMakeClusterDBApp::x_BuildDatabase()': -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp:565:10: warning: unused variable 'success' [-Wunused-variable] - 565 | bool success = m_DB->EndBuild(); - | ^~~~~~~ -..make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcp.cpp -o blastdbcp.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcp.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lwritedb -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lxconnext -lxser -lxcgi -lxhtml -lxconnect -lxutil -lxncbi -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcp /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blastdbcp /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcp make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +..make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcmd +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcmd +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLAST -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/unit_tests/api/bl2seq_unit_test.cpp -o bl2seq_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie bl2seq_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_unit_test_util -ltest_boost -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lxobjsimple -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o bl2seq_unit_test /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f bl2seq_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/bl2seq_unit_test make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcheck.cpp -o blastdbcheck.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcheck.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcheck -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdbcheck /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcheck -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/blastdbcmd.cpp -o blastdbcmd.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastdbcmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o blastdbcmd -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f blastdbcmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blastdbcmd +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp -o makeclusterdb.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeclusterdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeclusterdb +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeclusterdb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -I/include -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/internal/blast/vdb -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/blast_vdb_app_util.cpp -o blast_vdb_app_util.o +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -I/include -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/internal/blast/vdb -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/blast_formatter_vdb.cpp -o blast_formatter_vdb.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -L/../../../c++/lib -fPIE -pie blast_vdb_app_util.o blast_formatter_vdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lncbi_xloader_wgs -lncbi_xloader_csra -lvdb2blast -lsraread -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lm -lpthread -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lmbedtls -lmbedx509 -lmbedcryp.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -I/include -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/internal/blast/vdb -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=blast_vdb_cmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/blast_vdb_cmd.cpp -o blast_vdb_cmd.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blast_vdb_cmd.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lvdb2blast -lncbi_xloader_csra -lsraread -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lm -lpthread -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_vdb_cmd /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_vdb_cmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blast_vdb_cmd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_vdb_cmd make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeprofiledb -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeprofiledb -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -I/include -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/internal/blast/vdb -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/blast_vdb_app_util.cpp -o blast_vdb_app_util.o -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -I/include -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include/internal/blast/vdb -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/blast_formatter_vdb.cpp -o blast_formatter_vdb.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -L/../../../c++/lib -fPIE -pie blast_vdb_app_util.o blast_formatter_vdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lblast_app_util -lncbi_xloader_wgs -lncbi_xloader_csra -lvdb2blast -lsraread -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lm -lpthread -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lmbedtls -lmbedx509 -lmbedcryp.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeclusterdb.cpp -o makeclusterdb.o -/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeclusterdb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeclusterdb -/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin -/bin/ln -f makeclusterdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeclusterdb -make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' to -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blast_formatter_vdb /bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin /bin/ln -f blast_formatter_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/blast_formatter_vdb @@ -21598,10 +21627,17 @@ /bin/ln -f makeblastdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeblastdb make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +/usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -DNCBI_APP_BUILT_AS=makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastdb/makeprofiledb.cpp -o makeprofiledb.o +/usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie makeprofiledb.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -lwritedb -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -o makeprofiledb +/bin/bash /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/scripts/common/impl/if_diff.sh /bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin +/bin/ln -f makeprofiledb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/bin/makeprofiledb +make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' +make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' . -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock for PID 22435 (make__blastvdb_common) +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock for PID 1108086 (make__blastvdb_common) make[5]: warning: -j12 forced in submake: resetting jobserver mode. -..make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' +.make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blastinput_unit_test.cpp -o blastinput_unit_test.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -Wno-unused-local-typedefs -DNCBI_APP_BUILT_AS=blastinput_unit_test /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/algo/blast/blastinput/unit_test/blast_scope_src_unit_test.cpp -o blast_scope_src_unit_test.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,/usr/lib/ncbi-blast+ -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -gdwarf-3 -O2 -fPIE -pie blastinput_unit_test.o blast_scope_src_unit_test.o -Wl,-rpath-link,/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -L/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/lib -ltest_boost -lentrez2cli -lentrez2 -lblastinput -lncbi_xloader_blastdb_rmt -lncbi_xloader_blastdb -lxblastformat -lalign_format -ltaxon1 -lblastdb_format -lgene_info -lxformat -lxcleanup -lgbseq -lxobjedit -lefetch -leutils -legquery -lelink -lepost -lesearch -lespell -lesummary -leinfo -luilist -lehistory -lxobjread -lvariation -lsubmit -lxlogging -ltaxon3 -lmla -lmedlars -lpubmed -lvalid -lxalnmgr -lblastxml -lblastxml2 -lxcgi -lxhtml -lproteinkmer -lxblast -lblast -lutrtprof -lxalgoblastdbindex -lcomposition_adjustment -lxalgodustmask -lxalgowinmask -lseqmasks_io -lseqdb -lblast_services -lxalnmgr -lxobjutil -lxobjread -lvariation -lsubmit -lxlogging -lxnetblastcli -lxnetblast -lblastdb -lsqlitewrapp -lscoremat -ltables -lncbi_xloader_genbank -lncbi_xreader_id1 -lncbi_xreader_id2 -lncbi_xreader_cache -lpsg_client -lxconnserv -lxxconnect2 -lncbi_xreader -lxconnext -lxconnect -lid1 -lid2 -lxobjmgr -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -lxncbi -lxcompress -lsqlite3 -llmdb -lpthread -luv -lnghttp2 -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lz -lbz2 -lzstd -lm -lpthread -o blastinput_unit_test @@ -21637,7 +21673,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[4]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' . -Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock for PID 22491 (make__blastvdb_common) +Acquired /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb/make__blastvdb_common.lock for PID 1108722 (make__blastvdb_common) make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-blast+-2.16.0+ds=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIE -DNCBI_MODULE=BLASTVDB -DNDEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/inc -I/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -DNCBI_APP_BUILT_AS=tblastn_vdb /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/app/blastvdb/tblastn_vdb.cpp -o tblastn_vdb.o @@ -21660,16 +21696,16 @@ cd c\+\+ && /usr/bin/make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo25246 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo1123351 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo25246 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build && /usr/bin/make -j12 --jobserver-auth=fifo:/tmp/GMfifo1123351 check_r RUN_CHECK=Y; \ fi make[3]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. ====================================================================== make[4]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21677,10 +21713,10 @@ /bin/echo 'Warning: non-existent sub-project "jaeger"' Warning: non-existent sub-project "jaeger" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/corelib' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project regexp due to unmet requirements: @@ -21693,21 +21729,21 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/regexp TMPL=regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo25284 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/regexp TMPL=regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo1123473 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/regexp' -/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/xregexp' -/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25315 check_add_r || exit 5 +/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1123562 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: @@ -21720,13 +21756,13 @@ make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25324 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1123589 mark-as-disabled make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/bzip2' -/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo25315 check_add_r || exit 5 +/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo1123562 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: @@ -21739,13 +21775,13 @@ make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo25356 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo1123665 mark-as-disabled make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/zlib' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo25315 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo1123562 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/compress/api' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -21755,18 +21791,18 @@ Warning: non-existent sub-project "diff" /bin/echo 'Warning: non-existent sub-project "image"' Warning: non-existent sub-project "image" -/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/tables' -/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/sequtil' -/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/bitset' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21776,7 +21812,7 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/bitset' /bin/echo 'Warning: non-existent sub-project "qparse"' Warning: non-existent sub-project "qparse" -/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project lmdb due to unmet requirements: @@ -21796,7 +21832,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdb' -/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdbxx' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/lmdbxx' @@ -21808,22 +21844,22 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" -/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo25275 check_add_r || exit 5 +/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo1123443 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util/profile' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/util' -/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo25440 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo1123863 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/services' -/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo25440 check_add_r || exit 5 +/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo1123863 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect/ext' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21832,13 +21868,13 @@ /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/connect' -/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/cgi' -/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21846,10 +21882,10 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/html' -/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo25466 check_add_r || exit 5 +/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo1123895 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' @@ -21857,14 +21893,14 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo25466 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo1123895 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo25485 check_add_r || exit 5 +/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo1123938 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: @@ -21877,7 +21913,7 @@ make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo25505 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo1123983 mark-as-disabled make[9]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' @@ -21885,10 +21921,10 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder/msbuild' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system/project_tree_builder' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/build-system' -/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo25532 check_add_r || exit 5 +/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo1124037 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/datatool' @@ -21900,16 +21936,16 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "soap"' Warning: non-existent sub-project "soap" -/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo25532 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo1124037 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/grpc_integration' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial/grpc_integration' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/serial' -/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo25598 check_add_r || exit 5 +/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo1124160 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db/sqlite' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -21919,10 +21955,10 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/db' /bin/echo 'Warning: non-existent sub-project "dbapi"' Warning: non-existent sub-project "dbapi" -/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21930,27 +21966,27 @@ /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/general' -/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biblio' -/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medline' -/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pub' -/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqcode' -/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -21958,215 +21994,215 @@ /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seq' -/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqset' -/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/submit' -/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqedit' -/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqsplit' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id1' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/id2' -/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrez2' -/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pubmed' -/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/medlars' -/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mla' -/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/proj' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/proj' -/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/scoremat' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blast' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastdb' -/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml' -/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/blastxml2' -/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mmdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mmdb' -/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cn3d' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cn3d' -/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cdd' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/cdd' -/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/ncbimime' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcsubstance' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcsubstance' -/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay' -/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/pcassay2' -/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbseq' -/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/insdseq' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/insdseq' -/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/tinyseq' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/tinyseq' -/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biotree' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/biotree' -/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrezgene' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/entrezgene' -/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/omssa' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/omssa' -/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/remap' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/remap' -/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqtest' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/seqtest' -/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon1' -/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/taxon3' -/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbproj' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/gbproj' -/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/trackmgr' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/trackmgr' -/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valerr' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valerr' -/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/valid' -/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/access' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/access' -/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/docsum' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/docsum' -/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/featdef' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/featdef' -/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo25805 check_add_r || exit 5 +/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo1124601 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' @@ -22175,69 +22211,69 @@ TEST -- objects/genomecoll/gc_cli/gc_cli make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll/gc_cli' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genomecoll' -/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/homologene' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/homologene' -/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mim' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/mim' -/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/objprt' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/objprt' -/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation' -/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/macro' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/macro' -/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genesbyloc' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/genesbyloc' -/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/coords' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/coords' -/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/varrep' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/varrep' -/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo25916 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo1124843 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo25920 check_add_r || exit 5 +/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo1124850 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/search_by_rsid' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo25920 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo1124850 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/tooltip_service' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs/dbsnp' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/variation_libs' -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo25608 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo1124178 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo25932 check_add_r || exit 5 +/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo1124898 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp/primary_track' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -22245,34 +22281,34 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp/primary_track' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objects' -/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo25941 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo1124920 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/util' -/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo25941 check_add_r || exit 5 +/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo1124920 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr/split' make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objmgr' -/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "app"' @@ -22282,13 +22318,13 @@ /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/readers' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo25971 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo1124976 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo25975 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo1124985 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' @@ -22300,7 +22336,7 @@ make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' TEST -- objtools/blast/seqdb_reader/demo/tax4blast make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo25975 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1124985 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' @@ -22309,10 +22345,10 @@ TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo25971 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo1124976 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo26183 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1125467 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' @@ -22325,10 +22361,10 @@ TEST -- objtools/blast/seqdb_writer/unit_test/writedb_lmdb_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo25971 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo1124976 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo26277 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo1125652 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' @@ -22336,7 +22372,7 @@ make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo26277 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1125652 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader/unit_test' @@ -22347,10 +22383,10 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo25971 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo1124976 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo26344 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1125791 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' @@ -22359,10 +22395,10 @@ SKIP -- objtools/blast/services/unit_test/blast_services_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo25971 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo1124976 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo26363 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1125833 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast/blastdb_format/unit_test' @@ -22374,15 +22410,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "cassandra"' Warning: non-existent sub-project "cassandra" -/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo26415 check_add_r || exit 5 +/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo1125963 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo26420 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1125972 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway/client/test' @@ -22398,32 +22434,32 @@ /bin/echo 'Warning: non-existent sub-project "ipg"' Warning: non-existent sub-project "ipg" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo26474 check_add_r || exit 5 +/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo1126113 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo26478 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo1126120 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/cache' /bin/echo 'Warning: non-existent sub-project "pubseq"' Warning: non-existent sub-project "pubseq" -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo26478 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo1126120 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo26478 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo1126120 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/id1' /bin/echo 'Warning: non-existent sub-project "pubseq2"' Warning: non-existent sub-project "pubseq2" -/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo26478 check_add_r || exit 5 +/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo1126120 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank/gicache' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Nothing to be done for 'check_add_r'. @@ -22433,7 +22469,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo26474 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1126113 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders/blastdb' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' @@ -22446,12 +22482,12 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/data_loaders' -/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/simple' -/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/alnmgr' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' @@ -22465,69 +22501,69 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/egquery' -/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/elink' -/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/epost' -/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esearch' -/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/espell' -/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/esummary' /bin/echo 'Warning: non-existent sub-project "linkout"' Warning: non-existent sub-project "linkout" -/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/efetch' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo26523 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo1126274 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils/api' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/eutils' -/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' @@ -22539,13 +22575,13 @@ /bin/echo 'Warning: non-existent sub-project "test_remote_updater"' Warning: non-existent sub-project "test_remote_updater" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/edit' -/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/cleanup' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -22559,16 +22595,16 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo25955 check_add_r || exit 5 +/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo1124941 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo26602 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1126495 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools/align_format/unit_test' @@ -22592,32 +22628,32 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo26660 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo1126632 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo26664 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo1126637 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/sra' -/usr/bin/make -C bam -j12 --jobserver-auth=fifo:/tmp/GMfifo26664 check_add_r || exit 5 +/usr/bin/make -C bam -j12 --jobserver-auth=fifo:/tmp/GMfifo1126637 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers/bam' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/readers' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo26660 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo1126632 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo26682 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1126668 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra/test' @@ -22626,10 +22662,10 @@ TEST -- sra/data_loaders/sra/test/test_sra_loader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/sra' -/usr/bin/make -C bam -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C bam -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo26733 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1126854 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam/test' @@ -22638,10 +22674,10 @@ TEST -- sra/data_loaders/bam/test/test_bam_loader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/bam' -/usr/bin/make -C csra -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C csra -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo26789 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1126930 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra/test' @@ -22658,16 +22694,16 @@ SKIP -- sra/data_loaders/csra/test/test_sra make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/csra' -/usr/bin/make -C wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C wgs -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/wgs' -/usr/bin/make -C vdbgraph -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C vdbgraph -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo26917 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1127094 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph/test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph/test' @@ -22676,7 +22712,7 @@ TEST -- sra/data_loaders/vdbgraph/test/test_vdbgraph_loader make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph/test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/vdbgraph' -/usr/bin/make -C snp -j12 --jobserver-auth=fifo:/tmp/GMfifo26678 check_add_r || exit 5 +/usr/bin/make -C snp -j12 --jobserver-auth=fifo:/tmp/GMfifo1126655 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra/data_loaders/snp' make[7]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -22686,38 +22722,38 @@ /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/sra' -/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo26974 check_add_r || exit 5 +/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo1127155 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/dustmask' -/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo26974 check_add_r || exit 5 +/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo1127155 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/winmask' /bin/echo 'Warning: non-existent sub-project "sequence"' Warning: non-existent sub-project "sequence" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo26974 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo1127155 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/core' -/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo26999 check_add_r || exit 5 +/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo1127184 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex/makeindex' @@ -22728,15 +22764,15 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/api' -/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo27023 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1127213 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' @@ -22745,15 +22781,15 @@ TEST -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/proteinkmer' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/format' -/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo27086 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo1127282 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput/unit_test' @@ -22766,22 +22802,22 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/blastinput' /bin/echo 'Warning: non-existent sub-project "blast_sra_input"' Warning: non-existent sub-project "blast_sra_input" -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/igblast' /bin/echo 'Warning: non-existent sub-project "gumbel_params"' Warning: non-existent sub-project "gumbel_params" -/usr/bin/make -C vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C vdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/vdb' -/usr/bin/make -C unit_tests -j12 --jobserver-auth=fifo:/tmp/GMfifo26987 check_add_r || exit 5 +/usr/bin/make -C unit_tests -j12 --jobserver-auth=fifo:/tmp/GMfifo1127168 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' make[7]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C blast_format -j12 --jobserver-auth=fifo:/tmp/GMfifo27148 check_add_r || exit 5 +/usr/bin/make -C blast_format -j12 --jobserver-auth=fifo:/tmp/GMfifo1127354 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' @@ -22789,7 +22825,7 @@ make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' TEST -- algo/blast/unit_tests/blast_format/blast_format_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blast_format' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo27148 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1127354 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' @@ -22797,7 +22833,7 @@ make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' TEST -- algo/blast/unit_tests/blastdb/bdbloader_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/blastdb' -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo27148 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo1127354 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' @@ -22813,7 +22849,7 @@ make[9]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' TEST -- algo/blast/unit_tests/seqdb_reader/seqdb_tax4blast_unit_test make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/seqdb_reader' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo27148 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo1127354 check_add_r || exit 5 make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[9]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' @@ -23015,7 +23051,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api' make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests' make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast' -/usr/bin/make -C segmask -j12 --jobserver-auth=fifo:/tmp/GMfifo26974 check_add_r || exit 5 +/usr/bin/make -C segmask -j12 --jobserver-auth=fifo:/tmp/GMfifo1127155 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/segmask' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -23043,15 +23079,15 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo' -/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo29505 check_add_r || exit 5 +/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo1130799 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party' -/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo29505 check_add_r || exit 5 +/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo1130799 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/third_party_static' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: @@ -23079,10 +23115,10 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo29505 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo1130799 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo29531 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo1130828 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc/jsonwrapp/test' @@ -23104,7 +23140,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo25265 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo1123411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' @@ -23121,7 +23157,7 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blast' @@ -23185,7 +23221,7 @@ Warning: non-existent sub-project "netstorage" /bin/echo 'Warning: non-existent sub-project "igblast"' Warning: non-existent sub-project "igblast" -/usr/bin/make -C winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C winmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' @@ -23193,7 +23229,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' SKIP -- app/winmasker/winmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/winmasker' -/usr/bin/make -C dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C dustmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' @@ -23201,7 +23237,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' SKIP -- app/dustmasker/dustmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/dustmasker' -/usr/bin/make -C segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C segmasker -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' @@ -23209,7 +23245,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' SKIP -- app/segmasker/segmasker make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/segmasker' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' @@ -23253,7 +23289,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' SKIP -- app/blastdb/makeclusterdb make[6]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastdb' -/usr/bin/make -C blastvdb -j12 --jobserver-auth=fifo:/tmp/GMfifo29588 check_add_r || exit 5 +/usr/bin/make -C blastvdb -j12 --jobserver-auth=fifo:/tmp/GMfifo1130890 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/app/blastvdb' @@ -23371,8 +23407,8 @@ Testing, please wait... -/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: 331: ulimit: error setting limit (Operation not permitted) -OK -- [serial/datatool] datatool.sh (real 0.66, user 0.35, sys 0.16) +/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/check.sh: line 331: ulimit: core file size: cannot modify limit: Operation not permitted +OK -- [serial/datatool] datatool.sh (real 0.82, user 0.27, sys 0.11) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM ABS -- [objects/genomecoll/gc_cli] test_gencoll_svc_ASSM_BY_SEQ @@ -23391,7 +23427,7 @@ DIS -- [objtools/blast/seqdb_reader/test] get_blastdb_metadata DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_unit_test DIS -- [objtools/blast/seqdb_writer/unit_test] writedb_lmdb_unit_test -OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.06, user 0.02, sys 0.02) +OK -- [objtools/blast/gene_info_reader/unit_test] gene_info_unit_test (real 0.09, user 0.01, sys 0.02) DIS -- [objtools/blast/blastdb_format/unit_test] blastdb_format_unit_test ABS -- [objtools/pubseq_gateway/client/test] test_psg_client_impl DIS -- [objtools/align_format/unit_test] align_format_unit_test @@ -23401,13 +23437,13 @@ ABS -- [sra/data_loaders/csra/test] test_csra_loader_mt ABS -- [sra/data_loaders/csra/test] test_csra_loader_mt_ref ABS -- [sra/data_loaders/vdbgraph/test] test_vdbgraph_loader -OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 4.85, user 3.32, sys 1.38) +OK -- [algo/blast/proteinkmer/unit_test] proteinkmer_unit_test (real 5.59, user 3.31, sys 1.61) DIS -- [algo/blast/blastinput/unit_test] blastinput_unit_test DIS -- [algo/blast/unit_tests/blast_format] blast_format_unit_test DIS -- [algo/blast/unit_tests/blastdb] bdbloader_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_unit_test DIS -- [algo/blast/unit_tests/seqdb_reader] seqdb_lmdb_unit_test -OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.10, user 0.06, sys 0.01) +OK -- [algo/blast/unit_tests/seqdb_reader] seqdb_tax4blast_unit_test (real 0.15, user 0.04, sys 0.01) DIS -- [algo/blast/unit_tests/api] blast_unit_test DIS -- [algo/blast/unit_tests/api] aalookup_unit_test DIS -- [algo/blast/unit_tests/api] seqsrc_unit_test @@ -23422,7 +23458,7 @@ DIS -- [algo/blast/unit_tests/api] pssmenginefreqratios_unit_test DIS -- [algo/blast/unit_tests/api] blastsetup_unit_test DIS -- [algo/blast/unit_tests/api] blastextend_unit_test -OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.06, user 0.05, sys 0.01) +OK -- [algo/blast/unit_tests/api] blastdiag_unit_test (real 0.06, user 0.03, sys 0.01) DIS -- [algo/blast/unit_tests/api] pssmcreate_unit_test DIS -- [algo/blast/unit_tests/api] psiblast_iteration_unit_test DIS -- [algo/blast/unit_tests/api] hspfilter_besthit_unit_test @@ -23446,7 +23482,7 @@ DIS -- [algo/blast/unit_tests/api] subj_ranges_unit_test DIS -- [algo/blast/unit_tests/api] version_reference_unit_test DIS -- [algo/blast/unit_tests/api] ntscan_unit_test -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.18, user 0.18, sys 0.11) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.61, user 0.15, sys 0.10) DIS -- [algo/blast/unit_tests/api] remote_blast_unit_test DIS -- [algo/blast/unit_tests/api] uniform_search_unit_test DIS -- [algo/blast/unit_tests/api] blastfilter_unit_test @@ -23471,120 +23507,120 @@ make[2]: Leaving directory '/build/reproducible-path/ncbi-blast+-2.16.0+ds/c++' c++/BUILD/build/check.sh concat_err cat c++/BUILD/build/check.sh.out_err -TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.18, user 0.18, sys 0.11) +TO -- [algo/blast/unit_tests/api] aascan_unit_test (real 200.61, user 0.15, sys 0.10) ====================================================================== aascan_unit_test ====================================================================== -35479/000/0000/PB EE388A97885CBD61 0001/0001 2025-07-27T06:48:54.119910 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test -35479/000/0000/PB EE388A97885CBD61 0002/0002 2025-07-27T06:48:54.120168 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder1&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=May++4+2025+03:42:51&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=May++4+2025+03:42:51&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1142848/000/0000/PB AF287040A92E3891 0001/0001 2026-08-29T13:50:01.858468 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test start /build/reproducible-path/ncbi-blast+-2.16.0+ds/c++/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test +1142848/000/0000/PB AF287040A92E3891 0002/0002 2026-08-29T13:50:01.858663 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_app_username=pbuilder2&ncbi_app_path=/build/reproducible-path/ncbi-blast%2B-2.16.0%2Bds/c%2B%2B/BUILD/build/algo/blast/unit_tests/api/aascan_unit_test&ncbi_app_build_date=May++4+2025+03:42:51&ncbi_app_package_name=blast&ncbi_app_package_version=2.16.0&ncbi_app_package_date=May++4+2025+03:42:51&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 Running 7 test cases... -35479/000/0001/RB EE388A97885CBD61 0003/0003 2025-07-27T06:48:54.122571 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -35479/000/0001/R EE388A97885CBD61 0004/0004 2025-07-27T06:48:54.124970 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=EE388A97885CBD610000000000010001 -35479/000/0001/R EE388A97885CBD61 0005/0005 2025-07-27T06:48:54.125216 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -35479/000/0001/R EE388A97885CBD61 0006/0006 2025-07-27T06:48:54.134906 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=2 -35479/000/0001/R EE388A97885CBD61 0007/0007 2025-07-27T06:48:54.137621 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0008/0008 2025-07-27T06:48:54.138036 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0009/0009 2025-07-27T06:48:54.138249 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0010/0010 2025-07-27T06:48:54.138457 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0011/0011 2025-07-27T06:48:54.138850 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0012/0012 2025-07-27T06:48:54.140532 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=3 -35479/000/0001/R EE388A97885CBD61 0013/0013 2025-07-27T06:48:54.140891 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=4 -35479/000/0001/R EE388A97885CBD61 0014/0014 2025-07-27T06:48:54.141047 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0015/0015 2025-07-27T06:48:54.141065 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0016/0016 2025-07-27T06:48:54.141089 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0017/0017 2025-07-27T06:48:54.141104 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0018/0018 2025-07-27T06:48:54.141116 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0019/0019 2025-07-27T06:48:54.141221 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=5 -35479/000/0001/R EE388A97885CBD61 0020/0020 2025-07-27T06:48:55.142022 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=6 -35479/000/0001/R EE388A97885CBD61 0021/0021 2025-07-27T06:48:55.142261 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0022/0022 2025-07-27T06:48:55.142293 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0023/0023 2025-07-27T06:48:55.142318 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0024/0024 2025-07-27T06:48:55.142341 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0025/0025 2025-07-27T06:48:55.142362 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0026/0026 2025-07-27T06:48:55.142560 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=7 -35479/000/0001/R EE388A97885CBD61 0027/0027 2025-07-27T06:48:57.644638 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=8 -35479/000/0001/R EE388A97885CBD61 0028/0028 2025-07-27T06:48:57.644819 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0029/0029 2025-07-27T06:48:57.644836 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0030/0030 2025-07-27T06:48:57.644855 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0031/0031 2025-07-27T06:48:57.644869 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0032/0032 2025-07-27T06:48:57.644881 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0033/0033 2025-07-27T06:48:57.645013 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=9 -35479/000/0001/R EE388A97885CBD61 0034/0034 2025-07-27T06:49:02.395940 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=10 -35479/000/0001/R EE388A97885CBD61 0035/0035 2025-07-27T06:49:02.396608 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0036/0036 2025-07-27T06:49:02.396641 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0037/0037 2025-07-27T06:49:02.396668 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0038/0038 2025-07-27T06:49:02.396692 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0039/0039 2025-07-27T06:49:02.396716 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0040/0040 2025-07-27T06:49:02.399485 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=11 -35479/000/0001/R EE388A97885CBD61 0041/0041 2025-07-27T06:49:10.525251 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=12 -35479/000/0001/R EE388A97885CBD61 0042/0042 2025-07-27T06:49:10.525510 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0043/0043 2025-07-27T06:49:10.525543 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0044/0044 2025-07-27T06:49:10.525577 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0045/0045 2025-07-27T06:49:10.525604 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0046/0046 2025-07-27T06:49:10.525627 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0047/0047 2025-07-27T06:49:10.525865 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=13 -35479/000/0001/R EE388A97885CBD61 0048/0048 2025-07-27T06:49:23.714155 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=14 -35479/000/0001/R EE388A97885CBD61 0049/0049 2025-07-27T06:49:23.714415 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0050/0050 2025-07-27T06:49:23.714448 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0051/0051 2025-07-27T06:49:23.714474 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0052/0052 2025-07-27T06:49:23.714498 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0053/0053 2025-07-27T06:49:23.714520 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0054/0054 2025-07-27T06:49:23.714762 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=15 -35479/000/0001/R EE388A97885CBD61 0055/0055 2025-07-27T06:49:44.496788 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=16 -35479/000/0001/R EE388A97885CBD61 0056/0056 2025-07-27T06:49:44.497045 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0057/0057 2025-07-27T06:49:44.497078 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0058/0058 2025-07-27T06:49:44.497105 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0059/0059 2025-07-27T06:49:44.497139 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0060/0060 2025-07-27T06:49:44.497164 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0061/0061 2025-07-27T06:49:44.497406 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=17 -35479/000/0001/R EE388A97885CBD61 0062/0062 2025-07-27T06:50:14.498255 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=18 -35479/000/0001/R EE388A97885CBD61 0063/0063 2025-07-27T06:50:14.498566 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0064/0064 2025-07-27T06:50:14.498620 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0065/0065 2025-07-27T06:50:14.498662 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0066/0066 2025-07-27T06:50:14.498697 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0067/0067 2025-07-27T06:50:14.498732 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/R EE388A97885CBD61 0068/0068 2025-07-27T06:50:14.499065 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=19 -35479/000/0001/R EE388A97885CBD61 0069/0069 2025-07-27T06:50:44.499940 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test extra issued_subhit=20 -35479/000/0001/R EE388A97885CBD61 0070/0070 2025-07-27T06:50:44.500217 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0001/R EE388A97885CBD61 0071/0071 2025-07-27T06:50:44.500253 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0001/R EE388A97885CBD61 0072/0072 2025-07-27T06:50:44.500282 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0001/R EE388A97885CBD61 0073/0073 2025-07-27T06:50:44.500316 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0001/R EE388A97885CBD61 0074/0074 2025-07-27T06:50:44.500341 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0001/RE EE388A97885CBD61 0075/0075 2025-07-27T06:50:44.508106 codethink04-arm64 UNK_CLIENT EE388A97885CBD61_0001SID aascan_unit_test request-stop 500 110.385515928 0 0 +1142848/000/0001/RB AF287040A92E3891 0003/0003 2026-08-29T13:50:01.860335 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanOffsetTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1142848/000/0001/R AF287040A92E3891 0004/0004 2026-08-29T13:50:01.900952 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF287040A92E38910000000000010001 +1142848/000/0001/R AF287040A92E3891 0005/0005 2026-08-29T13:50:01.901599 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +1142848/000/0001/R AF287040A92E3891 0006/0006 2026-08-29T13:50:02.007458 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=2 +1142848/000/0001/R AF287040A92E3891 0007/0007 2026-08-29T13:50:02.024102 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#1000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0008/0008 2026-08-29T13:50:02.027317 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0009/0009 2026-08-29T13:50:02.028918 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0010/0010 2026-08-29T13:50:02.032650 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0011/0011 2026-08-29T13:50:02.037145 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0012/0012 2026-08-29T13:50:02.071903 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=3 +1142848/000/0001/R AF287040A92E3891 0013/0013 2026-08-29T13:50:02.072216 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=4 +1142848/000/0001/R AF287040A92E3891 0014/0014 2026-08-29T13:50:02.072359 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#2000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0015/0015 2026-08-29T13:50:02.072375 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0016/0016 2026-08-29T13:50:02.072394 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0017/0017 2026-08-29T13:50:02.072405 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0018/0018 2026-08-29T13:50:02.072415 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0019/0019 2026-08-29T13:50:02.072511 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=5 +1142848/000/0001/R AF287040A92E3891 0020/0020 2026-08-29T13:50:03.072869 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=6 +1142848/000/0001/R AF287040A92E3891 0021/0021 2026-08-29T13:50:03.073038 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#3000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0022/0022 2026-08-29T13:50:03.073053 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0023/0023 2026-08-29T13:50:03.073064 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0024/0024 2026-08-29T13:50:03.073073 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0025/0025 2026-08-29T13:50:03.073082 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0026/0026 2026-08-29T13:50:03.073197 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=7 +1142848/000/0001/R AF287040A92E3891 0027/0027 2026-08-29T13:50:05.575913 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=8 +1142848/000/0001/R AF287040A92E3891 0028/0028 2026-08-29T13:50:05.576070 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#4000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0029/0029 2026-08-29T13:50:05.576085 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0030/0030 2026-08-29T13:50:05.576103 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0031/0031 2026-08-29T13:50:05.576114 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0032/0032 2026-08-29T13:50:05.576140 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0033/0033 2026-08-29T13:50:05.576260 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=9 +1142848/000/0001/R AF287040A92E3891 0034/0034 2026-08-29T13:50:10.327908 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=10 +1142848/000/0001/R AF287040A92E3891 0035/0035 2026-08-29T13:50:10.328061 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#5000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0036/0036 2026-08-29T13:50:10.328075 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0037/0037 2026-08-29T13:50:10.328099 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0038/0038 2026-08-29T13:50:10.328111 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0039/0039 2026-08-29T13:50:10.328121 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0040/0040 2026-08-29T13:50:10.399651 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=11 +1142848/000/0001/R AF287040A92E3891 0041/0041 2026-08-29T13:50:18.527922 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=12 +1142848/000/0001/R AF287040A92E3891 0042/0042 2026-08-29T13:50:18.528104 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#6000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0043/0043 2026-08-29T13:50:18.528125 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0044/0044 2026-08-29T13:50:18.528139 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0045/0045 2026-08-29T13:50:18.528149 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0046/0046 2026-08-29T13:50:18.528158 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0047/0047 2026-08-29T13:50:18.531137 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=13 +1142848/000/0001/R AF287040A92E3891 0048/0048 2026-08-29T13:50:31.719087 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=14 +1142848/000/0001/R AF287040A92E3891 0049/0049 2026-08-29T13:50:31.719243 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#7000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0050/0050 2026-08-29T13:50:31.719258 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0051/0051 2026-08-29T13:50:31.719269 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0052/0052 2026-08-29T13:50:31.719278 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0053/0053 2026-08-29T13:50:31.719288 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0054/0054 2026-08-29T13:50:31.719414 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=15 +1142848/000/0001/R AF287040A92E3891 0055/0055 2026-08-29T13:50:52.503947 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=16 +1142848/000/0001/R AF287040A92E3891 0056/0056 2026-08-29T13:50:52.504103 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#8000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0057/0057 2026-08-29T13:50:52.504125 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0058/0058 2026-08-29T13:50:52.504138 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0059/0059 2026-08-29T13:50:52.504148 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0060/0060 2026-08-29T13:50:52.504158 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0061/0061 2026-08-29T13:50:52.504287 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=17 +1142848/000/0001/R AF287040A92E3891 0062/0062 2026-08-29T13:51:22.505057 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=18 +1142848/000/0001/R AF287040A92E3891 0063/0063 2026-08-29T13:51:22.505718 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#9000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0064/0064 2026-08-29T13:51:22.505754 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0065/0065 2026-08-29T13:51:22.505783 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0066/0066 2026-08-29T13:51:22.505808 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0067/0067 2026-08-29T13:51:22.505831 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/R AF287040A92E3891 0068/0068 2026-08-29T13:51:22.506080 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=19 +1142848/000/0001/R AF287040A92E3891 0069/0069 2026-08-29T13:51:52.506900 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test extra issued_subhit=20 +1142848/000/0001/R AF287040A92E3891 0070/0070 2026-08-29T13:51:52.507180 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#10000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0001/R AF287040A92E3891 0071/0071 2026-08-29T13:51:52.507229 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0001/R AF287040A92E3891 0072/0072 2026-08-29T13:51:52.507259 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0001/R AF287040A92E3891 0073/0073 2026-08-29T13:51:52.507284 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0001/R AF287040A92E3891 0074/0074 2026-08-29T13:51:52.507308 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0001/RE AF287040A92E3891 0075/0075 2026-08-29T13:51:52.516389 i-capture-the-hostname UNK_CLIENT AF287040A92E38A1_0001SID aascan_unit_test request-stop 500 110.656034946 0 0 unknown location(0): fatal error: in "aascan/ScanOffsetTest": ncbi::objects::CLoaderException: NCBI C++ Exception: Error: ID2(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp", line 253: ncbi::objects::CId2Reader::x_ConnectAtSlot() --- cannot open connection: ID2 Error: GENBANK(CLoaderException::eConnectionFailed) "./c++/src/objtools/data_loaders/genbank/reader_id2_base.cpp", line 1926: ncbi::objects::CId2ReaderBase::x_SendID2Packet() --- failed to send request: NULL (in GetRecords(gi|18652417)) ./c++/src/algo/blast/unit_tests/api/aascan_unit_test.cpp(251): last checkpoint: "ScanOffsetTest" fixture entry. -35479/000/0002/RB EE388A97885CBD61 0078/0078 2025-07-27T06:50:44.511843 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 -35479/000/0002/R EE388A97885CBD61 0079/0079 2025-07-27T06:50:44.511945 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=EE388A97885CBD610000000000020002 -35479/000/0002/R EE388A97885CBD61 0080/0080 2025-07-27T06:50:44.511963 codethink04-arm64 UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 -35479/000/0002/R EE388A97885CBD61 0081/0081 2025-07-27T06:51:14.512766 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test extra issued_subhit=2 -35479/000/0002/R EE388A97885CBD61 0082/0082 2025-07-27T06:51:14.513033 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0002/R EE388A97885CBD61 0083/0083 2025-07-27T06:51:14.513067 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0002/R EE388A97885CBD61 0084/0084 2025-07-27T06:51:14.513094 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0002/R EE388A97885CBD61 0085/0085 2025-07-27T06:51:14.513118 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0002/R EE388A97885CBD61 0086/0086 2025-07-27T06:51:14.513142 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0002/R EE388A97885CBD61 0087/0087 2025-07-27T06:51:14.513376 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test extra issued_subhit=3 -35479/000/0002/R EE388A97885CBD61 0088/0088 2025-07-27T06:51:44.514163 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test extra issued_subhit=4 -35479/000/0002/R EE388A97885CBD61 0089/0089 2025-07-27T06:51:44.514419 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") -35479/000/0002/R EE388A97885CBD61 0090/0090 2025-07-27T06:51:44.514451 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown -35479/000/0002/R EE388A97885CBD61 0091/0091 2025-07-27T06:51:44.514478 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=codethink04-arm64(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown -35479/000/0002/R EE388A97885CBD61 0092/0092 2025-07-27T06:51:44.514502 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found -35479/000/0002/R EE388A97885CBD61 0093/0093 2025-07-27T06:51:44.514526 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown -35479/000/0002/R EE388A97885CBD61 0094/0094 2025-07-27T06:51:44.514746 codethink04-arm64 UNK_CLIENT EE388A97885CC621_0002SID aascan_unit_test extra issued_subhit=5 +1142848/000/0002/RB AF287040A92E3891 0078/0078 2026-08-29T13:51:52.519855 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test request-start test_name=ScanMaxHitsTest&ncbi_app_version=2.16.0&ncbi_app_sc_version=28 +1142848/000/0002/R AF287040A92E3891 0079/0079 2026-08-29T13:51:52.520001 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra ncbi_phid=AF287040A92E38910000000000020002 +1142848/000/0002/R AF287040A92E3891 0080/0080 2026-08-29T13:51:52.520033 i-capture-the-hostname UNK_CLIENT UNK_SESSION aascan_unit_test extra issued_subhit=1 +1142848/000/0002/R AF287040A92E3891 0081/0081 2026-08-29T13:52:22.520847 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test extra issued_subhit=2 +1142848/000/0002/R AF287040A92E3891 0082/0082 2026-08-29T13:52:22.521115 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#11000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0002/R AF287040A92E3891 0083/0083 2026-08-29T13:52:22.521149 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0002/R AF287040A92E3891 0084/0084 2026-08-29T13:52:22.521176 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0002/R AF287040A92E3891 0085/0085 2026-08-29T13:52:22.521212 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0002/R AF287040A92E3891 0086/0086 2026-08-29T13:52:22.521238 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0002/R AF287040A92E3891 0087/0087 2026-08-29T13:52:22.521463 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test extra issued_subhit=3 +1142848/000/0002/R AF287040A92E3891 0088/0088 2026-08-29T13:52:52.522040 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test extra issued_subhit=4 +1142848/000/0002/R AF287040A92E3891 0089/0089 2026-08-29T13:52:52.522229 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(302.22) "ncbi_socket.c", line 4375: UNK_FUNC --- SSOCK#12000[?]@:443: [SOCK::Connect] Failed SOCK_gethostbyname("www.ncbi.nlm.nih.gov") +1142848/000/0002/R AF287040A92E3891 0090/0090 2026-08-29T13:52:52.522250 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(303.7) "ncbi_connutil.c", line 2535: UNK_FUNC --- [URL_Connect; https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu] Failed to connect: Unknown +1142848/000/0002/R AF287040A92E3891 0091/0091 2026-08-29T13:52:52.522268 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(304.5) "ncbi_dispd.c", line 209: UNK_FUNC --- [ID2] Unable to create connection to network dispatcher at "https://www.ncbi.nlm.nih.gov/Service/dispd.cgi?service=ID2&address=i-capture-the-hostname(127.0.1.1)&platform=aarch64-unknown-linux-gnu": Unknown +1142848/000/0002/R AF287040A92E3891 0092/0092 2026-08-29T13:52:52.522284 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(308.5) "ncbi_service_connector.c", line 105: UNK_FUNC --- [ID2] Service not found +1142848/000/0002/R AF287040A92E3891 0093/0093 2026-08-29T13:52:52.522299 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test Error: CONNECT(315.2) "ncbi_conn_streambuf.cpp", line 132: ncbi::CConn_Streambuf::CConn_Streambuf() --- [CConn_Streambuf::CConn_Streambuf()] NULL connector: Unknown +1142848/000/0002/R AF287040A92E3891 0094/0094 2026-08-29T13:52:52.522457 i-capture-the-hostname UNK_CLIENT AF287040A92E4161_0002SID aascan_unit_test extra issued_subhit=5 Maximum execution time of 200 second(s) is exceeded -real 200.18 -user 0.18 -sys 0.11 -Start time : 07/27/2025 06:48:54 -Stop time : 07/27/2025 06:52:14 -Load averages: 1.71 11.68 33.52 +real 200.61 +user 0.15 +sys 0.10 +Start time : 08/29/2026 13:50:01 +Stop time : 08/29/2026 13:53:22 +Load averages: 6.76 17.52 23.10 @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ @@@ EXIT CODE: 143 @@ -23763,9 +23799,9 @@ dh_gencontrol -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_md5sums -O--sourcedirectory=c\+\+ -O--with-autoreconf dh_builddeb -O--sourcedirectory=c\+\+ -O--with-autoreconf +dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-7_arm64.deb'. dpkg-deb: building package 'ncbi-blast+-legacy' in '../ncbi-blast+-legacy_2.16.0+ds-7_all.deb'. dpkg-deb: building package 'ncbi-blast+-dbgsym' in '../ncbi-blast+-dbgsym_2.16.0+ds-7_arm64.deb'. -dpkg-deb: building package 'ncbi-blast+' in '../ncbi-blast+_2.16.0+ds-7_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-blast+_2.16.0+ds-7_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-blast+_2.16.0+ds-7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -23774,12 +23810,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/617269/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3561784 and its subdirectories -I: Current time: Sat Jul 26 18:55:34 -12 2025 -I: pbuilder-time-stamp: 1753599334 +I: removing directory /srv/workspace/pbuilder/617269 and its subdirectories +I: Current time: Sun Aug 30 03:59:41 +14 2026 +I: pbuilder-time-stamp: 1788011981