Diff of the two buildlogs: -- --- b1/build.log 2025-03-02 08:04:02.175710148 +0000 +++ b2/build.log 2025-03-02 08:08:31.847490846 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Mar 1 20:02:20 -12 2025 -I: pbuilder-time-stamp: 1740902540 +I: Current time: Sun Apr 5 04:27:07 +14 2026 +I: pbuilder-time-stamp: 1775312827 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying add_path_to_testscript.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/113945/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 4 14:27 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='bdb1f8dee02148dfa18cb9a9f7851d8d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='113945' - PS1='# ' - PS2='> ' + INVOCATION_ID=474ac6f4b58b42f480ce9979497a2035 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1246856 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.a4L8ewQB/pbuilderrc_nfrp --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.a4L8ewQB/b1 --logfile b1/build.log spaln_3.0.2+dfsg-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.a4L8ewQB/pbuilderrc_9YBt --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.a4L8ewQB/b2 --logfile b2/build.log spaln_3.0.2+dfsg-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/113945/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -145,7 +177,7 @@ Get: 32 http://deb.debian.org/debian trixie/main arm64 libgsl28 arm64 2.8+dfsg-5 [881 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 libgsl-dev arm64 2.8+dfsg-5 [1118 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] -Fetched 23.1 MB in 0s (146 MB/s) +Fetched 23.1 MB in 0s (63.8 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19916 files and directories currently installed.) @@ -296,7 +328,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/spaln-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../spaln_3.0.2+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/spaln-3.0.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../spaln_3.0.2+dfsg-2_source.changes dpkg-buildpackage: info: source package spaln dpkg-buildpackage: info: source version 3.0.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -347,42 +383,40 @@ make[2]: Entering directory '/build/reproducible-path/spaln-3.0.2+dfsg/src' aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c blksrc.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c aln2.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c dbs.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c gaps.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c codepot.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c divseq.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c gsinfo.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2b1.cc -aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2d1.cc -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2d1.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2h1.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2s1.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fwd2s1.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c bitpat.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c eijunc.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c seq.cc -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c simmtx.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c sqpr.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c utilseq.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c vmf.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c wln.cc -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ seq.cc: In function 'void reportseq(Seq**, int)': seq.cc:483:50: warning: format '%p' expects argument of type 'void*', but argument 9 has type 'int*' [-Wformat=] 483 | printf("%d\t%d\t%d\t%d\t%d\t%d\t%p\t%p\n", i + 1, @@ -394,6 +428,8 @@ | ~~~~~~~~ | | | int* +aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c wln.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c boyer_moore.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c clib.cc @@ -414,16 +450,16 @@ fwd2b1.o fwd2d1.o fwd2h1.o fwd2s1.o bitpat.o eijunc.o \ seq.o simmtx.o sqpr.o utilseq.o vmf.o wln.o boyer_moore.o aarch64-linux-gnu-ranlib sblib.a -aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o spaln spaln.cc blksrc.o sblib.a clib.a -lpthread -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o sortgrcd sortgrcd.cc sblib.a clib.a -lpthread -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o makdbs makdbs.cc sblib.a clib.a -lpthread -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o spaln spaln.cc blksrc.o sblib.a clib.a -lpthread -lm -lz -flto=auto -ffat-lto-objects -Wl,-z,relro -Wl,-z,now sortgrcd.cc: In function 'int count_record(const char*, const char*, size_t)': sortgrcd.cc:999:25: warning: ISO C++ forbids variable length array 'buf' [-Wvla] 999 | char buf[rcdsize]; | ^~~ +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ In function 'match_2', inlined from 'spaln_job' at spaln.cc:1142:14: spaln.cc:764:46: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] @@ -447,28 +483,28 @@ make[1]: Entering directory '/build/reproducible-path/spaln-3.0.2+dfsg/src' aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c autocomp.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c extcds.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c montseq.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c pattern.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c resite.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o exinpot exinpot.cc sblib.a clib.a -lpthread -lm -lz +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o kmers kmers.cc sblib.a clib.a -lpthread -lm -lz +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o npssm npssm.cc sblib.a clib.a -lpthread -lm -lz aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c utn.cc +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c ildpdf.cc aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c decompild.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -c fitild.cc cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-ar rc ublib.a autocomp.o extcds.o \ montseq.o pattern.o resite.o aarch64-linux-gnu-ranlib ublib.a @@ -479,11 +515,11 @@ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o fitild -DMAIN fitild.cc ildpdf.o clib.a -lpthread -lm -lz \ -L/usr/local/lib -lm -lgsl -lgslcblas aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o compild compild.cc ildpdf.o clib.a -lpthread -lm -lz -lm -lgsl -lgslcblas +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o decompild decompild.o ildpdf.o fitild.o clib.a -lpthread -lm -lz -lgsl -lgslcblas aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o plotild plotild.cc ildpdf.o clib.a -lpthread -lm -lz -lm -lgsl -lgslcblas cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ plotild.cc: In function 'getiprms': plotild.cc:136:49: warning: argument 1 value '18446744073709551615' exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=] 136 | IldPrm* ipprm = new IldPrm[nn + nprm + 1]; @@ -494,7 +530,7 @@ aarch64-linux-gnu-g++ -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/spaln-3.0.2+dfsg=. -flto=auto -ffat-lto-objects -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pedantic -Wdate-time -D_FORTIFY_SOURCE=2 -DM_THREAD=1 -o utn utn.o ublib.a sblib.a clib.a -lpthread -lm -lz please make install before test make[1]: Leaving directory '/build/reproducible-path/spaln-3.0.2+dfsg/src' - rm -fr -- /tmp/dh-xdg-rundir-1mp7pbCk + rm -fr -- /tmp/dh-xdg-rundir-dFlV7hKA create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=src dh_prep -O--sourcedirectory=src @@ -584,10 +620,10 @@ install -p -m0644 ./spaln.1 debian/spaln/usr/share/man/man1/spaln.1 man-recode --to-code UTF-8 --suffix .dh-new debian/spaln/usr/share/man/man1/sortgrcd.1 man-recode --to-code UTF-8 --suffix .dh-new debian/spaln/usr/share/man/man1/spaln.1 - mv debian/spaln/usr/share/man/man1/sortgrcd.1.dh-new debian/spaln/usr/share/man/man1/sortgrcd.1 - chmod 0644 -- debian/spaln/usr/share/man/man1/sortgrcd.1 mv debian/spaln/usr/share/man/man1/spaln.1.dh-new debian/spaln/usr/share/man/man1/spaln.1 chmod 0644 -- debian/spaln/usr/share/man/man1/spaln.1 + mv debian/spaln/usr/share/man/man1/sortgrcd.1.dh-new debian/spaln/usr/share/man/man1/sortgrcd.1 + chmod 0644 -- debian/spaln/usr/share/man/man1/sortgrcd.1 dh_installsystemduser -O--sourcedirectory=src dh_perl -O--sourcedirectory=src mv debian/spaln-data.substvars.new debian/spaln-data.substvars @@ -598,25 +634,25 @@ Normalizing debian/spaln-data/usr/share/spaln/seqdb/dictdisc.cf.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/spaln-data/usr/share/spaln/seqdb/dictdisc_g.gf.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--sourcedirectory=src - cd debian/spaln cd debian/spaln-data + cd debian/spaln chmod a-x usr/share/doc/spaln-data/changelog.Debian chmod a-x usr/share/doc/spaln/README.md usr/share/doc/spaln/changelog.Debian usr/share/man/man1/sortgrcd.1 usr/share/man/man1/spaln.1 gzip -9nf usr/share/doc/spaln-data/changelog.Debian - gzip -9nf usr/share/doc/spaln/README.md usr/share/doc/spaln/changelog.Debian usr/share/man/man1/sortgrcd.1 usr/share/man/man1/spaln.1 cd '/build/reproducible-path/spaln-3.0.2+dfsg' + gzip -9nf usr/share/doc/spaln/README.md usr/share/doc/spaln/changelog.Debian usr/share/man/man1/sortgrcd.1 usr/share/man/man1/spaln.1 cd '/build/reproducible-path/spaln-3.0.2+dfsg' dh_fixperms -O--sourcedirectory=src find debian/spaln ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/spaln-data ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/spaln/usr/share/doc -type f -a -true -a ! -regex 'debian/spaln/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/spaln-data/usr/share/doc -type f -a -true -a ! -regex 'debian/spaln-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/spaln/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 + find debian/spaln-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/spaln/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/spaln-data/usr/share/doc -type f -a -true -a ! -regex 'debian/spaln-data/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 + find debian/spaln-data -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/spaln -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 - find debian/spaln-data/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/spaln/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x - find debian/spaln-data -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 dh_missing -O--sourcedirectory=src dh_dwz -a -O--sourcedirectory=src install -m0755 -d debian/spaln/usr/lib/debug/.dwz/aarch64-linux-gnu @@ -629,16 +665,16 @@ chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/61/94db715ab7f30efe8e505c0a0f298bc23bb1c1.debug strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/spaln objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/61/94db715ab7f30efe8e505c0a0f298bc23bb1c1.debug debian/spaln/usr/bin/spaln - install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42 - objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/utn debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug - chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug - strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/utn - objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug debian/spaln/usr/bin/utn install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/sortgrcd debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4a/72066734a1e6ab5ed8db6c4d9164a36347ec64.debug chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4a/72066734a1e6ab5ed8db6c4d9164a36347ec64.debug strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/sortgrcd objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4a/72066734a1e6ab5ed8db6c4d9164a36347ec64.debug debian/spaln/usr/bin/sortgrcd + install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42 + objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/utn debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug + chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug + strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/utn + objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/42/ff0355751701f2ba417bcaec94a20521b11000.debug debian/spaln/usr/bin/utn install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/f6 objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/rdn debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/f6/0f86c0f9e1989da34c84a03214cedc15fc087b.debug chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/f6/0f86c0f9e1989da34c84a03214cedc15fc087b.debug @@ -649,31 +685,31 @@ chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/53/7f6190276dab18e7154df284c871d6ee987293.debug strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/npssm objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/53/7f6190276dab18e7154df284c871d6ee987293.debug debian/spaln/usr/bin/npssm - install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f - objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/makdbs debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug - chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug - strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/makdbs - objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug debian/spaln/usr/bin/makdbs - install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d - objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/dvn debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug - chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug - strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/dvn - objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug debian/spaln/usr/bin/dvn - install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9 - objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/exinpot debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug - chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug - strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/exinpot - objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug debian/spaln/usr/bin/exinpot install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/98 objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/kmers debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/98/e4cc8c9c1f4684231d7d16c2299c6a18b2a852.debug chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/98/e4cc8c9c1f4684231d7d16c2299c6a18b2a852.debug strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/kmers objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/98/e4cc8c9c1f4684231d7d16c2299c6a18b2a852.debug debian/spaln/usr/bin/kmers + install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f + objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/makdbs debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug + chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug + strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/makdbs + objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/4f/c59b564235078ab1b58e21c3990e38c4e1f188.debug debian/spaln/usr/bin/makdbs install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/a8 objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/plotild debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/a8/ecc256127f2f8cd3a8dac588d8f2dd9c3c5fb5.debug chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/a8/ecc256127f2f8cd3a8dac588d8f2dd9c3c5fb5.debug strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/plotild objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/a8/ecc256127f2f8cd3a8dac588d8f2dd9c3c5fb5.debug debian/spaln/usr/bin/plotild + install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9 + objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/exinpot debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug + chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug + strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/exinpot + objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/b9/bff6615daa28f001510c5756b974ab5d42b991.debug debian/spaln/usr/bin/exinpot + install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d + objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/dvn debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug + chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug + strip --remove-section=.comment --remove-section=.note debian/spaln/usr/bin/dvn + objcopy --add-gnu-debuglink debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/5d/432cb12ac1c58164cbfc612f8c94dd308b29b5.debug debian/spaln/usr/bin/dvn install -m0755 -d debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/spaln/usr/bin/makmdm debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/fe/c6918232eafe217664d1f5017ae64d0e0b3cd2.debug chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/usr/lib/debug/.build-id/fe/c6918232eafe217664d1f5017ae64d0e0b3cd2.debug @@ -705,7 +741,7 @@ rm -f debian/spaln/DEBIAN/shlibs dh_shlibdeps -a -O--sourcedirectory=src install -m0755 -d debian/spaln/DEBIAN - dpkg-shlibdeps -Tdebian/spaln.substvars debian/spaln/usr/bin/spaln debian/spaln/usr/bin/utn debian/spaln/usr/bin/sortgrcd debian/spaln/usr/bin/rdn debian/spaln/usr/bin/npssm debian/spaln/usr/bin/makdbs debian/spaln/usr/bin/dvn debian/spaln/usr/bin/exinpot debian/spaln/usr/bin/kmers debian/spaln/usr/bin/plotild debian/spaln/usr/bin/makmdm debian/spaln/usr/bin/compild debian/spaln/usr/bin/fitild debian/spaln/usr/bin/decompild + dpkg-shlibdeps -Tdebian/spaln.substvars debian/spaln/usr/bin/spaln debian/spaln/usr/bin/sortgrcd debian/spaln/usr/bin/utn debian/spaln/usr/bin/rdn debian/spaln/usr/bin/npssm debian/spaln/usr/bin/kmers debian/spaln/usr/bin/makdbs debian/spaln/usr/bin/plotild debian/spaln/usr/bin/exinpot debian/spaln/usr/bin/dvn debian/spaln/usr/bin/makmdm debian/spaln/usr/bin/compild debian/spaln/usr/bin/fitild debian/spaln/usr/bin/decompild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect @@ -730,21 +766,21 @@ chmod 0644 -- debian/spaln/DEBIAN/control dh_md5sums -O--sourcedirectory=src install -m0755 -d debian/spaln/DEBIAN - install -m0755 -d debian/spaln-data/DEBIAN cd debian/spaln >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums - cd debian/spaln-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums + install -m0755 -d debian/spaln-data/DEBIAN chmod 0644 -- debian/spaln/DEBIAN/md5sums install -m0755 -d debian/.debhelper/spaln/dbgsym-root/DEBIAN + cd debian/spaln-data >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/spaln/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/spaln/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/spaln-data/DEBIAN/md5sums dh_builddeb -O--sourcedirectory=src - dpkg-deb --root-owner-group --build debian/spaln .. dpkg-deb --root-owner-group --build debian/.debhelper/spaln/dbgsym-root .. dpkg-deb --root-owner-group --build debian/spaln-data .. -dpkg-deb: building package 'spaln' in '../spaln_3.0.2+dfsg-2_arm64.deb'. -dpkg-deb: building package 'spaln-dbgsym' in '../spaln-dbgsym_3.0.2+dfsg-2_arm64.deb'. + dpkg-deb --root-owner-group --build debian/spaln .. dpkg-deb: building package 'spaln-data' in '../spaln-data_3.0.2+dfsg-2_all.deb'. +dpkg-deb: building package 'spaln-dbgsym' in '../spaln-dbgsym_3.0.2+dfsg-2_arm64.deb'. +dpkg-deb: building package 'spaln' in '../spaln_3.0.2+dfsg-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../spaln_3.0.2+dfsg-2_arm64.buildinfo dpkg-genchanges --build=binary -O../spaln_3.0.2+dfsg-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -752,12 +788,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1246856/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/113945 and its subdirectories -I: Current time: Sat Mar 1 20:04:01 -12 2025 -I: pbuilder-time-stamp: 1740902641 +I: removing directory /srv/workspace/pbuilder/1246856 and its subdirectories +I: Current time: Sun Apr 5 04:31:30 +14 2026 +I: pbuilder-time-stamp: 1775313090