Diff of the two buildlogs: -- --- b1/build.log 2025-02-09 00:08:20.743578804 +0000 +++ b2/build.log 2025-02-09 00:09:40.739960276 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Feb 8 12:07:13 -12 2025 -I: pbuilder-time-stamp: 1739059633 +I: Current time: Sat Mar 14 20:31:28 +14 2026 +I: pbuilder-time-stamp: 1773469888 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -24,52 +24,84 @@ dpkg-source: info: applying use-archive-xopen.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/61281/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 14 06:31 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='ee98e51486ad45a09a35e2fab87de027' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='61281' - PS1='# ' - PS2='> ' + INVOCATION_ID=45e46c8c3c2245b28cb24d45ba52d58c + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3559738 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kIjCVriq/pbuilderrc_mgJO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kIjCVriq/b1 --logfile b1/build.log vcfanno_0.3.5+ds-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kIjCVriq/pbuilderrc_A1so --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kIjCVriq/b2 --logfile b2/build.log vcfanno_0.3.5+ds-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-30-cloud-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-30-cloud-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/61281/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -232,7 +264,7 @@ Get: 99 http://deb.debian.org/debian trixie/main arm64 libncurses6 arm64 6.5-2+b1 [96.1 kB] Get: 100 http://deb.debian.org/debian trixie/main arm64 samtools arm64 1.20-3+b1 [629 kB] Get: 101 http://deb.debian.org/debian trixie/main arm64 tabix arm64 1.20+ds-2 [455 kB] -Fetched 118 MB in 1s (86.0 MB/s) +Fetched 118 MB in 1s (207 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) @@ -651,7 +683,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-2_source.changes dpkg-buildpackage: info: source package vcfanno dpkg-buildpackage: info: source version 0.3.5+ds-2 dpkg-buildpackage: info: source distribution unstable @@ -675,25 +711,25 @@ dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang cd obj-aarch64-linux-gnu && go install -trimpath -v -p 12 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared +internal/goos cmp -internal/goarch internal/byteorder -internal/godebugs -internal/goos -internal/goexperiment -internal/unsafeheader -internal/coverage/rtcov +internal/goarch internal/profilerecord +internal/coverage/rtcov encoding +internal/goexperiment +internal/godebugs internal/cpu +internal/unsafeheader internal/runtime/syscall internal/itoa -internal/abi -runtime/internal/math -runtime/internal/sys internal/race math/bits +runtime/internal/math +internal/abi unicode/utf8 +runtime/internal/sys internal/chacha8rand sync/atomic unicode @@ -703,94 +739,94 @@ log/internal github.com/dsnet/compress/bzip2/internal/sais github.com/dsnet/compress/internal -math +crypto/internal/alias crypto/subtle crypto/internal/boring/sig github.com/ulikunitz/xz/internal/hash -crypto/internal/alias -internal/bytealg -internal/runtime/atomic container/list +math vendor/golang.org/x/crypto/cryptobyte/asn1 vendor/golang.org/x/crypto/internal/alias +internal/bytealg +internal/runtime/atomic internal/nettrace internal/runtime/exithook internal/stringslite runtime github.com/klauspost/compress -internal/reflectlite iter +internal/reflectlite internal/weak sync maps slices internal/bisect -internal/singleflight internal/testlog +internal/singleflight runtime/cgo errors sort internal/oserror -io strconv -vendor/golang.org/x/net/dns/dnsmessage -crypto/internal/edwards25519/field path +io +vendor/golang.org/x/net/dns/dnsmessage internal/godebug math/rand/v2 -strings -bytes -syscall +crypto/internal/edwards25519/field crypto/internal/nistec/fiat -reflect -hash +syscall +bytes container/heap -math/rand +strings +hash crypto/internal/randutil -crypto/cipher -crypto +crypto/internal/edwards25519 +math/rand +reflect +crypto/rc4 +internal/concurrent hash/crc32 +crypto hash/crc64 +crypto/md5 +crypto/cipher +unique +vendor/golang.org/x/text/transform bufio github.com/brentp/irelate/interfaces regexp/syntax github.com/dsnet/compress/internal/errors -crypto/internal/edwards25519 -crypto/md5 -crypto/rc4 +net/http/internal/ascii crypto/internal/boring crypto/des -github.com/dsnet/compress -internal/concurrent -vendor/golang.org/x/text/transform +net/netip crypto/sha256 crypto/aes crypto/sha512 crypto/hmac crypto/sha1 -unique +github.com/dsnet/compress vendor/golang.org/x/crypto/hkdf -net/http/internal/ascii -net/netip -regexp time -internal/syscall/execenv internal/syscall/unix -internal/fmtsort -encoding/binary +internal/syscall/execenv +regexp +io/fs github.com/BurntSushi/toml/internal context -io/fs internal/poll +internal/fmtsort +encoding/binary internal/filepathlite embed crypto/internal/nistec +os encoding/base64 github.com/cespare/xxhash github.com/klauspost/compress/internal/snapref -vendor/golang.org/x/crypto/chacha20 vendor/golang.org/x/crypto/internal/poly1305 -os +vendor/golang.org/x/crypto/chacha20 encoding/pem vendor/golang.org/x/crypto/chacha20poly1305 crypto/ecdh @@ -803,68 +839,68 @@ os/exec flag encoding/hex -log net/url +encoding/csv encoding/json -github.com/yuin/gopher-lua/pm +log github.com/pkg/errors github.com/yuin/gopher-lua/ast -encoding/csv github.com/dsnet/compress/internal/prefix compress/flate +github.com/yuin/gopher-lua/pm math/big github.com/klauspost/compress/fse runtime/debug github.com/ulikunitz/xz/internal/xlog -github.com/yuin/gopher-lua/parse github.com/brentp/vcfgo +github.com/yuin/gopher-lua/parse vendor/golang.org/x/text/unicode/bidi +compress/gzip +github.com/dsnet/compress/bzip2 +github.com/klauspost/compress/flate github.com/ulikunitz/xz/lzma vendor/golang.org/x/text/unicode/norm -vendor/golang.org/x/net/http2/hpack -github.com/dsnet/compress/bzip2 -compress/gzip github.com/klauspost/compress/huff0 github.com/biogo/hts/bgzf -github.com/klauspost/compress/flate -github.com/yuin/gopher-lua +vendor/golang.org/x/net/http2/hpack mime +github.com/yuin/gopher-lua vendor/golang.org/x/text/secure/bidirule -mime/quotedprintable github.com/biogo/hts/bgzf/index +mime/quotedprintable net/http/internal +os/user +github.com/BurntSushi/toml github.com/biogo/hts/csi github.com/biogo/hts/internal -os/user +vendor/golang.org/x/net/idna github.com/ulikunitz/xz github.com/biogo/hts/tabix github.com/biogo/hts/sam -github.com/BurntSushi/toml -vendor/golang.org/x/net/idna +github.com/klauspost/pgzip crypto/rand crypto/elliptic -crypto/internal/bigmod crypto/internal/boring/bbig +crypto/internal/bigmod encoding/asn1 crypto/dsa github.com/klauspost/compress/zstd crypto/ed25519 crypto/internal/hpke -github.com/biogo/hts/bam crypto/internal/mlkem768 crypto/rsa -github.com/klauspost/pgzip -github.com/brentp/irelate/parsers +github.com/biogo/hts/bam vendor/golang.org/x/crypto/cryptobyte crypto/x509/pkix -github.com/brentp/bix +github.com/brentp/irelate/parsers crypto/ecdsa +github.com/brentp/bix github.com/brentp/irelate github.com/yuin/gluare github.com/brentp/goluaez github.com/brentp/vcfanno/api -net/textproto vendor/golang.org/x/net/http/httpproxy +net/textproto crypto/x509 vendor/golang.org/x/net/http/httpguts mime/multipart @@ -890,7 +926,7 @@ === RUN TestByAlt --- PASS: TestByAlt (0.00s) PASS -ok github.com/brentp/vcfanno/api 0.034s +ok github.com/brentp/vcfanno/api 0.030s create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang dh_prep -O--buildsystem=golang @@ -1007,8 +1043,8 @@ dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined dh_md5sums -O--buildsystem=golang dh_builddeb -O--buildsystem=golang -dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-2_arm64.deb'. dpkg-deb: building package 'vcfanno-dbgsym' in '../vcfanno-dbgsym_0.3.5+ds-2_arm64.deb'. +dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-2_arm64.deb'. dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.5+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../vcfanno_0.3.5+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../vcfanno_0.3.5+ds-2_arm64.changes @@ -1017,12 +1053,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3559738/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/61281 and its subdirectories -I: Current time: Sat Feb 8 12:08:19 -12 2025 -I: pbuilder-time-stamp: 1739059699 +I: removing directory /srv/workspace/pbuilder/3559738 and its subdirectories +I: Current time: Sat Mar 14 20:32:39 +14 2026 +I: pbuilder-time-stamp: 1773469959