Diff of the two buildlogs: -- --- b1/build.log 2024-12-16 23:26:26.635967469 +0000 +++ b2/build.log 2024-12-16 23:30:08.805808620 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 16 11:21:37 -12 2024 -I: pbuilder-time-stamp: 1734391297 +I: Current time: Tue Dec 17 13:26:35 +14 2024 +I: pbuilder-time-stamp: 1734391595 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -35,52 +35,84 @@ dpkg-source: info: applying skip_tests_touching_security_sensitive_fields.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/6096/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/D01_modify_environment starting +debug: Running on virt64a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 16 23:27 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='cdfbe2fa696d4e9d9cd0a28480f6635c' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='6096' - PS1='# ' - PS2='> ' + INVOCATION_ID=01d6ab0f055e4d2eb7cb1b10939f8b81 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=14060 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tONHHTHO/pbuilderrc_M1fL --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tONHHTHO/b1 --logfile b1/build.log capsule-nextflow_1.1.1+dfsg-1.dsc' - SUDO_GID='110' - SUDO_UID='103' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.tONHHTHO/pbuilderrc_09Fn --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.tONHHTHO/b2 --logfile b2/build.log capsule-nextflow_1.1.1+dfsg-1.dsc' + SUDO_GID=114 + SUDO_UID=108 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32z 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/6096/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -298,7 +330,7 @@ Get: 166 http://deb.debian.org/debian trixie/main armhf libjacoco-java all 0.8.12-1 [647 kB] Get: 167 http://deb.debian.org/debian trixie/main armhf libjimfs-java all 1.1-6 [191 kB] Get: 168 http://deb.debian.org/debian trixie/main armhf libtruth-java all 0.39-1 [164 kB] -Fetched 222 MB in 3s (69.1 MB/s) +Fetched 222 MB in 5s (49.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19680 files and directories currently installed.) @@ -1180,7 +1212,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../capsule-nextflow_1.1.1+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../capsule-nextflow_1.1.1+dfsg-1_source.changes dpkg-buildpackage: info: source package capsule-nextflow dpkg-buildpackage: info: source version 1.1.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -1203,7 +1239,7 @@ dh_auto_build -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ - gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=3 jar + gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=4 jar openjdk version "21.0.5" 2024-10-15 OpenJDK Runtime Environment (build 21.0.5+11-Debian-1) OpenJDK Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing) @@ -1211,18 +1247,18 @@ To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' -An attempt to start the daemon took 4.93 secs. -The client will now receive all logging from the daemon (pid: 13723). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-13723.out.log +An attempt to start the daemon took 3.08 secs. +The client will now receive all logging from the daemon (pid: 19417). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-19417.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. -Using 3 worker leases. -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@11e5fa9 -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@11e5fa9 -Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@f27949 +Using 4 worker leases. +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1e6295a +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1e6295a +Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@3e8e33 Starting Build Compiling initialization script '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/init.d/init.gradle' using SubsetScriptTransformer. -Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@f9c7c7 +Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@b60345 Compiling initialization script '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/init.d/init.gradle' using BuildScriptTransformer. Compiling settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle' using SubsetScriptTransformer. Compiling settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle' using BuildScriptTransformer. @@ -1245,33 +1281,33 @@ Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'jar' from project : -Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@13a572 +Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@d35705 Tasks to be executed: [task ':capsule:compileJava', task ':capsule:processResources', task ':capsule:classes', task ':capsule:debianMavenPom', task ':capsule:jar', task ':capsule-util:compileJava', task ':capsule-util:processResources', task ':capsule-util:classes', task ':capsule-util:debianMavenPom', task ':capsule-util:jar'] -Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@f27949 -Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@796939 -Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@1dd69dc -:capsule:compileJava (Thread[#41,Task worker for ':',5,main]) started. -:capsule-util:compileJava (Thread[#29,Daemon worker,5,main]) started. +Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@3e8e33 +Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@46faf8 +Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@d83197 +:capsule:compileJava (Thread[#29,Daemon worker,5,main]) started. :capsule:compileJava +:capsule-util:compileJava (Thread[#41,Task worker for ':',5,main]) started. :capsule-util:compileJava +Putting task artifact state for task ':capsule:compileJava' into context took 0.02 secs. Putting task artifact state for task ':capsule-util:compileJava' into context took 0.02 secs. -Putting task artifact state for task ':capsule:compileJava' into context took 0.025 secs. -Up-to-date check for task ':capsule:compileJava' took 0.097 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:compileJava' took 0.043 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':capsule:compileJava'. Use of target 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. -Up-to-date check for task ':capsule-util:compileJava' took 0.77 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:compileJava' took 0.326 secs. It is not up-to-date because: No history is available. All input files are considered out-of-date for incremental task ':capsule-util:compileJava'. Use of target 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. warning: [options] source value 8 is obsolete and will be removed in a future release -warning: [options] target value 8 is obsolete and will be removed in a future release warning: [options] source value 8 is obsolete and will be removed in a future release warning: [options] target value 8 is obsolete and will be removed in a future release +warning: [options] target value 8 is obsolete and will be removed in a future release warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/src/main/java/co/paralleluniverse/common/ZipFileSystem.java:949: warning: [removal] finalize() in Object has been deprecated and marked for removal @@ -1280,75 +1316,75 @@ /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/java/Capsule.java:5712: warning: [removal] SecurityManager in java.lang has been deprecated and marked for removal final SecurityManager security = System.getSecurityManager(); ^ -Note: Some input files use or override a deprecated API. -Note: Recompile with -Xlint:deprecation for details. -Note: Some input files use unchecked or unsafe operations. /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/java/Capsule.java:5712: warning: [removal] getSecurityManager() in System has been deprecated and marked for removal final SecurityManager security = System.getSecurityManager(); ^ +Note: Some input files use or override a deprecated API. +Note: Recompile with -Xlint:deprecation for details. +Note: Some input files use unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. 4 warnings -:capsule-util:compileJava (Thread[#29,Daemon worker,5,main]) completed. Took 12.891 secs. -:capsule-util:processResources (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:compileJava (Thread[#41,Task worker for ':',5,main]) completed. Took 8.389 secs. +:capsule-util:processResources (Thread[#41,Task worker for ':',5,main]) started. :capsule-util:processResources Putting task artifact state for task ':capsule-util:processResources' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:processResources' took 0.019 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:processResources' took 0.009 secs. It is not up-to-date because: No history is available. -:capsule-util:processResources (Thread[#29,Daemon worker,5,main]) completed. Took 0.185 secs. -:capsule-util:classes (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:processResources (Thread[#41,Task worker for ':',5,main]) completed. Took 0.105 secs. +:capsule-util:classes (Thread[#41,Task worker for ':',5,main]) started. :capsule-util:classes Skipping task ':capsule-util:classes' as it has no actions. -:capsule-util:classes (Thread[#29,Daemon worker,5,main]) completed. Took 0.01 secs. -:capsule-util:debianMavenPom (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:classes (Thread[#41,Task worker for ':',5,main]) completed. Took 0.006 secs. +:capsule-util:debianMavenPom (Thread[#41,Task worker for ':',5,main]) started. :capsule-util:debianMavenPom Putting task artifact state for task ':capsule-util:debianMavenPom' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:debianMavenPom' took 0.002 secs. It is not up-to-date because: - No history is available. - Generating pom file /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/debian/capsule-util.pom -:capsule-util:debianMavenPom (Thread[#29,Daemon worker,5,main]) completed. Took 0.533 secs. -:capsule-util:jar (Thread[#29,Daemon worker,5,main]) started. -:capsule-util:jar -Putting task artifact state for task ':capsule-util:jar' into context took 0.0 secs. -Up-to-date check for task ':capsule-util:jar' took 0.055 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:debianMavenPom' took 0.003 secs. It is not up-to-date because: No history is available. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/java/Capsule.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/java/Capsule.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. 5 warnings -:capsule:compileJava (Thread[#41,Task worker for ':',5,main]) completed. Took 13.95 secs. -:capsule:processResources (Thread[#41,Task worker for ':',5,main]) started. +:capsule:compileJava (Thread[#29,Daemon worker,5,main]) completed. Took 8.795 secs. +:capsule:processResources (Thread[#29,Daemon worker,5,main]) started. :capsule:processResources Putting task artifact state for task ':capsule:processResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/resources', not found Skipping task ':capsule:processResources' as it has no source files and no previous output files. :capsule:processResources NO-SOURCE -:capsule:processResources (Thread[#41,Task worker for ':',5,main]) completed. Took 0.023 secs. -:capsule:classes (Thread[#41,Task worker for ':',5,main]) started. +:capsule:processResources (Thread[#29,Daemon worker,5,main]) completed. Took 0.009 secs. +:capsule:classes (Thread[#29,Daemon worker,5,main]) started. :capsule:classes Skipping task ':capsule:classes' as it has no actions. -:capsule:classes (Thread[#41,Task worker for ':',5,main]) completed. Took 0.002 secs. -:capsule:debianMavenPom (Thread[#41,Task worker for ':',5,main]) started. +:capsule:classes (Thread[#29,Daemon worker,5,main]) completed. Took 0.006 secs. +:capsule:debianMavenPom (Thread[#29,Daemon worker,5,main]) started. :capsule:debianMavenPom Putting task artifact state for task ':capsule:debianMavenPom' into context took 0.0 secs. -Up-to-date check for task ':capsule:debianMavenPom' took 0.008 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:debianMavenPom' took 0.002 secs. It is not up-to-date because: No history is available. + Generating pom file /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/debian/capsule-util.pom Generating pom file /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/debian/capsule.pom -:capsule:debianMavenPom (Thread[#41,Task worker for ':',5,main]) completed. Took 0.065 secs. -:capsule:jar (Thread[#41,Task worker for ':',5,main]) started. +:capsule-util:debianMavenPom (Thread[#41,Task worker for ':',5,main]) completed. Took 0.401 secs. +:capsule-util:jar (Thread[#41,Task worker for ':',5,main]) started. +:capsule-util:jar +Putting task artifact state for task ':capsule-util:jar' into context took 0.0 secs. +:capsule:debianMavenPom (Thread[#29,Daemon worker,5,main]) completed. Took 0.116 secs. +:capsule:jar (Thread[#29,Daemon worker,5,main]) started. :capsule:jar Putting task artifact state for task ':capsule:jar' into context took 0.0 secs. -:capsule-util:jar (Thread[#29,Daemon worker,5,main]) completed. Took 0.409 secs. -Up-to-date check for task ':capsule:jar' took 0.031 secs. It is not up-to-date because: +Up-to-date check for task ':capsule:jar' took 0.022 secs. It is not up-to-date because: + No history is available. +Up-to-date check for task ':capsule-util:jar' took 0.049 secs. It is not up-to-date because: No history is available. -:capsule:jar (Thread[#41,Task worker for ':',5,main]) completed. Took 0.112 secs. +:capsule:jar (Thread[#29,Daemon worker,5,main]) completed. Took 0.182 secs. +:capsule-util:jar (Thread[#41,Task worker for ':',5,main]) completed. Took 0.26 secs. -BUILD SUCCESSFUL in 41s +BUILD SUCCESSFUL in 27s 7 actionable tasks: 7 executed dh_auto_test -O--buildsystem=gradle mkdir -p .gradle/init.d cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ - gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=3 test + gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=capsule-nextflow -Dfile.encoding=UTF-8 --parallel --max-workers=4 test openjdk version "21.0.5" 2024-10-15 OpenJDK Runtime Environment (build 21.0.5+11-Debian-1) OpenJDK Server VM (build 21.0.5+11-Debian-1, mixed mode, sharing) @@ -1356,17 +1392,17 @@ To honour the JVM settings for this build a new JVM will be forked. Please consider using the daemon: https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. Starting process 'Gradle build daemon'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1 Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java --add-opens java.base/java.lang=ALL-UNNAMED -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -cp /usr/share/gradle/lib/gradle-launcher-4.4.1.jar org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 Successfully started process 'Gradle build daemon' -An attempt to start the daemon took 4.023 secs. -The client will now receive all logging from the daemon (pid: 14138). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-14138.out.log +An attempt to start the daemon took 3.025 secs. +The client will now receive all logging from the daemon (pid: 19581). The daemon log file: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/daemon/4.4.1/daemon-19581.out.log Daemon will be stopped at the end of the build stopping after processing Closing daemon's stdin at end of input. The daemon will no longer process any standard input. -Using 3 worker leases. +Using 4 worker leases. Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@383e75 Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@383e75 Creating new cache for fileHashes, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/fileHashes.bin, access org.gradle.cache.internal.DefaultCacheAccess@1a0efa2 Starting Build -Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@8318b4 +Creating new cache for metadata-1.1/results, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/transforms-1/metadata-1.1/results.bin, access org.gradle.cache.internal.DefaultCacheAccess@17296d7 Settings evaluated using settings file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/settings.gradle'. Projects loaded. Root project using build file '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/build.gradle'. Included projects: [root project 'capsule', project ':capsule', project ':capsule-util'] @@ -1384,60 +1420,60 @@ Linking the generated javadoc to the system JDK API documentation All projects evaluated. Selected primary task 'test' from project : -Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@79f295 +Creating new cache for annotation-processors, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileContent/annotation-processors.bin, access org.gradle.cache.internal.DefaultCacheAccess@1187a30 Tasks to be executed: [task ':capsule:compileJava', task ':capsule:processResources', task ':capsule:classes', task ':capsule:debianMavenPom', task ':capsule:jar', task ':capsule-util:compileJava', task ':capsule-util:processResources', task ':capsule-util:classes', task ':capsule-util:debianMavenPom', task ':capsule-util:jar', task ':capsule:compileTestJava', task ':capsule:processTestResources', task ':capsule:testClasses', task ':capsule:test', task ':capsule-util:compileTestJava', task ':capsule-util:processTestResources', task ':capsule-util:testClasses', task ':capsule-util:test'] Creating new cache for resourceHashesCache, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/fileHashes/resourceHashesCache.bin, access org.gradle.cache.internal.DefaultCacheAccess@1a0efa2 -Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@8cef6d -Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@1ea7131 +Creating new cache for taskHistory, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/4.4.1/taskHistory/taskHistory.bin, access org.gradle.cache.internal.DefaultCacheAccess@1d7fc9c +Creating new cache for outputFiles, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/buildOutputCleanup/outputFiles.bin, access org.gradle.cache.internal.DefaultCacheAccess@1eb3462 :capsule:compileJava (Thread[#41,Task worker for ':',5,main]) started. +:capsule:compileJava :capsule-util:compileJava (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule-util:compileJava -:capsule:compileJava -Putting task artifact state for task ':capsule-util:compileJava' into context took 0.014 secs. -Putting task artifact state for task ':capsule:compileJava' into context took 0.015 secs. -Skipping task ':capsule:compileJava' as it is up-to-date (took 0.179 secs). +Putting task artifact state for task ':capsule:compileJava' into context took 0.013 secs. +Putting task artifact state for task ':capsule-util:compileJava' into context took 0.012 secs. +Skipping task ':capsule:compileJava' as it is up-to-date (took 0.104 secs). :capsule:compileJava UP-TO-DATE -:capsule:compileJava (Thread[#41,Task worker for ':',5,main]) completed. Took 0.306 secs. -:capsule:processResources (Thread[#41,Task worker for ':',5,main]) started. +:capsule:compileJava (Thread[#41,Task worker for ':',5,main]) completed. Took 0.204 secs. +:capsule:processResources (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule:processResources Putting task artifact state for task ':capsule:processResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/main/resources', not found Skipping task ':capsule:processResources' as it has no source files and no previous output files. :capsule:processResources NO-SOURCE -:capsule:processResources (Thread[#41,Task worker for ':',5,main]) completed. Took 0.051 secs. -:capsule:classes (Thread[#41,Task worker for ':',5,main]) started. +:capsule:processResources (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.021 secs. +:capsule:classes (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule:classes Skipping task ':capsule:classes' as it has no actions. :capsule:classes UP-TO-DATE -:capsule:classes (Thread[#41,Task worker for ':',5,main]) completed. Took 0.008 secs. -:capsule:debianMavenPom (Thread[#41,Task worker for ':',5,main]) started. +:capsule:classes (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.002 secs. +:capsule:debianMavenPom (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule:debianMavenPom Putting task artifact state for task ':capsule:debianMavenPom' into context took 0.0 secs. -Skipping task ':capsule:debianMavenPom' as it is up-to-date (took 0.01 secs). +Skipping task ':capsule:debianMavenPom' as it is up-to-date (took 0.009 secs). :capsule:debianMavenPom UP-TO-DATE -:capsule:debianMavenPom (Thread[#41,Task worker for ':',5,main]) completed. Took 0.027 secs. -:capsule:jar (Thread[#41,Task worker for ':',5,main]) started. +:capsule:debianMavenPom (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.018 secs. +:capsule:jar (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule:jar Putting task artifact state for task ':capsule:jar' into context took 0.0 secs. -Skipping task ':capsule:jar' as it is up-to-date (took 0.032 secs). +Skipping task ':capsule:jar' as it is up-to-date (took 0.015 secs). :capsule:jar UP-TO-DATE -:capsule:jar (Thread[#41,Task worker for ':',5,main]) completed. Took 0.061 secs. -:capsule:processTestResources (Thread[#41,Task worker for ':',5,main]) started. +:capsule:jar (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.034 secs. +:capsule:processTestResources (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule:processTestResources Putting task artifact state for task ':capsule:processTestResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/resources', not found Skipping task ':capsule:processTestResources' as it has no source files and no previous output files. :capsule:processTestResources NO-SOURCE -:capsule:processTestResources (Thread[#41,Task worker for ':',5,main]) completed. Took 0.017 secs. -Skipping task ':capsule-util:compileJava' as it is up-to-date (took 0.456 secs). +:capsule:processTestResources (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.006 secs. +Skipping task ':capsule-util:compileJava' as it is up-to-date (took 0.295 secs). :capsule-util:compileJava UP-TO-DATE -:capsule-util:compileJava (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.552 secs. +:capsule-util:compileJava (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.369 secs. :capsule-util:processResources (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule-util:processResources Putting task artifact state for task ':capsule-util:processResources' into context took 0.0 secs. -Skipping task ':capsule-util:processResources' as it is up-to-date (took 0.02 secs). +Skipping task ':capsule-util:processResources' as it is up-to-date (took 0.011 secs). :capsule-util:processResources UP-TO-DATE -:capsule-util:processResources (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.033 secs. +:capsule-util:processResources (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.02 secs. :capsule-util:classes (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule-util:classes Skipping task ':capsule-util:classes' as it has no actions. @@ -1446,54 +1482,52 @@ :capsule-util:debianMavenPom (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule-util:debianMavenPom Putting task artifact state for task ':capsule-util:debianMavenPom' into context took 0.0 secs. -Skipping task ':capsule-util:debianMavenPom' as it is up-to-date (took 0.017 secs). +Skipping task ':capsule-util:debianMavenPom' as it is up-to-date (took 0.007 secs). :capsule-util:debianMavenPom UP-TO-DATE -:capsule-util:debianMavenPom (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.027 secs. +:capsule-util:debianMavenPom (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.013 secs. :capsule-util:jar (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule-util:jar Putting task artifact state for task ':capsule-util:jar' into context took 0.0 secs. -Skipping task ':capsule-util:jar' as it is up-to-date (took 0.032 secs). +Skipping task ':capsule-util:jar' as it is up-to-date (took 0.014 secs). :capsule-util:jar UP-TO-DATE -:capsule-util:jar (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.043 secs. +:capsule-util:jar (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.025 secs. :capsule:compileTestJava (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule:compileTestJava Putting task artifact state for task ':capsule:compileTestJava' into context took 0.0 secs. -:capsule-util:compileTestJava (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:compileTestJava (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule-util:compileTestJava Putting task artifact state for task ':capsule-util:compileTestJava' into context took 0.0 secs. -Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@add943 +Creating new cache for metadata-2.36/module-metadata, path /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@12ac8b3 Loading the Maven rules... Replacing junit:junit:jar:4.12 -> junit:junit:jar:4.x + Replacing junit:junit:jar:4.12 -> junit:junit:jar:4.x + Replacing org.truth0:truth:jar:0.23 -> com.google.truth:truth:jar:debian Replacing org.truth0:truth:jar:0.23 -> com.google.truth:truth:jar:debian Passing through com.google.truth:truth-parent:jar:debian Replacing com.google.jimfs:jimfs:jar:1.1 -> com.google.jimfs:jimfs:jar:debian Passing through com.google.jimfs:jimfs-parent:jar:debian - Ignoring org.jooq:joor:jar:0.9.6 + Replacing com.google.jimfs:jimfs:jar:1.1 -> com.google.jimfs:jimfs:jar:debian Ignoring org.jooq:joor:jar:0.9.6 Passing through org.hamcrest:hamcrest:jar:debian - Passing through org.hamcrest:hamcrest:jar:debian Passing through com.google.guava:guava:jar:debian Passing through com.google.guava:guava:jar:debian Passing through com.google.guava:guava-parent:jar:debian - Passing through com.google.guava:guava-parent:jar:debian Passing through org.jsr-305:jsr305:jar:0.x - Passing through org.jsr-305:jsr305:jar:0.x - Passing through com.google.errorprone:error_prone_annotations:jar:debian Passing through com.google.errorprone:error_prone_annotations:jar:debian Passing through com.google.errorprone:error_prone_parent:jar:debian - Passing through com.google.errorprone:error_prone_parent:jar:debian -Up-to-date check for task ':capsule-util:compileTestJava' took 7.071 secs. It is not up-to-date because: - No history is available. -Up-to-date check for task ':capsule:compileTestJava' took 7.127 secs. It is not up-to-date because: + Passing through com.google.errorprone:error_prone_annotations:jar:debian +Up-to-date check for task ':capsule:compileTestJava' took 4.865 secs. It is not up-to-date because: No history is available. -All input files are considered out-of-date for incremental task ':capsule-util:compileTestJava'. All input files are considered out-of-date for incremental task ':capsule:compileTestJava'. Use of target 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 +Compiling with JDK Java compiler API. +Up-to-date check for task ':capsule-util:compileTestJava' took 4.922 secs. It is not up-to-date because: + No history is available. +All input files are considered out-of-date for incremental task ':capsule-util:compileTestJava'. Use of target 1.7 is no longer supported, switching to 8 Use of source 1.7 is no longer supported, switching to 8 Compiling with JDK Java compiler API. -Compiling with JDK Java compiler API. warning: [options] source value 8 is obsolete and will be removed in a future release warning: [options] target value 8 is obsolete and will be removed in a future release warning: [options] source value 8 is obsolete and will be removed in a future release @@ -1501,52 +1535,46 @@ warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. 3 warnings -:capsule-util:compileTestJava (Thread[#29,Daemon worker,5,main]) completed. Took 17.411 secs. -:capsule-util:processTestResources (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:compileTestJava (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 10.068 secs. +:capsule-util:processTestResources (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule-util:processTestResources Putting task artifact state for task ':capsule-util:processTestResources' into context took 0.0 secs. file or directory '/build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/src/test/resources', not found Skipping task ':capsule-util:processTestResources' as it has no source files and no previous output files. :capsule-util:processTestResources NO-SOURCE -:capsule-util:processTestResources (Thread[#29,Daemon worker,5,main]) completed. Took 0.022 secs. -:capsule-util:testClasses (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:processTestResources (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.065 secs. +:capsule-util:testClasses (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule-util:testClasses Skipping task ':capsule-util:testClasses' as it has no actions. -:capsule-util:testClasses (Thread[#29,Daemon worker,5,main]) completed. Took 0.011 secs. -:capsule-util:test (Thread[#29,Daemon worker,5,main]) started. +:capsule-util:testClasses (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 0.01 secs. +:capsule-util:test (Thread[#43,Task worker for ':' Thread 3,5,main]) started. :capsule-util:test Putting task artifact state for task ':capsule-util:test' into context took 0.0 secs. Replacing org.jacoco:org.jacoco.agent:jar:0.7.9 -> org.jacoco:org.jacoco.agent:jar:debian Passing through org.jacoco:org.jacoco.build:jar:debian -Up-to-date check for task ':capsule-util:test' took 2.983 secs. It is not up-to-date because: - No history is available. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/java/TestCapsule.java uses or overrides a deprecated API. Note: Recompile with -Xlint:deprecation for details. Note: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/src/test/java/MyCapsule.java uses unchecked or unsafe operations. Note: Recompile with -Xlint:unchecked for details. 3 warnings -:capsule:compileTestJava (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 21.417 secs. +:capsule:compileTestJava (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 11.304 secs. :capsule:testClasses (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule:testClasses Skipping task ':capsule:testClasses' as it has no actions. -:capsule:testClasses (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.001 secs. +:capsule:testClasses (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 0.003 secs. :capsule:test (Thread[#42,Task worker for ':' Thread 2,5,main]) started. :capsule:test Putting task artifact state for task ':capsule:test' into context took 0.0 secs. -Up-to-date check for task ':capsule:test' took 0.118 secs. It is not up-to-date because: +Up-to-date check for task ':capsule-util:test' took 1.519 secs. It is not up-to-date because: No history is available. -Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_fc1b9679c6e1350d5631161edc643359/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath10210204830692239721txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' -Starting process 'Gradle Test Executor 2'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_fc1b9679c6e1350d5631161edc643359/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath5363935151015700316txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 2' +Up-to-date check for task ':capsule:test' took 0.678 secs. It is not up-to-date because: + No history is available. +Starting process 'Gradle Test Executor 1'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_fc1b9679c6e1350d5631161edc643359/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath5716077377544877437txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 1' +Starting process 'Gradle Test Executor 2'. Working directory: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util Command: /usr/lib/jvm/java-21-openjdk-armhf/bin/java -Djava.protocol.handler.pkgs=co.paralleluniverse.filesystem -Dorg.gradle.native=false -javaagent:build/tmp/expandedArchives/org.jacoco.agent-debian.jar_fc1b9679c6e1350d5631161edc643359/jacocoagent.jar=destfile=build/jacoco/test.exec,append=true,dumponexit=true,output=file @/tmp/gradle-worker-classpath338638232144140445txt -Dfile.encoding=UTF-8 -Duser.country=US -Duser.language=en -Duser.variant -ea worker.org.gradle.process.internal.worker.GradleWorkerMain 'Gradle Test Executor 2' Successfully started process 'Gradle Test Executor 1' Successfully started process 'Gradle Test Executor 2' -Gradle Test Executor 2 started executing tests. Gradle Test Executor 1 started executing tests. -Running test: Test testExtendClasspath(NextflowLoaderTest) -Running test: Test testSimpleExtract(co.paralleluniverse.capsule.CapsuleLauncherTest) -Running test: Test testExtendDeps(NextflowLoaderTest) -Running test: Test testWrapperCapsuleAgent(CapsuleAgentTest) - -CapsuleAgentTest > testWrapperCapsuleAgent SKIPPED +Gradle Test Executor 2 started executing tests. Running test: Test testEmbeddedCaplet(CapsuleTest) CapsuleTest > testEmbeddedCaplet SKIPPED @@ -1565,7 +1593,6 @@ Running test: Test testNatives1(CapsuleTest) CapsuleTest > testNatives1 SKIPPED -Gradle Test Executor 2 finished executing tests. Running test: Test testNatives2(CapsuleTest) CapsuleTest > testNatives2 SKIPPED @@ -1624,6 +1651,7 @@ CapsuleTest > testCapsuleInClassPath SKIPPED Running test: Test testJDKClassPath(CapsuleTest) +Gradle Test Executor 1 finished executing tests. CapsuleTest > testJDKClassPath SKIPPED Running test: Test testParseCommandLineArguments(CapsuleTest) @@ -1674,12 +1702,16 @@ Running test: Test testApplicationArtifact(CapsuleTest) CapsuleTest > testApplicationArtifact SKIPPED -Finished generating test XML results (0.151 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/test-results/test -Generating HTML test report... -Finished generating test html results (0.392 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/reports/tests/test -:capsule:test (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 17.296 secs. -Running test: Test testEnableJMX(co.paralleluniverse.capsule.CapsuleLauncherTest) +Running test: Test testExtendClasspath(NextflowLoaderTest) +Running test: Test testExtendDeps(NextflowLoaderTest) +Running test: Test testWrapperCapsuleAgent(CapsuleAgentTest) + +CapsuleAgentTest > testWrapperCapsuleAgent SKIPPED Running test: Test testAddZip1(co.paralleluniverse.capsule.JarTest) +Finished generating test XML results (0.047 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/test-results/test +Generating HTML test report... +Finished generating test html results (0.163 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule/build/reports/tests/test +:capsule:test (Thread[#42,Task worker for ':' Thread 2,5,main]) completed. Took 8.63 secs. Running test: Test testAddZip2(co.paralleluniverse.capsule.JarTest) Running test: Test testAddZip3(co.paralleluniverse.capsule.JarTest) Running test: Test testAddZip4(co.paralleluniverse.capsule.JarTest) @@ -1694,13 +1726,15 @@ Running test: Test testCreateJar(co.paralleluniverse.capsule.JarTest) Running test: Test testAddDirectory1(co.paralleluniverse.capsule.JarTest) Running test: Test testAddDirectory2(co.paralleluniverse.capsule.JarTest) -Gradle Test Executor 1 finished executing tests. -Finished generating test XML results (0.007 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/test-results/test +Running test: Test testSimpleExtract(co.paralleluniverse.capsule.CapsuleLauncherTest) +Running test: Test testEnableJMX(co.paralleluniverse.capsule.CapsuleLauncherTest) +Gradle Test Executor 2 finished executing tests. +Finished generating test XML results (0.005 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/test-results/test Generating HTML test report... -Finished generating test html results (0.027 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/reports/tests/test -:capsule-util:test (Thread[#29,Daemon worker,5,main]) completed. Took 26.009 secs. +Finished generating test html results (0.016 secs) into: /build/reproducible-path/capsule-nextflow-1.1.1+dfsg/capsule-util/build/reports/tests/test +:capsule-util:test (Thread[#43,Task worker for ':' Thread 3,5,main]) completed. Took 11.804 secs. -BUILD SUCCESSFUL in 1m 8s +BUILD SUCCESSFUL in 39s 11 actionable tasks: 4 executed, 7 up-to-date create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=gradle @@ -1732,12 +1766,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/14060/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/6096 and its subdirectories -I: Current time: Mon Dec 16 11:26:22 -12 2024 -I: pbuilder-time-stamp: 1734391582 +I: removing directory /srv/workspace/pbuilder/14060 and its subdirectories +I: Current time: Tue Dec 17 13:30:04 +14 2024 +I: pbuilder-time-stamp: 1734391804