Diff of the two buildlogs: -- --- b1/build.log 2024-12-08 13:15:04.728500711 +0000 +++ b2/build.log 2024-12-08 13:18:19.923603117 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sun Dec 8 01:13:31 -12 2024 -I: pbuilder-time-stamp: 1733663611 +I: Current time: Mon Dec 9 03:15:17 +14 2024 +I: pbuilder-time-stamp: 1733663717 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying compiler-flags.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/23957/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/D01_modify_environment starting +debug: Running on ff4a. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 8 13:15 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='f4956585455541f0b9caefe8829f4a0a' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='23957' - PS1='# ' - PS2='> ' + INVOCATION_ID=bb4bf19ac5f049cb8a29e9b7f882bec4 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=15290 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.26KtDSmY/pbuilderrc_gBKW --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.26KtDSmY/b1 --logfile b1/build.log dascrubber_1.1-4.dsc' - SUDO_GID='110' - SUDO_UID='103' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.26KtDSmY/pbuilderrc_R1WY --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.26KtDSmY/b2 --logfile b2/build.log dascrubber_1.1-4.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt64z 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/23957/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -139,7 +171,7 @@ Get: 27 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] -Fetched 19.1 MB in 2s (8668 kB/s) +Fetched 19.1 MB in 2s (8990 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19685 files and directories currently installed.) @@ -270,7 +302,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/dascrubber-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dascrubber_1.1-4_source.changes +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/dascrubber-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dascrubber_1.1-4_source.changes dpkg-buildpackage: info: source package dascrubber dpkg-buildpackage: info: source version 1.1-4 dpkg-buildpackage: info: source distribution unstable @@ -280,7 +316,7 @@ debian/rules clean dh clean dh_auto_clean - make -j3 clean + make -j4 clean make[1]: Entering directory '/build/reproducible-path/dascrubber-1.1' rm -f DAScover DASqv DAStrim DASpatch DASedit DASmap DASrealign REPcover REPqv REPtrim rm -fr *.dSYM @@ -293,11 +329,12 @@ dh_autoreconf dh_auto_configure dh_auto_build - make -j3 "INSTALL=install --strip-program=true" + make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dascrubber-1.1' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAScover.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DAScover cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASqv.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DASqv cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAStrim.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DAStrim +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASpatch.c align.h align.c DB.c DB.h QV.c QV.h -lm -o DASpatch In function 'gap_status', inlined from 'GAP_ANALYSIS' at DAStrim.c:1885:19, inlined from 'GAPS' at DAStrim.c:1982:14: @@ -332,6 +369,20 @@ align.c:4317:11: note: 'L' was declared here 4317 | int L, D; | ^ +align.c: In function 'Compute_Alignment': +align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] + 4424 | n = L/sizeof(uint16); + | ~^~~~~~~~~~~~~~~ +align.c:4317:11: note: 'L' was declared here + 4317 | int L, D; + | ^ +DB.c: In function 'Trim_DB': +DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] + 691 | if (css) + | ^ +DB.c:604:32: note: 'css' was declared here + 604 | int allflag, cutoff, css; + | ^~~ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -346,11 +397,7 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ -align.c: In function 'Compute_Alignment': DB.c: In function 'Read_All_Sequences': -align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] - 4424 | n = L/sizeof(uint16); - | ~^~~~~~~~~~~~~~~ DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); | ^~~~~~~~~ @@ -359,6 +406,19 @@ DB.c:66:12: note: returned from 'malloc' 66 | if ((p = malloc(size)) == NULL) | ^~~~~~~~~~~~ +DB.c: In function 'Read_All_Sequences': +DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] + 1875 | free(seq); + | ^~~~~~~~~ +In function 'Malloc', + inlined from 'Read_All_Sequences' at DB.c:1852:18: +DB.c:66:12: note: returned from 'malloc' + 66 | if ((p = malloc(size)) == NULL) + | ^~~~~~~~~~~~ +align.c: In function 'Compute_Alignment': +align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] + 4424 | n = L/sizeof(uint16); + | ~^~~~~~~~~~~~~~~ align.c:4317:11: note: 'L' was declared here 4317 | int L, D; | ^ @@ -387,6 +447,14 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +QV.c: In function 'Build_Table': +QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] + 127 | { uint64 symbol = (uint64) (node->lft); + | ^ +QV.c: In function 'Huffman': +QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] + 174 | node[value].lft = (HTree *) (uint64) i; + | ^ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -394,8 +462,9 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASpatch.c align.h align.c DB.c DB.h QV.c QV.h -lm -o DASpatch cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASedit.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DASedit +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASmap.c DB.c DB.h QV.c QV.h -lm -o DASmap +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASrealign.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DASrealign DB.c: In function 'Read_All_Sequences': DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); @@ -413,7 +482,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASmap.c DB.c DB.h QV.c QV.h -lm -o DASmap DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -430,6 +498,7 @@ DB.c:66:12: note: returned from 'malloc' 66 | if ((p = malloc(size)) == NULL) | ^~~~~~~~~~~~ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPcover.c DB.c DB.h QV.c QV.h -lm -o REPcover QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -438,21 +507,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DASrealign.c align.c align.h DB.c DB.h QV.c QV.h -lm -o DASrealign -align.c: In function 'Compute_Alignment': -align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] - 4424 | n = L/sizeof(uint16); - | ~^~~~~~~~~~~~~~~ -align.c:4317:11: note: 'L' was declared here - 4317 | int L, D; - | ^ -align.c: In function 'Compute_Alignment': -align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] - 4424 | n = L/sizeof(uint16); - | ~^~~~~~~~~~~~~~~ -align.c:4317:11: note: 'L' was declared here - 4317 | int L, D; - | ^ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -460,22 +514,7 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ -DB.c: In function 'Trim_DB': -DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] - 691 | if (css) - | ^ -DB.c:604:32: note: 'css' was declared here - 604 | int allflag, cutoff, css; - | ^~~ -DB.c: In function 'Read_All_Sequences': -DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] - 1875 | free(seq); - | ^~~~~~~~~ -In function 'Malloc', - inlined from 'Read_All_Sequences' at DB.c:1852:18: -DB.c:66:12: note: returned from 'malloc' - 66 | if ((p = malloc(size)) == NULL) - | ^~~~~~~~~~~~ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPqv.c DB.c DB.h QV.c QV.h -lm -o REPqv DB.c: In function 'Read_All_Sequences': DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); @@ -493,23 +532,6 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -QV.c: In function 'Build_Table': -QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 127 | { uint64 symbol = (uint64) (node->lft); - | ^ -QV.c: In function 'Huffman': -QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 174 | node[value].lft = (HTree *) (uint64) i; - | ^ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPcover.c DB.c DB.h QV.c QV.h -lm -o REPcover -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPqv.c DB.c DB.h QV.c QV.h -lm -o REPqv -DB.c: In function 'Trim_DB': -DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] - 691 | if (css) - | ^ -DB.c:604:32: note: 'css' was declared here - 604 | int allflag, cutoff, css; - | ^~~ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -517,22 +539,6 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ -align.c: In function 'Compute_Alignment': -align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] - 4424 | n = L/sizeof(uint16); - | ~^~~~~~~~~~~~~~~ -align.c:4317:11: note: 'L' was declared here - 4317 | int L, D; - | ^ -DB.c: In function 'Read_All_Sequences': -DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] - 1875 | free(seq); - | ^~~~~~~~~ -In function 'Malloc', - inlined from 'Read_All_Sequences' at DB.c:1852:18: -DB.c:66:12: note: returned from 'malloc' - 66 | if ((p = malloc(size)) == NULL) - | ^~~~~~~~~~~~ DB.c: In function 'Read_All_Sequences': DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); @@ -542,6 +548,7 @@ DB.c:66:12: note: returned from 'malloc' 66 | if ((p = malloc(size)) == NULL) | ^~~~~~~~~~~~ +cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPtrim.c DB.c DB.h QV.c QV.h -lm -o REPtrim QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -550,14 +557,13 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ -QV.c: In function 'Build_Table': -QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] - 127 | { uint64 symbol = (uint64) (node->lft); - | ^ -QV.c: In function 'Huffman': -QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] - 174 | node[value].lft = (HTree *) (uint64) i; - | ^ +align.c: In function 'Compute_Alignment': +align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] + 4424 | n = L/sizeof(uint16); + | ~^~~~~~~~~~~~~~~ +align.c:4317:11: note: 'L' was declared here + 4317 | int L, D; + | ^ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -565,7 +571,6 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ -cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dascrubber-1.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now REPtrim.c DB.c DB.h QV.c QV.h -lm -o REPtrim DB.c: In function 'Read_All_Sequences': DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); @@ -575,6 +580,20 @@ DB.c:66:12: note: returned from 'malloc' 66 | if ((p = malloc(size)) == NULL) | ^~~~~~~~~~~~ +align.c: In function 'Compute_Alignment': +align.c:4424:17: warning: 'L' may be used uninitialized [-Wmaybe-uninitialized] + 4424 | n = L/sizeof(uint16); + | ~^~~~~~~~~~~~~~~ +align.c:4317:11: note: 'L' was declared here + 4317 | int L, D; + | ^ +DB.c: In function 'Trim_DB': +DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] + 691 | if (css) + | ^ +DB.c:604:32: note: 'css' was declared here + 604 | int allflag, cutoff, css; + | ^~~ QV.c: In function 'Build_Table': QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 127 | { uint64 symbol = (uint64) (node->lft); @@ -583,6 +602,15 @@ QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] 174 | node[value].lft = (HTree *) (uint64) i; | ^ +DB.c: In function 'Read_All_Sequences': +DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] + 1875 | free(seq); + | ^~~~~~~~~ +In function 'Malloc', + inlined from 'Read_All_Sequences' at DB.c:1852:18: +DB.c:66:12: note: returned from 'malloc' + 66 | if ((p = malloc(size)) == NULL) + | ^~~~~~~~~~~~ DB.c: In function 'Trim_DB': DB.c:691:14: warning: 'css' may be used uninitialized [-Wmaybe-uninitialized] 691 | if (css) @@ -590,6 +618,14 @@ DB.c:604:32: note: 'css' was declared here 604 | int allflag, cutoff, css; | ^~~ +QV.c: In function 'Build_Table': +QV.c:127:23: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] + 127 | { uint64 symbol = (uint64) (node->lft); + | ^ +QV.c: In function 'Huffman': +QV.c:174:33: warning: cast to pointer from integer of different size [-Wint-to-pointer-cast] + 174 | node[value].lft = (HTree *) (uint64) i; + | ^ DB.c: In function 'Read_All_Sequences': DB.c:1875:15: warning: 'free' called on pointer 'p' with nonzero offset 1 [-Wfree-nonheap-object] 1875 | free(seq); @@ -614,7 +650,7 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dascrubber-1.1' dh_auto_install - make -j3 install DESTDIR=/build/reproducible-path/dascrubber-1.1/debian/dascrubber AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + make -j4 install DESTDIR=/build/reproducible-path/dascrubber-1.1/debian/dascrubber AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dascrubber-1.1' install -d /build/reproducible-path/dascrubber-1.1/debian/dascrubber/usr/bin install DAScover DASqv DAStrim DASpatch DASedit DASmap DASrealign REPcover REPqv REPtrim /build/reproducible-path/dascrubber-1.1/debian/dascrubber/usr/bin @@ -647,8 +683,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'dascrubber' in '../dascrubber_1.1-4_armhf.deb'. dpkg-deb: building package 'dascrubber-dbgsym' in '../dascrubber-dbgsym_1.1-4_armhf.deb'. +dpkg-deb: building package 'dascrubber' in '../dascrubber_1.1-4_armhf.deb'. dpkg-genbuildinfo --build=binary -O../dascrubber_1.1-4_armhf.buildinfo dpkg-genchanges --build=binary -O../dascrubber_1.1-4_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -656,12 +692,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/15290/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/23957 and its subdirectories -I: Current time: Sun Dec 8 01:15:01 -12 2024 -I: pbuilder-time-stamp: 1733663701 +I: removing directory /srv/workspace/pbuilder/15290 and its subdirectories +I: Current time: Mon Dec 9 03:18:16 +14 2024 +I: pbuilder-time-stamp: 1733663896