Diff of the two buildlogs: -- --- b1/build.log 2024-11-07 22:26:02.236608693 +0000 +++ b2/build.log 2024-11-07 22:40:10.930346035 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Nov 7 10:21:14 -12 2024 -I: pbuilder-time-stamp: 1731018074 +I: Current time: Fri Nov 8 12:26:11 +14 2024 +I: pbuilder-time-stamp: 1731018371 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration @@ -29,52 +29,84 @@ dpkg-source: info: applying modify_testing.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/31331/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/D01_modify_environment starting +debug: Running on virt64b. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Nov 7 22:26 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='trixie' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=trixie + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='9503be4294f3456387e900ed2e78be1b' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='31331' - PS1='# ' - PS2='> ' + INVOCATION_ID=9085e7a445dc42febb3bfbd7f4015fd4 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=31244 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wSVwLYpj/pbuilderrc_X1F9 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wSVwLYpj/b1 --logfile b1/build.log icb-utils_2.0.1+git20161002.afee1d9-5.dsc' - SUDO_GID='112' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.wSVwLYpj/pbuilderrc_7fUS --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.wSVwLYpj/b2 --logfile b2/build.log icb-utils_2.0.1+git20161002.afee1d9-5.dsc' + SUDO_GID=113 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32b 6.1.0-26-armmp-lpae #1 SMP Debian 6.1.112-1 (2024-09-30) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-26-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/31331/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -395,7 +427,7 @@ Get: 249 http://deb.debian.org/debian trixie/main armhf maven-repo-helper all 1.11 [142 kB] Get: 250 http://deb.debian.org/debian trixie/main armhf unzip armhf 6.0-28 [152 kB] Get: 251 http://deb.debian.org/debian trixie/main armhf maven-debian-helper all 2.6.5 [108 kB] -Fetched 223 MB in 5s (47.9 MB/s) +Fetched 223 MB in 7s (30.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpipeline1:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19690 files and directories currently installed.) @@ -1222,8 +1254,8 @@ Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Thu Nov 7 22:23:40 UTC 2024. -Universal Time is now: Thu Nov 7 22:23:40 UTC 2024. +Local time is now: Thu Nov 7 22:31:15 UTC 2024. +Universal Time is now: Thu Nov 7 22:31:15 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libgeronimo-annotation-1.3-spec-java (1.3-1) ... @@ -1619,7 +1651,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../icb-utils_2.0.1+git20161002.afee1d9-5_source.changes +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for trixie +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../icb-utils_2.0.1+git20161002.afee1d9-5_source.changes dpkg-buildpackage: info: source package icb-utils dpkg-buildpackage: info: source version 2.0.1+git20161002.afee1d9-5 dpkg-buildpackage: info: source distribution unstable @@ -1633,7 +1669,7 @@ mh_unpatchpoms -plibicb-utils-java dh_autoreconf_clean -O--buildsystem=maven jh_clean -O--buildsystem=maven -Duplicate specification "u=s" for option "u" +Duplicate specification "unlink|u" for option "u" dh_clean -O--buildsystem=maven debian/rules binary dh binary --buildsystem=maven --with javahelper @@ -1642,7 +1678,7 @@ dh_auto_configure -O--buildsystem=maven mh_patchpoms -plibicb-utils-java --debian-build --keep-pom-version --maven-repo=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9/debian/maven-repo jh_linkjars -O--buildsystem=maven -Duplicate specification "u=s" for option "u" +Duplicate specification "unlink|u" for option "u" dh_auto_build -O--buildsystem=maven /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9 -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9/debian -Dmaven.repo.local=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9/debian/maven-repo --batch-mode package -DskipTests -Dnotimestamp=true -Dlocale=en_US OpenJDK Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release. @@ -1740,8 +1776,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 29.711 s -[INFO] Finished at: 2024-11-07T10:24:51-12:00 +[INFO] Total time: 02:07 min +[INFO] Finished at: 2024-11-08T12:36:25+14:00 [INFO] ------------------------------------------------------------------------ jh_build -O--buildsystem=maven dh_auto_test -O--buildsystem=maven @@ -1784,346 +1820,369 @@ [INFO] T E S T S [INFO] ------------------------------------------------------- [INFO] Running edu.cornell.med.icb.ip.TestIpUtils -[WARNING] Tests run: 13, Failures: 0, Errors: 0, Skipped: 5, Time elapsed: 0.192 s - in edu.cornell.med.icb.ip.TestIpUtils +[WARNING] Tests run: 13, Failures: 0, Errors: 0, Skipped: 5, Time elapsed: 0.729 s - in edu.cornell.med.icb.ip.TestIpUtils [INFO] Running edu.cornell.med.icb.ip.TestIpAddress [INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in edu.cornell.med.icb.ip.TestIpAddress -[INFO] Running edu.cornell.med.icb.io.TestConditionsParser -10:25:00.373 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false -10:25:00.384 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' -10:25:00.384 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean -10:25:00.388 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 -10:25:00.389 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' -10:25:00.389 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' -10:25:00.390 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: -10:25:00.391 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' -10:25:00.391 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character -10:25:00.392 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 -10:25:00.393 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' -10:25:00.393 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' -10:25:00.394 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 -10:25:00.395 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' -10:25:00.395 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' -10:25:00.396 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 -10:25:00.396 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' -10:25:00.397 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer -10:25:00.398 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 -10:25:00.398 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' -10:25:00.398 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' -10:25:00.400 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 -10:25:00.400 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' -10:25:00.400 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' -10:25:00.404 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Setting default value: 0.0 -10:25:00.405 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Converting 'BigDecimal' value '0.0' to type 'BigDecimal' -10:25:00.405 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - No conversion required, value is already a BigDecimal -10:25:00.406 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Setting default value: 0 -10:25:00.407 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Converting 'BigInteger' value '0' to type 'BigInteger' -10:25:00.407 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - No conversion required, value is already a BigInteger -10:25:00.407 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' -10:25:00.408 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: -10:25:00.409 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' -10:25:00.409 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character -10:25:00.409 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 -10:25:00.409 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' -10:25:00.409 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' -10:25:00.410 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 -10:25:00.410 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' -10:25:00.410 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' -10:25:00.410 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 -10:25:00.410 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' -10:25:00.411 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer -10:25:00.411 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 -10:25:00.411 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' -10:25:00.411 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' -10:25:00.411 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 -10:25:00.412 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' -10:25:00.412 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' -10:25:00.413 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Setting default value: -10:25:00.414 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '' to type 'String' -10:25:00.427 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Z@b48321 -10:25:00.428 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'boolean[]' value '[Z@b48321' to type 'boolean[]' -10:25:00.428 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a boolean[] -10:25:00.428 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [B@267862 -10:25:00.429 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'byte[]' value '[B@267862' to type 'byte[]' -10:25:00.429 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a byte[] -10:25:00.429 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [C@13da22c -10:25:00.429 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'char[]' value '[C@13da22c' to type 'char[]' -10:25:00.429 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a char[] -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [D@1248c21 -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'double[]' value '[D@1248c21' to type 'double[]' -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a double[] -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [F@166e06f -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'float[]' value '[F@166e06f' to type 'float[]' -10:25:00.430 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a float[] -10:25:00.431 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [I@72da34 -10:25:00.431 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'int[]' value '[I@72da34' to type 'int[]' -10:25:00.432 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a int[] -10:25:00.432 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [J@10c2d26 -10:25:00.432 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'long[]' value '[J@10c2d26' to type 'long[]' -10:25:00.432 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a long[] -10:25:00.432 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [S@1147d0 -10:25:00.433 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'short[]' value '[S@1147d0' to type 'short[]' -10:25:00.433 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a short[] -10:25:00.433 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigDecimal;@d7f7e0 -10:25:00.433 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@d7f7e0' to type 'BigDecimal[]' -10:25:00.433 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigDecimal[] -10:25:00.434 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigInteger;@1070868 -10:25:00.434 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@1070868' to type 'BigInteger[]' -10:25:00.434 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigInteger[] -10:25:00.434 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Boolean;@364841 -10:25:00.434 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Boolean[]' value '[Ljava.lang.Boolean;@364841' to type 'Boolean[]' -10:25:00.435 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Boolean[] -10:25:00.435 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Byte;@1717824 -10:25:00.435 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Byte[]' value '[Ljava.lang.Byte;@1717824' to type 'Byte[]' -10:25:00.435 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Byte[] -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Character;@9e725a -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Character[]' value '[Ljava.lang.Character;@9e725a' to type 'Character[]' -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Character[] -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Double;@13b46c3 -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Double[]' value '[Ljava.lang.Double;@13b46c3' to type 'Double[]' -10:25:00.436 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Double[] -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Float;@a50da -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Float[]' value '[Ljava.lang.Float;@a50da' to type 'Float[]' -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Float[] -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Integer;@17badd3 -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Integer[]' value '[Ljava.lang.Integer;@17badd3' to type 'Integer[]' -10:25:00.437 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Integer[] -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Long;@1dc67c2 -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Long[]' value '[Ljava.lang.Long;@1dc67c2' to type 'Long[]' -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Long[] -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Short;@2bd765 -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Short[]' value '[Ljava.lang.Short;@2bd765' to type 'Short[]' -10:25:00.438 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Short[] -10:25:00.439 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.String;@a2da20 -10:25:00.439 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'String[]' value '[Ljava.lang.String;@a2da20' to type 'String[]' -10:25:00.439 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a String[] -10:25:00.439 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Class;@11bdc27 -10:25:00.440 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Class[]' value '[Ljava.lang.Class;@11bdc27' to type 'Class[]' -10:25:00.440 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Class[] -10:25:00.440 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Date;@11274d2 -10:25:00.440 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Date[]' value '[Ljava.util.Date;@11274d2' to type 'Date[]' -10:25:00.440 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Date[] -10:25:00.441 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Calendar;@b0b186 -10:25:00.441 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Calendar[]' value '[Ljava.util.Calendar;@b0b186' to type 'Calendar[]' -10:25:00.441 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Calendar[] -10:25:00.441 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.io.File;@164985f -10:25:00.442 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.io.File[]' value '[Ljava.io.File;@164985f' to type 'java.io.File[]' -10:25:00.442 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.io.File[] -10:25:00.442 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Date;@9ba3fb -10:25:00.442 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@9ba3fb' to type 'java.sql.Date[]' -10:25:00.442 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Date[] -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Time;@472554 -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@472554' to type 'java.sql.Time[]' -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Time[] -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Timestamp;@5b461a -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@5b461a' to type 'java.sql.Timestamp[]' -10:25:00.444 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Timestamp[] -10:25:00.445 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.net.URL;@17f23d9 -10:25:00.445 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.net.URL[]' value '[Ljava.net.URL;@17f23d9' to type 'java.net.URL[]' -10:25:00.445 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.net.URL[] -10:25:00.498 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' -10:25:00.499 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' -10:25:00.499 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.499 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' -10:25:00.523 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' -10:25:00.523 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' -10:25:00.529 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' -10:25:00.529 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' -10:25:00.529 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.529 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' -10:25:00.545 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' -10:25:00.545 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' -10:25:00.545 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.546 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' -10:25:00.546 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' -10:25:00.546 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' -10:25:00.546 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' -10:25:00.547 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' -10:25:00.547 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.547 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' -10:25:00.548 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '8.367' to class 'double' -10:25:00.548 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '8.367' to type 'Double' -10:25:00.548 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.548 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '8.367' -10:25:00.549 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3bf' to class 'java.lang.String' -10:25:00.549 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '3bf' to type 'String' -10:25:00.555 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '567' to class 'int' -10:25:00.556 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '567' to type 'Integer' -10:25:00.556 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.556 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '567' -10:25:00.563 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean -10:25:00.584 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -10:25:00.584 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.585 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.585 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.586 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -10:25:00.586 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -10:25:00.586 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.586 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -10:25:00.587 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean -10:25:00.588 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -10:25:00.588 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.589 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.589 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.590 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -10:25:00.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -10:25:00.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.590 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -10:25:00.590 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -10:25:00.591 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -10:25:00.591 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.591 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -10:25:00.596 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'int[]' -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.597 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.598 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '30' to type 'Integer' -10:25:00.598 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.598 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '30' -10:25:00.598 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'double[]' -10:25:00.598 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 2.5' to type 'Double' -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.5' -10:25:00.599 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 1.5' to type 'Double' -10:25:00.600 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.600 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '1.5' -10:25:00.600 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'java.lang.String[]' -10:25:00.600 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' -10:25:00.601 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field3b' to type 'String' -10:25:00.601 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field 3c' to type 'String' -10:25:00.601 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'int[]' -10:25:00.601 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'double[]' -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.602 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' -10:25:00.603 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'java.lang.String[]' -10:25:00.603 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' -10:25:00.611 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -10:25:00.612 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.612 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.612 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.612 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -10:25:00.613 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -10:25:00.613 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.613 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -10:25:00.613 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -10:25:00.613 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.614 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.614 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.614 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -10:25:00.614 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -10:25:00.615 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.615 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -10:25:00.615 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -10:25:00.615 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -10:25:00.615 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.616 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -10:25:00.618 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -10:25:00.618 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.618 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.618 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.618 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3.5' to class 'double' -10:25:00.619 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' -10:25:00.619 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.619 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' -10:25:00.619 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'field3' to class 'java.lang.String' -10:25:00.620 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' -10:25:00.620 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -10:25:00.620 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.620 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.620 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.621 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '2.2' to class 'double' -10:25:00.621 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' -10:25:00.621 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.621 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' -10:25:00.621 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'threedefault' to class 'java.lang.String' -10:25:00.622 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' -10:25:00.628 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -10:25:00.628 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.628 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.628 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.629 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -10:25:00.629 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -10:25:00.629 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.629 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -10:25:00.630 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '10' to class 'int' -10:25:00.630 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '10' to type 'Integer' -10:25:00.630 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.630 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '10' -10:25:00.630 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -10:25:00.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.631 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.631 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '20' to class 'int' -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '20' to type 'Integer' -10:25:00.632 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.633 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '20' -10:25:00.636 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' -10:25:00.637 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' -10:25:00.637 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.637 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' -10:25:00.638 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' -10:25:00.639 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.639 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' -10:25:00.639 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' -10:25:00.640 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion -10:25:00.641 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' -[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.65 s - in edu.cornell.med.icb.io.TestConditionsParser -[INFO] Running edu.cornell.med.icb.io.TestTSVReader -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in edu.cornell.med.icb.io.TestTSVReader -[INFO] Running edu.cornell.med.icb.io.TestResourceFinder -10:25:00.677 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.679 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.680 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader -10:25:00.681 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.682 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.683 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using system class loader -10:25:00.683 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] as file in filesystem -10:25:00.684 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - ... fo`und url is [file:/tmp/temp-file.txt] -10:25:00.686 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.686 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.686 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader -10:25:00.687 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.688 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.689 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using system class loader -10:25:00.689 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] as file in filesystem -10:25:00.692 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.694 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.694 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using system class loader -10:25:00.694 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.696 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e -10:25:00.697 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using system class loader -10:25:00.697 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] as file in filesystem -[WARNING] Tests run: 5, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.008 s - in edu.cornell.med.icb.io.TestResourceFinder +[INFO] Running edu.cornell.med.icb.util.TestICBStringNormalizer +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestICBStringNormalizer +[INFO] Running edu.cornell.med.icb.util.TestICBFilenameUtils +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in edu.cornell.med.icb.util.TestICBFilenameUtils +[INFO] Running edu.cornell.med.icb.util.TestRandomAdapter +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestRandomAdapter +[INFO] Running edu.cornell.med.icb.util.TestVersionUtils +12:37:02.027 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN +12:37:02.087 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN +12:37:02.119 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: 2.6 +[WARNING] Tests run: 4, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 1.364 s - in edu.cornell.med.icb.util.TestVersionUtils +[INFO] Running edu.cornell.med.icb.util.TestICBStringUtils +[INFO] Tests run: 25, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.341 s - in edu.cornell.med.icb.util.TestICBStringUtils +[INFO] Running edu.cornell.med.icb.util.TestBoundedPriorityQueue +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.144 s - in edu.cornell.med.icb.util.TestBoundedPriorityQueue +[INFO] Running edu.cornell.med.icb.util.TestSimpleChecksum +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.033 s - in edu.cornell.med.icb.util.TestSimpleChecksum +[INFO] Running edu.cornell.med.icb.iterators.TestTsvLineIterator +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.135 s - in edu.cornell.med.icb.iterators.TestTsvLineIterator +[INFO] Running edu.cornell.med.icb.iterators.TestTextFileLineIterator +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.iterators.TestTextFileLineIterator +[INFO] Running edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.348 s - in edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator [INFO] Running edu.cornell.med.icb.identifier.TestIndexedIdentifier -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.035 s - in edu.cornell.med.icb.identifier.TestIndexedIdentifier +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.132 s - in edu.cornell.med.icb.identifier.TestIndexedIdentifier +[INFO] Running edu.cornell.med.icb.io.TestResourceFinder +12:37:03.824 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.840 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.841 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader +12:37:03.842 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.857 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.858 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] using system class loader +12:37:03.858 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [/tmp/temp-file.txt] as file in filesystem +12:37:03.859 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - ... fo`und url is [file:/tmp/temp-file.txt] +12:37:03.869 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.869 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.870 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [temp-file.txt] using system class loader +12:37:03.871 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.882 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.883 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] using system class loader +12:37:03.883 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [./temp-file.txt] as file in filesystem +12:37:03.898 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.913 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.914 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport.ipr] using system class loader +12:37:03.914 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using context class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.925 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using class loader jdk.internal.loader.ClassLoaders$AppClassLoader@10dea4e +12:37:03.926 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] using system class loader +12:37:03.927 [main] DEBUG edu.cornell.med.icb.io.ResourceFinder - Trying to find [testsupport/testsupport.ipr] as file in filesystem +[WARNING] Tests run: 5, Failures: 0, Errors: 0, Skipped: 2, Time elapsed: 0.128 s - in edu.cornell.med.icb.io.TestResourceFinder +[INFO] Running edu.cornell.med.icb.io.TestTSVReader +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.io.TestTSVReader +[INFO] Running edu.cornell.med.icb.io.TestConditionsParser +12:37:04.171 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false +12:37:04.180 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' +12:37:04.181 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean +12:37:04.197 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 +12:37:04.198 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' +12:37:04.198 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' +12:37:04.212 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: +12:37:04.212 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' +12:37:04.213 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character +12:37:04.214 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 +12:37:04.215 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' +12:37:04.215 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' +12:37:04.224 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 +12:37:04.225 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' +12:37:04.225 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' +12:37:04.226 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 +12:37:04.227 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' +12:37:04.227 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer +12:37:04.241 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 +12:37:04.241 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' +12:37:04.241 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' +12:37:04.249 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 +12:37:04.250 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' +12:37:04.250 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' +12:37:04.266 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Setting default value: 0.0 +12:37:04.267 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - Converting 'BigDecimal' value '0.0' to type 'BigDecimal' +12:37:04.267 [main] DEBUG org.apache.commons.beanutils.converters.BigDecimalConverter - No conversion required, value is already a BigDecimal +12:37:04.276 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Setting default value: 0 +12:37:04.277 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - Converting 'BigInteger' value '0' to type 'BigInteger' +12:37:04.277 [main] DEBUG org.apache.commons.beanutils.converters.BigIntegerConverter - No conversion required, value is already a BigInteger +12:37:04.277 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Setting default value: false +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - Converting 'Boolean' value 'false' to type 'Boolean' +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.BooleanConverter - No conversion required, value is already a Boolean +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Setting default value: 0 +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converting 'Integer' value '0' to type 'Byte' +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.ByteConverter - Converted to Byte value '0' +12:37:04.278 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Setting default value: +12:37:04.279 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - Converting 'Character' value ' ' to type 'Character' +12:37:04.279 [main] DEBUG org.apache.commons.beanutils.converters.CharacterConverter - No conversion required, value is already a Character +12:37:04.279 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Setting default value: 0 +12:37:04.279 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'Integer' value '0' to type 'Double' +12:37:04.279 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '0.0' +12:37:04.280 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Setting default value: 0 +12:37:04.292 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converting 'Integer' value '0' to type 'Float' +12:37:04.292 [main] DEBUG org.apache.commons.beanutils.converters.FloatConverter - Converted to Float value '0.0' +12:37:04.293 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Setting default value: 0 +12:37:04.293 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'Integer' value '0' to type 'Integer' +12:37:04.293 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No conversion required, value is already a Integer +12:37:04.293 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Setting default value: 0 +12:37:04.293 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converting 'Integer' value '0' to type 'Long' +12:37:04.294 [main] DEBUG org.apache.commons.beanutils.converters.LongConverter - Converted to Long value '0' +12:37:04.294 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Setting default value: 0 +12:37:04.294 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converting 'Integer' value '0' to type 'Short' +12:37:04.294 [main] DEBUG org.apache.commons.beanutils.converters.ShortConverter - Converted to Short value '0' +12:37:04.296 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Setting default value: +12:37:04.308 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '' to type 'String' +12:37:04.368 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Z@469c48 +12:37:04.369 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'boolean[]' value '[Z@469c48' to type 'boolean[]' +12:37:04.369 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a boolean[] +12:37:04.369 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [B@e955a8 +12:37:04.369 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'byte[]' value '[B@e955a8' to type 'byte[]' +12:37:04.369 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a byte[] +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [C@1677d1 +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'char[]' value '[C@1677d1' to type 'char[]' +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a char[] +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [D@fa0f47 +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'double[]' value '[D@fa0f47' to type 'double[]' +12:37:04.370 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a double[] +12:37:04.371 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [F@316c74 +12:37:04.371 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'float[]' value '[F@316c74' to type 'float[]' +12:37:04.371 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a float[] +12:37:04.371 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [I@1329a49 +12:37:04.371 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'int[]' value '[I@1329a49' to type 'int[]' +12:37:04.372 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a int[] +12:37:04.380 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [J@1479c6 +12:37:04.380 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'long[]' value '[J@1479c6' to type 'long[]' +12:37:04.380 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a long[] +12:37:04.381 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [S@1010382 +12:37:04.381 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'short[]' value '[S@1010382' to type 'short[]' +12:37:04.381 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a short[] +12:37:04.382 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigDecimal;@16faea6 +12:37:04.382 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigDecimal[]' value '[Ljava.math.BigDecimal;@16faea6' to type 'BigDecimal[]' +12:37:04.382 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigDecimal[] +12:37:04.382 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.math.BigInteger;@670002 +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'BigInteger[]' value '[Ljava.math.BigInteger;@670002' to type 'BigInteger[]' +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a BigInteger[] +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Boolean;@1c386c8 +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Boolean[]' value '[Ljava.lang.Boolean;@1c386c8' to type 'Boolean[]' +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Boolean[] +12:37:04.383 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Byte;@dec4a +12:37:04.384 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Byte[]' value '[Ljava.lang.Byte;@dec4a' to type 'Byte[]' +12:37:04.392 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Byte[] +12:37:04.392 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Character;@cddd20 +12:37:04.393 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Character[]' value '[Ljava.lang.Character;@cddd20' to type 'Character[]' +12:37:04.393 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Character[] +12:37:04.393 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Double;@13f4916 +12:37:04.393 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Double[]' value '[Ljava.lang.Double;@13f4916' to type 'Double[]' +12:37:04.393 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Double[] +12:37:04.394 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Float;@15a5ed1 +12:37:04.394 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Float[]' value '[Ljava.lang.Float;@15a5ed1' to type 'Float[]' +12:37:04.394 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Float[] +12:37:04.394 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Integer;@c2931c +12:37:04.395 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Integer[]' value '[Ljava.lang.Integer;@c2931c' to type 'Integer[]' +12:37:04.395 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Integer[] +12:37:04.395 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Long;@167e60c +12:37:04.395 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Long[]' value '[Ljava.lang.Long;@167e60c' to type 'Long[]' +12:37:04.395 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Long[] +12:37:04.396 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Short;@aaecc3 +12:37:04.408 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Short[]' value '[Ljava.lang.Short;@aaecc3' to type 'Short[]' +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Short[] +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.String;@dda9cc +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'String[]' value '[Ljava.lang.String;@dda9cc' to type 'String[]' +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a String[] +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.lang.Class;@13d61fb +12:37:04.409 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Class[]' value '[Ljava.lang.Class;@13d61fb' to type 'Class[]' +12:37:04.410 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Class[] +12:37:04.410 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Date;@114c583 +12:37:04.410 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Date[]' value '[Ljava.util.Date;@114c583' to type 'Date[]' +12:37:04.410 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Date[] +12:37:04.410 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.util.Calendar;@1dced80 +12:37:04.411 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'Calendar[]' value '[Ljava.util.Calendar;@1dced80' to type 'Calendar[]' +12:37:04.411 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a Calendar[] +12:37:04.411 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.io.File;@e117e3 +12:37:04.411 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.io.File[]' value '[Ljava.io.File;@e117e3' to type 'java.io.File[]' +12:37:04.412 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.io.File[] +12:37:04.412 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Date;@386f16 +12:37:04.424 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Date[]' value '[Ljava.sql.Date;@386f16' to type 'java.sql.Date[]' +12:37:04.425 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Date[] +12:37:04.425 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Time;@90b489 +12:37:04.425 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Time[]' value '[Ljava.sql.Time;@90b489' to type 'java.sql.Time[]' +12:37:04.425 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Time[] +12:37:04.425 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.sql.Timestamp;@b7fc54 +12:37:04.426 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.sql.Timestamp[]' value '[Ljava.sql.Timestamp;@b7fc54' to type 'java.sql.Timestamp[]' +12:37:04.426 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.sql.Timestamp[] +12:37:04.426 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Setting default value: [Ljava.net.URL;@22fc4c +12:37:04.426 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - Converting 'java.net.URL[]' value '[Ljava.net.URL;@22fc4c' to type 'java.net.URL[]' +12:37:04.426 [main] DEBUG org.apache.commons.beanutils.converters.ArrayConverter - No conversion required, value is already a java.net.URL[] +12:37:04.639 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' +12:37:04.648 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' +12:37:04.649 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:04.649 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' +12:37:04.740 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' +12:37:04.748 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' +12:37:04.822 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' +12:37:04.822 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' +12:37:04.822 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:04.822 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' +12:37:04.875 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '456' to class 'double' +12:37:04.875 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '456' to type 'Double' +12:37:04.875 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:04.876 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '456.0' +12:37:04.892 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'def' to class 'java.lang.String' +12:37:04.893 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'def' to type 'String' +12:37:04.893 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '123' to class 'int' +12:37:04.893 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '123' to type 'Integer' +12:37:04.893 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:04.893 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '123' +12:37:04.894 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '8.367' to class 'double' +12:37:04.894 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '8.367' to type 'Double' +12:37:04.894 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:04.895 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '8.367' +12:37:04.895 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3bf' to class 'java.lang.String' +12:37:04.895 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value '3bf' to type 'String' +12:37:04.918 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '567' to class 'int' +12:37:04.919 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '567' to type 'Integer' +12:37:04.919 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:04.919 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '567' +12:37:04.933 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean +12:37:05.029 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +12:37:05.030 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.030 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.030 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.031 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +12:37:05.031 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +12:37:05.031 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.031 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +12:37:05.032 [main] DEBUG org.apache.commons.beanutils.BeanUtils - Cloning bean: edu.cornell.med.icb.io.SampleBean +12:37:05.041 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +12:37:05.042 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.042 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.042 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.043 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +12:37:05.043 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +12:37:05.043 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.043 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +12:37:05.043 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +12:37:05.044 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +12:37:05.044 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.056 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +12:37:05.076 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'int[]' +12:37:05.077 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.077 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.077 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.077 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.077 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.078 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.078 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '30' to type 'Integer' +12:37:05.078 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.078 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '30' +12:37:05.078 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'double[]' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 2.5' to type 'Double' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.5' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value ' 1.5' to type 'Double' +12:37:05.079 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.080 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '1.5' +12:37:05.092 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[3] to class 'java.lang.String[]' +12:37:05.093 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' +12:37:05.093 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field3b' to type 'String' +12:37:05.093 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value ' field 3c' to type 'String' +12:37:05.093 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'int[]' +12:37:05.094 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.094 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.094 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.094 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'double[]' +12:37:05.094 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' +12:37:05.095 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.095 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' +12:37:05.095 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert String[1] to class 'java.lang.String[]' +12:37:05.095 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' +12:37:05.122 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +12:37:05.122 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.122 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.123 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.123 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +12:37:05.123 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +12:37:05.124 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.124 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +12:37:05.137 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +12:37:05.137 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.137 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.137 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.138 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +12:37:05.138 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +12:37:05.138 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.138 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +12:37:05.139 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +12:37:05.139 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +12:37:05.139 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.139 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +12:37:05.149 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +12:37:05.150 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.150 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.150 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.150 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '3.5' to class 'double' +12:37:05.151 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '3.5' to type 'Double' +12:37:05.151 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.151 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '3.5' +12:37:05.151 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'field3' to class 'java.lang.String' +12:37:05.151 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'field3' to type 'String' +12:37:05.152 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +12:37:05.164 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.165 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.165 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.165 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '2.2' to class 'double' +12:37:05.165 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '2.2' to type 'Double' +12:37:05.165 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.166 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '2.2' +12:37:05.166 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string 'threedefault' to class 'java.lang.String' +12:37:05.166 [main] DEBUG org.apache.commons.beanutils.converters.StringConverter - Converting 'String' value 'threedefault' to type 'String' +12:37:05.183 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +12:37:05.184 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.193 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.193 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.193 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +12:37:05.194 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +12:37:05.194 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.194 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +12:37:05.195 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '10' to class 'int' +12:37:05.195 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '10' to type 'Integer' +12:37:05.195 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.195 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '10' +12:37:05.195 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +12:37:05.196 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.196 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.204 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.205 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +12:37:05.205 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +12:37:05.205 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.205 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +12:37:05.206 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '20' to class 'int' +12:37:05.206 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '20' to type 'Integer' +12:37:05.206 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.206 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '20' +12:37:05.222 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '50' to class 'int' +12:37:05.222 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '50' to type 'Integer' +12:37:05.222 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.222 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '50' +12:37:05.223 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '60.4' to class 'double' +12:37:05.223 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '60.4' to type 'Double' +12:37:05.223 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.224 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '60.4' +12:37:05.236 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '40' to class 'int' +12:37:05.237 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '40' to type 'Integer' +12:37:05.237 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.237 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '40' +12:37:05.238 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '80' to class 'int' +12:37:05.238 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converting 'String' value '80' to type 'Integer' +12:37:05.238 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - No NumberFormat, using default conversion +12:37:05.238 [main] DEBUG org.apache.commons.beanutils.converters.IntegerConverter - Converted to Integer value '80' +12:37:05.238 [main] DEBUG org.apache.commons.beanutils.ConvertUtils - Convert string '70.3' to class 'double' +12:37:05.239 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converting 'String' value '70.3' to type 'Double' +12:37:05.239 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - No NumberFormat, using default conversion +12:37:05.239 [main] DEBUG org.apache.commons.beanutils.converters.DoubleConverter - Converted to Double value '70.3' +[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.216 s - in edu.cornell.med.icb.io.TestConditionsParser [INFO] Running edu.cornell.med.icb.cli.TestUseModality (-m|--mode) Mode of execution, one of: mode1 @@ -2131,30 +2190,7 @@ [-h|--help] This message. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.05 s - in edu.cornell.med.icb.cli.TestUseModality -[INFO] Running edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.097 s - in edu.cornell.med.icb.iterators.TestPreSortedMergeTextFilesLineIterator -[INFO] Running edu.cornell.med.icb.iterators.TestTsvLineIterator -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in edu.cornell.med.icb.iterators.TestTsvLineIterator -[INFO] Running edu.cornell.med.icb.iterators.TestTextFileLineIterator -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.iterators.TestTextFileLineIterator -[INFO] Running edu.cornell.med.icb.util.TestBoundedPriorityQueue -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.036 s - in edu.cornell.med.icb.util.TestBoundedPriorityQueue -[INFO] Running edu.cornell.med.icb.util.TestSimpleChecksum -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.01 s - in edu.cornell.med.icb.util.TestSimpleChecksum -[INFO] Running edu.cornell.med.icb.util.TestRandomAdapter -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.048 s - in edu.cornell.med.icb.util.TestRandomAdapter -[INFO] Running edu.cornell.med.icb.util.TestICBFilenameUtils -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestICBFilenameUtils -[INFO] Running edu.cornell.med.icb.util.TestICBStringNormalizer -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in edu.cornell.med.icb.util.TestICBStringNormalizer -[INFO] Running edu.cornell.med.icb.util.TestVersionUtils -10:25:01.172 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN -10:25:01.174 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: UNKNOWN -10:25:01.180 [main] DEBUG edu.cornell.med.icb.util.VersionUtils - Implementation-Version: 2.6 -[WARNING] Tests run: 4, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.01 s - in edu.cornell.med.icb.util.TestVersionUtils -[INFO] Running edu.cornell.med.icb.util.TestICBStringUtils -[INFO] Tests run: 25, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.073 s - in edu.cornell.med.icb.util.TestICBStringUtils +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.265 s - in edu.cornell.med.icb.cli.TestUseModality [INFO] [INFO] Results: [INFO] @@ -2163,8 +2199,8 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 36.040 s -[INFO] Finished at: 2024-11-07T10:25:31-12:00 +[INFO] Total time: 53.494 s +[INFO] Finished at: 2024-11-08T12:37:36+14:00 [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=maven @@ -2197,15 +2233,15 @@ [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 1.613 s -[INFO] Finished at: 2024-11-07T10:25:37-12:00 +[INFO] Total time: 36.329 s +[INFO] Finished at: 2024-11-08T12:38:31+14:00 [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -plibicb-utils-java --base-directory=/build/reproducible-path/icb-utils-2.0.1\+git20161002.afee1d9 --non-explore Analysing pom.xml... > dpkg --search /usr/share/maven-repo/colt/colt/*/* dpkg failed to execute successfully Offline mode. Give up looking for package containing /usr/share/maven-repo/colt/colt -Nov 07, 2024 10:25:47 AM org.debian.maven.packager.DependenciesSolver$ToResolve resolve +Nov 08, 2024 12:39:23 PM org.debian.maven.packager.DependenciesSolver$ToResolve resolve SEVERE: Cannot resolve dependencies in /build/reproducible-path/icb-utils-2.0.1+git20161002.afee1d9/pom.xml: Dependency not found colt:colt:jar:debian ERROR: pom.xml: dependency is not packaged in the Maven repository for Debian: colt:colt:debian @@ -2213,7 +2249,7 @@ Some problems were found in this project, exiting... mh_unpatchpoms -plibicb-utils-java jh_installjavadoc -O--buildsystem=maven -Duplicate specification "author|A=s" for option "A" +Duplicate specification "A" for option "A" dh_installdocs -O--buildsystem=maven dh_installchangelogs -O--buildsystem=maven dh_installsystemduser -O--buildsystem=maven @@ -2221,7 +2257,7 @@ dh_link -O--buildsystem=maven jh_installlibs -O--buildsystem=maven jh_classpath -O--buildsystem=maven -Duplicate specification "V:s" for option "V" +Duplicate specification "version|V" for option "V" jh_manifest -O--buildsystem=maven Duplicate specification "version|V" for option "V" jh_exec -O--buildsystem=maven @@ -2244,12 +2280,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/31244/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/31331 and its subdirectories -I: Current time: Thu Nov 7 10:25:58 -12 2024 -I: pbuilder-time-stamp: 1731018358 +I: removing directory /srv/workspace/pbuilder/31244 and its subdirectories +I: Current time: Fri Nov 8 12:40:04 +14 2024 +I: pbuilder-time-stamp: 1731019204