Diff of the two buildlogs:
--
--- b1/build.log 2025-01-29 01:50:55.446096984 +0000
+++ b2/build.log 2025-01-29 16:24:29.457863314 +0000
@@ -1,6 +1,6 @@
I: pbuilder: network access will be disabled during build
-I: Current time: Tue Jan 28 10:14:07 -12 2025
-I: pbuilder-time-stamp: 1738102447
+I: Current time: Wed Jan 29 16:02:24 +14 2025
+I: pbuilder-time-stamp: 1738116144
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
@@ -34,52 +34,84 @@
dpkg-source: info: applying doxygen_mathjax_path.patch
I: Not using root during the build.
I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/6867/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/D01_modify_environment starting
+debug: Running on ff64a.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 Jan 29 02:03 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/D02_print_environment starting
I: set
- BUILDDIR='/build/reproducible-path'
- BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
- BUILDUSERNAME='pbuilder1'
- BUILD_ARCH='armhf'
- DEBIAN_FRONTEND='noninteractive'
- DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 '
- DISTRIBUTION='trixie'
- HOME='/root'
- HOST_ARCH='armhf'
+ BASH=/bin/sh
+ BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+ BASH_ALIASES=()
+ BASH_ARGC=()
+ BASH_ARGV=()
+ BASH_CMDS=()
+ BASH_LINENO=([0]="12" [1]="0")
+ BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+ BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+ BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
+ BASH_VERSION='5.2.37(1)-release'
+ BUILDDIR=/build/reproducible-path
+ BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+ BUILDUSERNAME=pbuilder2
+ BUILD_ARCH=armhf
+ DEBIAN_FRONTEND=noninteractive
+ DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 '
+ DIRSTACK=()
+ DISTRIBUTION=trixie
+ EUID=0
+ FUNCNAME=([0]="Echo" [1]="main")
+ GROUPS=()
+ HOME=/root
+ HOSTNAME=i-capture-the-hostname
+ HOSTTYPE=arm
+ HOST_ARCH=armhf
IFS='
'
- INVOCATION_ID='0a59197ab1b94c559f856ab436c60411'
- LANG='C'
- LANGUAGE='en_US:en'
- LC_ALL='C'
- MAIL='/var/mail/root'
- OPTIND='1'
- PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
- PBCURRENTCOMMANDLINEOPERATION='build'
- PBUILDER_OPERATION='build'
- PBUILDER_PKGDATADIR='/usr/share/pbuilder'
- PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
- PBUILDER_SYSCONFDIR='/etc'
- PPID='6867'
- PS1='# '
- PS2='> '
+ INVOCATION_ID=d64b989466644bcc8200cf7b053223c8
+ LANG=C
+ LANGUAGE=it_CH:it
+ LC_ALL=C
+ MACHTYPE=arm-unknown-linux-gnueabihf
+ MAIL=/var/mail/root
+ OPTERR=1
+ OPTIND=1
+ OSTYPE=linux-gnueabihf
+ PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+ PBCURRENTCOMMANDLINEOPERATION=build
+ PBUILDER_OPERATION=build
+ PBUILDER_PKGDATADIR=/usr/share/pbuilder
+ PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+ PBUILDER_SYSCONFDIR=/etc
+ PIPESTATUS=([0]="0")
+ POSIXLY_CORRECT=y
+ PPID=28716
PS4='+ '
- PWD='/'
- SHELL='/bin/bash'
- SHLVL='2'
- SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.yRlgTtve/pbuilderrc_bWG9 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.yRlgTtve/b1 --logfile b1/build.log libsbml_5.20.4+dfsg-0.1.dsc'
- SUDO_GID='110'
- SUDO_UID='103'
- SUDO_USER='jenkins'
- TERM='unknown'
- TZ='/usr/share/zoneinfo/Etc/GMT+12'
- USER='root'
- _='/usr/bin/systemd-run'
- http_proxy='http://10.0.0.15:3142/'
+ PWD=/
+ SHELL=/bin/bash
+ SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+ SHLVL=3
+ SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.yRlgTtve/pbuilderrc_k2Qb --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.yRlgTtve/b2 --logfile b2/build.log libsbml_5.20.4+dfsg-0.1.dsc'
+ SUDO_GID=114
+ SUDO_UID=109
+ SUDO_USER=jenkins
+ TERM=unknown
+ TZ=/usr/share/zoneinfo/Etc/GMT-14
+ UID=0
+ USER=root
+ _='I: set'
+ http_proxy=http://10.0.0.15:3142/
I: uname -a
- Linux virt32z 6.1.0-30-armmp-lpae #1 SMP Debian 6.1.124-1 (2025-01-12) armv7l GNU/Linux
+ Linux i-capture-the-hostname 6.1.0-30-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin
-I: user script /srv/workspace/pbuilder/6867/tmp/hooks/D02_print_environment finished
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
@@ -780,7 +812,7 @@
Get: 625 http://deb.debian.org/debian trixie/main armhf r-base-dev all 4.4.2-1 [4516 B]
Get: 626 http://deb.debian.org/debian trixie/main armhf rdfind armhf 1.6.0-1+b1 [37.8 kB]
Get: 627 http://deb.debian.org/debian trixie/main armhf swig armhf 4.3.0-0.1 [1440 kB]
-Fetched 402 MB in 42s (9656 kB/s)
+Fetched 402 MB in 13s (31.8 MB/s)
Preconfiguring packages ...
Selecting previously unselected package libpython3.13-minimal:armhf.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19568 files and directories currently installed.)
@@ -2815,8 +2847,8 @@
Setting up tzdata (2024b-6) ...
Current default time zone: 'Etc/UTC'
-Local time is now: Tue Jan 28 22:17:32 UTC 2025.
-Universal Time is now: Tue Jan 28 22:17:32 UTC 2025.
+Local time is now: Wed Jan 29 02:09:42 UTC 2025.
+Universal Time is now: Wed Jan 29 02:09:42 UTC 2025.
Run 'dpkg-reconfigure tzdata' if you wish to change it.
Setting up libxcb-present0:armhf (1.17.0-2+b1) ...
@@ -3539,7 +3571,11 @@
Building tag database...
-> Finished parsing the build-deps
I: Building the package
-I: Running cd /build/reproducible-path/libsbml-5.20.4+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libsbml_5.20.4+dfsg-0.1_source.changes
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/A99_set_merged_usr starting
+Not re-configuring usrmerge for trixie
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/reproducible-path/libsbml-5.20.4+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libsbml_5.20.4+dfsg-0.1_source.changes
dpkg-buildpackage: info: source package libsbml
dpkg-buildpackage: info: source version 5.20.4+dfsg-0.1
dpkg-buildpackage: info: source distribution unstable
@@ -3701,10 +3737,10 @@
To contact the developers directly, email libsbml-team@googlegroups.com
- Configured on host 'virt32z'
+ Configured on host 'i-capture-the-hostname'
host type = Linux
- host operating system = Linux 6.1.0-30-armmp-lpae
- host CPU architecture = armv7l
+ host operating system = Linux 6.1.0-30-arm64
+ host CPU architecture = aarch64
General build flags:
CC = /usr/bin/cc
@@ -3754,8 +3790,8 @@
-- Compression support is enabled for .bz2 files
--
----------------------------------------------------------------------
--- Configuring done (8.4s)
--- Generating done (1.0s)
+-- Configuring done (57.8s)
+-- Generating done (20.2s)
CMake Warning:
Manually-specified variables were not used by the project:
@@ -39085,7 +39121,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
@@ -39093,11 +39128,9 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.cpp:1282: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1204: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
@@ -39112,19 +39145,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
@@ -39135,116 +39161,129 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.cpp:377: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:468: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4484: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2266: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
@@ -39255,49 +39294,70 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
@@ -39308,35 +39368,9 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:293: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
@@ -39345,41 +39379,58 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
@@ -39391,38 +39442,32 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
@@ -39433,21 +39478,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:360: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:361: warning: Found unknown command '@_tbrief_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1383: warning: explicit link request to '_tFluxBoundOperation_t_t' could not be resolved
@@ -39459,10 +39495,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1262: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1263: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1264: warning: Found unknown command '@_tp_t'
@@ -39477,21 +39515,19 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:786: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1321: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNamespaces.cpp:464: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.cpp:2022: warning: Found unknown command '@_tendcond_t'
@@ -39500,33 +39536,33 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1869: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLTypeCodes.h:53: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLTypeCodes.h:54: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:195: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:556: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:112: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:387: warning: Found unknown command '@_tenum_t'
@@ -62714,12 +62750,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2442: warning: Found unknown command '@_tmemberof_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2452: warning: Found unknown command '@_tparam_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2454: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
GeneProductAssociation.cpp...
Generating docs for file GeneProductAssociation.h...
Generating docs for file GeneProductRef.cpp...
@@ -62803,7 +62833,13 @@
Generating docs for file GraphicalObject.cpp...
Generating docs for file GraphicalObject.h...
Generating docs for file Layout.cpp...
-Generating/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
+Generating/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
@@ -83296,7 +83332,7 @@
writing tag file...
Running plantuml with JAVA...
Running dot...
-Generating dot graphs using 5 parallel threads...
+Generating dot graphs using 7 parallel threads...
Running dot for graph 1/793
Running dot for graph 2/793
Running dot for graph 3/793
@@ -87870,7 +87906,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:546: warning: Found unknown command '@_tif_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:547: warning: Found unknown command '@_tmemberof_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:548: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLWriter.cpp:343: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3911: warning: Found unknown command '@_tsbmlconstant_t'
@@ -87878,11 +87913,9 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1161: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.cpp:1282: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1204: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/RDFAnnotationParser.cpp:1545: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2345: warning: Found unknown command '@_tc_t'
@@ -87897,19 +87930,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.h:2212: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2524: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:397: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:652: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/InSpeciesTypeBond.h:855: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:427: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:419: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1612: warning: Found unknown command '@_tc_t'
@@ -87920,116 +87946,129 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Input.h:1613: warning: explicit link request to '_tInputSign_t_t' could not be resolved
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1374: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1169: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLError.h:1058: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.cpp:696: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Priority.h:746: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:511: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/QualitativeSpecies.h:1169: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:939: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2101: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1947: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/FunctionDefinition.h:1268: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLErrorTable.h:45: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4389: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.cpp:377: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:468: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4484: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2266: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6650: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2007: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Model.h:6027: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1425: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureValue.h:632: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLReader.h:602: warning: Found unknown command '@_tcopydoc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1222: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/GeneralGlyph.h:987: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.cpp:676: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/ListOf.h:681: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLToken.h:1845: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2068: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.cpp:815: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLNamespaces.h:649: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/FunctionTerm.h:1053: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:2116: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Association.h:787: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeatureType.h:770: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1670: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Delay.h:1006: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2277: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:72: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:73: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_telse_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNodeType.h:74: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/RateRule.h:623: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1493: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1265: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1229: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1998: warning: Found unknown command '@_tp_t'
@@ -88040,49 +88079,70 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/DefaultTerm.h:662: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:935: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:936: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/MultiSpeciesType.h:1311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4235: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentMapInProduct.h:874: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:127: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1846: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLConvert.cpp:67: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/TextGlyph.h:455: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:806: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:938: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:945: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLTriple.h:365: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:279: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/BindingSiteSpeciesType.h:280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:560: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:561: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:562: warning: Found unknown command '@_tendif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:622: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.cpp:2592: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1656: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2502: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/CompartmentReference.h:754: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:1128: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:878: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1469: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3792: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesFeature.h:1270: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2079: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2080: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/InitialAssignment.h:1291: warning: Found unknown command '@_tc_t'
@@ -88093,35 +88153,9 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1545: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1546: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:511: warning: explicit link request to '_tFbcVariableType_t_t' could not be resolved
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:512: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3309: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2742: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2421: warning: Found unknown command '@_tif_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2422: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2423: warning: Found unknown command '@_tendif_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:293: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:2077: warning: Found unknown command '@_tc_t'
@@ -88130,41 +88164,58 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:1979: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:58: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/CompartmentGlyph.h:476: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductAssociation.h:987: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:4283: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLError.h:516: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/MathML.cpp:2089: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/ReactionGlyph.cpp:1070: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2260: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag <_tcode_t> found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2760: warning: Unsupported xml/html tag found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2423: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2424: warning: Unsupported symbol &_tnbsp_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:464: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/extension/FbcExtension.h:465: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Output.h:1340: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2677: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/SBaseRef.h:834: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.cpp:5524: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:4519: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_tldquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraint.h:1225: warning: Unsupported symbol &_trdquo_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3197: warning: Unsupported symbol &_tnbsp_t; found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/UserDefinedConstraintComponent.h:1246: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/BoundingBox.h:799: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3643: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/sbml/Transition.h:1710: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.cpp:2568: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:1886: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/AssignmentRule.h:655: warning: Found unknown command '@_tnote_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1449: warning: Found unknown command '@_tc_t'
@@ -88176,38 +88227,32 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag <_tcode_t> found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:2782: warning: Unsupported xml/html tag found
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2372: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/PossibleSpeciesFeatureValue.h:917: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.cpp:437: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/util/List.h:438: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLAttributes.h:2284: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Deletion.h:427: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:486: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:92: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:1004: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/Submodel.h:1504: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/validator/CompSBMLError.h:44: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/groups/validator/GroupsSBMLErrorTable.h:55: warning: Found unknown command '@_tcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProductRef.h:788: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeComponentIndex.h:791: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1567: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Rule.h:1568: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/comp/sbml/ReplacedElement.h:520: warning: Found unknown command '@_tc_t'
@@ -88218,21 +88263,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1331: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1332: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.cpp:2197: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLDocument.h:1754: warning: Found unknown command '@_tclass_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:360: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:361: warning: Found unknown command '@_tbrief_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_tldquo_t; found
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/extension/QualExtension.h:362: warning: Unsupported symbol &_trdquo_t; found
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:818: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/UnitDefinition.h:1992: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/Objective.h:1733: warning: Found unknown command '@_tsbmlconstant_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:87: warning: Found unknown command '@_tstruct_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaTokenizer.h:88: warning: Found unknown command '@_tsbmlbrief_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1382: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FluxBound.h:1383: warning: explicit link request to '_tFluxBoundOperation_t_t' could not be resolved
@@ -88244,10 +88280,12 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2588: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2436: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1262: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1263: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/LocalParameter.h:1264: warning: Found unknown command '@_tp_t'
@@ -88262,21 +88300,19 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SpeciesType.h:922: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Species.h:2311: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Event.h:2055: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/CompartmentType.h:929: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/multi/sbml/SpeciesTypeInstance.h:786: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNode.h:1892: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1288: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:2228: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/GeneProduct.h:1321: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/xml/XMLNamespaces.cpp:464: warning: Found unknown command '@_tendcond_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Compartment.cpp:2022: warning: Found unknown command '@_tendcond_t'
@@ -88285,33 +88321,33 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1869: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLTypeCodes.h:53: warning: Found unknown command '@_tenum_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBMLTypeCodes.h:54: warning: Found unknown command '@_tbrief_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2040: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Reaction.h:2041: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/validator/FbcSBMLError.h:48: warning: Found unknown command '@_tenum_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/fbc/sbml/FbcAnd.h:1056: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/ModelCreator.cpp:539: warning: Found unknown command '@_tendcond_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5300: warning: Found unknown command '@_tp_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/SBase.h:5301: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Unit.h:1783: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/Parameter.h:1717: warning: Found unknown command '@_tc_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:195: warning: Found unknown command '@_tclass_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/ASTNode.h:3893: warning: Found unknown command '@_tsbmlconstant_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/StoichiometryMath.h:715: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.cpp:556: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/math/FormulaParser.h:112: warning: Found unknown command '@_treturn_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/annotation/CVTerm.h:387: warning: Found unknown command '@_tenum_t'
@@ -111499,77 +111535,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2442: warning: Found unknown command '@_tmemberof_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2452: warning: Found unknown command '@_tparam_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2454: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2410: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2205: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2250: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2220: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2235: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2265: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1847: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1898: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1899: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1901: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1862: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1863: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1865: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1886: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1887: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1889: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1874: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1875: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1877: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1910: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1911: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1913: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2399: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2401: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2403: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1765: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1767: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2386: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2388: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2390: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2312: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2314: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2316: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tc_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1793: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1795: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1797: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2355: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2357: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2359: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2341: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2343: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2345: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2326: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2328: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2330: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2370: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2372: warning: Found unknown command '@_tcopydetails_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2374: warning: Found unknown command '@_tmemberof_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1781: warning: Found unknown command '@_tparam_t'
-/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1783: warning: Found unknown command '@_tmemberof_t'
GeneProductAssociation.cpp...
Generating docs for file GeneProductAssociation.h...
Generating docs for file GeneProductRef.cpp...
@@ -111653,7 +111618,78 @@
Generating docs for file GraphicalObject.cpp...
Generating docs for file GraphicalObject.h...
Generating docs for file Layout.cpp...
-Generating/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1825: warning: Found unknown command '@_tparam_t'
+Generating/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2410: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2280: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2205: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2250: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2220: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2235: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2265: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1847: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1895: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1898: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1899: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1901: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1859: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1862: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1863: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1865: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1883: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1886: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1887: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1889: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1871: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1874: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1875: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1877: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1907: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1910: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1911: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1913: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2396: warning: Found unknown command '@_treturn_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2399: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2401: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2403: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1765: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1767: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2386: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2388: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2390: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2312: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2314: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2316: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1789: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1790: warning: Found unknown command '@_tc_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1793: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1795: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1797: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2355: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2357: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2359: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2341: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2343: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2345: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2326: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2328: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2330: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2370: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2372: warning: Found unknown command '@_tcopydetails_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:2374: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1778: warning: Found unknown command '@_tp_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1781: warning: Found unknown command '@_tparam_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1783: warning: Found unknown command '@_tmemberof_t'
+/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1825: warning: Found unknown command '@_tparam_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1826: warning: Found unknown command '@_tparam_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1828: warning: Found unknown command '@_tmemberof_t'
/build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/layout/sbml/Layout.h:1808: warning: Found unknown command '@_tparam_t'
@@ -140771,7 +140807,7 @@
writing tag file...
Running plantuml with JAVA...
Running dot...
-Generating dot graphs using 5 parallel threads...
+Generating dot graphs using 7 parallel threads...
Running dot for graph 1/1596
Running dot for graph 2/1596
Running dot for graph 3/1596
@@ -154455,9 +154491,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:222: warning: included file callExternalValidator.py is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:225: warning: included file convertSBML.py is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:228: warning: included file createExampleSBML.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:231: warning: included file echoSBML.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:236: warning: included file getAllElementsWithNotes.py is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:238: warning: included file printAnnotation.py is not found. Check your EXAMPLE_PATH
-path/libsbml-5.20.4+dfsg/docs/src/libsbml-math.txt...
Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-math.txt...
Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-news.txt...
@@ -154544,7 +154577,10 @@
Generating docs for example callExternalValidator.py...
Generating docs for example convertSBML.py...
Generating docs for example createExampleSBML.py...
-Generating docs fo/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:241: warning: included file printMath.py is not found. Check your EXAMPLE_PATH
+Generating docs fo/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:231: warning: included file echoSBML.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:236: warning: included file getAllElementsWithNotes.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:238: warning: included file printAnnotation.py is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:241: warning: included file printMath.py is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:244: warning: included file printNotes.py is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:247: warning: included file printRegisteredPackages.py is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-python-example-files.txt:250: warning: included file printSBML.py is not found. Check your EXAMPLE_PATH
@@ -155166,7 +155202,7 @@
writing tag file...
Running plantuml with JAVA...
Running dot...
-Generating dot graphs using 5 parallel threads...
+Generating dot graphs using 7 parallel threads...
Running dot for graph 1/127
Running dot for graph 2/127
Running dot for graph 3/127
@@ -156768,7 +156804,7 @@
writing tag file...
Running plantuml with JAVA...
Running dot...
-Generating dot graphs using 5 parallel threads...
+Generating dot graphs using 7 parallel threads...
Running dot for graph 1/7
Running dot for graph 2/7
Running dot for graph 3/7
@@ -162313,10 +162349,6 @@
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:330: warning: included file translateMath.cpp is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:333: warning: included file unsetAnnotation.cpp is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:336: warning: included file unsetNotes.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:337: warning: included file validateSBML.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:339: warning: included file flattenModel.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:342: warning: included file spec_example1.cpp is not found. Check your EXAMPLE_PATH
-/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:345: warning: included file spec_example2.cpp is not found. Check your EXAMPLE_PATH
l/packages/qual/validator/QualSBMLError.h...
Preprocessing /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/validator/QualSBMLErrorTable.h...
Parsing file /build/reproducible-path/libsbml-5.20.4+dfsg/src/sbml/packages/qual/validator/QualSBMLErrorTable.h...
@@ -162411,7 +162443,11 @@
Generating docs for example translateMath.cpp...
Generating docs for example unsetAnnotation.cpp...
Generating docs for example unsetNotes.cpp...
-Generating docs for example va/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:348: warning: included file spec_example3.cpp is not found. Check your EXAMPLE_PATH
+Generating docs for example va/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:337: warning: included file validateSBML.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:339: warning: included file flattenModel.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:342: warning: included file spec_example1.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:345: warning: included file spec_example2.cpp is not found. Check your EXAMPLE_PATH
+/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:348: warning: included file spec_example3.cpp is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:351: warning: included file spec_example4.cpp is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:356: warning: included file fbc_example1.cpp is not found. Check your EXAMPLE_PATH
/build/reproducible-path/libsbml-5.20.4+dfsg/docs/src/libsbml-example-files.txt:360: warning: included file convertCobraToFbc.cpp is not found. Check your EXAMPLE_PATH
@@ -165000,7 +165036,7 @@
Generating Perl module output...
Running plantuml with JAVA...
Running dot...
-Generating dot graphs using 5 parallel threads...
+Generating dot graphs using 7 parallel threads...
Running dot for graph 1/1594
Running dot for graph 2/1594
Running dot for graph 3/1594
@@ -177587,7 +177623,7 @@
1: TestMultipleNamespaces
1: SBMLCompCheckConsistency
1: 100%: Checks: 14, Failures: 0, Errors: 0
- 1/65 Test #1: test_comp_extensions_run ...................... Passed 1.18 sec
+ 1/65 Test #1: test_comp_extensions_run ...................... Passed 1.91 sec
test 2
Start 2: test_comp_sbase_run
@@ -177608,7 +177644,7 @@
2: comp_sBaseRef
2: comp_submodel
2: 100%: Checks: 105, Failures: 0, Errors: 0
- 2/65 Test #2: test_comp_sbase_run ........................... Passed 1.92 sec
+ 2/65 Test #2: test_comp_sbase_run ........................... Passed 1.23 sec
test 3
Start 3: test_comp_util_run
@@ -177626,7 +177662,7 @@
3: SBMLCompFlatteningNewFlags
3: SBMLCompFlatteningConverterStripPackage
3: 100%: Checks: 365, Failures: 0, Errors: 0
- 3/65 Test #3: test_comp_util_run ............................ Passed 15.31 sec
+ 3/65 Test #3: test_comp_util_run ............................ Passed 22.70 sec
test 4
Start 4: test_comp_validator_run
@@ -177646,7 +177682,7 @@
4: 100%: Checks: 14, Failures: 0
4: Testing Unit Consistency Constraints (10500 - 10599).
4: 100%: Checks: 22, Failures: 0
- 4/65 Test #4: test_comp_validator_run ....................... Passed 2.36 sec
+ 4/65 Test #4: test_comp_validator_run ....................... Passed 2.95 sec
test 5
Start 5: test_sbml_package_fbc_run
@@ -177660,7 +177696,7 @@
5: ReadFbcExtension
5: FbcAssociation
5: 100%: Checks: 38, Failures: 0, Errors: 0
- 5/65 Test #5: test_sbml_package_fbc_run ..................... Passed 0.83 sec
+ 5/65 Test #5: test_sbml_package_fbc_run ..................... Passed 0.84 sec
test 6
Start 6: test_fbc_validator_run
@@ -177678,7 +177714,7 @@
6: 100%: Checks: 248, Failures: 0
6: Testing Id Consistency Constraints (10300 - 10399).
6: 100%: Checks: 13, Failures: 0
- 6/65 Test #6: test_fbc_validator_run ........................ Passed 2.09 sec
+ 6/65 Test #6: test_fbc_validator_run ........................ Passed 2.78 sec
test 7
Start 7: test_extension_package_groups_run
@@ -177692,7 +177728,7 @@
7: ReadGroupsExtension
7: GroupsModelPlugin
7: 100%: Checks: 25, Failures: 0, Errors: 0
- 7/65 Test #7: test_extension_package_groups_run ............. Passed 0.55 sec
+ 7/65 Test #7: test_extension_package_groups_run ............. Passed 0.35 sec
test 8
Start 8: test_groups_validator_run
@@ -177710,7 +177746,7 @@
8: 100%: Checks: 95, Failures: 0
8: Testing Id Consistency Constraints (10300 - 10399).
8: 100%: Checks: 11, Failures: 0
- 8/65 Test #8: test_groups_validator_run ..................... Passed 0.60 sec
+ 8/65 Test #8: test_groups_validator_run ..................... Passed 0.31 sec
test 9
Start 9: test_l3v2extendedmath_validator_run
@@ -177728,7 +177764,7 @@
9: 100%: Checks: 4, Failures: 0
9: Testing Unit Consistency Constraints (10500 - 10599).
9: 100%: Checks: 6, Failures: 0
- 9/65 Test #9: test_l3v2extendedmath_validator_run ........... Passed 0.20 sec
+ 9/65 Test #9: test_l3v2extendedmath_validator_run ........... Passed 0.11 sec
test 10
Start 10: test_extension_package_l3v2extendedmath_run
@@ -177742,7 +177778,7 @@
10: ReadL3v2EMExtension
10: ReadWriteL3v2Infix
10: 100%: Checks: 18, Failures: 0, Errors: 0
-10/65 Test #10: test_extension_package_l3v2extendedmath_run ... Passed 0.33 sec
+10/65 Test #10: test_extension_package_l3v2extendedmath_run ... Passed 0.21 sec
test 11
Start 11: test_sbml_package_layout_run
@@ -177771,7 +177807,7 @@
11: SBMLHandler
11: LayoutWriting
11: 100%: Checks: 288, Failures: 0, Errors: 0
-11/65 Test #11: test_sbml_package_layout_run .................. Passed 4.60 sec
+11/65 Test #11: test_sbml_package_layout_run .................. Passed 3.42 sec
test 12
Start 12: test_layout_validator_run
@@ -177789,7 +177825,7 @@
12: 100%: Checks: 223, Failures: 0
12: Testing Id Consistency Constraints (10300 - 10399).
12: 100%: Checks: 18, Failures: 0
-12/65 Test #12: test_layout_validator_run ..................... Passed 1.97 sec
+12/65 Test #12: test_layout_validator_run ..................... Passed 4.28 sec
test 13
Start 13: test_extension_package_qual_run
@@ -177803,7 +177839,7 @@
13: ReadQualExtension
13: GetAllElements
13: 100%: Checks: 20, Failures: 0, Errors: 0
-13/65 Test #13: test_extension_package_qual_run ............... Passed 0.53 sec
+13/65 Test #13: test_extension_package_qual_run ............... Passed 0.28 sec
test 14
Start 14: test_sbml_package_qual_run
@@ -177821,7 +177857,7 @@
14: ListOfFunctionTerms
14: CopyAndClone
14: 100%: Checks: 73, Failures: 0, Errors: 0
-14/65 Test #14: test_sbml_package_qual_run .................... Passed 1.33 sec
+14/65 Test #14: test_sbml_package_qual_run .................... Passed 0.60 sec
test 15
Start 15: test_qual_validator_run
@@ -177841,7 +177877,7 @@
15: 100%: Checks: 4, Failures: 0
15: Testing Math Consistency Constraints (10200 - 10299).
15: 100%: Checks: 3, Failures: 0
-15/65 Test #15: test_qual_validator_run ....................... Passed 0.72 sec
+15/65 Test #15: test_qual_validator_run ....................... Passed 0.86 sec
test 16
Start 16: test_sbml_package_render_run
@@ -177880,7 +177916,7 @@
16: RenderReading
16: RenderWriting
16: 100%: Checks: 136, Failures: 0, Errors: 0
-16/65 Test #16: test_sbml_package_render_run .................. Passed 3.54 sec
+16/65 Test #16: test_sbml_package_render_run .................. Passed 4.18 sec
test 17
Start 17: test_render_validator_run
@@ -177896,7 +177932,7 @@
17:
17: Testing General XML Consistency Constraints (20000 - 29999).
17: 100%: Checks: 111, Failures: 0
-17/65 Test #17: test_render_validator_run ..................... Passed 0.67 sec
+17/65 Test #17: test_render_validator_run ..................... Passed 0.81 sec
test 18
Start 18: test_sbml_annotation_run
@@ -177923,7 +177959,7 @@
18: RDFAnnotationV4
18: UnusualRDFAnnotation
18: 100%: Checks: 193, Failures: 0, Errors: 0
-18/65 Test #18: test_sbml_annotation_run ...................... Passed 3.33 sec
+18/65 Test #18: test_sbml_annotation_run ...................... Passed 3.46 sec
test 19
Start 19: test_sbml_conversion_run
@@ -177945,7 +177981,7 @@
19: RateOfConverter
19: SBMLRateRuleConverter
19: 100%: Checks: 188, Failures: 0, Errors: 0
-19/65 Test #19: test_sbml_conversion_run ...................... Passed 4.35 sec
+19/65 Test #19: test_sbml_conversion_run ...................... Passed 5.79 sec
test 20
Start 20: test_sbml_extension_run
@@ -177964,7 +178000,7 @@
20: SBMLExtensionRegistry
20: TestUnknownPackages
20: 100%: Checks: 30, Failures: 0, Errors: 0
-20/65 Test #20: test_sbml_extension_run ....................... Passed 0.60 sec
+20/65 Test #20: test_sbml_extension_run ....................... Passed 0.32 sec
test 21
Start 21: test_sbml_math_run
@@ -177992,7 +178028,7 @@
21: TestInferRnFunctions
21: TestDerivFunctions
21: 100%: Checks: 739, Failures: 0, Errors: 0
-21/65 Test #21: test_sbml_math_run ............................ Passed 10.94 sec
+21/65 Test #21: test_sbml_math_run ............................ Passed 6.91 sec
test 22
Start 22: test_sbml_sbml_run
@@ -178108,7 +178144,7 @@
22: SBaseIdName
22: Generic Attribute Functions
22: 100%: Checks: 1746, Failures: 0, Errors: 0
-22/65 Test #22: test_sbml_sbml_run ............................ Passed 28.60 sec
+22/65 Test #22: test_sbml_sbml_run ............................ Passed 22.15 sec
test 23
Start 23: test_sbml_units_run
@@ -178129,7 +178165,7 @@
23: UnitFormulaFormatter3
23: DerivedUnitDefinitionUndefined
23: 100%: Checks: 178, Failures: 0, Errors: 0
-23/65 Test #23: test_sbml_units_run ........................... Passed 4.18 sec
+23/65 Test #23: test_sbml_units_run ........................... Passed 7.49 sec
test 24
Start 24: test_sbml_util_run
@@ -178142,7 +178178,7 @@
24: Stack
24: StringBuffer
24: 100%: Checks: 57, Failures: 0, Errors: 0
-24/65 Test #24: test_sbml_util_run ............................ Passed 0.54 sec
+24/65 Test #24: test_sbml_util_run ............................ Passed 0.29 sec
test 25
Start 25: test_sbml_validator_run
@@ -178219,7 +178255,7 @@
25: 100%: Checks: 30, Failures: 0
25: Testing Modeling Practice Constraints (80000 - 89999).
25: 100%: Checks: 56, Failures: 0
-25/65 Test #25: test_sbml_validator_run ....................... Passed 26.34 sec
+25/65 Test #25: test_sbml_validator_run ....................... Passed 40.46 sec
test 26
Start 26: test_sbml_xml_run
@@ -178241,11 +178277,11 @@
26: XMLErrorLog
26: XMLInputStream
26: XMLOutputStream
-26:
+26:
26: XMLAttributesC
26: XMLExceptions
26: 100%: Checks: 131, Failures: 0, Errors: 0
-26/65 Test #26: test_sbml_xml_run ............................. Passed 2.50 sec
+26/65 Test #26: test_sbml_xml_run ............................. Passed 1.03 sec
test 27
Start 27: test_java_binding
@@ -178254,8 +178290,8 @@
27: Environment variables:
27: LD_LIBRARY_PATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/java:
27: Test timeout computed to be: 3000
-27: ...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
-27/65 Test #27: test_java_binding ............................. Passed 2.86 sec
+27: .................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+27/65 Test #27: test_java_binding ............................. Passed 6.07 sec
test 28
Start 28: test_java_printversion
@@ -178263,7 +178299,7 @@
28: Working Directory: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/java
28: Test timeout computed to be: 3000
28: .
-28/65 Test #28: test_java_printversion ........................ Passed 0.81 sec
+28/65 Test #28: test_java_printversion ........................ Passed 0.89 sec
test 29
Start 29: test_perl_binding
@@ -178314,9 +178350,9 @@
29: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/perl/t/07__TestModelHistory.t .......... ok
29: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/perl/t/07__TestRDFAnnotation2.t ........ ok
29: All tests successful.
-29: Files=41, Tests=3364, 20 wallclock secs ( 0.59 usr 0.20 sys + 12.70 cusr 2.46 csys = 15.95 CPU)
+29: Files=41, Tests=3364, 41 wallclock secs ( 1.90 usr 0.26 sys + 36.66 cusr 2.98 csys = 41.80 CPU)
29: Result: PASS
-29/65 Test #29: test_perl_binding ............................. Passed 20.74 sec
+29/65 Test #29: test_perl_binding ............................. Passed 41.11 sec
test 30
Start 30: test_python_binding
@@ -178329,13 +178365,13 @@
30: re_libxml = re.compile('^ USE_LIBXML \s* = \s* 1', re.X)
30: /build/reproducible-path/libsbml-5.20.4+dfsg/src/bindings/python/test/sbml/TestReadSBML.py:51: SyntaxWarning: invalid escape sequence '\s'
30: re_xerces = re.compile('^ USE_XERCES \s* = \s* 1', re.X)
-30: ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
-30: .........................................................................................................................................................................................................................................................................................................................................................
+30: ......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
+30: .....................................................................................................................................................................................................................................................................................................................................................................................
30: ----------------------------------------------------------------------
-30: Ran 1819 tests in 1.006s
+30: Ran 1819 tests in 2.150s
30:
30: OK
-30/65 Test #30: test_python_binding ........................... Passed 4.55 sec
+30/65 Test #30: test_python_binding ........................... Passed 7.76 sec
test 31
Start 31: test_python_printversion
@@ -178344,7 +178380,7 @@
31: Environment variables:
31: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
31: Test timeout computed to be: 3000
-31/65 Test #31: test_python_printversion ...................... Passed 0.45 sec
+31/65 Test #31: test_python_printversion ...................... Passed 0.77 sec
test 32
Start 32: test_python_addCVTerms
@@ -178353,7 +178389,7 @@
32: Environment variables:
32: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
32: Test timeout computed to be: 3000
-32/65 Test #32: test_python_addCVTerms ........................ Passed 0.45 sec
+32/65 Test #32: test_python_addCVTerms ........................ Passed 0.80 sec
test 33
Start 33: test_python_addingEvidenceCodes_1
@@ -178362,7 +178398,7 @@
33: Environment variables:
33: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
33: Test timeout computed to be: 3000
-33/65 Test #33: test_python_addingEvidenceCodes_1 ............. Passed 0.54 sec
+33/65 Test #33: test_python_addingEvidenceCodes_1 ............. Passed 0.79 sec
test 34
Start 34: test_python_addingEvidenceCodes_2
@@ -178371,7 +178407,7 @@
34: Environment variables:
34: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
34: Test timeout computed to be: 3000
-34/65 Test #34: test_python_addingEvidenceCodes_2 ............. Passed 0.46 sec
+34/65 Test #34: test_python_addingEvidenceCodes_2 ............. Passed 0.79 sec
test 35
Start 35: test_python_addModelHistory
@@ -178384,7 +178420,7 @@
35: Set created date: succeeded
35: Set modified date: succeeded
35: Set model history: unknown
-35/65 Test #35: test_python_addModelHistory ................... Passed 0.44 sec
+35/65 Test #35: test_python_addModelHistory ................... Passed 0.80 sec
test 36
Start 36: test_python_append_to_note
@@ -178401,7 +178437,7 @@
36: Body after change:
36:
36: Some notes
a new note
-36/65 Test #36: test_python_append_to_note .................... Passed 0.47 sec
+36/65 Test #36: test_python_append_to_note .................... Passed 0.81 sec
test 37
Start 37: test_python_appendAnnotation
@@ -178410,7 +178446,7 @@
37: Environment variables:
37: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
37: Test timeout computed to be: 3000
-37/65 Test #37: test_python_appendAnnotation .................. Passed 0.50 sec
+37/65 Test #37: test_python_appendAnnotation .................. Passed 0.79 sec
test 38
Start 38: test_python_convertSBML
@@ -178423,7 +178459,7 @@
38:
38: Conversion completed.
38:
-38/65 Test #38: test_python_convertSBML ....................... Passed 0.51 sec
+38/65 Test #38: test_python_convertSBML ....................... Passed 0.85 sec
test 39
Start 39: test_python_createExampleSBML
@@ -178441,7 +178477,7 @@
39: Notice: encountered 1 validation warning in model 'functionExample'.
39:
39: Wrote file 'functiondef.xml'
-39/65 Test #39: test_python_createExampleSBML ................. Passed 0.55 sec
+39/65 Test #39: test_python_createExampleSBML ................. Passed 0.91 sec
test 40
Start 40: test_python_createSimpleModel
@@ -178493,7 +178529,7 @@
40:
40:
40:
-40/65 Test #40: test_python_createSimpleModel ................. Passed 0.58 sec
+40/65 Test #40: test_python_createSimpleModel ................. Passed 0.80 sec
test 41
Start 41: test_python_echoSBML
@@ -178503,7 +178539,7 @@
41: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
41: Test timeout computed to be: 3000
41: [OK] Echoed /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml to echoSBML.out.xml
-41/65 Test #41: test_python_echoSBML .......................... Passed 0.49 sec
+41/65 Test #41: test_python_echoSBML .......................... Passed 0.79 sec
test 42
Start 42: test_python_evaluateCustomMath
@@ -178513,7 +178549,7 @@
42: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
42: Test timeout computed to be: 3000
42: 2*3+4 = 10.0
-42/65 Test #42: test_python_evaluateCustomMath ................ Passed 0.52 sec
+42/65 Test #42: test_python_evaluateCustomMath ................ Passed 0.78 sec
test 43
Start 43: test_python_getAllElementsWithNotes
@@ -178524,11 +178560,11 @@
43: Test timeout computed to be: 3000
43:
43: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-43: read time (ms): 2.477294921875
+43: read time (ms): 5.60498046875
43: searching ......:
-43: search time (ms): 0.4482421875
+43: search time (ms): 1.04736328125
43: elements with notes: 0
-43/65 Test #43: test_python_getAllElementsWithNotes ........... Passed 0.41 sec
+43/65 Test #43: test_python_getAllElementsWithNotes ........... Passed 0.78 sec
test 44
Start 44: test_python_inlineInitialAssignments
@@ -178537,7 +178573,7 @@
44: Environment variables:
44: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
44: Test timeout computed to be: 3000
-44/65 Test #44: test_python_inlineInitialAssignments .......... Passed 0.39 sec
+44/65 Test #44: test_python_inlineInitialAssignments .......... Passed 0.80 sec
test 45
Start 45: test_python_printAnnotation
@@ -178548,7 +178584,7 @@
45: Test timeout computed to be: 3000
45: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
45:
-45/65 Test #45: test_python_printAnnotation ................... Passed 0.54 sec
+45/65 Test #45: test_python_printAnnotation ................... Passed 0.79 sec
test 46
Start 46: test_python_printMath
@@ -178564,7 +178600,7 @@
46:
46:
46:
-46/65 Test #46: test_python_printMath ......................... Passed 0.53 sec
+46/65 Test #46: test_python_printMath ......................... Passed 0.80 sec
test 47
Start 47: test_python_printRegisteredPackages
@@ -178584,7 +178620,7 @@
47: qual
47:
47:
-47/65 Test #47: test_python_printRegisteredPackages ........... Passed 0.45 sec
+47/65 Test #47: test_python_printRegisteredPackages ........... Passed 0.77 sec
test 48
Start 48: test_python_printSBML
@@ -178610,7 +178646,7 @@
48: events: 0
48:
48:
-48/65 Test #48: test_python_printSBML ......................... Passed 0.40 sec
+48/65 Test #48: test_python_printSBML ......................... Passed 0.78 sec
test 49
Start 49: test_python_printsupported
@@ -178631,7 +178667,7 @@
49: SBML Level: 3 Version: 1
49: SBML Level: 3 Version: 2
49:
-49/65 Test #49: test_python_printsupported .................... Passed 0.44 sec
+49/65 Test #49: test_python_printsupported .................... Passed 0.77 sec
test 50
Start 50: test_python_printUnits
@@ -178651,7 +178687,7 @@
50: Reaction 1:
50: Kinetic Law: second (exponent = -1, multiplier = 1, scale = 0), mole (exponent = 1, multiplier = 1, scale = 0)
50: undeclared units: no
-50/65 Test #50: test_python_printUnits ........................ Passed 0.44 sec
+50/65 Test #50: test_python_printUnits ........................ Passed 0.81 sec
test 51
Start 51: test_python_promoteParameters
@@ -178661,7 +178697,7 @@
51: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
51: Test timeout computed to be: 3000
51: [OK] wrote promoteParameters.out.xml
-51/65 Test #51: test_python_promoteParameters ................. Passed 0.51 sec
+51/65 Test #51: test_python_promoteParameters ................. Passed 0.78 sec
test 52
Start 52: test_python_readSBML
@@ -178673,10 +178709,10 @@
52:
52: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
52: file size: 3930
-52: read time (ms): 2.918720245361328
+52: read time (ms): 7.426261901855469
52: validation error(s): 0
52:
-52/65 Test #52: test_python_readSBML .......................... Passed 0.43 sec
+52/65 Test #52: test_python_readSBML .......................... Passed 0.85 sec
test 53
Start 53: test_python_replaceOneFD
@@ -178685,7 +178721,7 @@
53: Environment variables:
53: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
53: Test timeout computed to be: 3000
-53/65 Test #53: test_python_replaceOneFD ...................... Passed 0.48 sec
+53/65 Test #53: test_python_replaceOneFD ...................... Passed 0.87 sec
test 54
Start 54: test_python_setIdFromNames
@@ -178696,11 +178732,11 @@
54: Test timeout computed to be: 3000
54:
54: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-54: read time (ms): 2.503662109375
-54: rename time (ms): 0.2978515625
-54: write time (ms): 2.321533203125
+54: read time (ms): 5.28466796875
+54: rename time (ms): 0.847412109375
+54: write time (ms): 3.05078125
54:
-54/65 Test #54: test_python_setIdFromNames .................... Passed 0.47 sec
+54/65 Test #54: test_python_setIdFromNames .................... Passed 0.83 sec
test 55
Start 55: test_python_setNamesFromIds
@@ -178711,11 +178747,11 @@
55: Test timeout computed to be: 3000
55:
55: filename: /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
-55: read time (ms): 2.49658203125
-55: rename time (ms): 0.697265625
-55: write time (ms): 2.32470703125
+55: read time (ms): 5.2421875
+55: rename time (ms): 1.405029296875
+55: write time (ms): 3.06005859375
55:
-55/65 Test #55: test_python_setNamesFromIds ................... Passed 0.48 sec
+55/65 Test #55: test_python_setNamesFromIds ................... Passed 0.80 sec
test 56
Start 56: test_python_unsetAnnotation
@@ -178724,7 +178760,7 @@
56: Environment variables:
56: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
56: Test timeout computed to be: 3000
-56/65 Test #56: test_python_unsetAnnotation ................... Passed 0.59 sec
+56/65 Test #56: test_python_unsetAnnotation ................... Passed 0.79 sec
test 57
Start 57: test_python_unsetNotes
@@ -178733,7 +178769,7 @@
57: Environment variables:
57: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
57: Test timeout computed to be: 3000
-57/65 Test #57: test_python_unsetNotes ........................ Passed 0.54 sec
+57/65 Test #57: test_python_unsetNotes ........................ Passed 0.79 sec
test 58
Start 58: test_python_validateSBML
@@ -178745,15 +178781,15 @@
58: ---------------------------------------------------------------------------
58: filename : /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/from-spec/level-3/enzymekinetics.xml
58: file size (byte) : 3930
-58: read time (ms) : 2.561092
-58: c-check time (ms) : 5.108356
+58: read time (ms) : 5.868673
+58: c-check time (ms) : 14.818907
58: validation error(s) : 0
58: (consistency error(s)): 0
58: validation warning(s) : 0
58: (consistency warning(s)): 0
58: ---------------------------------------------------------------------------
58: Validated 1 files, 1 valid files, 0 invalid files
-58/65 Test #58: test_python_validateSBML ...................... Passed 0.53 sec
+58/65 Test #58: test_python_validateSBML ...................... Passed 0.81 sec
test 59
Start 59: test_python_stringInput
@@ -178766,7 +178802,7 @@
59:
59:
59:
-59/65 Test #59: test_python_stringInput ....................... Passed 0.50 sec
+59/65 Test #59: test_python_stringInput ....................... Passed 0.79 sec
test 60
Start 60: test_python_stripPackage
@@ -178776,7 +178812,7 @@
60: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
60: Test timeout computed to be: 3000
60: [OK] stripped package 'fbc' from /build/reproducible-path/libsbml-5.20.4+dfsg/examples/sample-models/fbc/fbc_example1.xml to stripPackage.out.xml
-60/65 Test #60: test_python_stripPackage ...................... Passed 0.45 sec
+60/65 Test #60: test_python_stripPackage ...................... Passed 0.80 sec
test 61
Start 61: test_python_fbc_fbc_example1
@@ -178785,7 +178821,7 @@
61: Environment variables:
61: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
61: Test timeout computed to be: 3000
-61/65 Test #61: test_python_fbc_fbc_example1 .................. Passed 0.48 sec
+61/65 Test #61: test_python_fbc_fbc_example1 .................. Passed 0.80 sec
test 62
Start 62: test_python_groups_groups_example1
@@ -178794,7 +178830,7 @@
62: Environment variables:
62: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
62: Test timeout computed to be: 3000
-62/65 Test #62: test_python_groups_groups_example1 ............ Passed 0.55 sec
+62/65 Test #62: test_python_groups_groups_example1 ............ Passed 0.78 sec
test 63
Start 63: test_python_layout_example1_L3
@@ -178803,7 +178839,7 @@
63: Environment variables:
63: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
63: Test timeout computed to be: 3000
-63/65 Test #63: test_python_layout_example1_L3 ................ Passed 0.45 sec
+63/65 Test #63: test_python_layout_example1_L3 ................ Passed 0.81 sec
test 64
Start 64: test_python_layout_example1
@@ -178812,7 +178848,7 @@
64: Environment variables:
64: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
64: Test timeout computed to be: 3000
-64/65 Test #64: test_python_layout_example1 ................... Passed 0.53 sec
+64/65 Test #64: test_python_layout_example1 ................... Passed 0.84 sec
test 65
Start 65: test_python_qual_qual_example1
@@ -178821,11 +178857,11 @@
65: Environment variables:
65: PYTHONPATH=/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:/build/reproducible-path/libsbml-5.20.4+dfsg/build/src/bindings/python:
65: Test timeout computed to be: 3000
-65/65 Test #65: test_python_qual_qual_example1 ................ Passed 0.50 sec
+65/65 Test #65: test_python_qual_qual_example1 ................ Passed 0.78 sec
100% tests passed, 0 tests failed out of 65
-Total Test time (real) = 166.73 sec
+Total Test time (real) = 219.92 sec
make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.4+dfsg/build'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--builddir=build -O--buildsystem=cmake -O--no-parallel
@@ -179414,7 +179450,8 @@
mv /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/*/${pyv}/site-packages/* /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/${pyv}/dist-packages ; \
fi ; \
done
-+ [ -d /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/ ]
++ for pyv in python3.13
++ '[' -d /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/ ']'
+ mkdir -p /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
+ mv /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/libsbml /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/arm-linux-gnueabihf/python3.13/site-packages/libsbml.pth /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr/lib/python3.13/dist-packages
find /build/reproducible-path/libsbml-5.20.4+dfsg/debian/tmp/usr -type f -name "*.js" -delete
@@ -179445,15 +179482,17 @@
rmdir ${madir}/arm-linux-gnueabihf ; \
fi ; \
done
-+ + uniq
-sort
-+ find debian -name arm-linux-gnueabihf -type d
-+ [ -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf ]
-+ echo Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place
+++ find debian -name arm-linux-gnueabihf -type d
+++ sort
+++ uniq
++ for madir in `find debian -name arm-linux-gnueabihf -type d | sort | uniq`
++ '[' -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf ']'
++ echo 'Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place'
Moving contents of wrong directory debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf into place
+ mv debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/perl5 debian/tmp/usr/lib/arm-linux-gnueabihf
+ rmdir debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf
-+ [ -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/arm-linux-gnueabihf ]
++ for madir in `find debian -name arm-linux-gnueabihf -type d | sort | uniq`
++ '[' -d debian/tmp/usr/lib/arm-linux-gnueabihf/arm-linux-gnueabihf/arm-linux-gnueabihf ']'
find debian -type f -name "_form*" -delete
make[1]: Leaving directory '/build/reproducible-path/libsbml-5.20.4+dfsg'
dh_install -O--builddir=build -O--buildsystem=cmake -O--no-parallel
@@ -179506,8 +179545,6 @@
diversion by libc6 from: /lib/ld-linux-armhf.so.3
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged
-dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libsbml5t64/usr/lib/arm-linux-gnueabihf/libsbml.so.5.20.4 found in none of the libraries
-dpkg-shlibdeps: warning: debian/python3-sbml5/usr/lib/python3/dist-packages/libsbml/_libsbml.cpython-313-arm-linux-gnueabihf.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 from: /lib/ld-linux-armhf.so.3
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
@@ -179516,24 +179553,26 @@
diversion by libc6 from: /lib/ld-linux-armhf.so.3
dpkg-shlibdeps: warning: diversions involved - output may be incorrect
diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged
+dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libsbml5t64/usr/lib/arm-linux-gnueabihf/libsbml.so.5.20.4 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libsbml5-java/usr/lib/arm-linux-gnueabihf/libsbmlj.so found in none of the libraries
+dpkg-shlibdeps: warning: debian/python3-sbml5/usr/lib/python3/dist-packages/libsbml/_libsbml.cpython-313-arm-linux-gnueabihf.so contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_installdeb -O--builddir=build -O--buildsystem=cmake -O--no-parallel
dh_gencontrol -O--builddir=build -O--buildsystem=cmake -O--no-parallel
dh_md5sums -O--builddir=build -O--buildsystem=cmake -O--no-parallel
dh_builddeb -O--builddir=build -O--buildsystem=cmake -O--no-parallel
+dpkg-deb: building package 'libsbml5-java-dbgsym' in '../libsbml5-java-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
dpkg-deb: building package 'libsbml5-dev' in '../libsbml5-dev_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-java' in '../libsbml5-java_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'python3-sbml5' in '../python3-sbml5_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-octave' in '../libsbml5-octave_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-perl-doc' in '../libsbml5-perl-doc_5.20.4+dfsg-0.1_all.deb'.
dpkg-deb: building package 'libsbml5-examples' in '../libsbml5-examples_5.20.4+dfsg-0.1_all.deb'.
dpkg-deb: building package 'libsbml5-doc' in '../libsbml5-doc_5.20.4+dfsg-0.1_all.deb'.
-dpkg-deb: building package 'libsbml5-java-dbgsym' in '../libsbml5-java-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'python3-sbml5-dbgsym' in '../python3-sbml5-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-perl' in '../libsbml5-perl_5.20.4+dfsg-0.1_armhf.deb'.
dpkg-deb: building package 'libsbml5t64' in '../libsbml5t64_5.20.4+dfsg-0.1_armhf.deb'.
dpkg-deb: building package 'libsbml5t64-dbgsym' in '../libsbml5t64-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-perl' in '../libsbml5-perl_5.20.4+dfsg-0.1_armhf.deb'.
+dpkg-deb: building package 'libsbml5-java' in '../libsbml5-java_5.20.4+dfsg-0.1_armhf.deb'.
dpkg-deb: building package 'libsbml5-perl-dbgsym' in '../libsbml5-perl-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'python3-sbml5' in '../python3-sbml5_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'python3-sbml5-dbgsym' in '../python3-sbml5-dbgsym_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-octave' in '../libsbml5-octave_5.20.4+dfsg-0.1_armhf.deb'.
-dpkg-deb: building package 'libsbml5-perl-doc' in '../libsbml5-perl-doc_5.20.4+dfsg-0.1_all.deb'.
dpkg-deb: building package 'python3-sbml5-doc' in '../python3-sbml5-doc_5.20.4+dfsg-0.1_all.deb'.
dpkg-genbuildinfo --build=binary -O../libsbml_5.20.4+dfsg-0.1_armhf.buildinfo
dpkg-genchanges --build=binary -O../libsbml_5.20.4+dfsg-0.1_armhf.changes
@@ -179543,12 +179582,14 @@
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/28716/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
-I: removing directory /srv/workspace/pbuilder/6867 and its subdirectories
-I: Current time: Tue Jan 28 13:50:15 -12 2025
-I: pbuilder-time-stamp: 1738115415
+I: removing directory /srv/workspace/pbuilder/28716 and its subdirectories
+I: Current time: Thu Jan 30 06:23:51 +14 2025
+I: pbuilder-time-stamp: 1738167831