Diff of the two buildlogs:

--
--- b1/build.log	2023-04-26 08:16:10.558621868 +0000
+++ b2/build.log	2023-04-26 08:31:31.805777438 +0000
@@ -1,6 +1,6 @@
 I: pbuilder: network access will be disabled during build
-I: Current time: Tue Apr 25 19:34:12 -12 2023
-I: pbuilder-time-stamp: 1682494452
+I: Current time: Wed May 29 04:39:15 +14 2024
+I: pbuilder-time-stamp: 1716907155
 I: Building the build Environment
 I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
 I: copying local configuration
@@ -16,7 +16,7 @@
 I: copying [./primer3_2.6.1.orig.tar.gz]
 I: copying [./primer3_2.6.1-4.debian.tar.xz]
 I: Extracting source
-gpgv: Signature made Sun Nov 13 03:46:15 2022 -12
+gpgv: Signature made Mon Nov 14 05:46:15 2022 +14
 gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
 gpgv:                issuer "emollier@debian.org"
 gpgv: Can't check signature: No public key
@@ -31,135 +31,167 @@
 dpkg-source: info: applying buildflags.patch
 I: Not using root during the build.
 I: Installing the build-deps
-I: user script /srv/workspace/pbuilder/2179922/tmp/hooks/D02_print_environment starting
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/D01_modify_environment starting
+debug: Running on ionos15-amd64.
+I: Changing host+domainname to test build reproducibility
+I: Adding a custom variable just for the fun of it...
+I: Changing /bin/sh to bash
+'/bin/sh' -> '/bin/bash'
+lrwxrwxrwx 1 root root 9 May 29 04:39 /bin/sh -> /bin/bash
+I: Setting pbuilder2's login shell to /bin/bash
+I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/D01_modify_environment finished
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/D02_print_environment starting
 I: set
-  BUILDDIR='/build'
-  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
-  BUILDUSERNAME='pbuilder1'
-  BUILD_ARCH='amd64'
-  DEBIAN_FRONTEND='noninteractive'
-  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15'
-  DISTRIBUTION='bookworm'
-  HOME='/root'
-  HOST_ARCH='amd64'
+  BASH=/bin/sh
+  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
+  BASH_ALIASES=()
+  BASH_ARGC=()
+  BASH_ARGV=()
+  BASH_CMDS=()
+  BASH_LINENO=([0]="12" [1]="0")
+  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
+  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
+  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu")
+  BASH_VERSION='5.2.15(1)-release'
+  BUILDDIR=/build
+  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
+  BUILDUSERNAME=pbuilder2
+  BUILD_ARCH=amd64
+  DEBIAN_FRONTEND=noninteractive
+  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16'
+  DIRSTACK=()
+  DISTRIBUTION=bookworm
+  EUID=0
+  FUNCNAME=([0]="Echo" [1]="main")
+  GROUPS=()
+  HOME=/root
+  HOSTNAME=i-capture-the-hostname
+  HOSTTYPE=x86_64
+  HOST_ARCH=amd64
   IFS=' 	
   '
-  INVOCATION_ID='58dfc49ce9094b108628f9277b440a42'
-  LANG='C'
-  LANGUAGE='en_US:en'
-  LC_ALL='C'
-  MAIL='/var/mail/root'
-  OPTIND='1'
-  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
-  PBCURRENTCOMMANDLINEOPERATION='build'
-  PBUILDER_OPERATION='build'
-  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
-  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
-  PBUILDER_SYSCONFDIR='/etc'
-  PPID='2179922'
-  PS1='# '
-  PS2='> '
+  INVOCATION_ID=0aeff26ca5894840944250da56270582
+  LANG=C
+  LANGUAGE=et_EE:et
+  LC_ALL=C
+  MACHTYPE=x86_64-pc-linux-gnu
+  MAIL=/var/mail/root
+  OPTERR=1
+  OPTIND=1
+  OSTYPE=linux-gnu
+  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
+  PBCURRENTCOMMANDLINEOPERATION=build
+  PBUILDER_OPERATION=build
+  PBUILDER_PKGDATADIR=/usr/share/pbuilder
+  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
+  PBUILDER_SYSCONFDIR=/etc
+  PIPESTATUS=([0]="0")
+  POSIXLY_CORRECT=y
+  PPID=135713
   PS4='+ '
-  PWD='/'
-  SHELL='/bin/bash'
-  SHLVL='2'
-  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Guh3oWIR/pbuilderrc_YF5Q --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Guh3oWIR/b1 --logfile b1/build.log primer3_2.6.1-4.dsc'
-  SUDO_GID='110'
-  SUDO_UID='105'
-  SUDO_USER='jenkins'
-  TERM='unknown'
-  TZ='/usr/share/zoneinfo/Etc/GMT+12'
-  USER='root'
-  _='/usr/bin/systemd-run'
-  http_proxy='http://78.137.99.97:3128'
+  PWD=/
+  SHELL=/bin/bash
+  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
+  SHLVL=3
+  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Guh3oWIR/pbuilderrc_HMJ0 --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Guh3oWIR/b2 --logfile b2/build.log --extrapackages usrmerge primer3_2.6.1-4.dsc'
+  SUDO_GID=111
+  SUDO_UID=106
+  SUDO_USER=jenkins
+  TERM=unknown
+  TZ=/usr/share/zoneinfo/Etc/GMT-14
+  UID=0
+  USER=root
+  _='I: set'
+  http_proxy=http://85.184.249.68:3128
 I: uname -a
-  Linux ionos1-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux
+  Linux i-capture-the-hostname 6.1.0-0.deb11.5-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.12-1~bpo11+1 (2023-03-05) x86_64 GNU/Linux
 I: ls -l /bin
   total 5632
-  -rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bunzip2
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzcat
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzcmp -> bzdiff
-  -rwxr-xr-x 1 root root    2225 Sep 18  2022 bzdiff
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzegrep -> bzgrep
-  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzfgrep -> bzgrep
-  -rwxr-xr-x 1 root root    3775 Sep 18  2022 bzgrep
-  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzip2
-  -rwxr-xr-x 1 root root   14568 Sep 18  2022 bzip2recover
-  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzless -> bzmore
-  -rwxr-xr-x 1 root root    1297 Sep 18  2022 bzmore
-  -rwxr-xr-x 1 root root   44016 Sep 20  2022 cat
-  -rwxr-xr-x 1 root root   68656 Sep 20  2022 chgrp
-  -rwxr-xr-x 1 root root   64496 Sep 20  2022 chmod
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 chown
-  -rwxr-xr-x 1 root root  151152 Sep 20  2022 cp
-  -rwxr-xr-x 1 root root  125640 Jan  5 01:20 dash
-  -rwxr-xr-x 1 root root  121904 Sep 20  2022 date
-  -rwxr-xr-x 1 root root   89240 Sep 20  2022 dd
-  -rwxr-xr-x 1 root root  102200 Sep 20  2022 df
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 dir
-  -rwxr-xr-x 1 root root   88656 Mar 22 22:02 dmesg
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 dnsdomainname -> hostname
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 domainname -> hostname
-  -rwxr-xr-x 1 root root   43856 Sep 20  2022 echo
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 egrep
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 false
-  -rwxr-xr-x 1 root root      41 Jan 24 02:43 fgrep
-  -rwxr-xr-x 1 root root   85600 Mar 22 22:02 findmnt
-  -rwsr-xr-x 1 root root   35128 Mar 22 20:35 fusermount
-  -rwxr-xr-x 1 root root  203152 Jan 24 02:43 grep
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
-  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
-  -rwxr-xr-x 1 root root   98136 Apr  9  2022 gzip
-  -rwxr-xr-x 1 root root   22680 Dec 19 01:33 hostname
-  -rwxr-xr-x 1 root root   72824 Sep 20  2022 ln
-  -rwxr-xr-x 1 root root   53024 Mar 23 00:40 login
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 ls
-  -rwxr-xr-x 1 root root  207168 Mar 22 22:02 lsblk
-  -rwxr-xr-x 1 root root   97552 Sep 20  2022 mkdir
-  -rwxr-xr-x 1 root root   72912 Sep 20  2022 mknod
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 mktemp
-  -rwxr-xr-x 1 root root   59712 Mar 22 22:02 more
-  -rwsr-xr-x 1 root root   59704 Mar 22 22:02 mount
-  -rwxr-xr-x 1 root root   18744 Mar 22 22:02 mountpoint
-  -rwxr-xr-x 1 root root  142968 Sep 20  2022 mv
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 nisdomainname -> hostname
-  lrwxrwxrwx 1 root root      14 Apr  2 18:25 pidof -> /sbin/killall5
-  -rwxr-xr-x 1 root root   43952 Sep 20  2022 pwd
-  lrwxrwxrwx 1 root root       4 Apr 23 09:23 rbash -> bash
-  -rwxr-xr-x 1 root root   52112 Sep 20  2022 readlink
-  -rwxr-xr-x 1 root root   72752 Sep 20  2022 rm
-  -rwxr-xr-x 1 root root   56240 Sep 20  2022 rmdir
-  -rwxr-xr-x 1 root root   27560 Nov  2 04:31 run-parts
-  -rwxr-xr-x 1 root root  126424 Jan  5 07:55 sed
-  lrwxrwxrwx 1 root root       4 Jan  5 01:20 sh -> dash
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 sleep
-  -rwxr-xr-x 1 root root   85008 Sep 20  2022 stty
-  -rwsr-xr-x 1 root root   72000 Mar 22 22:02 su
-  -rwxr-xr-x 1 root root   39824 Sep 20  2022 sync
-  -rwxr-xr-x 1 root root  531984 Apr  6 02:25 tar
-  -rwxr-xr-x 1 root root   14520 Nov  2 04:31 tempfile
-  -rwxr-xr-x 1 root root  109616 Sep 20  2022 touch
-  -rwxr-xr-x 1 root root   35664 Sep 20  2022 true
-  -rwxr-xr-x 1 root root   14568 Mar 22 20:35 ulockmgr_server
-  -rwsr-xr-x 1 root root   35128 Mar 22 22:02 umount
-  -rwxr-xr-x 1 root root   43888 Sep 20  2022 uname
-  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
-  -rwxr-xr-x 1 root root  151344 Sep 20  2022 vdir
-  -rwxr-xr-x 1 root root   72024 Mar 22 22:02 wdctl
-  lrwxrwxrwx 1 root root       8 Dec 19 01:33 ypdomainname -> hostname
-  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
-  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
-  -rwxr-xr-x 1 root root    6460 Apr  9  2022 zdiff
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
-  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
-  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
-  -rwxr-xr-x 1 root root    8103 Apr  9  2022 zgrep
-  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
-  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
-  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
-I: user script /srv/workspace/pbuilder/2179922/tmp/hooks/D02_print_environment finished
+  -rwxr-xr-x 1 root root 1265648 Apr 24  2023 bash
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bunzip2
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzcat
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
+  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
+  -rwxr-xr-x 1 root root    4893 Nov 28  2021 bzexe
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
+  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
+  -rwxr-xr-x 3 root root   39224 Sep 19  2022 bzip2
+  -rwxr-xr-x 1 root root   14568 Sep 19  2022 bzip2recover
+  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
+  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
+  -rwxr-xr-x 1 root root   44016 Sep 21  2022 cat
+  -rwxr-xr-x 1 root root   68656 Sep 21  2022 chgrp
+  -rwxr-xr-x 1 root root   64496 Sep 21  2022 chmod
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 chown
+  -rwxr-xr-x 1 root root  151152 Sep 21  2022 cp
+  -rwxr-xr-x 1 root root  125640 Jan  6  2023 dash
+  -rwxr-xr-x 1 root root  121904 Sep 21  2022 date
+  -rwxr-xr-x 1 root root   89240 Sep 21  2022 dd
+  -rwxr-xr-x 1 root root  102200 Sep 21  2022 df
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 dir
+  -rwxr-xr-x 1 root root   88656 Mar 24  2023 dmesg
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 dnsdomainname -> hostname
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 domainname -> hostname
+  -rwxr-xr-x 1 root root   43856 Sep 21  2022 echo
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 egrep
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 false
+  -rwxr-xr-x 1 root root      41 Jan 25  2023 fgrep
+  -rwxr-xr-x 1 root root   85600 Mar 24  2023 findmnt
+  -rwsr-xr-x 1 root root   35128 Mar 23  2023 fusermount
+  -rwxr-xr-x 1 root root  203152 Jan 25  2023 grep
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
+  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
+  -rwxr-xr-x 1 root root   98136 Apr 10  2022 gzip
+  -rwxr-xr-x 1 root root   22680 Dec 20  2022 hostname
+  -rwxr-xr-x 1 root root   72824 Sep 21  2022 ln
+  -rwxr-xr-x 1 root root   53024 Mar 24  2023 login
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 ls
+  -rwxr-xr-x 1 root root  207168 Mar 24  2023 lsblk
+  -rwxr-xr-x 1 root root   97552 Sep 21  2022 mkdir
+  -rwxr-xr-x 1 root root   72912 Sep 21  2022 mknod
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 mktemp
+  -rwxr-xr-x 1 root root   59712 Mar 24  2023 more
+  -rwsr-xr-x 1 root root   59704 Mar 24  2023 mount
+  -rwxr-xr-x 1 root root   18744 Mar 24  2023 mountpoint
+  -rwxr-xr-x 1 root root  142968 Sep 21  2022 mv
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 nisdomainname -> hostname
+  lrwxrwxrwx 1 root root      14 Apr  3  2023 pidof -> /sbin/killall5
+  -rwxr-xr-x 1 root root   43952 Sep 21  2022 pwd
+  lrwxrwxrwx 1 root root       4 Apr 24  2023 rbash -> bash
+  -rwxr-xr-x 1 root root   52112 Sep 21  2022 readlink
+  -rwxr-xr-x 1 root root   72752 Sep 21  2022 rm
+  -rwxr-xr-x 1 root root   56240 Sep 21  2022 rmdir
+  -rwxr-xr-x 1 root root   27560 Nov  3  2022 run-parts
+  -rwxr-xr-x 1 root root  126424 Jan  6  2023 sed
+  lrwxrwxrwx 1 root root       9 May 29 04:39 sh -> /bin/bash
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 sleep
+  -rwxr-xr-x 1 root root   85008 Sep 21  2022 stty
+  -rwsr-xr-x 1 root root   72000 Mar 24  2023 su
+  -rwxr-xr-x 1 root root   39824 Sep 21  2022 sync
+  -rwxr-xr-x 1 root root  531984 Apr  7  2023 tar
+  -rwxr-xr-x 1 root root   14520 Nov  3  2022 tempfile
+  -rwxr-xr-x 1 root root  109616 Sep 21  2022 touch
+  -rwxr-xr-x 1 root root   35664 Sep 21  2022 true
+  -rwxr-xr-x 1 root root   14568 Mar 23  2023 ulockmgr_server
+  -rwsr-xr-x 1 root root   35128 Mar 24  2023 umount
+  -rwxr-xr-x 1 root root   43888 Sep 21  2022 uname
+  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
+  -rwxr-xr-x 1 root root  151344 Sep 21  2022 vdir
+  -rwxr-xr-x 1 root root   72024 Mar 24  2023 wdctl
+  lrwxrwxrwx 1 root root       8 Dec 20  2022 ypdomainname -> hostname
+  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
+  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
+  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
+  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
+  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
+  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
+  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
+  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
+  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/D02_print_environment finished
  -> Attempting to satisfy build-dependencies
  -> Creating pbuilder-satisfydepends-dummy package
 Package: pbuilder-satisfydepends-dummy
@@ -225,7 +257,7 @@
 Get: 28 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
 Get: 29 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
 Get: 30 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB]
-Fetched 18.7 MB in 1s (30.4 MB/s)
+Fetched 18.7 MB in 0s (91.4 MB/s)
 debconf: delaying package configuration, since apt-utils is not installed
 Selecting previously unselected package sensible-utils.
 (Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19596 files and directories currently installed.)
@@ -359,8 +391,19 @@
 Writing extended state information...
 Building tag database...
  -> Finished parsing the build-deps
+Reading package lists...
+Building dependency tree...
+Reading state information...
+usrmerge is already the newest version (35).
+0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
 I: Building the package
-I: Running cd /build/primer3-2.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../primer3_2.6.1-4_source.changes
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/A99_set_merged_usr starting
+Re-configuring usrmerge...
+removed '/etc/unsupported-skip-usrmerge-conversion'
+The system has been successfully converted.
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/A99_set_merged_usr finished
+hostname: Name or service not known
+I: Running cd /build/primer3-2.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../primer3_2.6.1-4_source.changes
 dpkg-buildpackage: info: source package primer3
 dpkg-buildpackage: info: source version 2.6.1-4
 dpkg-buildpackage: info: source distribution unstable
@@ -370,7 +413,7 @@
  debian/rules clean
 dh clean --sourcedirectory=src
    dh_auto_clean -O--sourcedirectory=src
-	cd src && make -j15 clean
+	cd src && make -j16 clean
 make[1]: Entering directory '/build/primer3-2.6.1/src'
 no windows
 rm -f *.o primer3_core ntdpal ntthal amplicon3_core oligotm long_seq_tm_test primer3_masker *~ libprimer3.a libdpal.a libthal.a libthalpara.a liboligotm.a libamplicontm.a libmasker.a libprimer3.so.1.0.0 libdpal.a.so.1.0.0 libthal.a.so.1.0.0 libthalpara.a.so.1.0.0 libamplicontm.so.1.0.0 liboligotm.so.1.2.0 libmasker.a.so.1.0.0 example.for example.rev example.int core ../*~
@@ -420,7 +463,7 @@
    debian/rules override_dh_auto_build
 make[1]: Entering directory '/build/primer3-2.6.1'
 dh_auto_build -- 'CPP=$(CXX)'
-	cd src && make -j15 "INSTALL=install --strip-program=true" CPP=\$\(CXX\)
+	cd src && make -j16 "INSTALL=install --strip-program=true" CPP=\$\(CXX\)
 make[2]: Entering directory '/build/primer3-2.6.1/src'
 no windows
 cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2  -Wl,-z,relro -Wl,-z,now -g primer3_boulder_main.c
@@ -438,6 +481,8 @@
 cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -g -Wall -Wl,-z,relro -Wl,-z,now -g -o ntdpal_main.o ntdpal_main.c
 cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o dpal.o dpal.c
 cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o thal_main.o thal_main.c
+cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -ffloat-store -Wl,-z,relro -Wl,-z,now -g -o thal.o thal.c
+ar rv libthalpara.a thal_parameters.o
 format_output.c: In function 'print_seq':
 format_output.c:418:61: warning: the comparison will always evaluate as 'true' for the address of 'rev' will never be NULL [-Waddress]
   418 |                 if (pa->pick_right_primer && (&retval->rev) != NULL
@@ -453,6 +498,9 @@
 libprimer3.h:927:15: note: 'fwd' declared here
   927 |   oligo_array fwd, intl, rev;
       |               ^~~
+ar: creating libthalpara.a
+a - thal_parameters.o
+ranlib libthalpara.a
 format_output.c: In function 'format_oligos':
 format_output.c:851:51: warning: the comparison will always evaluate as 'true' for the address of 'fwd' will never be NULL [-Waddress]
   851 |     if ((pa->pick_left_primer) && ((&retval->fwd) != NULL )
@@ -490,11 +538,6 @@
 libprimer3.h:927:26: note: 'rev' declared here
   927 |   oligo_array fwd, intl, rev;
       |                          ^~~
-cc -c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -ffloat-store -Wl,-z,relro -Wl,-z,now -g -o thal.o thal.c
-ar rv libthalpara.a thal_parameters.o
-ar: creating libthalpara.a
-a - thal_parameters.o
-ranlib libthalpara.a
 p3_seq_lib.c: In function 'read_and_create_seq_lib':
 p3_seq_lib.c:297:1: warning: pointer 'seq_id_plus' may be used after 'free' [-Wuse-after-free]
   297 | }
@@ -508,16 +551,20 @@
 a - oligotm.o
 ranlib liboligotm.a
 cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o oligotm oligotm_main.c liboligotm.a  -lm
+ar rv libmasker.a masker.o
+ar: creating libmasker.a
+a - masker.o
+ranlib libmasker.a
 ar rv libamplicontm.a amplicontm.o
 ar: creating libamplicontm.a
 a - amplicontm.o
 ranlib libamplicontm.a
 cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o amplicon3_core amplicontm_main.c libamplicontm.a  -lm
-ar rv libmasker.a masker.o
-ar: creating libmasker.a
-a - masker.o
-ranlib libmasker.a
 cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o ntdpal ntdpal_main.o dpal.o
+ar rv libdpal.a dpal_primer.o
+ar: creating libdpal.a
+a - dpal_primer.o
+ranlib libdpal.a
 In file included from /usr/include/string.h:535,
                  from thal.c:43:
 In function 'strcpy',
@@ -543,10 +590,6 @@
    79 |   return __builtin___strcpy_chk (__dest, __src, __glibc_objsize (__dest));
       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /usr/include/x86_64-linux-gnu/bits/string_fortified.h:79:10: note: in a call to built-in function '__builtin___memcpy_chk'
-ar rv libdpal.a dpal_primer.o
-ar: creating libdpal.a
-a - dpal_primer.o
-ranlib libdpal.a
 In function 'strcpy',
     inlined from 'safe_malloc' at thal.c:804:7,
     inlined from 'calc_bulge_internal.constprop' at thal.c:2000:19:
@@ -570,11 +613,11 @@
    79 |   return __builtin___strcpy_chk (__dest, __src, __glibc_objsize (__dest));
       |          ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 /usr/include/x86_64-linux-gnu/bits/string_fortified.h:79:10: note: in a call to built-in function '__builtin___memcpy_chk'
+cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o ntthal thal_main.o thal.o thal_parameters.o -lm
 ar rv libthal.a thal_primer.o
 ar: creating libthal.a
 a - thal_primer.o
 ranlib libthal.a
-cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/primer3-2.6.1=. -fstack-protector-strong -Wformat -Werror=format-security -g -Wall -O2 -Wl,-z,relro -Wl,-z,now -g -o ntthal thal_main.o thal.o thal_parameters.o -lm
 ar rv libprimer3.a libprimer3.o p3_seq_lib.o
 ar: creating libprimer3.a
 a - libprimer3.o
@@ -659,8 +702,8 @@
 
 a3test.pl: testing ../src/amplicon3_core
 
-START, Tue Apr 25 19:37:28 2023
-plain_WNT9B...1s [OK]
+START, Wed May 29 04:39:57 2024
+plain_WNT9B...0s [OK]
 plain_TBX18...0s [OK]
 plain_RYK...0s [OK]
 plain_WNT2...0s [OK]
@@ -692,7 +735,7 @@
 classic_WNT2...0s [OK]
 classic_ROCK2...0s [OK]
 classic_SFRP3...0s [OK]
-classic_IFT20...1s [OK]
+classic_IFT20...0s [OK]
 classic_DVL1...0s [OK]
 classic_IFT88...0s [OK]
 classic_FZD2...0s [OK]
@@ -705,9 +748,9 @@
 heli_WNT2...0s [OK]
 heli_ROCK2...0s [OK]
 heli_SFRP3...0s [OK]
-heli_IFT20...0s [OK]
+heli_IFT20...1s [OK]
 heli_DVL1...0s [OK]
-heli_IFT88...1s [OK]
+heli_IFT88...0s [OK]
 heli_FZD2...0s [OK]
 heli_GAPDH...0s [OK]
 heli_WNT1...0s [OK]
@@ -725,7 +768,7 @@
 long_GAPDH...0s [OK]
 long_WNT1...0s [OK]
 long_MYH6...0s [OK]
-optimal_WNT9B...1s [OK]
+optimal_WNT9B...0s [OK]
 optimal_TBX18...0s [OK]
 optimal_RYK...0s [OK]
 optimal_WNT2...0s [OK]
@@ -759,15 +802,15 @@
 no_dmso_SFRP3...0s [OK]
 no_dmso_IFT20...0s [OK]
 no_dmso_DVL1...0s [OK]
-no_dmso_IFT88...1s [OK]
+no_dmso_IFT88...0s [OK]
 no_dmso_FZD2...0s [OK]
 no_dmso_GAPDH...0s [OK]
 no_dmso_WNT1...0s [OK]
 no_dmso_MYH6...0s [OK]
 
-Tests in a3test.pl ran for 5 s (0.0833333333333333 min)
+Tests in a3test.pl ran for 1 s (0.0166666666666667 min)
 
-DONE Tue Apr 25 19:37:33 2023 Passed all tests - [OK]
+DONE Wed May 29 04:39:58 2024 Passed all tests - [OK]
 
 
 echo; echo; echo 'TESTING primer3_core'; echo; perl p3test.pl 
@@ -784,7 +827,7 @@
 
 p3test.pl: testing ../src/primer3_core
 
-START, Tue Apr 25 19:37:33 2023
+START, Wed May 29 04:39:58 2024
 
 testing fatal errors...
   ./primer_global_err/annealing_temp_salt
@@ -894,49 +937,49 @@
   ./primer_global_err/zero_min_size
   ./primer_global_err/zero_num_return
 [OK]
-primer_must_use_th...1s [OK]
+primer_must_use_th...0s [OK]
 primer_sec_struct_dpal...0s [OK]
-primer_task_th...3s [OK]
+primer_task_th...1s [OK]
 primer_thal_args...1s [OK]
-primer_thal_max_seq_error...2s [OK]
+primer_thal_max_seq_error...0s [OK]
 primer_first_base_index...0s [OK]
-primer_must_match...0s [OK]
+primer_must_match...1s [OK]
 test_compl_error...0s [OK]
-test_left_to_right_of_right...1s [OK]
+test_left_to_right_of_right...0s [OK]
 dv_conc_vs_dntp_conc...0s [OK]
 primer_boundary...0s [OK]
 primer_boundary1...0s [OK]
 primer_boundary_formatted...0s [OK]
 primer_boundary1_formatted...0s [OK]
-primer3_v1_1_4_default_settings...1s [OK]
+primer3_v1_1_4_default_settings...0s [OK]
 primer3web_v0_4_0_default_settings...0s [OK]
-primer3web_v3_0_0_default_settings...6s [OK]
+primer3web_v3_0_0_default_settings...2s [OK]
 primer3web_v4_0_0_default_settings...0s [OK]
 primer_internal...0s [OK]
 primer_internal1...0s [OK]
-primer_internal_formatted...1s [OK]
+primer_internal_formatted...0s [OK]
 primer_internal1_formatted...0s [OK]
 primer_ok_regions...0s [OK]
 primer_ok_regions_formatted...0s [OK]
-primer_ok_regions2...26s [OK]
+primer_ok_regions2...11s [OK]
 primer_tm_lc_masking...0s [OK]
 primer_tm_lc_masking_formatted...0s [OK]
-primer_start_codon...1s [OK]
+primer_start_codon...0s [OK]
 primer_task...0s [OK]
 primer_task_formatted...0s [OK]
 primer_renewed_tasks...0s [OK]
-primer_dmso_formamide...1s [OK]
+primer_dmso_formamide...0s [OK]
 primer_new_tasks...1s [OK]
-primer_new_tasks_formatted...1s [OK]
-primer_internal_position...1s [OK]
-primer_annealing_temp...0s [OK]
-primer_windows_newlines...4s [OK]
-primer_must_overlap_point...1s [OK]
+primer_new_tasks_formatted...0s [OK]
+primer_internal_position...0s [OK]
+primer_annealing_temp...1s [OK]
+primer_windows_newlines...1s [OK]
+primer_must_overlap_point...0s [OK]
 primer_overlap_junction...0s [OK]
 primer_all_settingsfiles...0s [OK]
 primer_high_tm_load_set...0s [OK]
-primer_high_gc_load_set...0s [OK]
-primer_gc_end...1s [OK]
+primer_high_gc_load_set...1s [OK]
+primer_gc_end...0s [OK]
 primer_check...0s [OK]
 primer_must_use...0s [OK]
 primer_must_use_formatted...0s [OK]
@@ -944,47 +987,47 @@
 primer_end_pathology...0s [OK]
 primer_num_best...0s [OK]
 primer_quality_boundary...0s [OK]
-primer...5s [OK]
+primer...1s [OK]
 primer_list_files...[OK]
 primer1...0s [OK]
 primer1_list_files...[OK]
 primer_mispriming...1s [OK]
-primer_mispriming_formatted...2s [OK]
+primer_mispriming_formatted...0s [OK]
 primer_mispriming_boundary1...0s [OK]
 primer_mispriming_boundary1_formatted...0s [OK]
 primer_mispriming_boundary2...0s [OK]
 primer_mispriming_boundary2_formatted...0s [OK]
 primer_mispriming_long_lib...0s [OK]
-primer_rat...2s [OK]
-primer_human...3s [OK]
+primer_rat...1s [OK]
+primer_human...1s [OK]
 long_seq...1s [OK]
-primer_position_penalty...2s [OK]
-primer_position_penalty_formatted...3s [OK]
+primer_position_penalty...1s [OK]
+primer_position_penalty_formatted...1s [OK]
 p3-tmpl-mispriming...0s [OK]
 primer_poly_x...0s [OK]
 primer_three_prime_distance...0s [OK]
-primer_obj_fn...7s [OK]
+primer_obj_fn...3s [OK]
 p3_3_prime_n...0s [OK]
-primer_masker...8s [OK]
-primer_masker_formatted...9s [OK]
+primer_masker...3s [OK]
+primer_masker_formatted...3s [OK]
 primer_overhang...0s [OK]
-primer_overhang_th...51s [OK]
-primer_mispriming_th...37s [OK]
-th-w-other-tasks...43s [OK]
+primer_overhang_th...18s [OK]
+primer_mispriming_th...15s [OK]
+th-w-other-tasks...21s [OK]
 th-w-other-tasks_list_files...[OK]
-primer_new_tasks_th...65s [OK]
-primer_sec_struct_thal...50s [OK]
-primer_thermod_align...160s [OK]
-primer_thermod_align_formatted...188s [OK]
-primer1_th...481s [OK]
+primer_new_tasks_th...31s [OK]
+primer_sec_struct_thal...19s [OK]
+primer_thermod_align...134s [OK]
+primer_thermod_align_formatted...99s [OK]
+primer1_th...176s [OK]
 primer1_th_list_files...[OK]
 primer_lib_amb_codes...
 NOTE: this test takes _much_ longer than the others (5 to 20 minutes or more).
-starting primer_lib_amb_codes at Tue Apr 25 19:57:07 2023...707s [OK]
+starting primer_lib_amb_codes at Wed May 29 04:49:08 2024...185s [OK]
 
-Tests in p3test.pl ran for 1881 s (31.35 min)
+Tests in p3test.pl ran for 735 s (12.25 min)
 
-DONE Tue Apr 25 20:08:54 2023 Passed all tests - [OK]
+DONE Wed May 29 04:52:13 2024 Passed all tests - [OK]
 
 
 echo; echo; echo "Testing completed. You must check the test output for the string FAILED"; echo; echo;
@@ -996,7 +1039,7 @@
 make[2]: Leaving directory '/build/primer3-2.6.1/test'
 dh clean --sourcedirectory=test
    dh_auto_clean -O--sourcedirectory=test
-	cd test && make -j15 clean
+	cd test && make -j16 clean
 make[2]: Entering directory '/build/primer3-2.6.1/test'
 echo; echo; echo 'CLEAN UP TEST DIRECTORIES'; echo; echo;
 
@@ -1039,7 +1082,7 @@
    debian/rules override_dh_auto_install
 make[1]: Entering directory '/build/primer3-2.6.1'
 dh_auto_install -- PREFIX=debian/primer3/usr
-	cd src && make -j15 install DESTDIR=/build/primer3-2.6.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=debian/primer3/usr
+	cd src && make -j16 install DESTDIR=/build/primer3-2.6.1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=debian/primer3/usr
 make[2]: Entering directory '/build/primer3-2.6.1/src'
 no windows
 install -d "debian/primer3/usr/bin"
@@ -1083,9 +1126,9 @@
    dh_gencontrol -O--sourcedirectory=src
    dh_md5sums -O--sourcedirectory=src
    dh_builddeb -O--sourcedirectory=src
+dpkg-deb: building package 'primer3' in '../primer3_2.6.1-4_amd64.deb'.
 dpkg-deb: building package 'primer3-dbgsym' in '../primer3-dbgsym_2.6.1-4_amd64.deb'.
 dpkg-deb: building package 'primer3-examples' in '../primer3-examples_2.6.1-4_all.deb'.
-dpkg-deb: building package 'primer3' in '../primer3_2.6.1-4_amd64.deb'.
  dpkg-genbuildinfo --build=binary -O../primer3_2.6.1-4_amd64.buildinfo
  dpkg-genchanges --build=binary -O../primer3_2.6.1-4_amd64.changes
 dpkg-genchanges: info: binary-only upload (no source code included)
@@ -1093,12 +1136,14 @@
 dpkg-buildpackage: info: binary-only upload (no source included)
 dpkg-genchanges: info: not including original source code in upload
 I: copying local configuration
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/B01_cleanup starting
+I: user script /srv/workspace/pbuilder/135713/tmp/hooks/B01_cleanup finished
 I: unmounting dev/ptmx filesystem
 I: unmounting dev/pts filesystem
 I: unmounting dev/shm filesystem
 I: unmounting proc filesystem
 I: unmounting sys filesystem
 I: cleaning the build env 
-I: removing directory /srv/workspace/pbuilder/2179922 and its subdirectories
-I: Current time: Tue Apr 25 20:16:10 -12 2023
-I: pbuilder-time-stamp: 1682496970
+I: removing directory /srv/workspace/pbuilder/135713 and its subdirectories
+I: Current time: Wed May 29 04:54:33 +14 2024
+I: pbuilder-time-stamp: 1716908073