Diff of the two buildlogs: -- --- b1/build.log 2025-03-08 03:07:03.597230162 +0000 +++ b2/build.log 2025-03-08 03:09:04.207818544 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Apr 9 21:28:48 -12 2026 -I: pbuilder-time-stamp: 1775813328 +I: Current time: Sat Mar 8 17:07:06 +14 2025 +I: pbuilder-time-stamp: 1741403226 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,51 +25,83 @@ dpkg-source: info: applying lapacke.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2130812/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 8 03:07 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='ffd74aae637945ecb3d2b49a5e0f7607' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2130812' - PS1='# ' - PS2='> ' + INVOCATION_ID=edece0fcb2ea4cff8181d8b403d33a68 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=982857 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.MXX0pK8t/pbuilderrc_YRI5 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.MXX0pK8t/b1 --logfile b1/build.log eigensoft_8.0.0+dfsg-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.MXX0pK8t/pbuilderrc_xBlN --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.MXX0pK8t/b2 --logfile b2/build.log eigensoft_8.0.0+dfsg-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2130812/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -162,7 +194,7 @@ Get: 45 http://deb.debian.org/debian unstable/main amd64 liblapacke amd64 3.12.1-2 [381 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libtmglib-dev amd64 3.12.1-2 [129 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 liblapacke-dev amd64 3.12.1-2 [381 kB] -Fetched 45.1 MB in 2s (19.2 MB/s) +Fetched 45.1 MB in 4s (10.5 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19783 files and directories currently installed.) @@ -371,7 +403,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/eigensoft-8.0.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../eigensoft_8.0.0+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/eigensoft-8.0.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../eigensoft_8.0.0+dfsg-2_source.changes dpkg-buildpackage: info: source package eigensoft dpkg-buildpackage: info: source version 8.0.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -780,51 +816,51 @@ chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/df/73dd11b517ca23b1bf8f835b17fc82dae2e2ad.debug strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/lib/eigensoft/smarteigenstrat objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/df/73dd11b517ca23b1bf8f835b17fc82dae2e2ad.debug debian/eigensoft/usr/lib/eigensoft/smarteigenstrat - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57 - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/mergeit debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/mergeit - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug debian/eigensoft/usr/bin/mergeit - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30 - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/eigenstratQTL debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/eigenstratQTL - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug debian/eigensoft/usr/bin/eigenstratQTL - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/twstats debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/twstats - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug debian/eigensoft/usr/bin/twstats install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/baseprog debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/32/9a8b59b9d23f230b9de45c3cd3f4fa68d23882.debug chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/32/9a8b59b9d23f230b9de45c3cd3f4fa68d23882.debug strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/baseprog objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/32/9a8b59b9d23f230b9de45c3cd3f4fa68d23882.debug debian/eigensoft/usr/bin/baseprog - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37 - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/convertf debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/convertf - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug debian/eigensoft/usr/bin/convertf install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/f4 objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/eigenstrat debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/f4/83a2eb77fc45b9a8e563ec2c2247ea2be0a910.debug chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/f4/83a2eb77fc45b9a8e563ec2c2247ea2be0a910.debug strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/eigenstrat objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/f4/83a2eb77fc45b9a8e563ec2c2247ea2be0a910.debug debian/eigensoft/usr/bin/eigenstrat - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/smartrel debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/smartrel - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug debian/eigensoft/usr/bin/smartrel - install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a - objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/pcatoy debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug - chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug - strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/pcatoy - objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug debian/eigensoft/usr/bin/pcatoy + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37 + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/convertf debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/convertf + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/37/9ab3d2cd2c8114c89b3646ac7b8f5faee89192.debug debian/eigensoft/usr/bin/convertf + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57 + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/mergeit debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/mergeit + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/57/5f3167b7b1591fb7c98c8d058bd5944a884788.debug debian/eigensoft/usr/bin/mergeit install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/ba objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/pca debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/ba/7e8ca4c2bdf40212db0d873c956b79ec1984f7.debug chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/ba/7e8ca4c2bdf40212db0d873c956b79ec1984f7.debug strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/pca objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/ba/7e8ca4c2bdf40212db0d873c956b79ec1984f7.debug debian/eigensoft/usr/bin/pca + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/pcatoy debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/pcatoy + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/4a/d8d32085af1499b6b6cb22dcb13e0d25d774f0.debug debian/eigensoft/usr/bin/pcatoy + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/smartrel debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/smartrel + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/0d/d0d63f92d0ec7662c93b24b83b2047793bdf47.debug debian/eigensoft/usr/bin/smartrel + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/twstats debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/twstats + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/3c/8b9fa2c24f61bfaf8d9f368ced17d97090d029.debug debian/eigensoft/usr/bin/twstats + install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30 + objcopy --only-keep-debug --compress-debug-sections debian/eigensoft/usr/bin/eigenstratQTL debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug + chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug + strip --remove-section=.comment --remove-section=.note debian/eigensoft/usr/bin/eigenstratQTL + objcopy --add-gnu-debuglink debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.build-id/30/a98f430d949bafa5daa24f0cde46075cc2fde5.debug debian/eigensoft/usr/bin/eigenstratQTL install -m0755 -d debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/eigensoft/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/eigensoft/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/eigensoft/usr/lib/debug/.dwz @@ -836,7 +872,7 @@ rm -f debian/eigensoft/DEBIAN/shlibs dh_shlibdeps -a install -m0755 -d debian/eigensoft/DEBIAN - dpkg-shlibdeps -Tdebian/eigensoft.substvars debian/eigensoft/usr/lib/eigensoft/smartpca debian/eigensoft/usr/lib/eigensoft/smarteigenstrat debian/eigensoft/usr/bin/mergeit debian/eigensoft/usr/bin/eigenstratQTL debian/eigensoft/usr/bin/twstats debian/eigensoft/usr/bin/baseprog debian/eigensoft/usr/bin/convertf debian/eigensoft/usr/bin/eigenstrat debian/eigensoft/usr/bin/smartrel debian/eigensoft/usr/bin/pcatoy debian/eigensoft/usr/bin/pca + dpkg-shlibdeps -Tdebian/eigensoft.substvars debian/eigensoft/usr/lib/eigensoft/smartpca debian/eigensoft/usr/lib/eigensoft/smarteigenstrat debian/eigensoft/usr/bin/baseprog debian/eigensoft/usr/bin/eigenstrat debian/eigensoft/usr/bin/convertf debian/eigensoft/usr/bin/mergeit debian/eigensoft/usr/bin/pca debian/eigensoft/usr/bin/pcatoy debian/eigensoft/usr/bin/smartrel debian/eigensoft/usr/bin/twstats debian/eigensoft/usr/bin/eigenstratQTL dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/eigensoft/usr/lib/eigensoft/smartpca was not linked against libblas.so.3 (it uses none of the library's symbols) dh_installdeb install -m0755 -d debian/eigensoft/DEBIAN @@ -857,8 +893,8 @@ cd debian/.debhelper/eigensoft/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/eigensoft/dbgsym-root/DEBIAN/md5sums dh_builddeb - dpkg-deb --root-owner-group --build debian/eigensoft .. dpkg-deb --root-owner-group --build debian/.debhelper/eigensoft/dbgsym-root .. + dpkg-deb --root-owner-group --build debian/eigensoft .. dpkg-deb: building package 'eigensoft' in '../eigensoft_8.0.0+dfsg-2_amd64.deb'. dpkg-deb: building package 'eigensoft-dbgsym' in '../eigensoft-dbgsym_8.0.0+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../eigensoft_8.0.0+dfsg-2_amd64.buildinfo @@ -868,12 +904,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/982857/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2130812 and its subdirectories -I: Current time: Thu Apr 9 21:30:02 -12 2026 -I: pbuilder-time-stamp: 1775813402 +I: removing directory /srv/workspace/pbuilder/982857 and its subdirectories +I: Current time: Sat Mar 8 17:09:03 +14 2025 +I: pbuilder-time-stamp: 1741403343