Diff of the two buildlogs: -- --- b1/build.log 2025-03-07 13:43:26.470848252 +0000 +++ b2/build.log 2025-03-07 15:48:42.656921491 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Apr 9 06:25:04 -12 2026 -I: pbuilder-time-stamp: 1775759104 +I: Current time: Sat Mar 8 03:43:33 +14 2025 +I: pbuilder-time-stamp: 1741355013 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -24,51 +24,83 @@ dpkg-source: info: applying avoid-gcc-crash.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/4191482/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/D01_modify_environment starting +debug: Running on infom01-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 7 13:43 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='f16a6bb82c8e469b875e375626db8891' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='4191482' - PS1='# ' - PS2='> ' + INVOCATION_ID=2844078334814d5a83f64ee4191c40ac + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3069929 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oeUFcKln/pbuilderrc_vSjD --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oeUFcKln/b1 --logfile b1/build.log ncbi-igblast_1.20.0-2.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.oeUFcKln/pbuilderrc_LIaN --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.oeUFcKln/b2 --logfile b2/build.log ncbi-igblast_1.20.0-2.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom02-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/4191482/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -163,7 +195,7 @@ Get: 47 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libncbi-vdb-dev amd64 3.0.9+dfsg-2 [1612 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 time amd64 1.9-0.2 [50.8 kB] -Fetched 29.9 MB in 1s (52.4 MB/s) +Fetched 29.9 MB in 1s (34.7 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19783 files and directories currently installed.) @@ -374,7 +406,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-2_source.changes +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-2_source.changes dpkg-buildpackage: info: source package ncbi-igblast dpkg-buildpackage: info: source version 1.20.0-2 dpkg-buildpackage: info: source distribution unstable @@ -402,74 +438,74 @@ done ) ; \ ) ; \ done -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: 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directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory make[1]: [debian/rules:39: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile c++/GCC* rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -978,7 +1014,7 @@ checking for libungif... no checking for libXpm... no checking for freetype-config... no -./src/build-system/configure: line 29815: cd: /nonexistent/first-build: No such file or directory +/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/configure: line 29815: cd: /nonexistent/second-build: No such file or directory checking for libftgl... no checking for libmagic... no checking for libmimetic... no @@ -1035,221 +1071,221 @@ configure: ...done configure: updating cache config.cache configure: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/config.status -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blastdb/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/grpc_integration/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/db/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/db/sqlite/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/ncbicfg.c -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/Makefile.precompile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/test/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/demo/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/unit_test/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/demo/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/blastdb_format/unit_test/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/blastdb_format/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/unit_test/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io/Makefile config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/unit_test/Makefile config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer/Makefile -config.status: creating 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/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/jsonwrapp/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile -config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast/Makefile +config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blastdb/Makefile config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/./Makefile config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc/common/ncbi_build_ver.h config.status: creating /build/reproducible-path/ncbi-igblast-1.20.0/c++/include/common/ncbi_revision.h @@ -1266,7 +1302,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c. gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DNCBI_APP_BUILT_AS=run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o gcc -Wl,-z,relro run_with_lock.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lm -lpthread -o run_with_lock -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/run_with_lock make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' @@ -5511,7 +5547,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/ncbi_pool_balancer.cpp -o ncbi_pool_balancer.o /bin/rm -f libxncbi.a .libxncbi.a.stamp ar cr libxncbi.a ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o ncbi_fast.o ncbi_dbsvcmapper.o ncbi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxncbi.a /bin/ln -f .xncbi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xncbi.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib' @@ -5702,7 +5738,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.a .libtest_mt.a.stamp ar cr libtest_mt.a test_mt.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libtest_mt.a /bin/ln -f .test_mt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.test_mt.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib' @@ -8919,7 +8955,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/crc32_sse.cpp -o crc32_sse.o /bin/rm -f libxutil.a .libxutil.a.stamp ar cr libxutil.a random_gen.o utf8.o checksum.o checksum_cityhash.o checksum_farmhash.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o cache_async.o multipattern_search.o crc32_sse.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxutil.a /bin/ln -f .xutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xutil.dep make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util' @@ -8994,7 +9030,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -DHAVE_CONFIG_H -DPCRE_NO_UTF16 -DPCRE_NO_UTF32 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcreposix.c -o pcreposix.o /bin/rm -f libregexp.a .libregexp.a.stamp ar cr libregexp.a pcre_byte_order.o pcre_chartables.o pcre_compile.o pcre_config.o pcre_dfa_exec.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_string_utils.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o pcreposix.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libregexp.a /bin/ln -f .regexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.regexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' @@ -9005,7 +9041,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcretest.c -o pcretest.o /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcre_printint.c -o pcre_printint.o /usr/bin/g++ -std=gnu++17 -msse4.2 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 pcretest.o pcre_printint.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lregexp -o test_pcre -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/test_pcre make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' @@ -9309,7 +9345,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/convert_dates_iso8601.cpp -o convert_dates_iso8601.o /bin/rm -f libxregexp.a .libxregexp.a.stamp ar cr libxregexp.a regexp.o arg_regexp.o mask_regexp.o convert_dates_iso8601.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxregexp.a /bin/ln -f .xregexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xregexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/xregexp' @@ -9388,7 +9424,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o /bin/rm -f libxregexp_template_tester.a .libxregexp_template_tester.a.stamp ar cr libxregexp_template_tester.a regexp_template_tester.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxregexp_template_tester.a /bin/ln -f .xregexp_template_tester.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xregexp_template_tester.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/xregexp' @@ -13966,7 +14002,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++17 -msse4.2 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lxutil -lxncbi -lxregexp -lregexp -lm -lpthread -o project_tree_builder -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/project_tree_builder make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' @@ -17533,7 +17569,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/rpcbase.cpp -o rpcbase.o /bin/rm -f libxser.a .libxser.a.stamp ar cr libxser.a hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxser.a /bin/ln -f .xser.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial' @@ -21987,7 +22023,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -msse4.2 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' @@ -22064,6 +22100,7 @@ /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/general TMPL=general flag-stamps make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' +/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/run_with_lock: Unable to rename log file make_general.log.new: No such file or directory. make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' cd objects/genomecoll/ && /usr/bin/make sources make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll' @@ -22081,7 +22118,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/new_module.sh gencoll_client all Waiting for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock. -Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 299909 (make_asn) +Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 3135468 (make_asn) /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++ builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build DATATOOL=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/datatool -oR /build/reproducible-path/ncbi-igblast-1.20.0/c++ \ @@ -23288,7 +23325,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.a .libalign_format.a.stamp ar cr libalign_format.a format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libalign_format.a /bin/ln -f .align_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.align_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/align_format' @@ -23517,7 +23554,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /bin/rm -f libbiblio.a .libbiblio.a.stamp ar cr libbiblio.a biblio__.o biblio___.o citation_base.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libbiblio.a /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/biblio' @@ -23527,22 +23564,22 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' @@ -23675,7 +23712,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' @@ -23775,7 +23812,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /bin/rm -f libblast_services.a .libblast_services.a.stamp ar cr libblast_services.a blast_services.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblast_services.a /bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blast_services.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services' @@ -23871,7 +23908,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLAST -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/x86_64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/x86_64 -I//usr/include/cc/gcc -D_DEBUGGING -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blast_sra_input/blast_sra_input.cpp -o blast_sra_input.o /bin/rm -f libblast_sra_input.a .libblast_sra_input.a.stamp ar cr libblast_sra_input.a blast_sra_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblast_sra_input.a /bin/ln -f .blast_sra_input.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blast_sra_input.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input' @@ -24031,7 +24068,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.a .libblastdb.a.stamp ar cr libblastdb.a blastdb__.o blastdb___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblastdb.a /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastdb' @@ -24398,7 +24435,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o /bin/rm -f libblastdb_format.a .libblastdb_format.a.stamp ar cr libblastdb_format.a seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblastdb_format.a /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/blastdb_format' @@ -26145,7 +26182,7 @@ -1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o /bin/rm -f libblastinput.a .libblastinput.a.stamp ar cr libblastinput.a blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblastinput.a /bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blastinput.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput' @@ -26328,7 +26365,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /bin/rm -f libblastxml.a .libblastxml.a.stamp ar cr libblastxml.a blastxml__.o blastxml___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblastxml.a /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml' @@ -26511,7 +26548,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libblastxml2.a .libblastxml2.a.stamp ar cr libblastxml2.a blastxml2__.o blastxml2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libblastxml2.a /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml2' @@ -26550,7 +26587,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.a .libcomposition_adjustment.a.stamp ar cr libcomposition_adjustment.a compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libcomposition_adjustment.a /bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.composition_adjustment.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/composition_adjustment' @@ -28408,12 +28445,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/dbapi_pool_balancer.cpp -o dbapi_pool_balancer.o /bin/rm -f libdbapi_driver.a .libdbapi_driver.a.stamp ar cr libdbapi_driver.a handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libdbapi_driver.a /bin/ln -f .dbapi_driver.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.dbapi_driver.dep /bin/rm -f libdbapi_driver-dll.so .libdbapi_driver-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libdbapi_driver-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libdbapi_driver-dll.so /bin/ln -f .dbapi_driver-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.dbapi_driver-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver' @@ -28645,7 +28682,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o /bin/rm -f libefetch.a .libefetch.a.stamp ar cr libefetch.a efetch__.o efetch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libefetch.a /bin/ln -f .efetch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.efetch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch' @@ -28828,7 +28865,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o /bin/rm -f libegquery.a .libegquery.a.stamp ar cr libegquery.a egquery__.o egquery___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libegquery.a /bin/ln -f .egquery.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.egquery.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/egquery' @@ -29011,7 +29048,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o /bin/rm -f libehistory.a .libehistory.a.stamp ar cr libehistory.a ehistory__.o ehistory___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libehistory.a /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/ehistory' @@ -29194,7 +29231,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o /bin/rm -f libeinfo.a .libeinfo.a.stamp ar cr libeinfo.a einfo__.o einfo___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libeinfo.a /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/einfo' @@ -29377,7 +29414,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o /bin/rm -f libelink.a .libelink.a.stamp ar cr libelink.a elink__.o elink___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libelink.a /bin/ln -f .elink.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/elink' @@ -29560,7 +29597,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/epost/epost___.cpp -o epost___.o /bin/rm -f libepost.a .libepost.a.stamp ar cr libepost.a epost__.o epost___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libepost.a /bin/ln -f .epost.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/epost' @@ -29743,7 +29780,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o /bin/rm -f libesearch.a .libesearch.a.stamp ar cr libesearch.a esearch__.o esearch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libesearch.a /bin/ln -f .esearch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.esearch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esearch' @@ -29926,7 +29963,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o /bin/rm -f libespell.a .libespell.a.stamp ar cr libespell.a espell__.o espell___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libespell.a /bin/ln -f .espell.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.espell.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/espell' @@ -30110,10 +30147,11 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o /bin/rm -f libesummary.a .libesummary.a.stamp ar cr libesummary.a esummary__.o esummary___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libesummary.a /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esummary' +/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/run_with_lock: Unable to rename log file make_esummary.log.new: No such file or directory. make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esummary' cd objtools/eutils/uilist/ && /usr/bin/make sources make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/uilist' @@ -30917,7 +30955,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o /bin/rm -f libeutils.a .libeutils.a.stamp ar cr libeutils.a eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libeutils.a /bin/ln -f .eutils.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.eutils.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/api' @@ -31099,7 +31137,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/rm -f libgbseq.a .libgbseq.a.stamp ar cr libgbseq.a gbseq__.o gbseq___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libgbseq.a /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/gbseq' @@ -31325,7 +31363,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=GENEINFO -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o /bin/rm -f libgene_info.a .libgene_info.a.stamp ar cr libgene_info.a gene_info.o gene_info_reader.o file_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libgene_info.a /bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.gene_info.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader' @@ -31579,7 +31617,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgeneral.a .libgeneral.a.stamp ar cr libgeneral.a general__.o general___.o uoconv.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libgeneral.a /bin/ln -f .general.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.general.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' @@ -31746,7 +31784,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.a .libgenome_collection.a.stamp ar cr libgenome_collection.a genome_collection__.o genome_collection___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libgenome_collection.a /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll' @@ -31906,7 +31944,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id1/id1___.cpp -o id1___.o /bin/rm -f libid1.a .libid1.a.stamp ar cr libid1.a id1__.o id1___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libid1.a /bin/ln -f .id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id1' @@ -32066,7 +32104,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.a .libid2.a.stamp ar cr libid2.a id2__.o id2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libid2.a /bin/ln -f .id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.id2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id2' @@ -32169,7 +32207,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.a .libigblast.a.stamp ar cr libigblast.a igblast.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libigblast.a /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/igblast' @@ -32209,7 +32247,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/lmdb/midl.c -o midl.o /bin/rm -f liblmdb.a .liblmdb.a.stamp ar cr liblmdb.a mdb.o midl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f liblmdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/liblmdb.a /bin/ln -f .lmdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.lmdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdb' @@ -32391,7 +32429,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /bin/rm -f libmedlars.a .libmedlars.a.stamp ar cr libmedlars.a medlars__.o medlars___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libmedlars.a /bin/ln -f .medlars.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.medlars.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medlars' @@ -32551,7 +32589,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.a .libmedline.a.stamp ar cr libmedline.a medline__.o medline___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libmedline.a /bin/ln -f .medline.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medline' @@ -32740,7 +32778,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla___.cpp -o mla___.o /bin/rm -f libmla.a .libmla.a.stamp ar cr libmla.a mla__.o mla___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libmla.a /bin/ln -f .mla.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mla' @@ -32905,7 +32943,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.a .libmlacli.a.stamp ar cr libmlacli.a mla_client.o mla_client_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libmlacli.a /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mla' @@ -33169,7 +33207,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.a .libncbi_xloader_blastdb.a.stamp ar cr libncbi_xloader_blastdb.a bdbloader.o cached_sequence.o local_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xloader_blastdb.a /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33335,7 +33373,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb_rmt.a .libncbi_xloader_blastdb_rmt.a.stamp ar cr libncbi_xloader_blastdb_rmt.a bdbloader_rmt.o remote_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xloader_blastdb_rmt.a /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33495,7 +33533,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpub.a .libpub.a.stamp ar cr libpub.a pub__.o pub___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libpub.a /bin/ln -f .pub.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pub' @@ -35424,7 +35462,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.a .libseq.a.stamp ar cr libseq.a seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseq.a /bin/ln -f .seq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq' @@ -35584,7 +35622,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /bin/rm -f libseqcode.a .libseqcode.a.stamp ar cr libseqcode.a seqcode__.o seqcode___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqcode.a /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqcode' @@ -35744,7 +35782,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.a .libseqedit.a.stamp ar cr libseqedit.a seqedit__.o seqedit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqedit.a /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqedit' @@ -35986,7 +36024,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /bin/rm -f libseqset.a .libseqset.a.stamp ar cr libseqset.a seqset__.o seqset___.o gb_release_file.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqset.a /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqset' @@ -36146,7 +36184,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.a .libseqsplit.a.stamp ar cr libseqsplit.a seqsplit__.o seqsplit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqsplit.a /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqsplit' @@ -36577,7 +36615,7 @@ Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.a .libsequtil.a.stamp ar cr libsequtil.a sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libsequtil.a /bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.sequtil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/sequtil' @@ -36737,7 +36775,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/submit/submit___.cpp -o submit___.o /bin/rm -f libsubmit.a .libsubmit.a.stamp ar cr libsubmit.a submit__.o submit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libsubmit.a /bin/ln -f .submit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/submit' @@ -37677,7 +37715,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /bin/rm -f libxcompress.a .libxcompress.a.stamp ar cr libxcompress.a compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxcompress.a /bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xcompress.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/api' @@ -39547,7 +39585,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls/ssl_tls13_keys.c -o mbedtls/ssl_tls13_keys.o /bin/rm -f libxconnect.a .libxconnect.a.stamp ar cr libxconnect.a ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_dispd.o ncbi_lbos.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/aria.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/chacha20.o mbedtls/chachapoly.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/constant_time.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hkdf.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/memory_buffer_alloc.o mbedtls/mps_reader.o mbedtls/mps_trace.o mbedtls/nist_kw.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/platform_util.o mbedtls/poly1305.o mbedtls/psa_crypto.o mbedtls/psa_crypto_aead.o mbedtls/psa_crypto_cipher.o mbedtls/psa_crypto_client.o mbedtls/psa_crypto_driver_wrappers.o mbedtls/psa_crypto_ecp.o mbedtls/psa_crypto_hash.o mbedtls/psa_crypto_mac.o mbedtls/psa_crypto_rsa.o mbedtls/psa_crypto_se.o mbedtls/psa_crypto_slot_management.o mbedtls/psa_crypto_storage.o mbedtls/psa_its_file.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/rsa_internal.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_msg.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o mbedtls/ssl_tls13_keys.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxconnect.a /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect' @@ -45640,7 +45678,7 @@ ead -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.a .libxobjmgr.a.stamp ar cr libxobjmgr.a seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxobjmgr.a /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr' @@ -46803,12 +46841,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader.a /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader.dep /bin/rm -f libncbi_xreader-dll.so .libncbi_xreader-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libncbi_xreader-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader-dll.so /bin/ln -f .ncbi_xreader-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47433,12 +47471,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/psg_loader_impl.cpp -o psg_loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xloader_genbank.dep /bin/rm -f libncbi_xloader_genbank-dll.so .libncbi_xloader_genbank-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libncbi_xloader_genbank-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xloader_genbank-dll.so /bin/ln -f .ncbi_xloader_genbank-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xloader_genbank-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47636,12 +47674,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_cache.a /bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_cache.dep /bin/rm -f libncbi_xreader_cache-dll.so .libncbi_xreader_cache-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libncbi_xreader_cache-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_cache-dll.so /bin/ln -f .ncbi_xreader_cache-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_cache-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/cache' @@ -47749,12 +47787,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp ar cr libncbi_xreader_id1.a reader_id1.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_id1.a /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_id1.dep /bin/rm -f libncbi_xreader_id1-dll.so .libncbi_xreader_id1-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libncbi_xreader_id1-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id1.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_id1-dll.so /bin/ln -f .ncbi_xreader_id1-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_id1-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id1' @@ -47862,12 +47900,12 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp ar cr libncbi_xreader_id2.a reader_id2.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_id2.a /bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_id2.dep /bin/rm -f libncbi_xreader_id2-dll.so .libncbi_xreader_id2-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libncbi_xreader_id2-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id2.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libncbi_xreader_id2-dll.so /bin/ln -f .ncbi_xreader_id2-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.ncbi_xreader_id2-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id2' @@ -48735,7 +48773,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.a .libproteinkmer.a.stamp ar cr libproteinkmer.a blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libproteinkmer.a /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer' @@ -48896,7 +48934,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.a .libpsg_client.a.stamp ar cr libpsg_client.a psg_client.o psg_client_transport.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libpsg_client.a /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client' @@ -49056,7 +49094,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o /bin/rm -f libpubmed.a .libpubmed.a.stamp ar cr libpubmed.a pubmed__.o pubmed___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libpubmed.a /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pubmed' @@ -49226,7 +49264,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.a .libscoremat.a.stamp ar cr libscoremat.a scoremat__.o scoremat___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libscoremat.a /bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.scoremat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/scoremat' @@ -50988,7 +51026,7 @@ EAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/lmdb /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /bin/rm -f libseqdb.a .libseqdb.a.stamp ar cr libseqdb.a seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqdb.a /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader' @@ -51722,7 +51760,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /bin/rm -f libseqmasks_io.a .libseqmasks_io.a.stamp ar cr libseqmasks_io.a mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libseqmasks_io.a /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io' @@ -52416,13 +52454,13 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/x86_64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/x86_64 -I//usr/include/cc/gcc -D_DEBUGGING -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/sra/readers/sra/snpread.cpp -o snpread.o /bin/rm -f libsraread.a .libsraread.a.stamp ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libsraread.a /bin/ln -f .sraread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.sraread.dep /bin/rm -f libsraread-dll.so .libsraread-dll.so.stamp /usr/bin/g++ -std=gnu++17 -msse4.2 -shared -o libsraread-dll.so -Wl,-rpath,//usr/lib64 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -L//usr/lib64 -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread : libsraread-dll.so -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libsraread-dll.so /bin/ln -f .sraread-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.sraread-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra/readers/sra' @@ -52449,7 +52487,7 @@ /usr/bin/gcc -msse4.2 -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.a .libtables.a.stamp ar cr libtables.a raw_scoremat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libtables.a /bin/ln -f .tables.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.tables.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/tables' @@ -52940,7 +52978,7 @@ ath/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.a .libtaxon1.a.stamp ar cr libtaxon1.a taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libtaxon1.a /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon1' @@ -53195,7 +53233,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o /bin/rm -f libtaxon3.a .libtaxon3.a.stamp ar cr libtaxon3.a taxon3__.o taxon3___.o taxon3.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libtaxon3.a /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon3' @@ -53355,7 +53393,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o /bin/rm -f libuilist.a .libuilist.a.stamp ar cr libuilist.a uilist__.o uilist___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libuilist.a /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/uilist' @@ -53447,7 +53485,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/profile/rtprofile.cpp -o rtprofile.o /bin/rm -f libutrtprof.a .libutrtprof.a.stamp ar cr libutrtprof.a rtprofile.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libutrtprof.a /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/profile' @@ -53633,7 +53671,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.a .libvalid.a.stamp ar cr libvalid.a valid__.o valid___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libvalid.a /bin/ln -f .valid.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.valid.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/valid' @@ -53793,7 +53831,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.a .libvariation.a.stamp ar cr libvariation.a variation__.o variation___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libvariation.a /bin/ln -f .variation.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation' @@ -54941,7 +54979,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/align/util/best_placement.cpp -o best_placement.o /bin/rm -f libxalgoalignutil.a .libxalgoalignutil.a.stamp ar cr libxalgoalignutil.a align_shadow.o blast_tabular.o score_builder.o score_lookup.o align_filter.o genomic_compart.o patch_sequence.o align_compare.o align_sort.o depth_filter.o tabular_fmt.o collection_score.o named_collection_score_impl.o best_placement.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalgoalignutil.a /bin/ln -f .xalgoalignutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalgoalignutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align/util' @@ -55384,7 +55422,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -DDO_INLINE -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/dbindex/dbindex_search.cpp -o dbindex_search.o /bin/rm -f libxalgoblastdbindex.a .libxalgoblastdbindex.a.stamp ar cr libxalgoblastdbindex.a sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalgoblastdbindex.a /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/dbindex' @@ -55484,7 +55522,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.a .libxalgodustmask.a.stamp ar cr libxalgodustmask.a symdust.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalgodustmask.a /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/dustmask' @@ -57380,7 +57418,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/sequence/micro_introns.cpp -o micro_introns.o /bin/rm -f libxalgoseq.a .libxalgoseq.a.stamp ar cr libxalgoseq.a adapter_search.o cpg.o nuc_prop.o orf.o prot_prop.o regexp_loc.o seq_match.o restriction.o antigenic.o coiled_coil.o signal_seq.o make_cdr_prods.o find_pattern.o gene_model.o project_exons.o transform_align.o annot_compare.o compare_feats.o align_group.o masking_delta.o align_cleanup.o util.o gap_analysis.o internal_stops.o micro_introns.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalgoseq.a /bin/ln -f .xalgoseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalgoseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence' @@ -61692,7 +61730,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.a .libxalgowinmask.a.stamp ar cr libxalgowinmask.a seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalgowinmask.a /bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalgowinmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/winmask' @@ -63585,7 +63623,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o /bin/rm -f libxalnmgr.a .libxalnmgr.a.stamp ar cr libxalnmgr.a aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxalnmgr.a /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr' @@ -70425,7 +70463,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.a .libxblast.a.stamp ar cr libxblast.a .core_aa_ungapped.o .core_blast_diagnostics.o .core_blast_engine.o .core_blast_extend.o .core_blast_filter.o .core_blast_gapalign.o .core_blast_hits.o .core_blast_hspstream.o .core_blast_itree.o .core_blast_kappa.o .core_blast_lookup.o .core_blast_aalookup.o .core_blast_aascan.o .core_blast_nalookup.o .core_blast_nascan.o .core_blast_message.o .core_blast_options.o .core_blast_psi.o .core_na_ungapped.o .core_blast_psi_priv.o .core_blast_seg.o .core_blast_seqsrc.o .core_blast_setup.o .core_blast_stat.o .core_blast_traceback.o .core_blast_util.o .core_gapinfo.o .core_greedy_align.o .core_hspfilter_collector.o .core_hspfilter_besthit.o .core_hspfilter_culling.o .core_link_hsps.o .core_lookup_util.o .core_lookup_wrap.o .core_matrix_freq_ratios.o .core_ncbi_std.o .core_ncbi_math.o .core_blast_encoding.o .core_pattern.o .core_phi_extend.o .core_phi_gapalign.o .core_phi_lookup.o .core_blast_parameters.o .core_blast_posit.o .core_blast_program.o .core_blast_query_info.o .core_blast_tune.o .core_blast_sw.o .core_blast_dynarray.o .core_split_query.o .core_gencode_singleton.o .core_index_ungapped.o .core_blast_traceback_mt_priv.o .core_blast_hspstream_mt_utils.o .core_boost_erf.o .core_jumper.o .core_hspfilter_mapper.o .core_spliced_hits.o blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxblast.a /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xblast.dep rm .core_phi_gapalign.c .core_blast_dynarray.c .core_boost_erf.c .core_blast_itree.c .core_blast_seqsrc.c .core_blast_engine.c .core_blast_filter.c .core_lookup_wrap.c .core_ncbi_math.c .core_index_ungapped.c .core_hspfilter_besthit.c .core_gencode_singleton.c .core_gapinfo.c .core_blast_psi.c .core_spliced_hits.c .core_blast_diagnostics.c .core_blast_hspstream.c .core_blast_lookup.c .core_blast_nascan.c .core_blast_hspstream_mt_utils.c .core_na_ungapped.c .core_phi_extend.c .core_blast_nalookup.c .core_blast_aalookup.c .core_blast_psi_priv.c .core_blast_encoding.c .core_jumper.c .core_blast_util.c .core_blast_posit.c .core_hspfilter_mapper.c .core_hspfilter_culling.c .core_ncbi_std.c .core_blast_program.c .core_blast_traceback.c .core_blast_stat.c .core_blast_setup.c .core_link_hsps.c .core_greedy_align.c .core_pattern.c .core_lookup_util.c .core_blast_hits.c .core_blast_kappa.c .core_blast_message.c .core_matrix_freq_ratios.c .core_blast_parameters.c .core_hspfilter_collector.c .core_aa_ungapped.c .core_blast_traceback_mt_priv.c .core_blast_aascan.c .core_phi_lookup.c .core_blast_gapalign.c .core_blast_seg.c .core_blast_query_info.c .core_split_query.c .core_blast_sw.c .core_blast_options.c .core_blast_tune.c .core_blast_extend.c @@ -71480,7 +71518,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o /bin/rm -f libxblastformat.a .libxblastformat.a.stamp ar cr libxblastformat.a blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxblastformat.a /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/format' @@ -73394,7 +73432,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/cgi/user_agent.cpp -o user_agent.o /bin/rm -f libxcgi.a .libxcgi.a.stamp ar cr libxcgi.a ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxcgi.a /bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xcgi.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi' @@ -74394,7 +74432,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o /bin/rm -f libxcleanup.a .libxcleanup.a.stamp ar cr libxcleanup.a autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxcleanup.a /bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xcleanup.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/cleanup' @@ -79022,7 +79060,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o /bin/rm -f libxconnserv.a .libxconnserv.a.stamp ar cr libxconnserv.a grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxconnserv.a /bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xconnserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services' @@ -82758,7 +82796,7 @@ ols/format/flat_qual_slots.cpp -o flat_qual_slots.o /bin/rm -f libxformat.a .libxformat.a.stamp ar cr libxformat.a accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxformat.a /bin/ln -f .xformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/format' @@ -83549,7 +83587,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/html/writer_htmlenc.cpp -o writer_htmlenc.o /bin/rm -f libxhtml.a .libxhtml.a.stamp ar cr libxhtml.a node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxhtml.a /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html' @@ -83708,7 +83746,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.a .libxlogging.a.stamp ar cr libxlogging.a message.o listener.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxlogging.a /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/logging' @@ -83939,7 +83977,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libxnetblast.a .libxnetblast.a.stamp ar cr libxnetblast.a blast__.o blast___.o names.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxnetblast.a /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blast' @@ -84104,7 +84142,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.a .libxnetblastcli.a.stamp ar cr libxnetblastcli.a blastclient.o blastclient_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxnetblastcli.a /bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xnetblastcli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blast' @@ -87051,7 +87089,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/edit/huge_asn_loader.cpp -o huge_asn_loader.o /bin/rm -f libxobjedit.a .libxobjedit.a.stamp ar cr libxobjedit.a gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o mla_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o huge_asn_reader.o huge_file.o huge_file_process.o huge_asn_loader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxobjedit.a /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit' @@ -92881,7 +92919,7 @@ cbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.a .libxobjread.a.stamp ar cr libxobjread.a reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxobjread.a /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers' @@ -94679,7 +94717,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.a .libxobjutil.a.stamp ar cr libxobjutil.a weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxobjutil.a /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/util' @@ -95171,7 +95209,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/qparse/parse_utils.cpp -o parse_utils.o /bin/rm -f libxqueryparse.a .libxqueryparse.a.stamp ar cr libxqueryparse.a query_parse.o parser.o query_tree_print.o query_exec.o parse_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxqueryparse.a /bin/ln -f .xqueryparse.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xqueryparse.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/qparse' @@ -95489,7 +95527,7 @@ /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/connection_pool.cpp -o connection_pool.o /bin/rm -f libxthrserv.a .libxthrserv.a.stamp ar cr libxthrserv.a threaded_server.o server.o server_monitor.o connection_pool.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib/libxthrserv.a /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect' @@ -95499,17 +95537,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.edit_imgt_file builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/edit_imgt_file.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/makeogrdb.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrannote builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/makeogrannote.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' @@ -95713,7 +95751,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp. /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp -o igblastn_app.o /usr/bin/g++ -std=gnu++17 -msse4.2 -Wl,-rpath,//usr/lib64 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastn_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lblast_app_util -ligblast -lblast_sra_input-static -lsraread-static -lblastinput-static -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -llmdb-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -L//usr/lib64 -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lpthread -lm -lpthread -o igblastn -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/igblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' @@ -95919,7 +95957,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp. /usr/bin/g++ -std=gnu++17 -msse4.2 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp -o igblastp_app.o /usr/bin/g++ -std=gnu++17 -msse4.2 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastp_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/lib -lblast_app_util -ligblast -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -llmdb-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lpthread -lm -lpthread -o igblastp -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/bin/igblastp make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' @@ -95931,33 +95969,33 @@ cd c\+\+ && make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo790712 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3696149 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo790712 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo3696149 check_r RUN_CHECK=Y; \ fi make[2]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build' make[2]: warning: -j12 forced in submake: resetting jobserver mode. ====================================================================== make[3]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo790735 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696176 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/test' -/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo790735 check_add_r || exit 5 +/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo3696176 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/jaeger' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib/jaeger' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/corelib' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' @@ -95965,15 +96003,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' SKIP -- util/regexp/test_pcre make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/regexp' -/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/xregexp' -/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo790770 check_add_r || exit 5 +/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696214 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: @@ -95986,13 +96024,13 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo790779 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696226 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo790770 check_add_r || exit 5 +/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3696214 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: @@ -96005,43 +96043,43 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo790810 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3696259 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo790770 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3696214 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/compress' -/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/diff' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/diff' -/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/image' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/image' -/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo790848 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696297 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/tables/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/tables/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/tables' -/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/sequtil' -/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/bitset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96049,12 +96087,12 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/bitset' -/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/qparse' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/qparse' -/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdb' @@ -96078,7 +96116,7 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdb' TEST -- util/lmdb/lmdb_test5 make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdb' -/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdbxx' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdbxx' @@ -96086,77 +96124,77 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/lmdbxx' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/demo' -/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo790747 check_add_r || exit 5 +/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo3696190 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/util' -/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo791116 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3696577 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791120 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696581 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/services' -/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo791116 check_add_r || exit 5 +/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo3696577 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/ext' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791116 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696577 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/test' -/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo791116 check_add_r || exit 5 +/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo3696577 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/daemons' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect/daemons' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/connect' -/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791140 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696601 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/cgi' -/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791148 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696610 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo791148 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3696610 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html/demo' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/html' -/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo791160 check_add_r || exit 5 +/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo3696631 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' @@ -96164,14 +96202,14 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo791160 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo3696631 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo791179 check_add_r || exit 5 +/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo3696669 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: @@ -96184,7 +96222,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo791199 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo3696700 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' @@ -96192,10 +96230,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system/project_tree_builder' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/build-system' -/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo791225 check_add_r || exit 5 +/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo3696726 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' @@ -96203,26 +96241,26 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' TEST -- serial/datatool/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/datatool' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791225 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696726 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/test' -/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo791225 check_add_r || exit 5 +/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo3696726 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/soap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/soap' -/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo791225 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo3696726 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/grpc_integration' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial/grpc_integration' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/serial' -/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/db' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo791298 check_add_r || exit 5 +/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo3696799 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -96230,38 +96268,38 @@ /bin/echo 'Warning: non-existent sub-project "bdb"' Warning: non-existent sub-project "bdb" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/db' -/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo791307 check_add_r || exit 5 +/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo3696808 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/util' -/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ctlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ctlib' -/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ftds100' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ftds100' -/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ftds-default' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/ftds-default' -/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/mysql' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/mysql' -/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project odbc due to unmet requirements: @@ -96274,7 +96312,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo791340 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo3696842 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' @@ -96282,7 +96320,7 @@ Warning: non-existent sub-project "samples" make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo791311 check_add_r || exit 5 +/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo3696812 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi/driver/samples' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96295,272 +96333,272 @@ /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/dbapi' -/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791379 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696882 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791379 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696882 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/general' -/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/biblio' -/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medline' -/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pub' -/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqcode' -/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791407 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696910 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791407 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696910 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seq' -/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791419 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696923 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqset/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqset/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqset' -/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/submit' -/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqedit' -/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqsplit' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791440 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3696943 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id1/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id1/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id1' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/id2' -/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/entrez2' -/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pubmed' -/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/medlars' -/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mla' -/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/proj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/proj' -/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/scoremat' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blast' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastdb' -/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml' -/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/blastxml2' -/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mmdb' -/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/cn3d' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/cn3d' -/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/cdd' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/cdd' -/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/ncbimime' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcsubstance' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcsubstance' -/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcassay' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcassay' -/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcassay2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/pcassay2' -/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/gbseq' -/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/insdseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/insdseq' -/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/tinyseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/tinyseq' -/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/biotree' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/biotree' -/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/entrezgene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/entrezgene' -/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/omssa' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/omssa' -/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/remap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/remap' -/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqtest' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/seqtest' -/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon1' -/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/taxon3' -/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/gbproj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/gbproj' -/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/trackmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/trackmgr' -/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/valerr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/valerr' -/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/valid' -/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/access' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/access' -/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/docsum' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/docsum' -/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/featdef' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/featdef' -/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo791645 check_add_r || exit 5 +/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo3697104 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll/gc_cli' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll/gc_cli' @@ -96569,69 +96607,69 @@ SKIP -- objects/genomecoll/gc_cli/gc_cli (unmet build REQUIRES) make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll/gc_cli' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genomecoll' -/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/homologene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/homologene' -/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mim' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/mim' -/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/objprt' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/objprt' -/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation' -/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/macro' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/macro' -/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genesbyloc' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/genesbyloc' -/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/coords' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/coords' -/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/varrep' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/varrep' -/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo791690 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3697171 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo791695 check_add_r || exit 5 +/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo3697175 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo791695 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo3697175 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/variation_libs' -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo791375 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo3696878 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/dbsnp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo791707 check_add_r || exit 5 +/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo3697189 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/dbsnp/primary_track' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96639,65 +96677,65 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/dbsnp/primary_track' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects/dbsnp' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objects' -/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791716 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697200 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/test' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo791716 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3697200 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791725 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697209 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/util/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/util/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/util' -/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo791716 check_add_r || exit 5 +/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo3697200 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr/split' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objmgr' -/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo791746 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3697243 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/app' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/app' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791746 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697243 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791746 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697243 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/readers' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo791763 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3697266 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo791767 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3697270 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' @@ -96705,7 +96743,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791767 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697270 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/test' @@ -96714,10 +96752,10 @@ TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo791763 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo3697266 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791862 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697382 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96728,10 +96766,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo791763 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo3697266 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo791875 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3697395 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' @@ -96739,7 +96777,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791875 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697395 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96752,10 +96790,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo791763 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo3697266 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791905 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697425 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96766,10 +96804,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo791763 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3697266 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/blastdb_format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo791918 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697439 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast/blastdb_format/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96783,18 +96821,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo791932 check_add_r || exit 5 +/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo3697453 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/diag' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/diag' -/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo791932 check_add_r || exit 5 +/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo3697453 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791940 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697461 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' @@ -96803,10 +96841,10 @@ SKIP -- objtools/pubseq_gateway/cassandra/test/psg_cassandra_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' -/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo791932 check_add_r || exit 5 +/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo3697453 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791951 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697472 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client/test' @@ -96815,7 +96853,7 @@ SKIP -- objtools/pubseq_gateway/client/test/test_psg_client_impl (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/client' -/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo791932 check_add_r || exit 5 +/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo3697453 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project protobuf due to unmet requirements: @@ -96835,10 +96873,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo791932 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3697453 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo791977 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697497 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' @@ -96852,43 +96890,43 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo791996 check_add_r || exit 5 +/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo3697516 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/cache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/cache' -/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id1' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/id1' -/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' -/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo792001 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697520 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96896,10 +96934,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo791996 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3697516 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792035 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697553 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders/blastdb/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96912,20 +96950,20 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/data_loaders' -/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/simple' -/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo792051 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3697568 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792051 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697568 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/alnmgr/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96937,63 +96975,63 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/egquery' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/egquery' -/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/elink' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/elink' -/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/epost' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/epost' -/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esearch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esearch' -/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/espell' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/espell' -/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esummary' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/esummary' -/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/linkout' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/linkout' -/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/einfo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/uilist' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/ehistory' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo792112 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697628 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch/test' @@ -97002,41 +97040,41 @@ TEST -- objtools/eutils/efetch/test/test_pubmed_article make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/efetch' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo792066 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3697583 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/eutils' -/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792205 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697720 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/unit_test' -/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo792205 check_add_r || exit 5 +/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo3697720 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/pubmed_fetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/pubmed_fetch' -/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo792205 check_add_r || exit 5 +/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo3697720 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/test_remote_updater' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit/test_remote_updater' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/edit' -/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo792221 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697736 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/cleanup/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/cleanup/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/cleanup' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -97047,19 +97085,19 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792236 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697752 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo791737 check_add_r || exit 5 +/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo3697232 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792244 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697760 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools/align_format/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -97085,16 +97123,16 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo792265 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo3697780 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo792271 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo3697784 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra/readers/sra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo792276 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3697788 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra/readers/sra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra/readers/sra/test' @@ -97139,50 +97177,50 @@ /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/sra' -/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo792598 check_add_r || exit 5 +/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3698095 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/dustmask' -/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo792598 check_add_r || exit 5 +/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo3698095 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/winmask' -/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo792598 check_add_r || exit 5 +/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo3698095 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo792610 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3698107 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792610 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698107 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/sequence' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo792598 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3698095 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/composition_adjustment' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/core' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/core' -/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/dbindex' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo792634 check_add_r || exit 5 +/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo3698131 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/dbindex/makeindex' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/dbindex/makeindex' @@ -97193,15 +97231,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/api' -/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792658 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698158 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' @@ -97210,29 +97248,29 @@ SKIP -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/proteinkmer' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/format' -/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792673 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698173 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput/unit_test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo792673 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3698173 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput/demo' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blastinput' -/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792685 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698185 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' @@ -97241,7 +97279,7 @@ SKIP -- algo/blast/blast_sra_input/unit_test/blastsrainput_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/blast_sra_input' -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo792622 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3698119 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast/igblast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -97255,18 +97293,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/blast' /bin/echo 'Warning: non-existent sub-project "segmask"' Warning: non-existent sub-project "segmask" -/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo792598 check_add_r || exit 5 +/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo3698095 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo792704 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo3698204 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo792708 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo3698208 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align/util/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align/util/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo792708 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698208 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo/align/util/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -97308,15 +97346,15 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/algo' -/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo792741 check_add_r || exit 5 +/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo3698237 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/third_party' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/third_party' -/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo792741 check_add_r || exit 5 +/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo3698237 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/third_party_static' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: @@ -97344,10 +97382,10 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo792741 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo3698237 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/jsonwrapp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo792768 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo3698263 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/jsonwrapp/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc/jsonwrapp/test' @@ -97369,7 +97407,7 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo790731 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo3696170 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app' make[4]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' @@ -97386,7 +97424,7 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo792787 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo3698280 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blast' @@ -97452,7 +97490,7 @@ Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo792787 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo3698280 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/igblast' @@ -97470,7 +97508,7 @@ Warning: non-existent sub-project "dustmasker" /bin/echo 'Warning: non-existent sub-project "segmasker"' Warning: non-existent sub-project "segmasker" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo792787 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo3698280 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1420-DebugOptMT64/build/app/blastdb' @@ -97615,7 +97653,7 @@ ABS -- [util/lmdb] lmdb_test.sh 3 ABS -- [util/lmdb] lmdb_test.sh 4 ABS -- [util/lmdb] lmdb_test.sh 5 -OK -- [serial/datatool] datatool.sh (real 0.28, user 0.20, sys 0.07) +OK -- [serial/datatool] datatool.sh (real 0.40, user 0.14, sys 0.05) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_mt ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_st @@ -97652,11 +97690,11 @@ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0' find . -name igblastn -./c++/GCC1420-DebugOptMT64/bin/igblastn ./c++/GCC1420-DebugOptMT64/build/app/igblast/igblastn +./c++/GCC1420-DebugOptMT64/bin/igblastn find . -name igblastp -./c++/GCC1420-DebugOptMT64/bin/igblastp ./c++/GCC1420-DebugOptMT64/build/app/igblast/igblastp +./c++/GCC1420-DebugOptMT64/bin/igblastp make[1]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0' dh_install -O--sourcedirectory=c\+\+ dh_installdocs -O--sourcedirectory=c\+\+ @@ -97696,12 +97734,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3069929/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/4191482 and its subdirectories -I: Current time: Thu Apr 9 08:06:25 -12 2026 -I: pbuilder-time-stamp: 1775765185 +I: removing directory /srv/workspace/pbuilder/3069929 and its subdirectories +I: Current time: Sat Mar 8 05:48:41 +14 2025 +I: pbuilder-time-stamp: 1741362521