Diff of the two buildlogs: -- --- b1/build.log 2025-03-08 12:55:07.239171594 +0000 +++ b2/build.log 2025-03-08 14:13:16.939302236 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Apr 10 06:37:23 -12 2026 -I: pbuilder-time-stamp: 1775846243 +I: Current time: Sun Mar 9 02:55:11 +14 2025 +I: pbuilder-time-stamp: 1741438511 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying gcc-14.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3417270/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/D01_modify_environment starting +debug: Running on ionos1-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 8 12:55 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='1380f7982888435aa478429a0b3dc9fa' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3417270' - PS1='# ' - PS2='> ' + INVOCATION_ID=f7e7ccdcbb674945a556a20cc87397fe + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2999135 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Q7KdM7pT/pbuilderrc_XnjK --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Q7KdM7pT/b1 --logfile b1/build.log parasail_2.6.2+dfsg-2.dsc' - SUDO_GID='111' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Q7KdM7pT/pbuilderrc_iFzK --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Q7KdM7pT/b2 --logfile b2/build.log parasail_2.6.2+dfsg-2.dsc' + SUDO_GID=110 + SUDO_UID=105 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos15-amd64 6.12.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.12-1~bpo12+1 (2025-02-23) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3417270/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -209,7 +241,7 @@ Get: 94 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.4-1 [323 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libhts-dev amd64 1.21+ds-1 [1733 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libsimde-dev all 0.8.2-2 [467 kB] -Fetched 40.5 MB in 1s (43.4 MB/s) +Fetched 40.5 MB in 2s (20.6 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19783 files and directories currently installed.) @@ -608,7 +640,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/parasail-2.6.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../parasail_2.6.2+dfsg-2_source.changes +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/parasail-2.6.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../parasail_2.6.2+dfsg-2_source.changes dpkg-buildpackage: info: source package parasail dpkg-buildpackage: info: source version 2.6.2+dfsg-2 dpkg-buildpackage: info: source distribution unstable @@ -929,302 +965,324 @@ make[1]: Leaving directory '/build/reproducible-path/parasail-2.6.2+dfsg' dh_auto_build - make -j42 + make -j20 make[1]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' make all-am make[2]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o apps/parasail_stats.o apps/parasail_stats.c g++ -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -c -o apps/parasail_aligner-parasail_aligner.o `test -f 'apps/parasail_aligner.cpp' || echo './'`apps/parasail_aligner.cpp gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o contrib/getMemorySize.o contrib/getMemorySize.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-cigar.lo `test -f 'src/cigar.c' || echo './'`src/cigar.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-cpuid.lo `test -f 'src/cpuid.c' || echo './'`src/cpuid.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-function_lookup.lo `test -f 'src/function_lookup.c' || echo './'`src/function_lookup.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-io.lo `test -f 'src/io.c' || echo './'`src/io.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-isastubs.lo `test -f 'src/isastubs.c' || echo './'`src/isastubs.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-matrix_lookup.lo `test -f 'src/matrix_lookup.c' || echo './'`src/matrix_lookup.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-memory.lo `test -f 'src/memory.c' || echo './'`src/memory.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-parser.lo `test -f 'src/parser.c' || echo './'`src/parser.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-pssw.lo `test -f 'src/pssw.c' || echo './'`src/pssw.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-time.lo `test -f 'src/time.c' || echo './'`src/time.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-nw_dispatch.lo `test -f 'src/nw_dispatch.c' || echo './'`src/nw_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_dispatch.lo `test -f 'src/sg_dispatch.c' || echo './'`src/sg_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sw_dispatch.lo `test -f 'src/sw_dispatch.c' || echo './'`src/sw_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qb_dispatch.lo `test -f 'src/sg_qb_dispatch.c' || echo './'`src/sg_qb_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qe_dispatch.lo `test -f 'src/sg_qe_dispatch.c' || echo './'`src/sg_qe_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qx_dispatch.lo `test -f 'src/sg_qx_dispatch.c' || echo './'`src/sg_qx_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_db_dispatch.lo `test -f 'src/sg_db_dispatch.c' || echo './'`src/sg_db_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_de_dispatch.lo `test -f 'src/sg_de_dispatch.c' || echo './'`src/sg_de_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_dx_dispatch.lo `test -f 'src/sg_dx_dispatch.c' || echo './'`src/sg_dx_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qb_de_dispatch.lo `test -f 'src/sg_qb_de_dispatch.c' || echo './'`src/sg_qb_de_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qe_db_dispatch.lo `test -f 'src/sg_qe_db_dispatch.c' || echo './'`src/sg_qe_db_dispatch.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_db_dispatch.lo `test -f 'src/sg_db_dispatch.c' || echo './'`src/sg_db_dispatch.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_de_dispatch.lo `test -f 'src/sg_de_dispatch.c' || echo './'`src/sg_de_dispatch.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/cpuid.c -fPIC -DPIC -o src/.libs/libparasail_la-cpuid.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/cigar.c -fPIC -DPIC -o src/.libs/libparasail_la-cigar.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sw_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/parser.c -fPIC -DPIC -o src/.libs/libparasail_la-parser.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/memory.c -fPIC -DPIC -o src/.libs/libparasail_la-memory.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/matrix_lookup.c -fPIC -DPIC -o src/.libs/libparasail_la-matrix_lookup.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/isastubs.c -fPIC -DPIC -o src/.libs/libparasail_la-isastubs.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/time.c -fPIC -DPIC -o src/.libs/libparasail_la-time.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/parser.c -fPIC -DPIC -o src/.libs/libparasail_la-parser.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/function_lookup.c -fPIC -DPIC -o src/.libs/libparasail_la-function_lookup.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/cpuid.c -fPIC -DPIC -o src/.libs/libparasail_la-cpuid.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_db_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qb_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qb_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/io.c -fPIC -DPIC -o src/.libs/libparasail_la-io.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/time.c -fPIC -DPIC -o src/.libs/libparasail_la-time.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/pssw.c -fPIC -DPIC -o src/.libs/libparasail_la-pssw.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/dispatch_profile.c -fPIC -DPIC -o src/.libs/libparasail_la-dispatch_profile.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/striped_unwind.c -fPIC -DPIC -o src/.libs/libparasail_la-striped_unwind.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qe_de_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qe_de_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-nw_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/matrix_lookup.c -fPIC -DPIC -o src/.libs/libparasail_la-matrix_lookup.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sw_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/memory.c -fPIC -DPIC -o src/.libs/libparasail_la-memory.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qe_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qe_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qe_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qe_db_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qx_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qx_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qb_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qb_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_db_dispatch.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_de_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_de_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-nw_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/satcheck.c -fPIC -DPIC -o src/.libs/libparasail_la-satcheck.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_dx_dispatch.lo `test -f 'src/sg_dx_dispatch.c' || echo './'`src/sg_dx_dispatch.c +src/cpuid.c:137:12: warning: 'check_xcr0_ymm' defined but not used [-Wunused-function] + 137 | static int check_xcr0_ymm() + | ^~~~~~~~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_dx_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_dx_dispatch.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qx_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qx_dispatch.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qb_de_dispatch.lo `test -f 'src/sg_qb_de_dispatch.c' || echo './'`src/sg_qb_de_dispatch.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qe_db_dispatch.lo `test -f 'src/sg_qe_db_dispatch.c' || echo './'`src/sg_qe_db_dispatch.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qb_de_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qb_de_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qe_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qe_db_dispatch.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qb_db_dispatch.lo `test -f 'src/sg_qb_db_dispatch.c' || echo './'`src/sg_qb_db_dispatch.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-sg_qe_de_dispatch.lo `test -f 'src/sg_qe_de_dispatch.c' || echo './'`src/sg_qe_de_dispatch.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qb_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qb_db_dispatch.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qe_de_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qe_de_dispatch.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-dispatch_profile.lo `test -f 'src/dispatch_profile.c' || echo './'`src/dispatch_profile.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/dispatch_profile.c -fPIC -DPIC -o src/.libs/libparasail_la-dispatch_profile.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-satcheck.lo `test -f 'src/satcheck.c' || echo './'`src/satcheck.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/satcheck.c -fPIC -DPIC -o src/.libs/libparasail_la-satcheck.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-striped_unwind.lo `test -f 'src/striped_unwind.c' || echo './'`src/striped_unwind.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_la-traceback.lo `test -f 'src/traceback.c' || echo './'`src/traceback.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/striped_unwind.c -fPIC -DPIC -o src/.libs/libparasail_la-striped_unwind.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/traceback.c -fPIC -DPIC -o src/.libs/libparasail_la-traceback.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw.lo `test -f 'src/nw.c' || echo './'`src/nw.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg_scan.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg.lo `test -f 'src/sg.c' || echo './'`src/sg.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw.lo `test -f 'src/sw.c' || echo './'`src/sw.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_scan.lo `test -f 'src/nw_scan.c' || echo './'`src/nw_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_scan.lo `test -f 'src/sg_scan.c' || echo './'`src/sg_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_scan.lo `test -f 'src/sw_scan.c' || echo './'`src/sw_scan.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_banded.lo `test -f 'src/nw_banded.c' || echo './'`src/nw_banded.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_stats.lo `test -f 'src/nw_stats.c' || echo './'`src/nw_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_stats.lo `test -f 'src/sg_stats.c' || echo './'`src/sg_stats.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_stats.lo `test -f 'src/sw_stats.c' || echo './'`src/sw_stats.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_stats_scan.lo `test -f 'src/nw_stats_scan.c' || echo './'`src/nw_stats_scan.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_banded.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_banded.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_stats_scan.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_qb_db_dispatch.c -fPIC -DPIC -o src/.libs/libparasail_la-sg_qb_db_dispatch.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_stats.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_stats.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg_stats.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_stats_scan.lo `test -f 'src/sg_stats_scan.c' || echo './'`src/sg_stats_scan.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_stats.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_stats_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_stats_scan.lo `test -f 'src/sw_stats_scan.c' || echo './'`src/sw_stats_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_trace.lo `test -f 'src/sg_trace.c' || echo './'`src/sg_trace.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_trace.lo `test -f 'src/sw_trace.c' || echo './'`src/sw_trace.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_stats_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_trace.lo `test -f 'src/nw_trace.c' || echo './'`src/nw_trace.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_trace.lo `test -f 'src/sg_trace.c' || echo './'`src/sg_trace.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_trace.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_trace_scan.lo `test -f 'src/nw_trace_scan.c' || echo './'`src/nw_trace_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg_trace.o -src/cpuid.c:137:12: warning: 'check_xcr0_ymm' defined but not used [-Wunused-function] - 137 | static int check_xcr0_ymm() - | ^~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_trace.lo `test -f 'src/sw_trace.c' || echo './'`src/sw_trace.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-nw_trace_scan.lo `test -f 'src/nw_trace_scan.c' || echo './'`src/nw_trace_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_trace_scan.lo `test -f 'src/sg_trace_scan.c' || echo './'`src/sg_trace_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_trace_scan.lo `test -f 'src/sw_trace_scan.c' || echo './'`src/sw_trace_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw.lo `test -f 'src/nw.c' || echo './'`src/nw.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg.lo `test -f 'src/sg.c' || echo './'`src/sg.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw.lo `test -f 'src/sw.c' || echo './'`src/sw.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_scan.lo `test -f 'src/nw_scan.c' || echo './'`src/nw_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg_scan.lo `test -f 'src/sg_scan.c' || echo './'`src/sg_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_scan.lo `test -f 'src/sw_scan.c' || echo './'`src/sw_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_banded.lo `test -f 'src/nw_banded.c' || echo './'`src/nw_banded.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_stats.lo `test -f 'src/nw_stats.c' || echo './'`src/nw_stats.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_trace.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sg_trace_scan.lo `test -f 'src/sg_trace_scan.c' || echo './'`src/sg_trace_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_la-sw_trace_scan.lo `test -f 'src/sw_trace_scan.c' || echo './'`src/sw_trace_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw.lo `test -f 'src/nw.c' || echo './'`src/nw.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_trace.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg.lo `test -f 'src/sg.c' || echo './'`src/sg.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw.lo `test -f 'src/sw.c' || echo './'`src/sw.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-nw_trace_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 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-ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sg_trace_scan.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_stats.lo `test -f 'src/sw_stats.c' || echo './'`src/sw_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_scan.lo `test -f 'src/nw_scan.c' || echo './'`src/nw_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg_scan.lo `test -f 'src/sg_scan.c' || echo './'`src/sg_scan.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_la-sw_trace_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_scan.lo `test -f 'src/sw_scan.c' || echo './'`src/sw_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_stats_scan.lo `test -f 'src/nw_stats_scan.c' || echo './'`src/nw_stats_scan.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_banded.lo `test -f 'src/nw_banded.c' || echo './'`src/nw_banded.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sw.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sw_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg_stats_scan.lo `test -f 'src/sg_stats_scan.c' || echo './'`src/sg_stats_scan.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_stats.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_stats.lo `test -f 'src/nw_stats.c' || echo './'`src/nw_stats.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sw_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_banded.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_banded.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg_stats.lo `test -f 'src/sg_stats.c' || echo './'`src/sg_stats.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_stats.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_stats.lo `test -f 'src/sw_stats.c' || echo './'`src/sw_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-nw_stats_scan.lo `test -f 'src/nw_stats_scan.c' || echo './'`src/nw_stats_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sg_stats_scan.lo `test -f 'src/sg_stats_scan.c' || echo './'`src/sg_stats_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_stats_scan.lo `test -f 'src/sw_stats_scan.c' || echo './'`src/sw_stats_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw.lo `test -f 'src/nw.c' || echo './'`src/nw.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg_stats.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg.lo `test -f 'src/sg.c' || echo './'`src/sg.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sw_stats.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg_stats_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-nw_stats_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_table_la-sw_stats_scan.lo `test -f 'src/sw_stats_scan.c' || echo './'`src/sw_stats_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw.lo `test -f 'src/nw.c' || echo './'`src/nw.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg.lo `test -f 'src/sg.c' || echo './'`src/sg.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw.lo `test -f 'src/sw.c' || echo './'`src/sw.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_scan.lo `test -f 'src/nw_scan.c' || echo './'`src/nw_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg_scan.lo `test -f 'src/sg_scan.c' || echo './'`src/sg_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw_scan.lo `test -f 'src/sw_scan.c' || echo './'`src/sw_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_banded.lo `test -f 'src/nw_banded.c' || echo './'`src/nw_banded.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sw_stats_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw.lo `test -f 'src/sw.c' || echo './'`src/sw.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_table_la-sg_stats_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-nw.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_scan.lo `test -f 'src/nw_scan.c' || echo './'`src/nw_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sg.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_stats.lo `test -f 'src/nw_stats.c' || echo './'`src/nw_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg_scan.lo `test -f 'src/sg_scan.c' || echo './'`src/sg_scan.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw_scan.lo `test -f 'src/sw_scan.c' || echo './'`src/sw_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sw.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_banded.lo `test -f 'src/nw_banded.c' || echo './'`src/nw_banded.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-nw_scan.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_banded.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-nw_banded.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sw_scan.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sg_scan.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sw_scan.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_stats.lo `test -f 'src/nw_stats.c' || echo './'`src/nw_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg_stats.lo `test -f 'src/sg_stats.c' || echo './'`src/sg_stats.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw_stats.lo `test -f 'src/sw_stats.c' || echo './'`src/sw_stats.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_banded.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-nw_banded.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_stats_scan.lo `test -f 'src/nw_stats_scan.c' || echo './'`src/nw_stats_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats.c -fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-nw_stats.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg_stats.lo `test -f 'src/sg_stats.c' || echo './'`src/sg_stats.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw_stats.lo `test -f 'src/sw_stats.c' || echo './'`src/sw_stats.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-nw_stats_scan.lo `test -f 'src/nw_stats_scan.c' || echo './'`src/nw_stats_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sg_stats_scan.lo `test -f 'src/sg_stats_scan.c' || echo './'`src/sg_stats_scan.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_novec_rowcol_la-sw_stats_scan.lo `test -f 'src/sw_stats_scan.c' || echo './'`src/sw_stats_scan.c libtool: compile: gcc -DHAVE_CONFIG_H -I. 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-/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_scan_sse2_128_64.lo `test -f 'src/nw_scan_sse2_128_64.c' || echo './'`src/nw_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_scan_sse2_128_64.lo `test -f 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-fPIC -DPIC -o src/.libs/libparasail_novec_rowcol_la-sw_stats_scan.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_scan_sse2_128_32.lo `test -f 'src/nw_scan_sse2_128_32.c' || echo './'`src/nw_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_scan_sse2_128_16.lo `test -f 'src/sg_scan_sse2_128_16.c' || echo './'`src/sg_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_scan_sse2_128_16.lo `test -f 'src/sw_scan_sse2_128_16.c' || echo './'`src/sw_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_scan_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_scan_sse2_128_8.lo `test -f 'src/sg_scan_sse2_128_8.c' || echo './'`src/sg_scan_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_scan_sse2_128_8.lo `test -f 'src/sw_scan_sse2_128_8.c' || echo './'`src/sw_scan_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_scan_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_scan_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_diag_sse2_128_64.lo `test -f 'src/nw_diag_sse2_128_64.c' || echo './'`src/nw_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_diag_sse2_128_32.lo `test -f 'src/sg_diag_sse2_128_32.c' || echo './'`src/sg_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_diag_sse2_128_32.lo `test -f 'src/sw_diag_sse2_128_32.c' || echo './'`src/sw_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_diag_sse2_128_16.lo `test -f 'src/nw_diag_sse2_128_16.c' || echo './'`src/nw_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_diag_sse2_128_64.lo `test -f 'src/sg_diag_sse2_128_64.c' || echo './'`src/sg_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_scan_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_diag_sse2_128_64.lo `test -f 'src/sw_diag_sse2_128_64.c' || echo './'`src/sw_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_diag_sse2_128_16.lo `test -f 'src/sg_diag_sse2_128_16.c' || echo './'`src/sg_diag_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src 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'./'`src/sg_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_diag_sse2_128_8.lo `test -f 'src/sw_diag_sse2_128_8.c' || echo './'`src/sw_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_striped_sse2_128_64.lo 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-c -o src/libparasail_sse2_la-sg_striped_sse2_128_64.lo `test -f 'src/sg_striped_sse2_128_64.c' || echo './'`src/sg_striped_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_diag_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_diag_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_striped_sse2_128_32.lo `test -f 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+/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_striped_sse2_128_32.lo `test -f 'src/nw_striped_sse2_128_32.c' || echo './'`src/nw_striped_sse2_128_32.c 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-/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_striped_sse2_128_16.lo `test -f 'src/nw_striped_sse2_128_16.c' || echo './'`src/nw_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_striped_sse2_128_16.lo `test -f 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_striped_sse2_128_16.lo `test -f 'src/sw_striped_sse2_128_16.c' || echo './'`src/sw_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_striped_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_striped_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_striped_sse2_128_8.lo `test -f 'src/nw_striped_sse2_128_8.c' || echo './'`src/nw_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_striped_sse2_128_8.lo `test -f 'src/sg_striped_sse2_128_8.c' || echo './'`src/sg_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_64.lo `test -f 'src/sg_stats_scan_sse2_128_64.c' || echo './'`src/sg_stats_scan_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_64.lo `test -f 'src/sg_stats_scan_sse2_128_64.c' || echo './'`src/sg_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_64.lo `test -f 'src/sw_stats_scan_sse2_128_64.c' || echo './'`src/sw_stats_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_32.lo `test -f 'src/sw_stats_scan_sse2_128_32.c' || echo './'`src/sw_stats_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_scan_sse2_128_16.lo `test -f 'src/nw_stats_scan_sse2_128_16.c' || echo './'`src/nw_stats_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_16.lo `test -f 'src/sg_stats_scan_sse2_128_16.c' || echo './'`src/sg_stats_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_16.lo `test 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-Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_scan_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_32.lo `test -f 'src/sg_stats_scan_sse2_128_32.c' || echo './'`src/sg_stats_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_32.lo `test -f 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-Wall -pedantic -c src/sg_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_16.lo `test -f 'src/sw_stats_scan_sse2_128_16.c' || echo './'`src/sw_stats_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_scan_sse2_128_8.lo `test -f 'src/nw_stats_scan_sse2_128_8.c' || echo './'`src/nw_stats_scan_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_scan_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_scan_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c +In file included from src/sg_stats_scan_sse2_128_64.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here + 417 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here + 418 | __m128i vHtS; + | ^~~~ +In function '_mm_add_epi64', + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here + 419 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_16.o +In file included from src/nw_stats_scan_sse2_128_32.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:416:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:341:17: note: 'vHtM' was declared here + 341 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:417:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:342:17: note: 'vHtS' was declared here + 342 | __m128i vHtS; + | ^~~~ +In function '_mm_add_epi32', + inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:418:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:343:17: note: 'vHtL' was declared here + 343 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_64.lo `test -f 'src/sw_stats_diag_sse2_128_64.c' || echo './'`src/sw_stats_diag_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_scan_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_32.lo `test -f 'src/nw_stats_diag_sse2_128_32.c' || echo './'`src/nw_stats_diag_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c In file included from src/nw_stats_scan_sse2_128_64.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_64.c:35:9, @@ -1255,99 +1313,102 @@ src/nw_stats_scan_sse2_128_64.c:386:17: note: 'vHtL' was declared here 386 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c -In file included from src/sw_stats_scan_sse2_128_32.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_64.o +In file included from src/sg_stats_scan_sse2_128_32.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, - inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:409:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:438:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': -src/sw_stats_scan_sse2_128_32.c:334:17: note: 'vHtM' was declared here - 334 | __m128i vHtM; +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_32.o +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:363:17: note: 'vHtM' was declared here + 363 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, - inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:410:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:439:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': -src/sw_stats_scan_sse2_128_32.c:335:17: note: 'vHtS' was declared here - 335 | __m128i vHtS; +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:364:17: note: 'vHtS' was declared here + 364 | __m128i vHtS; | ^~~~ In function '_mm_add_epi32', - inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:411:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:440:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': -src/sw_stats_scan_sse2_128_32.c:336:17: note: 'vHtL' was declared here - 336 | __m128i vHtL; +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:365:17: note: 'vHtL' was declared here + 365 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_8.o -In file included from src/sg_stats_scan_sse2_128_64.c:16: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_32.o +In file included from src/nw_stats_scan_sse2_128_16.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:397:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here - 417 | __m128i vHtM; +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:322:17: note: 'vHtM' was declared here + 322 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:398:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here - 418 | __m128i vHtS; +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:323:17: note: 'vHtS' was declared here + 323 | __m128i vHtS; | ^~~~ -In function '_mm_add_epi64', - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here - 419 | __m128i vHtL; +In function '_mm_adds_epi16', + inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:399:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:324:17: note: 'vHtL' was declared here + 324 | __m128i vHtL; | ^~~~ -In file included from src/nw_stats_scan_sse2_128_32.c:16: +In file included from src/sw_stats_scan_sse2_128_32.c:17: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:416:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, + inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:409:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:341:17: note: 'vHtM' was declared here - 341 | __m128i vHtM; +src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': +src/sw_stats_scan_sse2_128_32.c:334:17: note: 'vHtM' was declared here + 334 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:417:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, + inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:410:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:342:17: note: 'vHtS' was declared here - 342 | __m128i vHtS; +src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': +src/sw_stats_scan_sse2_128_32.c:335:17: note: 'vHtS' was declared here + 335 | __m128i vHtS; | ^~~~ In function '_mm_add_epi32', - inlined from 'parasail_nw_stats_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:418:19: + inlined from 'parasail_sw_stats_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:411:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:343:17: note: 'vHtL' was declared here - 343 | __m128i vHtL; +src/sw_stats_scan_sse2_128_32.c: In function 'parasail_sw_stats_scan_profile_sse2_128_32': +src/sw_stats_scan_sse2_128_32.c:336:17: note: 'vHtL' was declared here + 336 | __m128i vHtL; | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c In file included from src/sw_stats_scan_sse2_128_64.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_64.c:36:9, @@ -1378,7 +1439,7 @@ src/sw_stats_scan_sse2_128_64.c:378:17: note: 'vHtL' was declared here 378 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_32.o In file included from src/sg_stats_scan_sse2_128_16.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, @@ -1409,69 +1470,39 @@ src/sg_stats_scan_sse2_128_16.c:346:17: note: 'vHtL' was declared here 346 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse2_128_8.c:17: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, - inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:435:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': -src/sw_stats_scan_sse2_128_8.c:360:17: note: 'vHtM' was declared here - 360 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, - inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:436:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': -src/sw_stats_scan_sse2_128_8.c:361:17: note: 'vHtS' was declared here - 361 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:437:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': -src/sw_stats_scan_sse2_128_8.c:362:17: note: 'vHtL' was declared here - 362 | __m128i vHtL; - | ^~~~ -In file included from src/nw_stats_scan_sse2_128_8.c:16: +In file included from src/sg_stats_scan_sse2_128_8.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:440:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:365:17: note: 'vHtM' was declared here - 365 | __m128i vHtM; +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here + 387 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:441:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:366:17: note: 'vHtS' was declared here - 366 | __m128i vHtS; +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here + 388 | __m128i vHtS; | ^~~~ In function '_mm_adds_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:442:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:367:17: note: 'vHtL' was declared here - 367 | __m128i vHtL; +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here + 389 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_64.lo `test -f 'src/nw_trace_scan_sse2_128_64.c' || echo './'`src/nw_trace_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_64.lo `test -f 'src/sg_trace_scan_sse2_128_64.c' || echo './'`src/sg_trace_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_64.lo `test -f 'src/sw_trace_scan_sse2_128_64.c' || echo './'`src/sw_trace_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c In file included from src/sw_stats_scan_sse2_128_16.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, @@ -1502,265 +1533,259 @@ src/sw_stats_scan_sse2_128_16.c:318:17: note: 'vHtL' was declared here 318 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_32.lo `test -f 'src/nw_trace_scan_sse2_128_32.c' || echo './'`src/nw_trace_scan_sse2_128_32.c -In file included from src/nw_stats_scan_sse2_128_16.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:397:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:322:17: note: 'vHtM' was declared here - 322 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, - inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:398:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:323:17: note: 'vHtS' was declared here - 323 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi16', - inlined from 'parasail_nw_stats_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:399:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:324:17: note: 'vHtL' was declared here - 324 | __m128i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_32.lo `test -f 'src/sg_trace_scan_sse2_128_32.c' || echo './'`src/sg_trace_scan_sse2_128_32.c -In file included from src/sg_stats_scan_sse2_128_32.c:16: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c +In file included from src/nw_stats_scan_sse2_128_8.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:438:19: -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_64.o + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:440:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:363:17: note: 'vHtM' was declared here - 363 | __m128i vHtM; +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:365:17: note: 'vHtM' was declared here + 365 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:439:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, + inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:441:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:364:17: note: 'vHtS' was declared here - 364 | __m128i vHtS; +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:366:17: note: 'vHtS' was declared here + 366 | __m128i vHtS; | ^~~~ -In function '_mm_add_epi32', - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:440:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:365:17: note: 'vHtL' was declared here - 365 | __m128i vHtL; +In function '_mm_adds_epi8', + inlined from 'parasail_nw_stats_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:442:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:367:17: note: 'vHtL' was declared here + 367 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_32.lo `test -f 'src/sw_trace_scan_sse2_128_32.c' || echo './'`src/sw_trace_scan_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_16.lo `test -f 'src/nw_trace_scan_sse2_128_16.c' || echo './'`src/nw_trace_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_16.lo `test -f 'src/sg_trace_scan_sse2_128_16.c' || echo './'`src/sg_trace_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_16.lo `test -f 'src/sw_trace_scan_sse2_128_16.c' || echo './'`src/sw_trace_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_8.lo `test -f 'src/nw_trace_scan_sse2_128_8.c' || echo './'`src/nw_trace_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_8.lo `test -f 'src/sg_trace_scan_sse2_128_8.c' || echo './'`src/sg_trace_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_8.lo `test -f 'src/sw_trace_scan_sse2_128_8.c' || echo './'`src/sw_trace_scan_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_64.lo `test -f 'src/nw_trace_diag_sse2_128_64.c' || echo './'`src/nw_trace_diag_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_diag_sse2_128_64.lo `test -f 'src/sg_trace_diag_sse2_128_64.c' || echo './'`src/sg_trace_diag_sse2_128_64.c -In file included from src/sg_stats_scan_sse2_128_8.c:16: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_16.o +In file included from src/sw_stats_scan_sse2_128_8.c:17: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, + inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:435:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here - 387 | __m128i vHtM; +src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': +src/sw_stats_scan_sse2_128_8.c:360:17: note: 'vHtM' was declared here + 360 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, + inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:436:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here - 388 | __m128i vHtS; +src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': +src/sw_stats_scan_sse2_128_8.c:361:17: note: 'vHtS' was declared here + 361 | __m128i vHtS; | ^~~~ In function '_mm_adds_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: + inlined from 'parasail_sw_stats_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:437:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here - 389 | __m128i vHtL; +src/sw_stats_scan_sse2_128_8.c: In function 'parasail_sw_stats_scan_profile_sse2_128_8': +src/sw_stats_scan_sse2_128_8.c:362:17: note: 'vHtL' was declared here + 362 | __m128i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_64.lo `test -f 'src/nw_trace_scan_sse2_128_64.c' || echo './'`src/nw_trace_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_64.lo `test -f 'src/sg_trace_scan_sse2_128_64.c' || echo './'`src/sg_trace_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_stats_striped_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_stats_striped_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_stats_striped_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_64.lo `test -f 'src/sw_trace_scan_sse2_128_64.c' || echo './'`src/sw_trace_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_32.lo `test -f 'src/nw_trace_scan_sse2_128_32.c' || echo './'`src/nw_trace_scan_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_32.lo `test -f 'src/sg_trace_scan_sse2_128_32.c' || echo './'`src/sg_trace_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_32.lo `test -f 'src/sw_trace_scan_sse2_128_32.c' || echo './'`src/sw_trace_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_16.lo `test -f 'src/nw_trace_scan_sse2_128_16.c' || echo './'`src/nw_trace_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_16.lo `test -f 'src/sg_trace_scan_sse2_128_16.c' || echo './'`src/sg_trace_scan_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_16.lo `test -f 'src/sw_trace_scan_sse2_128_16.c' || echo './'`src/sw_trace_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_scan_sse2_128_8.lo `test -f 'src/nw_trace_scan_sse2_128_8.c' || echo './'`src/nw_trace_scan_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_scan_sse2_128_8.lo `test -f 'src/sg_trace_scan_sse2_128_8.c' || echo './'`src/sg_trace_scan_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_scan_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_scan_sse2_128_8.lo `test -f 'src/sw_trace_scan_sse2_128_8.c' || echo './'`src/sw_trace_scan_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_64.lo `test -f 'src/sw_trace_diag_sse2_128_64.c' || echo './'`src/sw_trace_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_64.lo `test -f 'src/nw_trace_diag_sse2_128_64.c' || echo './'`src/nw_trace_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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--mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_32.lo `test -f 'src/nw_trace_diag_sse2_128_32.c' || echo './'`src/nw_trace_diag_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_scan_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_scan_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_diag_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_32.lo `test -f 'src/sw_trace_diag_sse2_128_32.c' || echo './'`src/sw_trace_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_16.lo `test -f 'src/nw_trace_diag_sse2_128_16.c' || echo './'`src/nw_trace_diag_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_diag_sse2_128_16.lo `test -f 'src/sg_trace_diag_sse2_128_16.c' || echo './'`src/sg_trace_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_16.lo `test -f 'src/sw_trace_diag_sse2_128_16.c' || echo './'`src/sw_trace_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_8.lo `test -f 'src/nw_trace_diag_sse2_128_8.c' || echo './'`src/nw_trace_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_diag_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_diag_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_diag_sse2_128_8.lo `test -f 'src/sg_trace_diag_sse2_128_8.c' || echo './'`src/sg_trace_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_8.lo `test -f 'src/sw_trace_diag_sse2_128_8.c' || echo './'`src/sw_trace_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_diag_sse2_128_32.lo `test -f 'src/sg_trace_diag_sse2_128_32.c' || echo './'`src/sg_trace_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_32.lo `test -f 'src/sw_trace_diag_sse2_128_32.c' || echo './'`src/sw_trace_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_diag_sse2_128_16.lo `test -f 'src/nw_trace_diag_sse2_128_16.c' || echo './'`src/nw_trace_diag_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_diag_sse2_128_8.lo `test -f 'src/sg_trace_diag_sse2_128_8.c' || echo './'`src/sg_trace_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_diag_sse2_128_8.lo `test -f 'src/sw_trace_diag_sse2_128_8.c' || echo './'`src/sw_trace_diag_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_diag_sse2_128_16.o +/bin/sh 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-o src/libparasail_sse2_la-sw_trace_striped_sse2_128_64.lo `test -f 'src/sw_trace_striped_sse2_128_64.c' || echo './'`src/sw_trace_striped_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_striped_sse2_128_64.lo `test -f 'src/nw_trace_striped_sse2_128_64.c' || echo './'`src/nw_trace_striped_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_64.lo `test -f 'src/sg_trace_striped_sse2_128_64.c' || echo './'`src/sg_trace_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_striped_sse2_128_64.lo `test -f 'src/sw_trace_striped_sse2_128_64.c' || echo './'`src/sw_trace_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_striped_sse2_128_32.lo `test -f 'src/nw_trace_striped_sse2_128_32.c' || echo './'`src/nw_trace_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_striped_sse2_128_16.lo `test -f 'src/nw_trace_striped_sse2_128_16.c' || echo './'`src/nw_trace_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_32.lo `test -f 'src/sg_trace_striped_sse2_128_32.c' || echo './'`src/sg_trace_striped_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_16.lo `test -f 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-pedantic -c src/sw_trace_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_striped_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_striped_sse2_128_8.lo `test -f 'src/nw_trace_striped_sse2_128_8.c' || echo './'`src/nw_trace_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_8.lo `test -f 'src/sg_trace_striped_sse2_128_8.c' || echo './'`src/sg_trace_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_striped_sse2_128_8.lo `test -f 'src/sw_trace_striped_sse2_128_8.c' || echo './'`src/sw_trace_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_striped_sse2_128_32.lo `test -f 'src/sw_trace_striped_sse2_128_32.c' || echo './'`src/sw_trace_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_striped_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_striped_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_16.lo `test -f 'src/sg_trace_striped_sse2_128_16.c' || echo './'`src/sg_trace_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_striped_sse2_128_16.lo `test -f 'src/sw_trace_striped_sse2_128_16.c' || echo './'`src/sw_trace_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-nw_trace_striped_sse2_128_8.lo `test -f 'src/nw_trace_striped_sse2_128_8.c' || echo './'`src/nw_trace_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_striped_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_striped_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_64.lo `test -f 'src/nw_scan_sse2_128_64.c' || echo './'`src/nw_scan_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_64.lo `test -f 'src/sg_scan_sse2_128_64.c' || echo './'`src/sg_scan_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-nw_trace_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sg_trace_striped_sse2_128_8.lo `test -f 'src/sg_trace_striped_sse2_128_8.c' || echo './'`src/sg_trace_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_la-sw_trace_striped_sse2_128_8.lo `test -f 'src/sw_trace_striped_sse2_128_8.c' || echo './'`src/sw_trace_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_64.lo `test -f 'src/nw_scan_sse2_128_64.c' || echo './'`src/nw_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_64.lo `test -f 'src/sg_scan_sse2_128_64.c' || echo './'`src/sg_scan_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sg_trace_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_64.lo `test -f 'src/sw_scan_sse2_128_64.c' || echo './'`src/sw_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_32.lo `test -f 'src/nw_scan_sse2_128_32.c' || echo './'`src/nw_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_32.lo `test -f 'src/sg_scan_sse2_128_32.c' || echo './'`src/sg_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_32.lo `test -f 'src/sw_scan_sse2_128_32.c' || echo './'`src/sw_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_16.lo `test -f 'src/nw_scan_sse2_128_16.c' || echo './'`src/nw_scan_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_la-sw_trace_striped_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_scan_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_16.lo `test -f 'src/sg_scan_sse2_128_16.c' || echo './'`src/sg_scan_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_64.lo `test -f 'src/sw_scan_sse2_128_64.c' || echo './'`src/sw_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_32.lo `test -f 'src/nw_scan_sse2_128_32.c' || echo './'`src/nw_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_32.lo `test -f 'src/sg_scan_sse2_128_32.c' || echo './'`src/sg_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_32.lo `test -f 'src/sw_scan_sse2_128_32.c' || echo './'`src/sw_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_16.lo `test -f 'src/nw_scan_sse2_128_16.c' || echo './'`src/nw_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_16.lo `test -f 'src/sg_scan_sse2_128_16.c' || echo './'`src/sg_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_16.lo `test -f 'src/sw_scan_sse2_128_16.c' || echo './'`src/sw_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_16.lo `test -f 'src/sw_scan_sse2_128_16.c' || echo './'`src/sw_scan_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_scan_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_8.lo `test -f 'src/nw_scan_sse2_128_8.c' || echo './'`src/nw_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_8.lo `test -f 'src/sg_scan_sse2_128_8.c' || echo './'`src/sg_scan_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_scan_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_8.lo `test -f 'src/sw_scan_sse2_128_8.c' || echo './'`src/sw_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_64.lo `test -f 'src/nw_diag_sse2_128_64.c' || echo './'`src/nw_diag_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_scan_sse2_128_8.lo `test -f 'src/nw_scan_sse2_128_8.c' || echo './'`src/nw_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_scan_sse2_128_8.lo `test -f 'src/sg_scan_sse2_128_8.c' || echo './'`src/sg_scan_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_scan_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_64.lo `test -f 'src/sg_diag_sse2_128_64.c' || echo './'`src/sg_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_scan_sse2_128_8.lo `test -f 'src/sw_scan_sse2_128_8.c' || echo './'`src/sw_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_64.lo `test -f 'src/nw_diag_sse2_128_64.c' || echo './'`src/nw_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_64.lo `test -f 'src/sg_diag_sse2_128_64.c' || echo './'`src/sg_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_64.lo `test -f 'src/sw_diag_sse2_128_64.c' || echo './'`src/sw_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_64.lo `test -f 'src/sw_diag_sse2_128_64.c' || echo './'`src/sw_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_scan_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_scan_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_32.lo `test -f 'src/sg_diag_sse2_128_32.c' || echo './'`src/sg_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_32.lo `test -f 'src/sg_diag_sse2_128_32.c' || echo './'`src/sg_diag_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_32.lo `test -f 'src/sw_diag_sse2_128_32.c' || echo './'`src/sw_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_16.lo `test -f 'src/nw_diag_sse2_128_16.c' || echo './'`src/nw_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_16.lo `test -f 'src/sg_diag_sse2_128_16.c' || echo './'`src/sg_diag_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_diag_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_32.lo `test -f 'src/sw_diag_sse2_128_32.c' || echo './'`src/sw_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_16.lo `test -f 'src/nw_diag_sse2_128_16.c' || echo './'`src/nw_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_16.lo `test -f 'src/sg_diag_sse2_128_16.c' || echo './'`src/sg_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_16.lo `test -f 'src/sw_diag_sse2_128_16.c' || echo './'`src/sw_diag_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_diag_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_16.lo `test -f 'src/sw_diag_sse2_128_16.c' || echo './'`src/sw_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_8.lo `test -f 'src/nw_diag_sse2_128_8.c' || echo './'`src/nw_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_diag_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_diag_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_diag_sse2_128_8.lo `test -f 'src/nw_diag_sse2_128_8.c' || echo './'`src/nw_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_8.lo `test -f 'src/sg_diag_sse2_128_8.c' || echo './'`src/sg_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_8.lo `test -f 'src/sw_diag_sse2_128_8.c' || echo './'`src/sw_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_diag_sse2_128_8.lo `test -f 'src/sg_diag_sse2_128_8.c' || echo './'`src/sg_diag_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_diag_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_64.lo `test -f 'src/nw_striped_sse2_128_64.c' || echo './'`src/nw_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_diag_sse2_128_8.lo `test -f 'src/sw_diag_sse2_128_8.c' || echo './'`src/sw_diag_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_64.lo `test -f 'src/nw_striped_sse2_128_64.c' || echo './'`src/nw_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_64.lo `test -f 'src/sg_striped_sse2_128_64.c' || echo './'`src/sg_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_32.lo `test -f 'src/nw_striped_sse2_128_32.c' || echo './'`src/nw_striped_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_64.lo `test -f 'src/sg_striped_sse2_128_64.c' || echo './'`src/sg_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_32.lo `test -f 'src/nw_striped_sse2_128_32.c' || echo './'`src/nw_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_32.lo `test -f 'src/sg_striped_sse2_128_32.c' || echo './'`src/sg_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_32.lo `test -f 'src/sw_striped_sse2_128_32.c' || echo './'`src/sw_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_32.lo `test -f 'src/sw_striped_sse2_128_32.c' || echo './'`src/sw_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_16.lo `test -f 'src/nw_striped_sse2_128_16.c' || echo './'`src/nw_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_striped_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_16.lo `test -f 'src/nw_striped_sse2_128_16.c' || echo './'`src/nw_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_16.lo `test -f 'src/sg_striped_sse2_128_16.c' || echo './'`src/sg_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_striped_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_16.lo `test -f 'src/sg_striped_sse2_128_16.c' || echo './'`src/sg_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_16.lo `test -f 'src/sw_striped_sse2_128_16.c' || echo './'`src/sw_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_8.lo `test -f 'src/nw_striped_sse2_128_8.c' || echo './'`src/nw_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_8.lo `test -f 'src/sg_striped_sse2_128_8.c' || echo './'`src/sg_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_striped_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_striped_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_16.lo `test -f 'src/sw_striped_sse2_128_16.c' || echo './'`src/sw_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_striped_sse2_128_8.lo `test -f 'src/nw_striped_sse2_128_8.c' || echo './'`src/nw_striped_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_striped_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 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-I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_64.lo `test -f 'src/sw_stats_scan_sse2_128_64.c' || echo './'`src/sw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_striped_sse2_128_8.lo `test -f 'src/sg_striped_sse2_128_8.c' || echo './'`src/sg_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_64.lo `test -f 'src/sg_stats_scan_sse2_128_64.c' || echo './'`src/sg_stats_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_striped_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_32.lo `test -f 'src/nw_stats_scan_sse2_128_32.c' || echo './'`src/nw_stats_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_32.lo `test -f 'src/sg_stats_scan_sse2_128_32.c' || echo './'`src/sg_stats_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_32.lo `test -f 'src/sw_stats_scan_sse2_128_32.c' || echo './'`src/sw_stats_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_16.lo `test -f 'src/nw_stats_scan_sse2_128_16.c' || echo './'`src/nw_stats_scan_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_64.lo `test -f 'src/sw_stats_scan_sse2_128_64.c' || echo './'`src/sw_stats_scan_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_16.lo `test -f 'src/sg_stats_scan_sse2_128_16.c' || echo './'`src/sg_stats_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_32.lo `test -f 'src/nw_stats_scan_sse2_128_32.c' || echo './'`src/nw_stats_scan_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_16.lo `test -f 'src/sw_stats_scan_sse2_128_16.c' || echo './'`src/sw_stats_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_8.lo `test -f 'src/nw_stats_scan_sse2_128_8.c' || echo './'`src/nw_stats_scan_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_32.lo `test -f 'src/sg_stats_scan_sse2_128_32.c' || echo './'`src/sg_stats_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_32.lo `test -f 'src/sw_stats_scan_sse2_128_32.c' || echo './'`src/sw_stats_scan_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_16.lo `test -f 'src/nw_stats_scan_sse2_128_16.c' || echo './'`src/nw_stats_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_16.lo `test -f 'src/sg_stats_scan_sse2_128_16.c' || echo './'`src/sg_stats_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_16.lo `test -f 'src/sw_stats_scan_sse2_128_16.c' || echo './'`src/sw_stats_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_64.lo `test -f 'src/sw_stats_diag_sse2_128_64.c' || echo './'`src/sw_stats_diag_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_scan_sse2_128_8.lo `test -f 'src/nw_stats_scan_sse2_128_8.c' || echo './'`src/nw_stats_scan_sse2_128_8.c In file included from src/nw_stats_scan_sse2_128_64.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_64.c:35:9, @@ -1791,34 +1816,43 @@ src/nw_stats_scan_sse2_128_64.c:386:17: note: 'vHtL' was declared here 386 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_32.lo `test -f 'src/nw_stats_diag_sse2_128_32.c' || echo './'`src/nw_stats_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c +In file included from src/sg_stats_scan_sse2_128_64.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here + 417 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here + 418 | __m128i vHtS; + | ^~~~ +In function '_mm_add_epi64', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here + 419 | __m128i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_scan_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_scan_sse2_128_8.o In file included from src/sw_stats_scan_sse2_128_64.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_64.c:36:9, @@ -1849,70 +1883,8 @@ src/sw_stats_scan_sse2_128_64.c:378:17: note: 'vHtL' was declared here 378 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c -In file included from src/sg_stats_scan_sse2_128_8.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here - 387 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here - 388 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here - 389 | __m128i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_32.o -In file included from src/nw_stats_scan_sse2_128_8.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:440:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:365:17: note: 'vHtM' was declared here - 365 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:441:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:366:17: note: 'vHtS' was declared here - 366 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:442:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': -src/nw_stats_scan_sse2_128_8.c:367:17: note: 'vHtL' was declared here - 367 | __m128i vHtL; - | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_64.o In file included from src/nw_stats_scan_sse2_128_32.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, @@ -1943,41 +1915,75 @@ src/nw_stats_scan_sse2_128_32.c:343:17: note: 'vHtL' was declared here 343 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_16.o -In file included from src/sw_stats_scan_sse2_128_16.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_scan_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_64.lo `test -f 'src/sw_stats_diag_sse2_128_64.c' || echo './'`src/sw_stats_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_32.lo `test -f 'src/nw_stats_diag_sse2_128_32.c' || echo './'`src/nw_stats_diag_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_64.o +In file included from src/sg_stats_scan_sse2_128_16.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, - inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:391:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:419:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:316:17: note: 'vHtM' was declared here - 316 | __m128i vHtM; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:344:17: note: 'vHtM' was declared here + 344 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, - inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:392:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:420:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:317:17: note: 'vHtS' was declared here - 317 | __m128i vHtS; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:345:17: note: 'vHtS' was declared here + 345 | __m128i vHtS; | ^~~~ In function '_mm_adds_epi16', - inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:393:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:421:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:318:17: note: 'vHtL' was declared here - 318 | __m128i vHtL; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:346:17: note: 'vHtL' was declared here + 346 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c +In file included from src/nw_stats_scan_sse2_128_16.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:397:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:322:17: note: 'vHtM' was declared here + 322 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:398:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:323:17: note: 'vHtS' was declared here + 323 | __m128i vHtS; + | ^~~~ +In function '_mm_adds_epi16', + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:399:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': +src/nw_stats_scan_sse2_128_16.c:324:17: note: 'vHtL' was declared here + 324 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c In file included from src/sw_stats_scan_sse2_128_32.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, @@ -2008,8 +2014,43 @@ src/sw_stats_scan_sse2_128_32.c:336:17: note: 'vHtL' was declared here 336 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c +In file included from src/sw_stats_scan_sse2_128_16.c:17: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, + inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:391:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:316:17: note: 'vHtM' was declared here + 316 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, + inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:392:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:317:17: note: 'vHtS' was declared here + 317 | __m128i vHtS; + | ^~~~ +In function '_mm_adds_epi16', + inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:393:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:318:17: note: 'vHtL' was declared here + 318 | __m128i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_16.o In file included from src/sg_stats_scan_sse2_128_32.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, @@ -2040,109 +2081,45 @@ src/sg_stats_scan_sse2_128_32.c:365:17: note: 'vHtL' was declared here 365 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_16.o -In file included from src/sg_stats_scan_sse2_128_16.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:419:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:344:17: note: 'vHtM' was declared here - 344 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:420:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:345:17: note: 'vHtS' was declared here - 345 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi16', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:421:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:346:17: note: 'vHtL' was declared here - 346 | __m128i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_8.o -In file included from src/sg_stats_scan_sse2_128_64.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here - 417 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here - 418 | __m128i vHtS; - | ^~~~ -In function '_mm_add_epi64', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here - 419 | __m128i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_64.lo `test -f 'src/nw_scan_sse2_128_64.c' || echo './'`src/nw_scan_sse2_128_64.c -In file included from src/nw_stats_scan_sse2_128_16.c:16: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c +In file included from src/nw_stats_scan_sse2_128_8.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:397:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:440:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:322:17: note: 'vHtM' was declared here - 322 | __m128i vHtM; +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:365:17: note: 'vHtM' was declared here + 365 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:398:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_8.c:25:9, + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:441:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:323:17: note: 'vHtS' was declared here - 323 | __m128i vHtS; +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:366:17: note: 'vHtS' was declared here + 366 | __m128i vHtS; | ^~~~ -In function '_mm_adds_epi16', - inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_16' at src/nw_stats_scan_sse2_128_16.c:399:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_16.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_16': -src/nw_stats_scan_sse2_128_16.c:324:17: note: 'vHtL' was declared here - 324 | __m128i vHtL; +In function '_mm_adds_epi8', + inlined from 'parasail_nw_stats_table_scan_profile_sse2_128_8' at src/nw_stats_scan_sse2_128_8.c:442:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse2_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse2_128_8': +src/nw_stats_scan_sse2_128_8.c:367:17: note: 'vHtL' was declared here + 367 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_64.lo `test -f 'src/sg_scan_sse2_128_64.c' || echo './'`src/sg_scan_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_scan_sse2_128_64.o In file included from src/sw_stats_scan_sse2_128_8.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, inlined from 'parasail_sw_stats_table_scan_profile_sse2_128_8' at src/sw_stats_scan_sse2_128_8.c:435:19: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2169,113 +2146,219 @@ src/sw_stats_scan_sse2_128_8.c:362:17: note: 'vHtL' was declared here 362 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_64.lo `test -f 'src/sw_scan_sse2_128_64.c' || echo './'`src/sw_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_32.lo `test -f 'src/nw_scan_sse2_128_32.c' || echo './'`src/nw_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_32.lo `test -f 'src/sg_scan_sse2_128_32.c' || echo './'`src/sg_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_32.lo `test -f 'src/sw_scan_sse2_128_32.c' || echo './'`src/sw_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_16.lo `test -f 'src/nw_scan_sse2_128_16.c' || echo './'`src/nw_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_16.lo `test -f 'src/sg_scan_sse2_128_16.c' || echo './'`src/sg_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_16.lo `test -f 'src/sw_scan_sse2_128_16.c' || echo './'`src/sw_scan_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_diag_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_diag_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_64.o +In file included from src/sg_stats_scan_sse2_128_8.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here + 387 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here + 388 | __m128i vHtS; + | ^~~~ +In function '_mm_adds_epi8', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here + 389 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-nw_stats_striped_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sg_stats_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_table_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_64.lo `test -f 'src/nw_scan_sse2_128_64.c' || echo './'`src/nw_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_table_la-sw_stats_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_64.lo `test -f 'src/sg_scan_sse2_128_64.c' || echo './'`src/sg_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_64.lo `test -f 'src/sw_scan_sse2_128_64.c' || echo './'`src/sw_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_scan_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_32.lo `test -f 'src/nw_scan_sse2_128_32.c' || echo './'`src/nw_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_32.lo `test -f 'src/sg_scan_sse2_128_32.c' || echo './'`src/sg_scan_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_scan_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_scan_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_32.lo `test -f 'src/sw_scan_sse2_128_32.c' || echo './'`src/sw_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_scan_sse2_128_16.lo `test -f 'src/nw_scan_sse2_128_16.c' || echo './'`src/nw_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_scan_sse2_128_16.lo `test -f 'src/sg_scan_sse2_128_16.c' || echo './'`src/sg_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_scan_sse2_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_scan_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_scan_sse2_128_16.lo `test -f 'src/sw_scan_sse2_128_16.c' || echo './'`src/sw_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong 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-DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_64.lo `test -f 'src/nw_diag_sse2_128_64.c' || echo './'`src/nw_diag_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_64.lo `test -f 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-pedantic -c src/sw_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_64.lo `test -f 'src/nw_diag_sse2_128_64.c' || echo './'`src/nw_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_64.lo `test -f 'src/sg_diag_sse2_128_64.c' || echo './'`src/sg_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_scan_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_64.lo `test -f 'src/sw_diag_sse2_128_64.c' || echo './'`src/sw_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_scan_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_diag_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_32.lo `test -f 'src/nw_diag_sse2_128_32.c' || echo './'`src/nw_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src 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compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_diag_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_32.lo `test -f 'src/sg_diag_sse2_128_32.c' || echo './'`src/sg_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_32.lo `test -f 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src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_16.lo `test -f 'src/nw_diag_sse2_128_16.c' || echo './'`src/nw_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_16.lo `test -f 'src/sg_diag_sse2_128_16.c' || echo './'`src/sg_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_16.lo `test -f 'src/nw_diag_sse2_128_16.c' || echo './'`src/nw_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_16.lo `test -f 'src/sg_diag_sse2_128_16.c' || echo './'`src/sg_diag_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_16.lo `test -f 'src/sw_diag_sse2_128_16.c' || echo './'`src/sw_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_8.lo `test -f 'src/nw_diag_sse2_128_8.c' || echo './'`src/nw_diag_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_diag_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_16.lo `test -f 'src/sw_diag_sse2_128_16.c' || echo './'`src/sw_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_diag_sse2_128_8.lo `test -f 'src/nw_diag_sse2_128_8.c' || echo './'`src/nw_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_8.lo `test -f 'src/sg_diag_sse2_128_8.c' || echo './'`src/sg_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_8.lo `test -f 'src/sw_diag_sse2_128_8.c' || echo './'`src/sw_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_64.lo `test -f 'src/nw_striped_sse2_128_64.c' || echo './'`src/nw_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_64.lo `test -f 'src/sg_striped_sse2_128_64.c' || echo './'`src/sg_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_diag_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_diag_sse2_128_8.lo `test -f 'src/sg_diag_sse2_128_8.c' || echo './'`src/sg_diag_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_diag_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_32.lo `test -f 'src/nw_striped_sse2_128_32.c' || echo './'`src/nw_striped_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_diag_sse2_128_8.lo `test -f 'src/sw_diag_sse2_128_8.c' || echo './'`src/sw_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_diag_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_diag_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_64.lo `test -f 'src/nw_striped_sse2_128_64.c' || echo './'`src/nw_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_64.lo `test -f 'src/sg_striped_sse2_128_64.c' || echo './'`src/sg_striped_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_32.lo `test -f 'src/sg_striped_sse2_128_32.c' || echo './'`src/sg_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_64.lo `test -f 'src/sw_striped_sse2_128_64.c' || echo './'`src/sw_striped_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_32.lo `test -f 'src/nw_striped_sse2_128_32.c' || echo './'`src/nw_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_32.lo `test -f 'src/sg_striped_sse2_128_32.c' || echo './'`src/sg_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_32.lo `test -f 'src/sw_striped_sse2_128_32.c' || echo './'`src/sw_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_16.lo `test -f 'src/nw_striped_sse2_128_16.c' || echo './'`src/nw_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_striped_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_16.lo `test -f 'src/sg_striped_sse2_128_16.c' || echo './'`src/sg_striped_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_32.lo `test -f 'src/sw_striped_sse2_128_32.c' || echo './'`src/sw_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_16.lo `test -f 'src/nw_striped_sse2_128_16.c' || echo './'`src/nw_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_16.lo `test -f 'src/sg_striped_sse2_128_16.c' || echo './'`src/sg_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_8.lo `test -f 'src/sg_striped_sse2_128_8.c' || echo './'`src/sg_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_16.lo `test -f 'src/sw_striped_sse2_128_16.c' || echo './'`src/sw_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_striped_sse2_128_8.lo `test -f 'src/nw_striped_sse2_128_8.c' || echo './'`src/nw_striped_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_64.lo `test -f 'src/sg_stats_scan_sse2_128_64.c' || echo './'`src/sg_stats_scan_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_striped_sse2_128_8.lo `test -f 'src/sg_striped_sse2_128_8.c' || echo './'`src/sg_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_striped_sse2_128_8.lo `test -f 'src/sw_striped_sse2_128_8.c' || echo './'`src/sw_striped_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_64.lo `test -f 'src/sw_stats_scan_sse2_128_64.c' || echo './'`src/sw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_64.lo `test -f 'src/nw_stats_scan_sse2_128_64.c' || echo './'`src/nw_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_64.lo `test -f 'src/sg_stats_scan_sse2_128_64.c' || echo './'`src/sg_stats_scan_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_64.lo `test -f 'src/sw_stats_scan_sse2_128_64.c' || echo './'`src/sw_stats_scan_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration 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-DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_32.lo `test -f 'src/sg_stats_scan_sse2_128_32.c' || echo './'`src/sg_stats_scan_sse2_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_32.lo `test -f 'src/nw_stats_scan_sse2_128_32.c' || echo './'`src/nw_stats_scan_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_32.lo `test -f 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-Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_32.lo `test -f 'src/sw_stats_scan_sse2_128_32.c' || echo './'`src/sw_stats_scan_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_16.lo `test -f 'src/nw_stats_scan_sse2_128_16.c' || echo './'`src/nw_stats_scan_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_16.lo `test -f 'src/sg_stats_scan_sse2_128_16.c' || echo './'`src/sg_stats_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_16.lo `test -f 'src/nw_stats_scan_sse2_128_16.c' || echo './'`src/nw_stats_scan_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_16.lo `test -f 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-Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_8.lo `test -f 'src/nw_stats_scan_sse2_128_8.c' || echo './'`src/nw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_16.lo `test -f 'src/sw_stats_scan_sse2_128_16.c' || echo './'`src/sw_stats_scan_sse2_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_8.lo `test -f 'src/nw_stats_scan_sse2_128_8.c' || echo './'`src/nw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_8.lo `test -f 'src/sg_stats_scan_sse2_128_8.c' || echo './'`src/sg_stats_scan_sse2_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_8.lo `test -f 'src/sw_stats_scan_sse2_128_8.c' || echo './'`src/sw_stats_scan_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_64.lo `test -f 'src/nw_stats_diag_sse2_128_64.c' || echo './'`src/nw_stats_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_scan_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_64.lo `test -f 'src/sw_stats_diag_sse2_128_64.c' || echo './'`src/sw_stats_diag_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_32.lo `test -f 'src/nw_stats_diag_sse2_128_32.c' || echo './'`src/nw_stats_diag_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c +In file included from src/sg_stats_scan_sse2_128_64.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here + 417 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here + 418 | __m128i vHtS; + | ^~~~ +In function '_mm_add_epi64', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': +src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here + 419 | __m128i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_scan_sse2_128_8.o +In file included from src/sg_stats_scan_sse2_128_32.c:16: +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:438:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:363:17: note: 'vHtM' was declared here + 363 | __m128i vHtM; + | ^~~~ +In function '_mm_andnot_si128', + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:439:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:364:17: note: 'vHtS' was declared here + 364 | __m128i vHtS; + | ^~~~ +In function '_mm_add_epi32', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:440:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': +src/sg_stats_scan_sse2_128_32.c:365:17: note: 'vHtL' was declared here + 365 | __m128i vHtL; + | ^~~~ In file included from src/nw_stats_scan_sse2_128_64.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_64.c:35:9, @@ -2299,6 +2382,7 @@ | ^~~~ In function '_mm_add_epi64', inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_64' at src/nw_stats_scan_sse2_128_64.c:461:19: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_64.lo `test -f 'src/sg_stats_diag_sse2_128_64.c' || echo './'`src/sg_stats_diag_sse2_128_64.c /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); | ^~~~~~~~~~~ @@ -2306,9 +2390,7 @@ src/nw_stats_scan_sse2_128_64.c:386:17: note: 'vHtL' was declared here 386 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_64.lo `test -f 'src/sw_stats_diag_sse2_128_64.c' || echo './'`src/sw_stats_diag_sse2_128_64.c In file included from src/sw_stats_scan_sse2_128_64.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_64.c:36:9, @@ -2339,92 +2421,44 @@ src/sw_stats_scan_sse2_128_64.c:378:17: note: 'vHtL' was declared here 378 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c -In file included from src/sg_stats_scan_sse2_128_64.c:16: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_32.lo `test -f 'src/nw_stats_diag_sse2_128_32.c' || echo './'`src/nw_stats_diag_sse2_128_32.c +In file included from src/nw_stats_scan_sse2_128_32.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:492:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:416:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:417:17: note: 'vHtM' was declared here - 417 | __m128i vHtM; +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:341:17: note: 'vHtM' was declared here + 341 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_64.c:40:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:493:19: + inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:417:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:418:17: note: 'vHtS' was declared here - 418 | __m128i vHtS; +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:342:17: note: 'vHtS' was declared here + 342 | __m128i vHtS; | ^~~~ -In function '_mm_add_epi64', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64' at src/sg_stats_scan_sse2_128_64.c:494:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); +In function '_mm_add_epi32', + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:418:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse2_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_64': -src/sg_stats_scan_sse2_128_64.c:419:17: note: 'vHtL' was declared here - 419 | __m128i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_32.o -In file included from src/sg_stats_scan_sse2_128_32.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:438:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:363:17: note: 'vHtM' was declared here - 363 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_32.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:439:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:364:17: note: 'vHtS' was declared here - 364 | __m128i vHtS; +src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': +src/nw_stats_scan_sse2_128_32.c:343:17: note: 'vHtL' was declared here + 343 | __m128i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_32.lo `test -f 'src/sg_stats_diag_sse2_128_32.c' || echo './'`src/sg_stats_diag_sse2_128_32.c In file included from src/sw_stats_scan_sse2_128_32.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_32.c:26:9, inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_32' at src/sw_stats_scan_sse2_128_32.c:409:19: -In function '_mm_add_epi32', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32' at src/sg_stats_scan_sse2_128_32.c:440:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_sse2_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_32': -src/sg_stats_scan_sse2_128_32.c:365:17: note: 'vHtL' was declared here - 365 | __m128i vHtL; - | ^~~~ /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2451,42 +2485,41 @@ src/sw_stats_scan_sse2_128_32.c:336:17: note: 'vHtL' was declared here 336 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_16.o -In file included from src/nw_stats_scan_sse2_128_32.c:16: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_32.lo `test -f 'src/sw_stats_diag_sse2_128_32.c' || echo './'`src/sw_stats_diag_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_16.lo `test -f 'src/nw_stats_diag_sse2_128_16.c' || echo './'`src/nw_stats_diag_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_16.lo `test -f 'src/sg_stats_diag_sse2_128_16.c' || echo './'`src/sg_stats_diag_sse2_128_16.c +In file included from src/sg_stats_scan_sse2_128_8.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:416:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:341:17: note: 'vHtM' was declared here - 341 | __m128i vHtM; +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here + 387 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_32.c:25:9, - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:417:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:342:17: note: 'vHtS' was declared here - 342 | __m128i vHtS; +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here + 388 | __m128i vHtS; | ^~~~ -In function '_mm_add_epi32', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32' at src/nw_stats_scan_sse2_128_32.c:418:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_sse2_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse2_128_32': -src/nw_stats_scan_sse2_128_32.c:343:17: note: 'vHtL' was declared here - 343 | __m128i vHtL; +In function '_mm_adds_epi8', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': +src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here + 389 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_16.lo `test -f 'src/sw_stats_diag_sse2_128_16.c' || echo './'`src/sw_stats_diag_sse2_128_16.c In file included from src/nw_stats_scan_sse2_128_16.c:16: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/nw_stats_scan_sse2_128_16.c:25:9, @@ -2517,35 +2550,38 @@ src/nw_stats_scan_sse2_128_16.c:324:17: note: 'vHtL' was declared here 324 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse2_128_16.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_8.lo `test -f 'src/nw_stats_diag_sse2_128_8.c' || echo './'`src/nw_stats_diag_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_8.lo `test -f 'src/sg_stats_diag_sse2_128_8.c' || echo './'`src/sg_stats_diag_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_32.o +In file included from src/sg_stats_scan_sse2_128_16.c:16: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:391:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:419:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:316:17: note: 'vHtM' was declared here - 316 | __m128i vHtM; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:344:17: note: 'vHtM' was declared here + 344 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:392:19: + inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:420:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:317:17: note: 'vHtS' was declared here - 317 | __m128i vHtS; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:345:17: note: 'vHtS' was declared here + 345 | __m128i vHtS; | ^~~~ In function '_mm_adds_epi16', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:393:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:421:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': -src/sw_stats_scan_sse2_128_16.c:318:17: note: 'vHtL' was declared here - 318 | __m128i vHtL; +src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': +src/sg_stats_scan_sse2_128_16.c:346:17: note: 'vHtL' was declared here + 346 | __m128i vHtL; | ^~~~ In file included from src/nw_stats_scan_sse2_128_8.c:16: In function '_mm_andnot_si128', @@ -2577,71 +2613,43 @@ src/nw_stats_scan_sse2_128_8.c:367:17: note: 'vHtL' was declared here 367 | __m128i vHtL; | ^~~~ -In file included from src/sg_stats_scan_sse2_128_16.c:16: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_diag_sse2_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_diag_sse2_128_8.o +In file included from src/sw_stats_scan_sse2_128_16.c:17: In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:419:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:391:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:344:17: note: 'vHtM' was declared here - 344 | __m128i vHtM; +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:316:17: note: 'vHtM' was declared here + 316 | __m128i vHtM; | ^~~~ In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_16.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:420:19: + inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_16.c:26:9, + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:392:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:345:17: note: 'vHtS' was declared here - 345 | __m128i vHtS; +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:317:17: note: 'vHtS' was declared here + 317 | __m128i vHtS; | ^~~~ In function '_mm_adds_epi16', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16' at src/sg_stats_scan_sse2_128_16.c:421:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16' at src/sw_stats_scan_sse2_128_16.c:393:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_16': -src/sg_stats_scan_sse2_128_16.c:346:17: note: 'vHtL' was declared here - 346 | __m128i vHtL; - | ^~~~ -In file included from src/sg_stats_scan_sse2_128_8.c:16: -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:462:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:387:17: note: 'vHtM' was declared here - 387 | __m128i vHtM; - | ^~~~ -In function '_mm_andnot_si128', - inlined from '_mm_blendv_epi8_rpl' at src/sg_stats_scan_sse2_128_8.c:30:9, - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:463:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1323:19: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 1323 | return (__m128i)__builtin_ia32_pandn128 ((__v2di)__A, (__v2di)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:388:17: note: 'vHtS' was declared here - 388 | __m128i vHtS; - | ^~~~ -In function '_mm_adds_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8' at src/sg_stats_scan_sse2_128_8.c:464:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse2_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse2_128_8': -src/sg_stats_scan_sse2_128_8.c:389:17: note: 'vHtL' was declared here - 389 | __m128i vHtL; +src/sw_stats_scan_sse2_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse2_128_16': +src/sw_stats_scan_sse2_128_16.c:318:17: note: 'vHtL' was declared here + 318 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_8.lo `test -f 'src/sw_stats_diag_sse2_128_8.c' || echo './'`src/sw_stats_diag_sse2_128_8.c In file included from src/sw_stats_scan_sse2_128_8.c:17: In function '_mm_andnot_si128', inlined from '_mm_blendv_epi8_rpl' at src/sw_stats_scan_sse2_128_8.c:26:9, @@ -2672,123 +2680,130 @@ src/sw_stats_scan_sse2_128_8.c:362:17: note: 'vHtL' was declared here 362 | __m128i vHtL; | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_64.lo `test -f 'src/nw_stats_striped_sse2_128_64.c' || echo './'`src/nw_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_64.lo `test -f 'src/sg_stats_striped_sse2_128_64.c' || echo './'`src/sg_stats_striped_sse2_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_diag_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_64.lo `test -f 'src/sw_stats_striped_sse2_128_64.c' || echo './'`src/sw_stats_striped_sse2_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_32.lo `test -f 'src/nw_stats_striped_sse2_128_32.c' || echo './'`src/nw_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_32.lo `test -f 'src/sg_stats_striped_sse2_128_32.c' || echo './'`src/sg_stats_striped_sse2_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_32.lo `test -f 'src/sw_stats_striped_sse2_128_32.c' || echo './'`src/sw_stats_striped_sse2_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_16.lo `test -f 'src/nw_stats_striped_sse2_128_16.c' || echo './'`src/nw_stats_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_16.lo `test -f 'src/sg_stats_striped_sse2_128_16.c' || echo './'`src/sg_stats_striped_sse2_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_16.lo `test -f 'src/sw_stats_striped_sse2_128_16.c' || echo './'`src/sw_stats_striped_sse2_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_8.lo `test -f 'src/nw_stats_striped_sse2_128_8.c' || echo './'`src/nw_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_8.lo `test -f 'src/sg_stats_striped_sse2_128_8.c' || echo './'`src/sg_stats_striped_sse2_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_8.lo `test -f 'src/sw_stats_striped_sse2_128_8.c' || echo './'`src/sw_stats_striped_sse2_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-nw_stats_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sg_stats_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse2_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse2_rowcol_la-sw_stats_striped_sse2_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_scan_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_scan_sse41_128_32.lo `test -f 'src/sg_scan_sse41_128_32.c' || echo './'`src/sg_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_diag_sse41_128_16.lo `test -f 'src/sw_diag_sse41_128_16.c' || echo './'`src/sw_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_32.c -fPIC -DPIC -o 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-fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_blocked_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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+/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_scan_sse41_128_32.lo `test -f 'src/sw_stats_scan_sse41_128_32.c' || echo './'`src/sw_stats_scan_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_scan_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_32.c -fPIC -DPIC -o 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_scan_sse41_128_16.lo `test -f 'src/sw_stats_scan_sse41_128_16.c' || echo './'`src/sw_stats_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_scan_sse41_128_8.lo `test -f 'src/nw_stats_scan_sse41_128_8.c' || echo './'`src/nw_stats_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_scan_sse41_128_8.lo `test -f 'src/sg_stats_scan_sse41_128_8.c' || echo './'`src/sg_stats_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time 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-I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_scan_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo 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src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c -In file included from src/sg_stats_scan_sse41_128_32.c:17: +In file included from src/sw_stats_scan_sse41_128_64.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:444:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2796,12 +2811,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here - 331 | __m128i vHtM; +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:369:17: note: 'vHtM' was declared here + 369 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:445:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2809,68 +2824,32 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here - 332 | __m128i vHtS; +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:370:17: note: 'vHtS' was declared here + 370 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_32.c:16: -In function '_mm_add_epi32', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); +In file included from src/sw_stats_scan_sse41_128_64.c:17: +In function '_mm_add_epi64', + inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:446:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here - 333 | __m128i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c -In file included from src/sg_stats_scan_sse41_128_8.c:17: -In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:430:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:355:17: note: 'vHtM' was declared here - 355 | __m128i vHtM; - | ^~~~ -In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:431:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:356:17: note: 'vHtS' was declared here - 356 | __m128i vHtS; - | ^~~~ -In file included from src/sg_stats_scan_sse41_128_8.c:16: -In function '_mm_adds_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:432:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:357:17: note: 'vHtL' was declared here - 357 | __m128i vHtL; +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:371:17: note: 'vHtL' was declared here + 371 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_64.lo `test -f 'src/nw_stats_diag_sse41_128_64.c' || echo './'`src/nw_stats_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_scan_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_32.lo `test -f 'src/sg_stats_diag_sse41_128_32.c' || echo './'`src/sg_stats_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_32.lo `test -f 'src/sw_stats_diag_sse41_128_32.c' || echo './'`src/sw_stats_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_64.o In file included from src/nw_stats_scan_sse41_128_64.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_nw_stats_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:452:19: @@ -2908,23 +2887,12 @@ src/nw_stats_scan_sse41_128_64.c:379:17: note: 'vHtL' was declared here 379 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_16.lo `test -f 'src/nw_stats_striped_sse41_128_16.c' || echo './'`src/nw_stats_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_16.lo `test -f 'src/sg_stats_striped_sse41_128_16.c' || echo './'`src/sg_stats_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_64.lo `test -f 'src/nw_trace_scan_sse41_128_64.c' || echo './'`src/nw_trace_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_64.lo `test -f 'src/sg_trace_scan_sse41_128_64.c' || echo './'`src/sg_trace_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_scan_sse41_128_64.lo `test -f 'src/sw_trace_scan_sse41_128_64.c' || echo './'`src/sw_trace_scan_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_64.o -In file included from src/nw_stats_scan_sse41_128_16.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_32.o +In file included from src/sw_stats_scan_sse41_128_32.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:392:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2932,13 +2900,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:317:17: note: 'vHtM' was declared here - 317 | __m128i vHtM; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here + 302 | __m128i vHtM; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_32.o In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:393:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2946,25 +2913,27 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:318:17: note: 'vHtS' was declared here - 318 | __m128i vHtS; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here + 303 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_16.c:16: -In function '_mm_adds_epi16', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:394:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:319:17: note: 'vHtL' was declared here - 319 | __m128i vHtL; +In file included from src/sw_stats_scan_sse41_128_32.c:17: +In function '_mm_add_epi32', + inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here + 304 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_16.o -In file included from src/nw_stats_scan_sse41_128_8.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo './'`src/sg_stats_diag_sse41_128_16.c +In file included from src/sg_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:408:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2972,12 +2941,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:333:17: note: 'vHtM' was declared here - 333 | __m128i vHtM; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here + 331 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:409:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2985,30 +2954,23 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:334:17: note: 'vHtS' was declared here - 334 | __m128i vHtS; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here + 332 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_8.c:16: -In function '_mm_adds_epi8', - inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:410:19: -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_8.o -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:335:17: note: 'vHtL' was declared here - 335 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_32.c:16: +In function '_mm_add_epi32', + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here + 333 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_8.o -In file included from src/sw_stats_scan_sse41_128_16.c:18: +In file included from src/sg_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3016,12 +2978,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here - 311 | __m128i vHtM; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here + 339 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3029,23 +2991,21 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here - 312 | __m128i vHtS; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here + 340 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_16.c:17: +In file included from src/sg_stats_scan_sse41_128_16.c:16: In function '_mm_adds_epi16', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here - 313 | __m128i vHtL; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here + 341 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_32.lo `test -f 'src/nw_trace_scan_sse41_128_32.c' || echo './'`src/nw_trace_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_16.lo `test -f 'src/sw_stats_diag_sse41_128_16.c' || echo './'`src/sw_stats_diag_sse41_128_16.c In file included from src/nw_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_nw_stats_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:384:19: @@ -3120,9 +3080,9 @@ src/sg_stats_scan_sse41_128_64.c:412:17: note: 'vHtL' was declared here 412 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_32.c:18: +In file included from src/sg_stats_scan_sse41_128_8.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:430:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3130,12 +3090,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here - 302 | __m128i vHtM; +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:355:17: note: 'vHtM' was declared here + 355 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:431:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3143,23 +3103,24 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here - 303 | __m128i vHtS; +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:356:17: note: 'vHtS' was declared here + 356 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_32.c:17: -In function '_mm_add_epi32', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here - 304 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_8.c:16: +In function '_mm_adds_epi8', + inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:432:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:357:17: note: 'vHtL' was declared here + 357 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_64.c:18: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_16.o +In file included from src/nw_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:444:19: + inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:392:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3167,12 +3128,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': -src/sw_stats_scan_sse41_128_64.c:369:17: note: 'vHtM' was declared here - 369 | __m128i vHtM; +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:317:17: note: 'vHtM' was declared here + 317 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:445:19: + inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:393:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3180,23 +3141,22 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': -src/sw_stats_scan_sse41_128_64.c:370:17: note: 'vHtS' was declared here - 370 | __m128i vHtS; +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:318:17: note: 'vHtS' was declared here + 318 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_64.c:17: -In function '_mm_add_epi64', - inlined from 'parasail_sw_stats_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:446:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_scan_profile_sse41_128_64': -src/sw_stats_scan_sse41_128_64.c:371:17: note: 'vHtL' was declared here - 371 | __m128i vHtL; +In file included from src/nw_stats_scan_sse41_128_16.c:16: +In function '_mm_adds_epi16', + inlined from 'parasail_nw_stats_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:394:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:319:17: note: 'vHtL' was declared here + 319 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_32.lo `test -f 'src/sg_trace_scan_sse41_128_32.c' || echo './'`src/sg_trace_scan_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_scan_sse41_128_32.lo `test -f 'src/sw_trace_scan_sse41_128_32.c' || echo './'`src/sw_trace_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c In file included from src/sw_stats_scan_sse41_128_8.c:18: In function '_mm_blendv_epi8', inlined from 'parasail_sw_stats_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:403:19: @@ -3234,10 +3194,10 @@ src/sw_stats_scan_sse41_128_8.c:330:17: note: 'vHtL' was declared here 330 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_16.lo `test -f 'src/nw_trace_scan_sse41_128_16.c' || echo './'`src/nw_trace_scan_sse41_128_16.c -In file included from src/sg_stats_scan_sse41_128_16.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c +In file included from src/sw_stats_scan_sse41_128_16.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3245,13 +3205,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_16.lo `test -f 'src/sg_trace_scan_sse41_128_16.c' || echo './'`src/sg_trace_scan_sse41_128_16.c -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here - 339 | __m128i vHtM; +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here + 311 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3259,192 +3218,259 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here - 340 | __m128i vHtS; +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here + 312 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_16.c:16: +In file included from src/sw_stats_scan_sse41_128_16.c:17: In function '_mm_adds_epi16', - inlined from 'parasail_sg_flags_stats_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: + inlined from 'parasail_sw_stats_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here - 341 | __m128i vHtL; +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here + 313 | __m128i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c +In file included from src/nw_stats_scan_sse41_128_8.c:17: +In function '_mm_blendv_epi8', + inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:333:17: note: 'vHtM' was declared here + 333 | __m128i vHtM; + | ^~~~ +In function '_mm_blendv_epi8', + inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:409:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:334:17: note: 'vHtS' was declared here + 334 | __m128i vHtS; + | ^~~~ +In file included from src/nw_stats_scan_sse41_128_8.c:16: +In function '_mm_adds_epi8', + inlined from 'parasail_nw_stats_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:410:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:335:17: note: 'vHtL' was declared here + 335 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 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gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_stats_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_64.lo `test -f 'src/nw_trace_scan_sse41_128_64.c' || echo './'`src/nw_trace_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_64.lo `test -f 'src/sg_trace_scan_sse41_128_64.c' || echo './'`src/sg_trace_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_scan_sse41_128_64.lo `test -f 'src/sw_trace_scan_sse41_128_64.c' || echo './'`src/sw_trace_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_stats_striped_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_scan_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_stats_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_32.lo `test -f 'src/nw_trace_scan_sse41_128_32.c' || echo './'`src/nw_trace_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_32.lo `test -f 'src/sg_trace_scan_sse41_128_32.c' || echo './'`src/sg_trace_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_scan_sse41_128_32.lo `test -f 'src/sw_trace_scan_sse41_128_32.c' || echo './'`src/sw_trace_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_16.lo `test -f 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-pedantic -c src/sw_trace_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_scan_sse41_128_16.lo `test -f 'src/sw_trace_scan_sse41_128_16.c' || echo './'`src/sw_trace_scan_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_scan_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_8.lo `test -f 'src/nw_trace_scan_sse41_128_8.c' || echo './'`src/nw_trace_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration 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-I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_scan_sse41_128_8.lo `test -f 'src/nw_trace_scan_sse41_128_8.c' || echo './'`src/nw_trace_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_scan_sse41_128_8.lo `test -f 'src/sg_trace_scan_sse41_128_8.c' || echo './'`src/sg_trace_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_scan_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_diag_sse41_128_64.lo `test -f 'src/nw_trace_diag_sse41_128_64.c' || echo './'`src/nw_trace_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_diag_sse41_128_64.lo `test -f 'src/sg_trace_diag_sse41_128_64.c' || echo './'`src/sg_trace_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_diag_sse41_128_64.lo `test -f 'src/sg_trace_diag_sse41_128_64.c' || echo './'`src/sg_trace_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_scan_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_diag_sse41_128_64.lo `test -f 'src/sw_trace_diag_sse41_128_64.c' || echo './'`src/sw_trace_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_diag_sse41_128_32.lo `test -f 'src/nw_trace_diag_sse41_128_32.c' || echo './'`src/nw_trace_diag_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_scan_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_diag_sse41_128_64.lo `test -f 'src/sw_trace_diag_sse41_128_64.c' || echo './'`src/sw_trace_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_diag_sse41_128_32.lo `test -f 'src/nw_trace_diag_sse41_128_32.c' || echo './'`src/nw_trace_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_diag_sse41_128_32.lo `test -f 'src/sg_trace_diag_sse41_128_32.c' || echo './'`src/sg_trace_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_diag_sse41_128_8.lo `test -f 'src/nw_trace_diag_sse41_128_8.c' || echo './'`src/nw_trace_diag_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_diag_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_diag_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_diag_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_diag_sse41_128_8.lo `test -f 'src/sg_trace_diag_sse41_128_8.c' || echo './'`src/sg_trace_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time 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--mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_64.lo `test -f 'src/sg_trace_striped_sse41_128_64.c' || echo './'`src/sg_trace_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_diag_sse41_128_8.lo `test -f 'src/sg_trace_diag_sse41_128_8.c' || echo './'`src/sg_trace_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_diag_sse41_128_8.lo `test -f 'src/sw_trace_diag_sse41_128_8.c' || echo './'`src/sw_trace_diag_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_diag_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_64.lo `test -f 'src/nw_trace_striped_sse41_128_64.c' || echo './'`src/nw_trace_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_64.lo `test -f 'src/sg_trace_striped_sse41_128_64.c' || echo './'`src/sg_trace_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_32.lo `test -f 'src/sg_trace_striped_sse41_128_32.c' || echo './'`src/sg_trace_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_32.lo `test -f 'src/sw_trace_striped_sse41_128_32.c' || echo './'`src/sw_trace_striped_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_diag_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_16.lo `test -f 'src/nw_trace_striped_sse41_128_16.c' || echo './'`src/nw_trace_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_16.lo `test -f 'src/sg_trace_striped_sse41_128_16.c' || echo './'`src/sg_trace_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_16.lo `test -f 'src/sw_trace_striped_sse41_128_16.c' || echo './'`src/sw_trace_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_64.lo `test -f 'src/sw_trace_striped_sse41_128_64.c' || echo './'`src/sw_trace_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_8.lo `test -f 'src/nw_trace_striped_sse41_128_8.c' || echo './'`src/nw_trace_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_diag_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_32.lo `test -f 'src/nw_trace_striped_sse41_128_32.c' || echo './'`src/nw_trace_striped_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_32.lo `test -f 'src/sg_trace_striped_sse41_128_32.c' || echo './'`src/sg_trace_striped_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_32.lo `test -f 'src/sw_trace_striped_sse41_128_32.c' || echo './'`src/sw_trace_striped_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_striped_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_8.lo `test -f 'src/sg_trace_striped_sse41_128_8.c' || echo './'`src/sg_trace_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_8.lo `test -f 'src/sw_trace_striped_sse41_128_8.c' || echo './'`src/sw_trace_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_16.lo `test -f 'src/nw_trace_striped_sse41_128_16.c' || echo './'`src/nw_trace_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_16.lo `test -f 'src/sg_trace_striped_sse41_128_16.c' || echo './'`src/sg_trace_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_16.lo `test -f 'src/sw_trace_striped_sse41_128_16.c' || echo './'`src/sw_trace_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-nw_trace_striped_sse41_128_8.lo `test -f 'src/nw_trace_striped_sse41_128_8.c' || echo './'`src/nw_trace_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sg_trace_striped_sse41_128_8.lo `test -f 'src/sg_trace_striped_sse41_128_8.c' || echo './'`src/sg_trace_striped_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_striped_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_la-sw_trace_striped_sse41_128_8.lo `test -f 'src/sw_trace_striped_sse41_128_8.c' || echo './'`src/sw_trace_striped_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-nw_trace_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sg_trace_striped_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_la-sw_trace_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_32.lo `test -f 'src/sg_scan_sse41_128_32.c' || echo './'`src/sg_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_32.lo `test -f 'src/sw_scan_sse41_128_32.c' || echo './'`src/sw_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_32.lo `test -f 'src/sg_scan_sse41_128_32.c' || echo './'`src/sg_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_32.lo `test -f 'src/sw_scan_sse41_128_32.c' || echo './'`src/sw_scan_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_scan_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_16.lo `test -f 'src/nw_scan_sse41_128_16.c' || echo './'`src/nw_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_16.lo `test -f 'src/sg_scan_sse41_128_16.c' || echo './'`src/sg_scan_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_16.lo `test -f 'src/nw_scan_sse41_128_16.c' || echo './'`src/nw_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_16.lo `test -f 'src/sg_scan_sse41_128_16.c' || echo './'`src/sg_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_16.lo `test -f 'src/sw_scan_sse41_128_16.c' || echo './'`src/sw_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_16.lo `test -f 'src/sw_scan_sse41_128_16.c' || echo './'`src/sw_scan_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_8.lo `test -f 'src/nw_scan_sse41_128_8.c' || echo './'`src/nw_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_scan_sse41_128_8.lo `test -f 'src/sg_scan_sse41_128_8.c' || echo './'`src/sg_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_scan_sse41_128_8.lo `test -f 'src/nw_scan_sse41_128_8.c' || echo './'`src/nw_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration 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-I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_scan_sse41_128_8.lo `test -f 'src/sw_scan_sse41_128_8.c' || echo './'`src/sw_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_scan_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_64.lo `test -f 'src/nw_diag_sse41_128_64.c' || echo './'`src/nw_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_scan_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_64.lo `test -f 'src/sg_diag_sse41_128_64.c' || echo './'`src/sg_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_64.lo `test -f 'src/sw_diag_sse41_128_64.c' || echo './'`src/sw_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_32.lo `test -f 'src/nw_diag_sse41_128_32.c' || echo './'`src/nw_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_32.lo `test -f 'src/sg_diag_sse41_128_32.c' || echo './'`src/sg_diag_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_64.lo `test -f 'src/nw_diag_sse41_128_64.c' || echo './'`src/nw_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_64.lo `test -f 'src/sg_diag_sse41_128_64.c' || echo './'`src/sg_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_64.lo `test -f 'src/sw_diag_sse41_128_64.c' || echo './'`src/sw_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_32.lo `test 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src/libparasail_sse41_table_la-sg_diag_sse41_128_32.lo `test -f 'src/sg_diag_sse41_128_32.c' || echo './'`src/sg_diag_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_diag_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_32.lo `test -f 'src/sw_diag_sse41_128_32.c' || echo './'`src/sw_diag_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_16.lo `test -f 'src/nw_diag_sse41_128_16.c' || echo './'`src/nw_diag_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_16.lo `test -f 'src/sg_diag_sse41_128_16.c' || echo './'`src/sg_diag_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_16.lo `test -f 'src/sw_diag_sse41_128_16.c' || echo './'`src/sw_diag_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_32.lo `test -f 'src/sw_diag_sse41_128_32.c' || echo './'`src/sw_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_16.lo `test -f 'src/nw_diag_sse41_128_16.c' || echo './'`src/nw_diag_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_16.lo `test -f 'src/sg_diag_sse41_128_16.c' || echo './'`src/sg_diag_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_16.lo `test -f 'src/sw_diag_sse41_128_16.c' || echo './'`src/sw_diag_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_8.lo `test -f 'src/nw_diag_sse41_128_8.c' || echo './'`src/nw_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_8.lo `test -f 'src/sg_diag_sse41_128_8.c' || echo './'`src/sg_diag_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_diag_sse41_128_8.lo `test -f 'src/nw_diag_sse41_128_8.c' || echo './'`src/nw_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_diag_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_8.lo `test -f 'src/sw_diag_sse41_128_8.c' || echo './'`src/sw_diag_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_64.lo `test -f 'src/nw_striped_sse41_128_64.c' || echo './'`src/nw_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_diag_sse41_128_8.lo `test -f 'src/sg_diag_sse41_128_8.c' || echo './'`src/sg_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_diag_sse41_128_8.lo `test -f 'src/sw_diag_sse41_128_8.c' || echo './'`src/sw_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_64.lo `test -f 'src/nw_striped_sse41_128_64.c' || echo './'`src/nw_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_64.lo `test -f 'src/sg_striped_sse41_128_64.c' || echo './'`src/sg_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_64.lo `test -f 'src/sw_striped_sse41_128_64.c' || echo './'`src/sw_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_32.lo `test -f 'src/nw_striped_sse41_128_32.c' || echo './'`src/nw_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_32.lo `test -f 'src/sg_striped_sse41_128_32.c' || echo './'`src/sg_striped_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_64.lo `test -f 'src/sg_striped_sse41_128_64.c' || echo './'`src/sg_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_64.lo `test -f 'src/sw_striped_sse41_128_64.c' || echo './'`src/sw_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_32.lo `test -f 'src/sw_striped_sse41_128_32.c' || echo './'`src/sw_striped_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_32.lo `test -f 'src/nw_striped_sse41_128_32.c' || echo './'`src/nw_striped_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_32.lo `test -f 'src/sg_striped_sse41_128_32.c' || echo './'`src/sg_striped_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_16.lo `test -f 'src/nw_striped_sse41_128_16.c' || echo './'`src/nw_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_16.lo `test -f 'src/sg_striped_sse41_128_16.c' || echo './'`src/sg_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_32.lo `test -f 'src/sw_striped_sse41_128_32.c' || echo './'`src/sw_striped_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_striped_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_16.lo `test -f 'src/sw_striped_sse41_128_16.c' || echo './'`src/sw_striped_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_16.lo `test -f 'src/nw_striped_sse41_128_16.c' || echo './'`src/nw_striped_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_8.lo `test -f 'src/nw_striped_sse41_128_8.c' || echo './'`src/nw_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_8.lo `test -f 'src/sg_striped_sse41_128_8.c' || echo './'`src/sg_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_8.lo `test -f 'src/sw_striped_sse41_128_8.c' || echo './'`src/sw_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_blocked_sse41_128_32.lo `test -f 'src/sw_blocked_sse41_128_32.c' || echo './'`src/sw_blocked_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_blocked_sse41_128_16.lo `test -f 'src/sw_blocked_sse41_128_16.c' || echo './'`src/sw_blocked_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_64.lo `test -f 'src/nw_stats_scan_sse41_128_64.c' || echo './'`src/nw_stats_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_64.lo `test -f 'src/sg_stats_scan_sse41_128_64.c' || echo './'`src/sg_stats_scan_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_16.lo `test -f 'src/sg_striped_sse41_128_16.c' || echo './'`src/sg_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_16.lo `test -f 'src/sw_striped_sse41_128_16.c' || echo './'`src/sw_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_striped_sse41_128_8.lo `test -f 'src/nw_striped_sse41_128_8.c' || echo './'`src/nw_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_striped_sse41_128_8.lo `test -f 'src/sg_striped_sse41_128_8.c' || echo './'`src/sg_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_striped_sse41_128_8.lo `test -f 'src/sw_striped_sse41_128_8.c' || echo './'`src/sw_striped_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_64.lo `test -f 'src/sw_stats_scan_sse41_128_64.c' || echo './'`src/sw_stats_scan_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_blocked_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_blocked_sse41_128_32.lo `test -f 'src/sw_blocked_sse41_128_32.c' || echo './'`src/sw_blocked_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_blocked_sse41_128_16.lo `test -f 'src/sw_blocked_sse41_128_16.c' || echo './'`src/sw_blocked_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_64.lo `test -f 'src/nw_stats_scan_sse41_128_64.c' || echo './'`src/nw_stats_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_64.lo `test -f 'src/sg_stats_scan_sse41_128_64.c' || echo './'`src/sg_stats_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_striped_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_blocked_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_64.lo `test -f 'src/sw_stats_scan_sse41_128_64.c' || echo './'`src/sw_stats_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_blocked_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_32.lo `test -f 'src/nw_stats_scan_sse41_128_32.c' || echo './'`src/nw_stats_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_32.lo `test -f 'src/sg_stats_scan_sse41_128_32.c' || echo './'`src/sg_stats_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_32.lo `test -f 'src/nw_stats_scan_sse41_128_32.c' || echo './'`src/nw_stats_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_scan_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_32.lo `test -f 'src/sw_stats_scan_sse41_128_32.c' || echo './'`src/sw_stats_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_16.lo `test -f 'src/nw_stats_scan_sse41_128_16.c' || echo './'`src/nw_stats_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_16.lo `test -f 'src/sg_stats_scan_sse41_128_16.c' || echo './'`src/sg_stats_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_32.lo `test -f 'src/sg_stats_scan_sse41_128_32.c' || echo './'`src/sg_stats_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_32.lo `test -f 'src/sw_stats_scan_sse41_128_32.c' || echo './'`src/sw_stats_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_16.lo `test -f 'src/nw_stats_scan_sse41_128_16.c' || echo './'`src/nw_stats_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_16.lo `test -f 'src/sg_stats_scan_sse41_128_16.c' || echo './'`src/sg_stats_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_16.lo `test -f 'src/sw_stats_scan_sse41_128_16.c' || echo './'`src/sw_stats_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_8.lo `test -f 'src/nw_stats_scan_sse41_128_8.c' || echo './'`src/nw_stats_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_8.lo `test -f 'src/sg_stats_scan_sse41_128_8.c' || echo './'`src/sg_stats_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_16.lo `test -f 'src/sw_stats_scan_sse41_128_16.c' || echo './'`src/sw_stats_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_scan_sse41_128_8.lo `test -f 'src/nw_stats_scan_sse41_128_8.c' || echo './'`src/nw_stats_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_scan_sse41_128_8.lo `test -f 'src/sg_stats_scan_sse41_128_8.c' || echo './'`src/sg_stats_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_8.lo `test -f 'src/sw_stats_scan_sse41_128_8.c' || echo './'`src/sw_stats_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_64.lo `test -f 'src/nw_stats_diag_sse41_128_64.c' || echo './'`src/nw_stats_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_scan_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_scan_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_32.lo `test -f 'src/sg_stats_diag_sse41_128_32.c' || echo './'`src/sg_stats_diag_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_scan_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_32.lo `test -f 'src/sw_stats_diag_sse41_128_32.c' || echo './'`src/sw_stats_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_scan_sse41_128_8.lo `test -f 'src/sw_stats_scan_sse41_128_8.c' || echo './'`src/sw_stats_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_64.lo `test -f 'src/nw_stats_diag_sse41_128_64.c' || echo './'`src/nw_stats_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c In file included from src/nw_stats_scan_sse41_128_64.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:452:19: @@ -3482,17 +3508,10 @@ src/nw_stats_scan_sse41_128_64.c:379:17: note: 'vHtL' was declared here 379 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo './'`src/sg_stats_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_16.lo `test -f 'src/sw_stats_diag_sse41_128_16.c' || echo './'`src/sw_stats_diag_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_16.o -In file included from src/sg_stats_scan_sse41_128_64.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c +In file included from src/nw_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:485:19: + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:384:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3500,12 +3519,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:410:17: note: 'vHtM' was declared here - 410 | __m128i vHtM; +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:309:17: note: 'vHtM' was declared here + 309 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:486:19: + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:385:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3513,31 +3532,29 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:411:17: note: 'vHtS' was declared here - 411 | __m128i vHtS; +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:310:17: note: 'vHtS' was declared here + 310 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_64.c:16: -In function '_mm_add_epi64', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:487:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); +In file included from src/nw_stats_scan_sse41_128_32.c:16: +In function '_mm_add_epi32', + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:386:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:412:17: note: 'vHtL' was declared here - 412 | __m128i vHtL; +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:311:17: note: 'vHtL' was declared here + 311 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c -In file included from src/sg_stats_scan_sse41_128_32.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_32.lo `test -f 'src/sg_stats_diag_sse41_128_32.c' || echo './'`src/sg_stats_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_32.lo `test -f 'src/sw_stats_diag_sse41_128_32.c' || echo './'`src/sw_stats_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_64.o +In file included from src/sw_stats_scan_sse41_128_32.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3545,12 +3562,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here - 331 | __m128i vHtM; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here + 302 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3558,21 +3575,62 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here - 332 | __m128i vHtS; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here + 303 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_32.c:16: +In file included from src/sw_stats_scan_sse41_128_32.c:17: In function '_mm_add_epi32', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here - 333 | __m128i vHtL; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here + 304 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c +In file included from src/sg_stats_scan_sse41_128_64.c:17: +In function '_mm_blendv_epi8', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:485:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:410:17: note: 'vHtM' was declared here + 410 | __m128i vHtM; + | ^~~~ +In function '_mm_blendv_epi8', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:486:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:411:17: note: 'vHtS' was declared here + 411 | __m128i vHtS; + | ^~~~ +In file included from src/sg_stats_scan_sse41_128_64.c:16: +In function '_mm_add_epi64', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:487:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:412:17: note: 'vHtL' was declared here + 412 | __m128i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo './'`src/sg_stats_diag_sse41_128_16.c In file included from src/nw_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:392:19: @@ -3610,9 +3668,11 @@ src/nw_stats_scan_sse41_128_16.c:319:17: note: 'vHtL' was declared here 319 | __m128i vHtL; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_32.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_16.lo `test -f 'src/sw_stats_diag_sse41_128_16.c' || echo './'`src/sw_stats_diag_sse41_128_16.c +In file included from src/sg_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:384:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3620,12 +3680,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:309:17: note: 'vHtM' was declared here - 309 | __m128i vHtM; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here + 339 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:385:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3633,27 +3693,25 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:310:17: note: 'vHtS' was declared here - 310 | __m128i vHtS; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here + 340 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_32.c:16: -In function '_mm_add_epi32', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:386:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:311:17: note: 'vHtL' was declared here - 311 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_16.c:16: +In function '_mm_adds_epi16', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here + 341 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_16.lo `test -f 'src/nw_stats_striped_sse41_128_16.c' || echo './'`src/nw_stats_striped_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_64.o -In file included from src/sw_stats_scan_sse41_128_64.c:18: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_16.o +In file included from src/sw_stats_scan_sse41_128_16.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:444:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3661,12 +3719,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': -src/sw_stats_scan_sse41_128_64.c:369:17: note: 'vHtM' was declared here - 369 | __m128i vHtM; +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here + 311 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:445:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3674,30 +3732,23 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': -src/sw_stats_scan_sse41_128_64.c:370:17: note: 'vHtS' was declared here - 370 | __m128i vHtS; +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here + 312 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_64.c:17: -In function '_mm_add_epi64', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:446:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_32.o -src/sw_stats_scan_sse41_128_64.c:371:17: note: 'vHtL' was declared here - 371 | __m128i vHtL; +In file included from src/sw_stats_scan_sse41_128_16.c:17: +In function '_mm_adds_epi16', + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here + 313 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_16.lo `test -f 'src/sg_stats_striped_sse41_128_16.c' || echo './'`src/sg_stats_striped_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_16.o -In file included from src/sw_stats_scan_sse41_128_32.c:18: +In file included from src/nw_stats_scan_sse41_128_8.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_32.o + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:408:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3705,12 +3756,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here - 302 | __m128i vHtM; +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:333:17: note: 'vHtM' was declared here + 333 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:409:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3718,23 +3769,24 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here - 303 | __m128i vHtS; +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:334:17: note: 'vHtS' was declared here + 334 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_32.c:17: -In function '_mm_add_epi32', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here - 304 | __m128i vHtL; +In file included from src/nw_stats_scan_sse41_128_8.c:16: +In function '_mm_adds_epi8', + inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:410:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': +src/nw_stats_scan_sse41_128_8.c:335:17: note: 'vHtL' was declared here + 335 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_16.c:18: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_16.o +In file included from src/sg_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3742,12 +3794,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here - 311 | __m128i vHtM; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here + 331 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3755,20 +3807,21 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here - 312 | __m128i vHtS; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here + 332 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_16.c:17: -In function '_mm_adds_epi16', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here - 313 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_32.c:16: +In function '_mm_add_epi32', + inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here + 333 | __m128i vHtL; | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c In file included from src/sg_stats_scan_sse41_128_8.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:430:19: @@ -3806,51 +3859,9 @@ src/sg_stats_scan_sse41_128_8.c:357:17: note: 'vHtL' was declared here 357 | __m128i vHtL; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_8.c:18: -In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:403:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:328:17: note: 'vHtM' was declared here - 328 | __m128i vHtM; - | ^~~~ -In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:404:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:329:17: note: 'vHtS' was declared here - 329 | __m128i vHtS; - | ^~~~ -In file included from src/sw_stats_scan_sse41_128_8.c:17: -In function '_mm_adds_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:405:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:330:17: note: 'vHtL' was declared here - 330 | __m128i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c -In file included from src/sg_stats_scan_sse41_128_16.c:17: +In file included from src/sw_stats_scan_sse41_128_64.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:444:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3858,12 +3869,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here - 339 | __m128i vHtM; +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:369:17: note: 'vHtM' was declared here + 369 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:445:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3871,24 +3882,43 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here - 340 | __m128i vHtS; +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:370:17: note: 'vHtS' was declared here + 370 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_16.c:16: -In function '_mm_adds_epi16', - inlined from 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here - 341 | __m128i vHtL; +In file included from src/sw_stats_scan_sse41_128_64.c:17: +In function '_mm_add_epi64', + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:446:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_sse41_128_64.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_64': +src/sw_stats_scan_sse41_128_64.c:371:17: note: 'vHtL' was declared here + 371 | __m128i vHtL; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_8.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_diag_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_16.lo `test -f 'src/nw_stats_striped_sse41_128_16.c' || echo './'`src/nw_stats_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_16.lo `test -f 'src/sg_stats_striped_sse41_128_16.c' || echo './'`src/sg_stats_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_16.o +In file included from src/sw_stats_scan_sse41_128_8.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:408:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:403:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3896,12 +3926,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:333:17: note: 'vHtM' was declared here - 333 | __m128i vHtM; +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:328:17: note: 'vHtM' was declared here + 328 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:409:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:404:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3909,148 +3939,131 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:334:17: note: 'vHtS' was declared here - 334 | __m128i vHtS; +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:329:17: note: 'vHtS' was declared here + 329 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_8.c:16: +In file included from src/sw_stats_scan_sse41_128_8.c:17: In function '_mm_adds_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:410:19: + inlined from 'parasail_sw_stats_table_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:405:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_8.c: In function 'parasail_nw_stats_table_scan_profile_sse41_128_8': -src/nw_stats_scan_sse41_128_8.c:335:17: note: 'vHtL' was declared here - 335 | __m128i vHtL; +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_table_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:330:17: note: 'vHtL' was declared here + 330 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_scan_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_64.lo `test -f 'src/nw_scan_sse41_128_64.c' || echo './'`src/nw_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-nw_stats_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sg_stats_striped_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_table_la-sw_stats_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_32.lo `test -f 'src/sg_scan_sse41_128_32.c' || echo './'`src/sg_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_32.lo `test -f 'src/sw_scan_sse41_128_32.c' || echo './'`src/sw_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_16.lo `test -f 'src/nw_scan_sse41_128_16.c' || echo './'`src/nw_scan_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_64.lo `test -f 'src/sg_scan_sse41_128_64.c' || echo './'`src/sg_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_64.lo `test -f 'src/sw_scan_sse41_128_64.c' || echo './'`src/sw_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_32.lo `test -f 'src/nw_scan_sse41_128_32.c' || echo './'`src/nw_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_32.lo `test -f 'src/sg_scan_sse41_128_32.c' || echo './'`src/sg_scan_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_32.lo `test -f 'src/sw_scan_sse41_128_32.c' || echo './'`src/sw_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_16.lo `test -f 'src/nw_scan_sse41_128_16.c' || echo './'`src/nw_scan_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_16.lo `test -f 'src/sg_scan_sse41_128_16.c' || echo './'`src/sg_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_16.lo `test -f 'src/sw_scan_sse41_128_16.c' || echo './'`src/sw_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_8.lo `test -f 'src/nw_scan_sse41_128_8.c' || echo './'`src/nw_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_16.lo `test -f 'src/sg_scan_sse41_128_16.c' || echo './'`src/sg_scan_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_8.lo `test -f 'src/sg_scan_sse41_128_8.c' || echo './'`src/sg_scan_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_8.lo `test -f 'src/sw_scan_sse41_128_8.c' || echo './'`src/sw_scan_sse41_128_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_scan_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_16.lo `test -f 'src/sw_scan_sse41_128_16.c' || echo './'`src/sw_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_8.lo `test -f 'src/nw_scan_sse41_128_8.c' || echo './'`src/nw_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_8.lo `test -f 'src/sg_scan_sse41_128_8.c' || echo './'`src/sg_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_8.lo `test -f 'src/sw_scan_sse41_128_8.c' || echo './'`src/sw_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_64.lo `test -f 'src/nw_diag_sse41_128_64.c' || echo './'`src/nw_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_scan_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_64.lo `test -f 'src/nw_diag_sse41_128_64.c' || echo './'`src/nw_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_64.lo `test -f 'src/sg_diag_sse41_128_64.c' || echo './'`src/sg_diag_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_64.lo `test -f 'src/sw_diag_sse41_128_64.c' || echo './'`src/sw_diag_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_32.lo `test -f 'src/nw_diag_sse41_128_32.c' || echo './'`src/nw_diag_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_64.lo `test -f 'src/sg_diag_sse41_128_64.c' || echo './'`src/sg_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_64.lo `test -f 'src/sw_diag_sse41_128_64.c' || echo './'`src/sw_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_scan_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_diag_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_32.lo `test -f 'src/nw_diag_sse41_128_32.c' || echo './'`src/nw_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_32.lo `test -f 'src/sg_diag_sse41_128_32.c' || echo './'`src/sg_diag_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_scan_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_32.lo `test -f 'src/sw_diag_sse41_128_32.c' || echo './'`src/sw_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_diag_sse41_128_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_32.lo `test -f 'src/sg_diag_sse41_128_32.c' || echo './'`src/sg_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_32.lo `test -f 'src/sw_diag_sse41_128_32.c' || echo './'`src/sw_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_16.lo `test -f 'src/nw_diag_sse41_128_16.c' || echo './'`src/nw_diag_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_16.lo `test -f 'src/nw_diag_sse41_128_16.c' || echo './'`src/nw_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_16.lo `test -f 'src/sg_diag_sse41_128_16.c' || echo './'`src/sg_diag_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_16.lo `test -f 'src/sg_diag_sse41_128_16.c' || echo './'`src/sg_diag_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_16.lo `test -f 'src/sw_diag_sse41_128_16.c' || echo './'`src/sw_diag_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_diag_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_8.lo `test -f 'src/nw_diag_sse41_128_8.c' || echo './'`src/nw_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_8.lo `test -f 'src/sg_diag_sse41_128_8.c' || echo './'`src/sg_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_8.lo `test -f 'src/sw_diag_sse41_128_8.c' || echo './'`src/sw_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_striped_sse41_128_64.lo `test -f 'src/nw_striped_sse41_128_64.c' || echo './'`src/nw_striped_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_16.lo `test -f 'src/sw_diag_sse41_128_16.c' || echo './'`src/sw_diag_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_diag_sse41_128_8.lo `test -f 'src/nw_diag_sse41_128_8.c' || echo './'`src/nw_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_diag_sse41_128_8.lo `test -f 'src/sg_diag_sse41_128_8.c' || echo './'`src/sg_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_diag_sse41_128_8.lo `test -f 'src/sw_diag_sse41_128_8.c' || echo './'`src/sw_diag_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_striped_sse41_128_64.lo `test -f 'src/nw_striped_sse41_128_64.c' || echo './'`src/nw_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_striped_sse41_128_64.lo `test -f 'src/sg_striped_sse41_128_64.c' || echo './'`src/sg_striped_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_striped_sse41_128_64.lo `test -f 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_striped_sse41_128_16.lo `test -f 'src/sw_striped_sse41_128_16.c' || echo 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-fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_striped_sse41_128_64.lo `test -f 'src/sg_striped_sse41_128_64.c' || echo './'`src/sg_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_striped_sse41_128_64.lo `test -f 'src/sw_striped_sse41_128_64.c' || echo './'`src/sw_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_diag_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_diag_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_diag_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_striped_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_striped_sse41_128_8.lo `test -f 'src/sg_striped_sse41_128_8.c' || echo './'`src/sg_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_64.lo `test -f 'src/nw_stats_scan_sse41_128_64.c' || echo './'`src/nw_stats_scan_sse41_128_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 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--mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_32.lo `test -f 'src/nw_stats_scan_sse41_128_32.c' || echo './'`src/nw_stats_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_32.lo `test -f 'src/sw_stats_scan_sse41_128_32.c' || echo './'`src/sw_stats_scan_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_16.lo `test -f 'src/nw_stats_scan_sse41_128_16.c' || echo './'`src/nw_stats_scan_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time 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-/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_8.lo `test -f 'src/nw_stats_scan_sse41_128_8.c' || echo './'`src/nw_stats_scan_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic 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'./'`src/nw_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_striped_sse41_128_16.lo `test -f 'src/sg_striped_sse41_128_16.c' || echo './'`src/sg_striped_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_striped_sse41_128_16.lo `test -f 'src/sw_striped_sse41_128_16.c' || echo './'`src/sw_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_striped_sse41_128_8.lo `test -f 'src/nw_striped_sse41_128_8.c' || echo './'`src/nw_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_striped_sse41_128_8.lo `test -f 'src/sg_striped_sse41_128_8.c' || echo './'`src/sg_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_striped_sse41_128_8.lo `test -f 'src/sw_striped_sse41_128_8.c' || echo './'`src/sw_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_32.lo `test -f 'src/sw_blocked_sse41_128_32.c' || echo './'`src/sw_blocked_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_16.lo `test -f 'src/sw_blocked_sse41_128_16.c' || echo './'`src/sw_blocked_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_striped_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_striped_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_64.lo `test -f 'src/nw_stats_diag_sse41_128_64.c' || echo './'`src/nw_stats_diag_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_64.lo `test -f 'src/nw_stats_scan_sse41_128_64.c' || echo './'`src/nw_stats_scan_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_striped_sse41_128_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_64.lo `test -f 'src/sg_stats_scan_sse41_128_64.c' || echo './'`src/sg_stats_scan_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_blocked_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_blocked_sse41_128_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_64.lo `test -f 'src/sw_stats_scan_sse41_128_64.c' || echo './'`src/sw_stats_scan_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_32.lo `test -f 'src/nw_stats_scan_sse41_128_32.c' || echo './'`src/nw_stats_scan_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_32.lo `test -f 'src/sg_stats_scan_sse41_128_32.c' || echo './'`src/sg_stats_scan_sse41_128_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_32.lo `test -f 'src/sw_stats_scan_sse41_128_32.c' || echo './'`src/sw_stats_scan_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_16.lo `test -f 'src/nw_stats_scan_sse41_128_16.c' || echo './'`src/nw_stats_scan_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_16.lo `test -f 'src/sg_stats_scan_sse41_128_16.c' || echo './'`src/sg_stats_scan_sse41_128_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_16.lo `test -f 'src/sw_stats_scan_sse41_128_16.c' || echo './'`src/sw_stats_scan_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_8.lo `test -f 'src/nw_stats_scan_sse41_128_8.c' || echo './'`src/nw_stats_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_8.lo `test -f 'src/sg_stats_scan_sse41_128_8.c' || echo './'`src/sg_stats_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_8.lo `test -f 'src/sw_stats_scan_sse41_128_8.c' || echo './'`src/sw_stats_scan_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_64.lo `test -f 'src/nw_stats_diag_sse41_128_64.c' || echo './'`src/nw_stats_diag_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_64.lo `test -f 'src/sg_stats_diag_sse41_128_64.c' || echo './'`src/sg_stats_diag_sse41_128_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_32.lo `test -f 'src/sg_stats_diag_sse41_128_32.c' || echo './'`src/sg_stats_diag_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_32.lo `test -f 'src/sw_stats_diag_sse41_128_32.c' || echo './'`src/sw_stats_diag_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo './'`src/sg_stats_diag_sse41_128_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_16.lo `test -f 'src/sw_stats_diag_sse41_128_16.c' || echo './'`src/sw_stats_diag_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_8.o -In file included from src/sg_stats_scan_sse41_128_32.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_64.lo `test -f 'src/sw_stats_diag_sse41_128_64.c' || echo './'`src/sw_stats_diag_sse41_128_64.c +In file included from src/sw_stats_scan_sse41_128_32.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4058,12 +4071,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here - 331 | __m128i vHtM; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here + 302 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4071,21 +4084,22 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here - 332 | __m128i vHtS; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here + 303 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_32.c:16: +In file included from src/sw_stats_scan_sse41_128_32.c:17: In function '_mm_add_epi32', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': -src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here - 333 | __m128i vHtL; +src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': +src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here + 304 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_32.lo `test -f 'src/nw_stats_diag_sse41_128_32.c' || echo './'`src/nw_stats_diag_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_32.lo `test -f 'src/sg_stats_diag_sse41_128_32.c' || echo './'`src/sg_stats_diag_sse41_128_32.c In file included from src/sw_stats_scan_sse41_128_64.c:18: In function '_mm_blendv_epi8', inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_64' at src/sw_stats_scan_sse41_128_64.c:444:19: @@ -4123,9 +4137,9 @@ src/sw_stats_scan_sse41_128_64.c:371:17: note: 'vHtL' was declared here 371 | __m128i vHtL; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_8.c:17: +In file included from src/sg_stats_scan_sse41_128_64.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:430:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:485:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4133,12 +4147,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:355:17: note: 'vHtM' was declared here - 355 | __m128i vHtM; +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:410:17: note: 'vHtM' was declared here + 410 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:431:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:486:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4146,24 +4160,33 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:356:17: note: 'vHtS' was declared here - 356 | __m128i vHtS; +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:411:17: note: 'vHtS' was declared here + 411 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_8.c:16: -In function '_mm_adds_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:432:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': -src/sg_stats_scan_sse41_128_8.c:357:17: note: 'vHtL' was declared here - 357 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_64.c:16: +In function '_mm_add_epi64', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:487:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': +src/sg_stats_scan_sse41_128_64.c:412:17: note: 'vHtL' was declared here + 412 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c -In file included from src/sg_stats_scan_sse41_128_16.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_scan_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_scan_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_32.lo `test -f 'src/sw_stats_diag_sse41_128_32.c' || echo './'`src/sw_stats_diag_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_scan_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_16.lo `test -f 'src/nw_stats_diag_sse41_128_16.c' || echo './'`src/nw_stats_diag_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_32.o +In file included from src/nw_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:392:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4171,12 +4194,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here - 339 | __m128i vHtM; +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:317:17: note: 'vHtM' was declared here + 317 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:393:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4184,70 +4207,25 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here - 340 | __m128i vHtS; +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:318:17: note: 'vHtS' was declared here + 318 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_16.c:16: +In file included from src/nw_stats_scan_sse41_128_16.c:16: In function '_mm_adds_epi16', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:394:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': -src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here - 341 | __m128i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c -In file included from src/sw_stats_scan_sse41_128_8.c:18: -In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:403:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_64.o -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:328:17: note: 'vHtM' was declared here - 328 | __m128i vHtM; - | ^~~~ -In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:404:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 182 | (__v16qi)__Y, - | ~~~~~~~~~~~~~ - 183 | (__v16qi)__M); - | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:329:17: note: 'vHtS' was declared here - 329 | __m128i vHtS; - | ^~~~ -In file included from src/sw_stats_scan_sse41_128_8.c:17: -In function '_mm_adds_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:405:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': -src/sw_stats_scan_sse41_128_8.c:330:17: note: 'vHtL' was declared here - 330 | __m128i vHtL; +src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': +src/nw_stats_scan_sse41_128_16.c:319:17: note: 'vHtL' was declared here + 319 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_16.lo `test -f 'src/nw_stats_striped_sse41_128_16.c' || echo './'`src/nw_stats_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_16.lo `test -f 'src/sg_stats_striped_sse41_128_16.c' || echo './'`src/sg_stats_striped_sse41_128_16.c -In file included from src/nw_stats_scan_sse41_128_16.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_16.o +In file included from src/nw_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:392:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:384:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4255,12 +4233,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:317:17: note: 'vHtM' was declared here - 317 | __m128i vHtM; +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:309:17: note: 'vHtM' was declared here + 309 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:393:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:385:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4268,27 +4246,23 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:318:17: note: 'vHtS' was declared here - 318 | __m128i vHtS; +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:310:17: note: 'vHtS' was declared here + 310 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_16.c:16: -In function '_mm_adds_epi16', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16' at src/nw_stats_scan_sse41_128_16.c:394:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_16.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_16': -src/nw_stats_scan_sse41_128_16.c:319:17: note: 'vHtL' was declared here - 319 | __m128i vHtL; +In file included from src/nw_stats_scan_sse41_128_32.c:16: +In function '_mm_add_epi32', + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:386:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': +src/nw_stats_scan_sse41_128_32.c:311:17: note: 'vHtL' was declared here + 311 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c -In file included from src/sw_stats_scan_sse41_128_16.c:18: +In file included from src/sg_stats_scan_sse41_128_16.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:414:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4296,12 +4270,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here - 311 | __m128i vHtM; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:339:17: note: 'vHtM' was declared here + 339 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:415:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4309,25 +4283,24 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here - 312 | __m128i vHtS; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:340:17: note: 'vHtS' was declared here + 340 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_16.c:17: +In file included from src/sg_stats_scan_sse41_128_16.c:16: In function '_mm_adds_epi16', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16' at src/sg_stats_scan_sse41_128_16.c:416:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': -src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here - 313 | __m128i vHtL; +src/sg_stats_scan_sse41_128_16.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_16': +src/sg_stats_scan_sse41_128_16.c:341:17: note: 'vHtL' was declared here + 341 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_32.o -In file included from src/sw_stats_scan_sse41_128_32.c:18: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_16.lo `test -f 'src/sg_stats_diag_sse41_128_16.c' || echo './'`src/sg_stats_diag_sse41_128_16.c +In file included from src/nw_stats_scan_sse41_128_64.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:377:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:452:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4335,12 +4308,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:302:17: note: 'vHtM' was declared here - 302 | __m128i vHtM; +src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': +src/nw_stats_scan_sse41_128_64.c:377:17: note: 'vHtM' was declared here + 377 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:378:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:453:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4348,22 +4321,20 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:303:17: note: 'vHtS' was declared here - 303 | __m128i vHtS; +src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': +src/nw_stats_scan_sse41_128_64.c:378:17: note: 'vHtS' was declared here + 378 | __m128i vHtS; | ^~~~ -In file included from src/sw_stats_scan_sse41_128_32.c:17: -In function '_mm_add_epi32', - inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32' at src/sw_stats_scan_sse41_128_32.c:379:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); +In file included from src/nw_stats_scan_sse41_128_64.c:16: +In function '_mm_add_epi64', + inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:454:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); | ^~~~~~~~~~~ -src/sw_stats_scan_sse41_128_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_32': -src/sw_stats_scan_sse41_128_32.c:304:17: note: 'vHtL' was declared here - 304 | __m128i vHtL; +src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': +src/nw_stats_scan_sse41_128_64.c:379:17: note: 'vHtL' was declared here + 379 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_32.o In file included from src/nw_stats_scan_sse41_128_8.c:17: In function '_mm_blendv_epi8', inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_8' at src/nw_stats_scan_sse41_128_8.c:408:19: @@ -4401,18 +4372,12 @@ src/nw_stats_scan_sse41_128_8.c:335:17: note: 'vHtL' was declared here 335 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_memory_la-memory_avx2.lo `test -f 'src/memory_avx2.c' || echo './'`src/memory_avx2.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_64.lo `test -f 'src/nw_scan_avx2_256_64.c' || echo './'`src/nw_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c -In file included from src/sg_stats_scan_sse41_128_64.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_16.lo `test -f 'src/sw_stats_diag_sse41_128_16.c' || echo './'`src/sw_stats_diag_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_8.lo `test -f 'src/nw_stats_diag_sse41_128_8.c' || echo './'`src/nw_stats_diag_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_16.o +In file included from src/sg_stats_scan_sse41_128_32.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:485:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:406:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4420,12 +4385,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:410:17: note: 'vHtM' was declared here - 410 | __m128i vHtM; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:331:17: note: 'vHtM' was declared here + 331 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:486:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:407:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4433,24 +4398,26 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:411:17: note: 'vHtS' was declared here - 411 | __m128i vHtS; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_8.lo `test -f 'src/sg_stats_diag_sse41_128_8.c' || echo './'`src/sg_stats_diag_sse41_128_8.c +src/sg_stats_scan_sse41_128_32.c:332:17: note: 'vHtS' was declared here + 332 | __m128i vHtS; | ^~~~ -In file included from src/sg_stats_scan_sse41_128_64.c:16: -In function '_mm_add_epi64', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64' at src/sg_stats_scan_sse41_128_64.c:487:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); +In file included from src/sg_stats_scan_sse41_128_32.c:16: +In function '_mm_add_epi32', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32' at src/sg_stats_scan_sse41_128_32.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); | ^~~~~~~~~~~ -src/sg_stats_scan_sse41_128_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_64': -src/sg_stats_scan_sse41_128_64.c:412:17: note: 'vHtL' was declared here - 412 | __m128i vHtL; +src/sg_stats_scan_sse41_128_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_32': +src/sg_stats_scan_sse41_128_32.c:333:17: note: 'vHtL' was declared here + 333 | __m128i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c -In file included from src/nw_stats_scan_sse41_128_32.c:17: +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_8.lo `test -f 'src/sw_stats_diag_sse41_128_8.c' || echo './'`src/sw_stats_diag_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_64.lo `test -f 'src/nw_stats_striped_sse41_128_64.c' || echo './'`src/nw_stats_striped_sse41_128_64.c +In file included from src/sg_stats_scan_sse41_128_8.c:17: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:384:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:430:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4458,12 +4425,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:309:17: note: 'vHtM' was declared here - 309 | __m128i vHtM; +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:355:17: note: 'vHtM' was declared here + 355 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:385:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:431:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4471,29 +4438,27 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:310:17: note: 'vHtS' was declared here - 310 | __m128i vHtS; +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:356:17: note: 'vHtS' was declared here + 356 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_32.c:16: -In function '_mm_add_epi32', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32' at src/nw_stats_scan_sse41_128_32.c:386:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1072:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1072 | return (__m128i) ((__v4su)__A + (__v4su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_sse41_128_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_32': -src/nw_stats_scan_sse41_128_32.c:311:17: note: 'vHtL' was declared here - 311 | __m128i vHtL; +In file included from src/sg_stats_scan_sse41_128_8.c:16: +In function '_mm_adds_epi8', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8' at src/sg_stats_scan_sse41_128_8.c:432:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_sse41_128_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_sse41_128_8': +src/sg_stats_scan_sse41_128_8.c:357:17: note: 'vHtL' was declared here + 357 | __m128i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/memory_avx2.c -fPIC -DPIC -o src/.libs/libparasail_avx2_memory_la-memory_avx2.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_64.o -In file included from src/nw_stats_scan_sse41_128_64.c:17: +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_diag_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_64.lo `test -f 'src/sg_stats_striped_sse41_128_64.c' || echo './'`src/sg_stats_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_diag_sse41_128_8.o +In file included from src/sw_stats_scan_sse41_128_8.c:18: In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:452:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:403:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4501,12 +4466,12 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': -src/nw_stats_scan_sse41_128_64.c:377:17: note: 'vHtM' was declared here - 377 | __m128i vHtM; +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:328:17: note: 'vHtM' was declared here + 328 | __m128i vHtM; | ^~~~ In function '_mm_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:453:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:404:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4514,137 +4479,254 @@ | ~~~~~~~~~~~~~ 183 | (__v16qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': -src/nw_stats_scan_sse41_128_64.c:378:17: note: 'vHtS' was declared here - 378 | __m128i vHtS; +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:329:17: note: 'vHtS' was declared here + 329 | __m128i vHtS; | ^~~~ -In file included from src/nw_stats_scan_sse41_128_64.c:16: -In function '_mm_add_epi64', - inlined from 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64' at src/nw_stats_scan_sse41_128_64.c:454:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1078:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 1078 | return (__m128i) ((__v2du)__A + (__v2du)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_sse41_128_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_sse41_128_64': -src/nw_stats_scan_sse41_128_64.c:379:17: note: 'vHtL' was declared here - 379 | __m128i vHtL; +In file included from src/sw_stats_scan_sse41_128_8.c:17: +In function '_mm_adds_epi8', + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8' at src/sw_stats_scan_sse41_128_8.c:405:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1084:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1084 | return (__m128i)__builtin_ia32_paddsb128 ((__v16qi)__A, (__v16qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse41_128_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_8': +src/sw_stats_scan_sse41_128_8.c:330:17: note: 'vHtL' was declared here + 330 | __m128i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_64.lo `test -f 'src/sw_stats_striped_sse41_128_64.c' || echo './'`src/sw_stats_striped_sse41_128_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_diag_sse41_128_8.o +In file included from src/sw_stats_scan_sse41_128_16.c:18: +In function '_mm_blendv_epi8', + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:386:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:311:17: note: 'vHtM' was declared here + 311 | __m128i vHtM; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_16.lo `test -f 'src/nw_scan_avx2_256_16.c' || echo './'`src/nw_scan_avx2_256_16.c +In function '_mm_blendv_epi8', + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:387:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/smmintrin.h:181:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 181 | return (__m128i) __builtin_ia32_pblendvb128 ((__v16qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 182 | (__v16qi)__Y, + | ~~~~~~~~~~~~~ + 183 | (__v16qi)__M); + | ~~~~~~~~~~~~~ +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:312:17: note: 'vHtS' was declared here + 312 | __m128i vHtS; + | ^~~~ +In file included from src/sw_stats_scan_sse41_128_16.c:17: +In function '_mm_adds_epi16', + inlined from 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16' at src/sw_stats_scan_sse41_128_16.c:388:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/emmintrin.h:1090:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 1090 | return (__m128i)__builtin_ia32_paddsw128 ((__v8hi)__A, (__v8hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_sse41_128_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_sse41_128_16': +src/sw_stats_scan_sse41_128_16.c:313:17: note: 'vHtL' was declared here + 313 | __m128i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_32.lo `test -f 'src/nw_stats_striped_sse41_128_32.c' || echo './'`src/nw_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_32.lo `test -f 'src/sg_stats_striped_sse41_128_32.c' || echo './'`src/sg_stats_striped_sse41_128_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_64.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_32.lo `test -f 'src/sw_stats_striped_sse41_128_32.c' || echo './'`src/sw_stats_striped_sse41_128_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_16.lo `test -f 'src/nw_stats_striped_sse41_128_16.c' || echo './'`src/nw_stats_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_16.lo `test -f 'src/sg_stats_striped_sse41_128_16.c' || echo './'`src/sg_stats_striped_sse41_128_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_16.lo `test -f 'src/sw_stats_striped_sse41_128_16.c' || echo './'`src/sw_stats_striped_sse41_128_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_8.lo `test -f 'src/nw_stats_striped_sse41_128_8.c' || echo './'`src/nw_stats_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_32.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_8.lo `test -f 'src/sg_stats_striped_sse41_128_8.c' || echo './'`src/sg_stats_striped_sse41_128_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_8.lo `test -f 'src/sw_stats_striped_sse41_128_8.c' || echo './'`src/sw_stats_striped_sse41_128_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_memory_la-memory_avx2.lo `test -f 'src/memory_avx2.c' || echo './'`src/memory_avx2.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_16.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-nw_stats_striped_sse41_128_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sw_stats_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_64.lo `test -f 'src/nw_scan_avx2_256_64.c' || echo './'`src/nw_scan_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/memory_avx2.c -fPIC -DPIC -o src/.libs/libparasail_avx2_memory_la-memory_avx2.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_sse41_128_8.c -fPIC -DPIC -o src/.libs/libparasail_sse41_rowcol_la-sg_stats_striped_sse41_128_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_16.lo `test -f 'src/sg_scan_avx2_256_16.c' || echo './'`src/sg_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_16.lo `test -f 'src/nw_scan_avx2_256_16.c' || echo './'`src/nw_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_16.lo `test -f 'src/sg_scan_avx2_256_16.c' || echo './'`src/sg_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_diag_avx2_256_64.lo `test -f 'src/nw_diag_avx2_256_64.c' || echo './'`src/nw_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_diag_avx2_256_64.lo `test -f 'src/sg_diag_avx2_256_64.c' || echo './'`src/sg_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_diag_avx2_256_32.lo `test -f 'src/sg_diag_avx2_256_32.c' || echo './'`src/sg_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_diag_avx2_256_32.lo `test -f 'src/sw_diag_avx2_256_32.c' || echo './'`src/sw_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_diag_avx2_256_64.lo `test -f 'src/sg_diag_avx2_256_64.c' || echo './'`src/sg_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_diag_avx2_256_64.lo `test -f 'src/sw_diag_avx2_256_64.c' || echo './'`src/sw_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_diag_avx2_256_16.lo `test -f 'src/sw_diag_avx2_256_16.c' || echo './'`src/sw_diag_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_diag_avx2_256_8.lo `test -f 'src/nw_diag_avx2_256_8.c' || echo './'`src/nw_diag_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_diag_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_diag_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_diag_avx2_256_32.lo `test -f 'src/nw_diag_avx2_256_32.c' || echo './'`src/nw_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_diag_avx2_256_8.lo `test -f 'src/sg_diag_avx2_256_8.c' || echo './'`src/sg_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_diag_avx2_256_8.lo `test -f 'src/sw_diag_avx2_256_8.c' || echo './'`src/sw_diag_avx2_256_8.c +/bin/sh 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+/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_striped_avx2_256_64.lo `test -f 'src/sg_striped_avx2_256_64.c' || echo './'`src/sg_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_striped_avx2_256_64.lo `test -f 'src/sw_striped_avx2_256_64.c' || echo './'`src/sw_striped_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_striped_avx2_256_64.lo 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-fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_striped_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_striped_avx2_256_16.lo `test -f 'src/sg_striped_avx2_256_16.c' || echo './'`src/sg_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_striped_avx2_256_16.lo `test -f 'src/sw_striped_avx2_256_16.c' || echo './'`src/sw_striped_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c 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src/.libs/libparasail_avx2_la-sg_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_striped_avx2_256_8.lo `test -f 'src/nw_striped_avx2_256_8.c' || echo './'`src/nw_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_scan_avx2_256_64.lo `test -f 'src/nw_stats_scan_avx2_256_64.c' || echo './'`src/nw_stats_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_scan_avx2_256_64.lo `test -f 'src/sg_stats_scan_avx2_256_64.c' || echo './'`src/sg_stats_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_scan_avx2_256_64.lo `test -f 'src/sg_stats_scan_avx2_256_64.c' || echo './'`src/sg_stats_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_scan_avx2_256_16.lo `test -f 'src/sw_stats_scan_avx2_256_16.c' || echo './'`src/sw_stats_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_scan_avx2_256_8.lo `test -f 'src/sw_stats_scan_avx2_256_8.c' || echo './'`src/sw_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_64.lo `test -f 'src/nw_stats_diag_avx2_256_64.c' || echo './'`src/nw_stats_diag_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_64.lo `test -f 'src/sg_stats_diag_avx2_256_64.c' || echo './'`src/sg_stats_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_diag_avx2_256_64.o +src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_scan_profile_avx2_256_64': +src/sw_stats_scan_avx2_256_64.c:359:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 359 | __m256i vHtM; + | ^~~~ +src/sw_stats_scan_avx2_256_64.c:360:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 360 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sw_stats_scan_avx2_256_64.c:14: +In function '_mm256_add_epi64', + inlined from 'parasail_sw_stats_scan_profile_avx2_256_64' at src/sw_stats_scan_avx2_256_64.c:436:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_scan_profile_avx2_256_64': +src/sw_stats_scan_avx2_256_64.c:361:17: note: 'vHtL' was declared here + 361 | __m256i vHtL; + | ^~~~ +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 401 | __m256i vHtM; + | ^~~~ +src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 402 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sg_stats_scan_avx2_256_64.c:13: +In function '_mm256_add_epi64', + inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here + 403 | __m256i vHtL; + | ^~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c +src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_scan_profile_avx2_256_64': +src/nw_stats_scan_avx2_256_64.c:366:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 366 | __m256i vHtM; + | ^~~~ +src/nw_stats_scan_avx2_256_64.c:367:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 367 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/nw_stats_scan_avx2_256_64.c:13: +In function '_mm256_add_epi64', + inlined from 'parasail_nw_stats_scan_profile_avx2_256_64' at src/nw_stats_scan_avx2_256_64.c:443:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_scan_profile_avx2_256_64': +src/nw_stats_scan_avx2_256_64.c:368:17: note: 'vHtL' was declared here + 368 | __m256i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_diag_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_diag_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_diag_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sw_stats_scan_avx2_256_32.c:14: In function '_mm256_blendv_epi8', @@ -4682,56 +4764,10 @@ src/sw_stats_scan_avx2_256_32.c:333:17: note: 'vHtL' was declared here 333 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_64.o -src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_scan_profile_avx2_256_64': -src/sw_stats_scan_avx2_256_64.c:359:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 359 | __m256i vHtM; - | ^~~~ -src/sw_stats_scan_avx2_256_64.c:360:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 360 | __m256i vHtS; - | ^~~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_64.c:14: -In function '_mm256_add_epi64', - inlined from 'parasail_sw_stats_scan_profile_avx2_256_64' at src/sw_stats_scan_avx2_256_64.c:436:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_scan_profile_avx2_256_64': -src/sw_stats_scan_avx2_256_64.c:361:17: note: 'vHtL' was declared here - 361 | __m256i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c -src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_scan_profile_avx2_256_64': -src/nw_stats_scan_avx2_256_64.c:366:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 366 | __m256i vHtM; - | ^~~~ -src/nw_stats_scan_avx2_256_64.c:367:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 367 | __m256i vHtS; - | ^~~~ -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_64.c:13: -In function '_mm256_add_epi64', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_64' at src/nw_stats_scan_avx2_256_64.c:443:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_scan_profile_avx2_256_64': -src/nw_stats_scan_avx2_256_64.c:368:17: note: 'vHtL' was declared here - 368 | __m256i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_16.c:14: + from src/nw_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4739,12 +4775,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here - 348 | __m256i vHtM; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here + 337 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4752,31 +4788,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here - 349 | __m256i vHtS; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here + 338 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi16', - inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here - 350 | __m256i vHtL; +In function '_mm256_add_epi32', + inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here + 339 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_64.lo `test -f 'src/nw_trace_scan_avx2_256_64.c' || echo './'`src/nw_trace_scan_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_64.lo `test -f 'src/sg_trace_scan_avx2_256_64.c' || echo './'`src/sg_trace_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_64.lo `test -f 'src/sw_trace_scan_avx2_256_64.c' || echo './'`src/sw_trace_scan_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_16.c:13: + from src/sw_stats_scan_avx2_256_16.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:428:19: + inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4784,12 +4812,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:353:17: note: 'vHtM' was declared here - 353 | __m256i vHtM; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here + 348 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:429:19: + inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4797,19 +4825,20 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:354:17: note: 'vHtS' was declared here - 354 | __m256i vHtS; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here + 349 | __m256i vHtS; | ^~~~ In function '_mm256_adds_epi16', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:430:19: + inlined from 'parasail_sw_stats_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:355:17: note: 'vHtL' was declared here - 355 | __m256i vHtL; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here + 350 | __m256i vHtL; | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sg_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', @@ -4847,11 +4876,10 @@ src/sg_stats_scan_avx2_256_32.c:361:17: note: 'vHtL' was declared here 361 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_8.o In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_8.c:13: + from src/nw_stats_scan_avx2_256_8.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:460:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4859,12 +4887,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here - 407 | __m256i vHtM; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:385:17: note: 'vHtM' was declared here + 385 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:461:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -4872,81 +4900,22 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here - 408 | __m256i vHtS; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:386:17: note: 'vHtS' was declared here + 386 | __m256i vHtS; | ^~~~ In function '_mm256_adds_epi8', - inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:462:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here - 409 | __m256i vHtL; - | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_8.o -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_32.c:13: -In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 210 | (__v32qi)__Y, - | ~~~~~~~~~~~~~ - 211 | (__v32qi)__M); - | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here - 337 | __m256i vHtM; - | ^~~~ -In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 210 | (__v32qi)__Y, - | ~~~~~~~~~~~~~ - 211 | (__v32qi)__M); - | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here - 338 | __m256i vHtS; - | ^~~~ -In function '_mm256_add_epi32', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here - 339 | __m256i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_32.lo `test -f 'src/nw_trace_scan_avx2_256_32.c' || echo './'`src/nw_trace_scan_avx2_256_32.c -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 401 | __m256i vHtM; - | ^~~~ -src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 402 | __m256i vHtS; - | ^~~~ -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_64.c:13: -In function '_mm256_add_epi64', - inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here - 403 | __m256i vHtL; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:387:17: note: 'vHtL' was declared here + 387 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_32.lo `test -f 'src/sg_trace_scan_avx2_256_32.c' || echo './'`src/sg_trace_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sw_stats_scan_avx2_256_8.c:14: In function '_mm256_blendv_epi8', @@ -4984,7 +4953,6 @@ src/sw_stats_scan_avx2_256_8.c:383:17: note: 'vHtL' was declared here 383 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_32.o In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sg_stats_scan_avx2_256_16.c:13: In function '_mm256_blendv_epi8', @@ -5022,20 +4990,12 @@ src/sg_stats_scan_avx2_256_16.c:377:17: note: 'vHtL' was declared here 377 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_32.lo `test -f 'src/sw_trace_scan_avx2_256_32.c' || echo './'`src/sw_trace_scan_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_16.lo `test -f 'src/nw_trace_scan_avx2_256_16.c' || echo './'`src/nw_trace_scan_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_16.lo `test -f 'src/sg_trace_scan_avx2_256_16.c' || echo './'`src/sg_trace_scan_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_16.lo `test -f 'src/sw_trace_scan_avx2_256_16.c' || echo './'`src/sw_trace_scan_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_8.lo `test -f 'src/nw_trace_scan_avx2_256_8.c' || echo './'`src/nw_trace_scan_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_8.c:13: + from src/nw_stats_scan_avx2_256_16.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:460:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:428:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5043,12 +5003,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:385:17: note: 'vHtM' was declared here - 385 | __m256i vHtM; +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:353:17: note: 'vHtM' was declared here + 353 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:461:19: + inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:429:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5056,194 +5016,271 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:386:17: note: 'vHtS' was declared here - 386 | __m256i vHtS; +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:354:17: note: 'vHtS' was declared here + 354 | __m256i vHtS; + | ^~~~ +In function '_mm256_adds_epi16', + inlined from 'parasail_nw_stats_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:430:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:355:17: note: 'vHtL' was declared here + 355 | __m256i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_64.o +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sg_stats_scan_avx2_256_8.c:13: +In function '_mm256_blendv_epi8', + inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 210 | (__v32qi)__Y, + | ~~~~~~~~~~~~~ + 211 | (__v32qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here + 407 | __m256i vHtM; + | ^~~~ +In function '_mm256_blendv_epi8', + inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 210 | (__v32qi)__Y, + | ~~~~~~~~~~~~~ + 211 | (__v32qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here + 408 | __m256i vHtS; | ^~~~ In function '_mm256_adds_epi8', - inlined from 'parasail_nw_stats_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:462:19: + inlined from 'parasail_sg_flags_stats_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:387:17: note: 'vHtL' was declared here - 387 | __m256i vHtL; +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here + 409 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_8.lo `test -f 'src/sg_trace_scan_avx2_256_8.c' || echo './'`src/sg_trace_scan_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_8.lo `test -f 'src/sw_trace_scan_avx2_256_8.c' || echo './'`src/sw_trace_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_64.lo `test -f 'src/nw_trace_scan_avx2_256_64.c' || echo './'`src/nw_trace_scan_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_64.lo `test -f 'src/sg_trace_scan_avx2_256_64.c' || echo './'`src/sg_trace_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_64.lo `test -f 'src/sw_trace_scan_avx2_256_64.c' || echo './'`src/sw_trace_scan_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_32.lo `test -f 'src/nw_trace_scan_avx2_256_32.c' || echo './'`src/nw_trace_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_32.lo `test -f 'src/sg_trace_scan_avx2_256_32.c' || echo './'`src/sg_trace_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_32.lo `test -f 'src/sw_trace_scan_avx2_256_32.c' || echo './'`src/sw_trace_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_16.lo `test -f 'src/nw_trace_scan_avx2_256_16.c' || echo './'`src/nw_trace_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_16.lo `test -f 'src/sg_trace_scan_avx2_256_16.c' || echo './'`src/sg_trace_scan_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_16.lo `test -f 'src/sw_trace_scan_avx2_256_16.c' || echo './'`src/sw_trace_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_scan_avx2_256_8.lo `test -f 'src/nw_trace_scan_avx2_256_8.c' || echo './'`src/nw_trace_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_scan_avx2_256_8.lo `test -f 'src/sg_trace_scan_avx2_256_8.c' || echo './'`src/sg_trace_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_scan_avx2_256_8.lo `test -f 'src/sw_trace_scan_avx2_256_8.c' || echo './'`src/sw_trace_scan_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_64.lo `test -f 'src/nw_trace_diag_avx2_256_64.c' || echo './'`src/nw_trace_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_64.lo `test -f 'src/sg_trace_diag_avx2_256_64.c' || echo './'`src/sg_trace_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_scan_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_64.lo `test -f 'src/nw_trace_diag_avx2_256_64.c' || echo './'`src/nw_trace_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_64.lo `test -f 'src/sg_trace_diag_avx2_256_64.c' || echo './'`src/sg_trace_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_64.lo `test -f 'src/sw_trace_diag_avx2_256_64.c' || echo './'`src/sw_trace_diag_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_64.lo `test -f 'src/sw_trace_diag_avx2_256_64.c' || echo './'`src/sw_trace_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_32.lo `test -f 'src/nw_trace_diag_avx2_256_32.c' || echo './'`src/nw_trace_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_32.lo `test -f 'src/sg_trace_diag_avx2_256_32.c' || echo './'`src/sg_trace_diag_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_32.lo `test -f 'src/nw_trace_diag_avx2_256_32.c' || echo './'`src/nw_trace_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_32.lo `test -f 'src/sw_trace_diag_avx2_256_32.c' || echo './'`src/sw_trace_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_16.lo `test -f 'src/nw_trace_diag_avx2_256_16.c' || echo './'`src/nw_trace_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_16.lo `test -f 'src/sg_trace_diag_avx2_256_16.c' || echo './'`src/sg_trace_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_16.lo `test -f 'src/sw_trace_diag_avx2_256_16.c' || echo './'`src/sw_trace_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_32.lo `test -f 'src/sg_trace_diag_avx2_256_32.c' || echo './'`src/sg_trace_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_32.lo `test -f 'src/sw_trace_diag_avx2_256_32.c' || echo './'`src/sw_trace_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_diag_avx2_256_16.lo `test -f 'src/nw_trace_diag_avx2_256_16.c' || echo './'`src/nw_trace_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_diag_avx2_256_16.lo `test -f 'src/sg_trace_diag_avx2_256_16.c' || echo './'`src/sg_trace_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_diag_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_diag_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_16.lo `test -f 'src/sw_trace_diag_avx2_256_16.c' || echo './'`src/sw_trace_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_diag_avx2_256_8.lo `test -f 'src/sw_trace_diag_avx2_256_8.c' || echo './'`src/sw_trace_diag_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_diag_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-nw_trace_striped_avx2_256_64.lo `test -f 'src/nw_trace_striped_avx2_256_64.c' || echo './'`src/nw_trace_striped_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_diag_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_diag_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_striped_avx2_256_64.lo `test -f 'src/sg_trace_striped_avx2_256_64.c' || echo './'`src/sg_trace_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile 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'./'`src/nw_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_striped_avx2_256_16.lo `test -f 'src/sw_trace_striped_avx2_256_16.c' || echo './'`src/sw_trace_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_striped_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sg_trace_striped_avx2_256_8.lo `test -f 'src/sg_trace_striped_avx2_256_8.c' || echo './'`src/sg_trace_striped_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_trace_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sg_trace_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_la-sw_trace_striped_avx2_256_8.lo `test -f 'src/sw_trace_striped_avx2_256_8.c' || echo './'`src/sw_trace_striped_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_trace_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-nw_trace_striped_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_trace_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_la-sw_trace_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_scan_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_scan_avx2_256_16.lo `test -f 'src/nw_scan_avx2_256_16.c' || echo './'`src/nw_scan_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_16.lo `test -f 'src/sg_scan_avx2_256_16.c' || echo './'`src/sg_scan_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 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libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_scan_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_64.lo `test -f 'src/sg_diag_avx2_256_64.c' || echo './'`src/sg_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_scan_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_diag_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_64.lo `test -f 'src/sw_diag_avx2_256_64.c' || echo './'`src/sw_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_diag_avx2_256_32.lo `test -f 'src/nw_diag_avx2_256_32.c' || echo './'`src/nw_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_32.lo `test -f 'src/sg_diag_avx2_256_32.c' || echo './'`src/sg_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_32.lo `test -f 'src/sw_diag_avx2_256_32.c' || echo './'`src/sw_diag_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_diag_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_64.lo `test -f 'src/sw_diag_avx2_256_64.c' || echo './'`src/sw_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_diag_avx2_256_32.lo `test -f 'src/nw_diag_avx2_256_32.c' || echo './'`src/nw_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_32.lo `test -f 'src/sg_diag_avx2_256_32.c' || echo './'`src/sg_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_32.lo `test -f 'src/sw_diag_avx2_256_32.c' || echo './'`src/sw_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_diag_avx2_256_16.lo `test -f 'src/nw_diag_avx2_256_16.c' || echo './'`src/nw_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_16.lo `test -f 'src/sg_diag_avx2_256_16.c' || echo './'`src/sg_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_diag_avx2_256_16.lo `test -f 'src/nw_diag_avx2_256_16.c' || echo './'`src/nw_diag_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_diag_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_16.lo `test -f 'src/sg_diag_avx2_256_16.c' || echo './'`src/sg_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_16.lo `test -f 'src/sw_diag_avx2_256_16.c' || echo './'`src/sw_diag_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_diag_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_diag_avx2_256_8.lo `test -f 'src/nw_diag_avx2_256_8.c' || echo './'`src/nw_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_16.lo `test -f 'src/sw_diag_avx2_256_16.c' || echo './'`src/sw_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_diag_avx2_256_8.lo `test -f 'src/sg_diag_avx2_256_8.c' || echo './'`src/sg_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_64.lo `test -f 'src/sg_striped_avx2_256_64.c' || echo './'`src/sg_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_64.lo `test -f 'src/sw_striped_avx2_256_64.c' || echo './'`src/sw_striped_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_diag_avx2_256_8.lo `test -f 'src/sw_diag_avx2_256_8.c' || echo './'`src/sw_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_diag_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_32.lo `test -f 'src/nw_striped_avx2_256_32.c' || echo './'`src/nw_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_64.lo `test -f 'src/nw_striped_avx2_256_64.c' || echo './'`src/nw_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_64.lo `test -f 'src/sg_striped_avx2_256_64.c' || echo './'`src/sg_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_64.lo `test -f 'src/sw_striped_avx2_256_64.c' || echo './'`src/sw_striped_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_diag_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_32.lo `test -f 'src/sg_striped_avx2_256_32.c' || echo './'`src/sg_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_32.lo `test -f 'src/nw_striped_avx2_256_32.c' || echo './'`src/nw_striped_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_32.lo `test -f 'src/sw_striped_avx2_256_32.c' || echo './'`src/sw_striped_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_32.lo `test -f 'src/sg_striped_avx2_256_32.c' || echo './'`src/sg_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_32.lo `test -f 'src/sw_striped_avx2_256_32.c' || echo './'`src/sw_striped_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_16.lo `test -f 'src/nw_striped_avx2_256_16.c' || echo './'`src/nw_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_16.lo `test -f 'src/nw_striped_avx2_256_16.c' || echo './'`src/nw_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_16.lo `test -f 'src/sg_striped_avx2_256_16.c' || echo './'`src/sg_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_16.lo `test -f 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echo './'`src/sw_stats_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_32.lo `test -f 'src/nw_stats_scan_avx2_256_32.c' || echo './'`src/nw_stats_scan_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_32.lo `test -f 'src/sg_stats_scan_avx2_256_32.c' || echo './'`src/sg_stats_scan_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_16.lo `test -f 'src/sw_striped_avx2_256_16.c' || echo './'`src/sw_striped_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_striped_avx2_256_8.lo `test -f 'src/nw_striped_avx2_256_8.c' || echo './'`src/nw_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_striped_avx2_256_8.lo `test -f 'src/sg_striped_avx2_256_8.c' || echo './'`src/sg_striped_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_striped_avx2_256_8.lo `test -f 'src/sw_striped_avx2_256_8.c' || echo './'`src/sw_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_64.lo `test -f 'src/nw_stats_scan_avx2_256_64.c' || echo './'`src/nw_stats_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_64.lo `test -f 'src/sg_stats_scan_avx2_256_64.c' || echo './'`src/sg_stats_scan_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_striped_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_striped_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_32.lo `test -f 'src/sw_stats_scan_avx2_256_32.c' || echo './'`src/sw_stats_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_64.lo `test -f 'src/sw_stats_scan_avx2_256_64.c' || echo './'`src/sw_stats_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_scan_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_scan_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_striped_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.lo `test -f 'src/nw_stats_scan_avx2_256_16.c' || echo './'`src/nw_stats_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_32.lo `test -f 'src/nw_stats_scan_avx2_256_32.c' || echo './'`src/nw_stats_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_32.lo `test -f 'src/sg_stats_scan_avx2_256_32.c' || echo './'`src/sg_stats_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_32.lo `test -f 'src/sw_stats_scan_avx2_256_32.c' || echo './'`src/sw_stats_scan_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_16.lo `test -f 'src/sg_stats_scan_avx2_256_16.c' || echo './'`src/sg_stats_scan_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_16.lo `test -f 'src/sw_stats_scan_avx2_256_16.c' || echo './'`src/sw_stats_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_8.lo `test -f 'src/nw_stats_scan_avx2_256_8.c' || echo './'`src/nw_stats_scan_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_8.lo `test -f 'src/sg_stats_scan_avx2_256_8.c' || echo './'`src/sg_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.lo `test -f 'src/nw_stats_scan_avx2_256_16.c' || echo './'`src/nw_stats_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_16.lo `test -f 'src/sg_stats_scan_avx2_256_16.c' || echo './'`src/sg_stats_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_16.lo `test -f 'src/sw_stats_scan_avx2_256_16.c' || echo './'`src/sw_stats_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_8.lo `test -f 'src/sw_stats_scan_avx2_256_8.c' || echo './'`src/sw_stats_scan_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_scan_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_8.lo `test -f 'src/nw_stats_scan_avx2_256_8.c' || echo './'`src/nw_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_8.lo `test -f 'src/sg_stats_scan_avx2_256_8.c' || echo './'`src/sg_stats_scan_avx2_256_8.c +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 401 | __m256i vHtM; + | ^~~~ +src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 402 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sg_stats_scan_avx2_256_64.c:13: +In function '_mm256_add_epi64', + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here + 403 | __m256i vHtL; + | ^~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_8.lo `test -f 'src/sw_stats_scan_avx2_256_8.c' || echo './'`src/sw_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_64.lo `test -f 'src/nw_stats_diag_avx2_256_64.c' || echo './'`src/nw_stats_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_64.lo `test -f 'src/sg_stats_diag_avx2_256_64.c' || echo './'`src/sg_stats_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_64.lo `test -f 'src/nw_stats_diag_avx2_256_64.c' || echo './'`src/nw_stats_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_64.lo `test -f 'src/sg_stats_diag_avx2_256_64.c' || echo './'`src/sg_stats_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_64': src/sw_stats_scan_avx2_256_64.c:359:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 359 | __m256i vHtM; @@ -5255,7 +5292,6 @@ from src/sw_stats_scan_avx2_256_64.c:14: In function '_mm256_add_epi64', inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_64' at src/sw_stats_scan_avx2_256_64.c:436:19: -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_64.o /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); | ^~~~~~~~~~~ @@ -5263,11 +5299,31 @@ src/sw_stats_scan_avx2_256_64.c:361:17: note: 'vHtL' was declared here 361 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c +src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_64': +src/nw_stats_scan_avx2_256_64.c:366:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 366 | __m256i vHtM; + | ^~~~ +src/nw_stats_scan_avx2_256_64.c:367:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 367 | __m256i vHtS; + | ^~~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_32.c:14: + from src/nw_stats_scan_avx2_256_64.c:13: +In function '_mm256_add_epi64', + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_64' at src/nw_stats_scan_avx2_256_64.c:443:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_64': +src/nw_stats_scan_avx2_256_64.c:368:17: note: 'vHtL' was declared here + 368 | __m256i vHtL; + | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_32.o +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/nw_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:406:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5275,12 +5331,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:331:17: note: 'vHtM' was declared here - 331 | __m256i vHtM; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here + 337 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:407:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5288,25 +5344,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:332:17: note: 'vHtS' was declared here - 332 | __m256i vHtS; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here + 338 | __m256i vHtS; | ^~~~ In function '_mm256_add_epi32', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:408:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); | ^~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:333:17: note: 'vHtL' was declared here - 333 | __m256i vHtL; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here + 339 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_16.c:13: + from src/sg_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:428:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:434:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5314,12 +5368,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:353:17: note: 'vHtM' was declared here - 353 | __m256i vHtM; +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:359:17: note: 'vHtM' was declared here + 359 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:429:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:435:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5327,23 +5381,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:354:17: note: 'vHtS' was declared here - 354 | __m256i vHtS; +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:360:17: note: 'vHtS' was declared here + 360 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi16', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:430:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': -src/nw_stats_scan_avx2_256_16.c:355:17: note: 'vHtL' was declared here - 355 | __m256i vHtL; +In function '_mm256_add_epi32', + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:436:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:361:17: note: 'vHtL' was declared here + 361 | __m256i vHtL; | ^~~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_8.c:13: + from src/sw_stats_scan_avx2_256_32.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:406:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5351,12 +5405,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here - 407 | __m256i vHtM; +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:331:17: note: 'vHtM' was declared here + 331 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:407:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5364,20 +5418,20 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here - 408 | __m256i vHtS; +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:332:17: note: 'vHtS' was declared here + 332 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here - 409 | __m256i vHtL; +In function '_mm256_add_epi32', + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:333:17: note: 'vHtL' was declared here + 333 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/nw_stats_scan_avx2_256_8.c:13: In function '_mm256_blendv_epi8', @@ -5415,12 +5469,10 @@ src/nw_stats_scan_avx2_256_8.c:387:17: note: 'vHtL' was declared here 387 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_16.c:13: + from src/sw_stats_scan_avx2_256_16.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:450:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5428,12 +5480,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': -src/sg_stats_scan_avx2_256_16.c:375:17: note: 'vHtM' was declared here - 375 | __m256i vHtM; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here + 348 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:451:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5441,43 +5493,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': -src/sg_stats_scan_avx2_256_16.c:376:17: note: 'vHtS' was declared here - 376 | __m256i vHtS; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here + 349 | __m256i vHtS; | ^~~~ In function '_mm256_adds_epi16', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:452:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': -src/sg_stats_scan_avx2_256_16.c:377:17: note: 'vHtL' was declared here - 377 | __m256i vHtL; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here + 350 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_8.c:14: + from src/sg_stats_scan_avx2_256_16.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:456:19: -src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_64': -src/nw_stats_scan_avx2_256_64.c:366:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 366 | __m256i vHtM; - | ^~~~ -src/nw_stats_scan_avx2_256_64.c:367:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 367 | __m256i vHtS; - | ^~~~ -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_64.c:13: -In function '_mm256_add_epi64', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_64' at src/nw_stats_scan_avx2_256_64.c:443:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_64': -src/nw_stats_scan_avx2_256_64.c:368:17: note: 'vHtL' was declared here - 368 | __m256i vHtL; - | ^~~~ + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:450:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5485,12 +5517,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': -src/sw_stats_scan_avx2_256_8.c:381:17: note: 'vHtM' was declared here - 381 | __m256i vHtM; +src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': +src/sg_stats_scan_avx2_256_16.c:375:17: note: 'vHtM' was declared here + 375 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:457:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:451:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5498,34 +5530,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': -src/sw_stats_scan_avx2_256_8.c:382:17: note: 'vHtS' was declared here - 382 | __m256i vHtS; +src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': +src/sg_stats_scan_avx2_256_16.c:376:17: note: 'vHtS' was declared here + 376 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:458:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); +In function '_mm256_adds_epi16', + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16' at src/sg_stats_scan_avx2_256_16.c:452:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': -src/sw_stats_scan_avx2_256_8.c:383:17: note: 'vHtL' was declared here - 383 | __m256i vHtL; +src/sg_stats_scan_avx2_256_16.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_16': +src/sg_stats_scan_avx2_256_16.c:377:17: note: 'vHtL' was declared here + 377 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_64.lo `test -f 'src/nw_scan_avx2_256_64.c' || echo './'`src/nw_scan_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_16.c:14: + from src/nw_stats_scan_avx2_256_16.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:428:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5533,12 +5554,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here - 348 | __m256i vHtM; +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:353:17: note: 'vHtM' was declared here + 353 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:429:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5546,20 +5567,37 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here - 349 | __m256i vHtS; +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:354:17: note: 'vHtS' was declared here + 354 | __m256i vHtS; | ^~~~ In function '_mm256_adds_epi16', - inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: + inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_16' at src/nw_stats_scan_avx2_256_16.c:430:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/nw_stats_scan_avx2_256_16.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_16': +src/nw_stats_scan_avx2_256_16.c:355:17: note: 'vHtL' was declared here + 355 | __m256i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_diag_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_32.c:13: + from src/sg_stats_scan_avx2_256_8.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_16': + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5567,16 +5605,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here - 350 | __m256i vHtL; - | ^~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c -src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here - 337 | __m256i vHtM; +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here + 407 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5584,55 +5618,23 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here - 338 | __m256i vHtS; - | ^~~~ -In function '_mm256_add_epi32', - inlined from 'parasail_nw_stats_table_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_table_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here - 339 | __m256i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 401 | __m256i vHtM; - | ^~~~ -src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 402 | __m256i vHtS; +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here + 408 | __m256i vHtS; | ^~~~ -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_64.c:13: -In function '_mm256_add_epi64', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here - 403 | __m256i vHtL; +In function '_mm256_adds_epi8', + inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here + 409 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_64.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_16.lo `test -f 'src/nw_scan_avx2_256_16.c' || echo './'`src/nw_scan_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_16.lo `test -f 'src/sg_scan_avx2_256_16.c' || echo './'`src/sg_scan_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_scan_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_32.c:13: + from src/sw_stats_scan_avx2_256_8.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:434:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:456:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5640,12 +5642,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:359:17: note: 'vHtM' was declared here - 359 | __m256i vHtM; +src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': +src/sw_stats_scan_avx2_256_8.c:381:17: note: 'vHtM' was declared here + 381 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:435:19: + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:457:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5653,163 +5655,185 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:360:17: note: 'vHtS' was declared here - 360 | __m256i vHtS; +src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': +src/sw_stats_scan_avx2_256_8.c:382:17: note: 'vHtS' was declared here + 382 | __m256i vHtS; | ^~~~ -In function '_mm256_add_epi32', - inlined from 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:436:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_table_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:361:17: note: 'vHtL' was declared here - 361 | __m256i vHtL; +In function '_mm256_adds_epi8', + inlined from 'parasail_sw_stats_table_scan_profile_avx2_256_8' at src/sw_stats_scan_avx2_256_8.c:458:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_table_scan_profile_avx2_256_8': +src/sw_stats_scan_avx2_256_8.c:383:17: note: 'vHtL' was declared here + 383 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_TABLE=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_64.lo `test -f 'src/nw_scan_avx2_256_64.c' || echo './'`src/nw_scan_avx2_256_64.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_64.lo `test -f 'src/sg_scan_avx2_256_64.c' || echo './'`src/sg_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_64.lo `test -f 'src/sw_scan_avx2_256_64.c' || echo './'`src/sw_scan_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_32.lo `test -f 'src/nw_scan_avx2_256_32.c' || echo './'`src/nw_scan_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_32.lo `test -f 'src/sg_scan_avx2_256_32.c' || echo './'`src/sg_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_32.lo `test -f 'src/sw_scan_avx2_256_32.c' || echo './'`src/sw_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_16.lo `test -f 'src/nw_scan_avx2_256_16.c' || echo './'`src/nw_scan_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_16.lo `test -f 'src/sg_scan_avx2_256_16.c' || echo './'`src/sg_scan_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_scan_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_16.lo `test -f 'src/sw_scan_avx2_256_16.c' || echo './'`src/sw_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_scan_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_8.lo `test -f 'src/nw_scan_avx2_256_8.c' || echo './'`src/nw_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_8.lo `test -f 'src/sg_scan_avx2_256_8.c' || echo './'`src/sg_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_64.lo `test -f 'src/nw_diag_avx2_256_64.c' || echo './'`src/nw_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_8.lo `test -f 'src/sw_scan_avx2_256_8.c' || echo './'`src/sw_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o 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-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_64.lo `test -f 'src/sw_diag_avx2_256_64.c' || echo './'`src/sw_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_64.lo `test -f 'src/sw_diag_avx2_256_64.c' || echo './'`src/sw_diag_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_32.lo `test -f 'src/nw_diag_avx2_256_32.c' || echo './'`src/nw_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_32.lo `test -f 'src/sg_diag_avx2_256_32.c' || echo './'`src/sg_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_32.lo `test -f 'src/sw_diag_avx2_256_32.c' || echo './'`src/sw_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_32.lo `test -f 'src/nw_diag_avx2_256_32.c' || echo './'`src/nw_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_32.lo `test -f 'src/sg_diag_avx2_256_32.c' || echo './'`src/sg_diag_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_32.lo `test -f 'src/sw_diag_avx2_256_32.c' || echo './'`src/sw_diag_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_diag_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_16.lo `test -f 'src/nw_diag_avx2_256_16.c' || echo './'`src/nw_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_diag_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_16.lo `test -f 'src/nw_diag_avx2_256_16.c' || echo './'`src/nw_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_16.lo `test -f 'src/sg_diag_avx2_256_16.c' || echo './'`src/sg_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_16.lo `test -f 'src/sw_diag_avx2_256_16.c' || echo './'`src/sw_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_8.lo `test -f 'src/nw_diag_avx2_256_8.c' || echo './'`src/nw_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_8.lo `test -f 'src/sg_diag_avx2_256_8.c' || echo './'`src/sg_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_16.lo `test -f 'src/sg_diag_avx2_256_16.c' || echo './'`src/sg_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_diag_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_16.lo `test -f 'src/sw_diag_avx2_256_16.c' || echo './'`src/sw_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_diag_avx2_256_8.lo `test -f 'src/nw_diag_avx2_256_8.c' || echo './'`src/nw_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_diag_avx2_256_8.lo `test -f 'src/sg_diag_avx2_256_8.c' || echo './'`src/sg_diag_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_diag_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_8.lo `test -f 'src/sw_diag_avx2_256_8.c' || echo './'`src/sw_diag_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_striped_avx2_256_64.lo `test -f 'src/nw_striped_avx2_256_64.c' || echo './'`src/nw_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 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-Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_diag_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_diag_avx2_256_8.lo `test -f 'src/sw_diag_avx2_256_8.c' || echo './'`src/sw_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_striped_avx2_256_64.lo `test -f 'src/sw_striped_avx2_256_64.c' || echo './'`src/sw_striped_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_striped_avx2_256_32.lo `test -f 'src/nw_striped_avx2_256_32.c' || echo './'`src/nw_striped_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_striped_avx2_256_32.lo `test -f 'src/sw_striped_avx2_256_32.c' || echo './'`src/sw_striped_avx2_256_32.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_striped_avx2_256_16.lo `test -f 'src/nw_striped_avx2_256_16.c' || echo './'`src/nw_striped_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_striped_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_striped_avx2_256_32.lo `test -f 'src/sw_striped_avx2_256_32.c' || echo './'`src/sw_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_striped_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c 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-Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_striped_avx2_256_16.lo `test -f 'src/sg_striped_avx2_256_16.c' || echo './'`src/sg_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration 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-I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_64.lo `test -f 'src/sg_stats_scan_avx2_256_64.c' || echo './'`src/sg_stats_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_64.c -fPIC -DPIC -o 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-ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_64.lo `test -f 'src/sw_stats_scan_avx2_256_64.c' || echo './'`src/sw_stats_scan_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_32.lo `test -f 'src/nw_stats_scan_avx2_256_32.c' || echo './'`src/nw_stats_scan_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_16.lo `test -f 'src/sg_stats_scan_avx2_256_16.c' || echo './'`src/sg_stats_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_32.lo `test -f 'src/sg_stats_scan_avx2_256_32.c' || echo './'`src/sg_stats_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_32.lo `test -f 'src/sw_stats_scan_avx2_256_32.c' || echo './'`src/sw_stats_scan_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_16.lo `test -f 'src/nw_stats_scan_avx2_256_16.c' || echo './'`src/nw_stats_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_16.lo `test -f 'src/sw_stats_scan_avx2_256_16.c' || echo './'`src/sw_stats_scan_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_8.lo `test -f 'src/nw_stats_scan_avx2_256_8.c' || echo './'`src/nw_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_16.lo `test -f 'src/sg_stats_scan_avx2_256_16.c' || echo './'`src/sg_stats_scan_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_16.lo `test -f 'src/sw_stats_scan_avx2_256_16.c' || echo './'`src/sw_stats_scan_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_8.lo `test -f 'src/sg_stats_scan_avx2_256_8.c' || echo './'`src/sg_stats_scan_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_8.lo `test -f 'src/sw_stats_scan_avx2_256_8.c' || echo './'`src/sw_stats_scan_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_8.lo `test -f 'src/nw_stats_scan_avx2_256_8.c' || echo './'`src/nw_stats_scan_avx2_256_8.c +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 401 | __m256i vHtM; + | ^~~~ +src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 402 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sg_stats_scan_avx2_256_64.c:13: +In function '_mm256_add_epi64', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64': +src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here + 403 | __m256i vHtL; + | ^~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_16.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_64.lo `test -f 'src/nw_stats_diag_avx2_256_64.c' || echo './'`src/nw_stats_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_8.lo `test -f 'src/sg_stats_scan_avx2_256_8.c' || echo './'`src/sg_stats_scan_avx2_256_8.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_scan_avx2_256_8.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_scan_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_8.lo `test -f 'src/sw_stats_scan_avx2_256_8.c' || echo './'`src/sw_stats_scan_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_64.lo `test -f 'src/nw_stats_diag_avx2_256_64.c' || echo './'`src/nw_stats_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_scan_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_scan_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_64.lo `test -f 'src/sg_stats_diag_avx2_256_64.c' || echo './'`src/sg_stats_diag_avx2_256_64.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_64.lo `test -f 'src/sg_stats_diag_avx2_256_64.c' || echo './'`src/sg_stats_diag_avx2_256_64.c +src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64': +src/sw_stats_scan_avx2_256_64.c:359:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 359 | __m256i vHtM; + | ^~~~ +src/sw_stats_scan_avx2_256_64.c:360:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 360 | __m256i vHtS; + | ^~~~ +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sw_stats_scan_avx2_256_64.c:14: +In function '_mm256_add_epi64', + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64' at src/sw_stats_scan_avx2_256_64.c:436:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64': +src/sw_stats_scan_avx2_256_64.c:361:17: note: 'vHtL' was declared here + 361 | __m256i vHtL; + | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_64.lo `test -f 'src/sw_stats_diag_avx2_256_64.c' || echo './'`src/sw_stats_diag_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_32.lo `test -f 'src/nw_stats_diag_avx2_256_32.c' || echo './'`src/nw_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_64.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_32.lo `test -f 'src/sg_stats_diag_avx2_256_32.c' || echo './'`src/sg_stats_diag_avx2_256_32.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_32.lo `test -f 'src/sw_stats_diag_avx2_256_32.c' || echo './'`src/sw_stats_diag_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_32.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_16.lo `test -f 'src/nw_stats_diag_avx2_256_16.c' || echo './'`src/nw_stats_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_16.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_8.o -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_32.c:13: -In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 210 | (__v32qi)__Y, - | ~~~~~~~~~~~~~ - 211 | (__v32qi)__M); - | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here - 337 | __m256i vHtM; - | ^~~~ -In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 210 | (__v32qi)__Y, - | ~~~~~~~~~~~~~ - 211 | (__v32qi)__M); - | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here - 338 | __m256i vHtS; - | ^~~~ -In function '_mm256_add_epi32', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); - | ^~~~~~~~~~~ -src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': -src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here - 339 | __m256i vHtL; - | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c src/nw_stats_scan_avx2_256_64.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_64': src/nw_stats_scan_avx2_256_64.c:366:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 366 | __m256i vHtM; @@ -5828,13 +5852,11 @@ src/nw_stats_scan_avx2_256_64.c:368:17: note: 'vHtL' was declared here 368 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_16.o In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/nw_stats_scan_avx2_256_8.c:13: + from src/sw_stats_scan_avx2_256_32.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:460:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:406:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5842,12 +5864,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:385:17: note: 'vHtM' was declared here - 385 | __m256i vHtM; +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:331:17: note: 'vHtM' was declared here + 331 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:461:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:407:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5855,18 +5877,18 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:386:17: note: 'vHtS' was declared here - 386 | __m256i vHtS; +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:332:17: note: 'vHtS' was declared here + 332 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi8', - inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:462:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': -src/nw_stats_scan_avx2_256_8.c:387:17: note: 'vHtL' was declared here - 387 | __m256i vHtL; +In function '_mm256_add_epi32', + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:408:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); + | ^~~~~~~~~~~ +src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': +src/sw_stats_scan_avx2_256_32.c:333:17: note: 'vHtL' was declared here + 333 | __m256i vHtL; | ^~~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/nw_stats_scan_avx2_256_16.c:13: @@ -5905,11 +5927,10 @@ src/nw_stats_scan_avx2_256_16.c:355:17: note: 'vHtL' was declared here 355 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_16.c:14: + from src/nw_stats_scan_avx2_256_8.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:460:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5917,12 +5938,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here - 348 | __m256i vHtM; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:385:17: note: 'vHtM' was declared here + 385 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:461:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5930,44 +5951,24 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here - 349 | __m256i vHtS; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:386:17: note: 'vHtS' was declared here + 386 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi16', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); +In function '_mm256_adds_epi8', + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8' at src/nw_stats_scan_avx2_256_8.c:462:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': -src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here - 350 | __m256i vHtL; +src/nw_stats_scan_avx2_256_8.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_8': +src/nw_stats_scan_avx2_256_8.c:387:17: note: 'vHtL' was declared here + 387 | __m256i vHtL; | ^~~~ -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_64.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_32.o -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c -/bin/bash ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o contrib/sais-lite-lcp/sais.lo contrib/sais-lite-lcp/sais.c -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_32.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_8.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_16.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c contrib/sais-lite-lcp/sais.c -fPIC -DPIC -o contrib/sais-lite-lcp/.libs/sais.o -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_16.lo `test -f 'src/sg_stats_diag_avx2_256_16.c' || echo './'`src/sg_stats_diag_avx2_256_16.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_8.c:13: + from src/nw_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:412:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5975,12 +5976,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here - 407 | __m256i vHtM; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:337:17: note: 'vHtM' was declared here + 337 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:413:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -5988,26 +5989,26 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here - 408 | __m256i vHtS; +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:338:17: note: 'vHtS' was declared here + 338 | __m256i vHtS; | ^~~~ -In function '_mm256_adds_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': -src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here - 409 | __m256i vHtL; +In function '_mm256_add_epi32', + inlined from 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32' at src/nw_stats_scan_avx2_256_32.c:414:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); + | ^~~~~~~~~~~ +src/nw_stats_scan_avx2_256_32.c: In function 'parasail_nw_stats_rowcol_scan_profile_avx2_256_32': +src/nw_stats_scan_avx2_256_32.c:339:17: note: 'vHtL' was declared here + 339 | __m256i vHtL; | ^~~~ -libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_8.o -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec.la src/libparasail_novec_la-nw.lo src/libparasail_novec_la-sg.lo src/libparasail_novec_la-sw.lo src/libparasail_novec_la-nw_scan.lo src/libparasail_novec_la-sg_scan.lo src/libparasail_novec_la-sw_scan.lo src/libparasail_novec_la-nw_banded.lo src/libparasail_novec_la-nw_stats.lo src/libparasail_novec_la-sg_stats.lo src/libparasail_novec_la-sw_stats.lo src/libparasail_novec_la-nw_stats_scan.lo src/libparasail_novec_la-sg_stats_scan.lo src/libparasail_novec_la-sw_stats_scan.lo src/libparasail_novec_la-nw_trace.lo src/libparasail_novec_la-sg_trace.lo src/libparasail_novec_la-sw_trace.lo src/libparasail_novec_la-nw_trace_scan.lo src/libparasail_novec_la-sg_trace_scan.lo src/libparasail_novec_la-sw_trace_scan.lo -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec_table.la src/libparasail_novec_table_la-nw.lo src/libparasail_novec_table_la-sg.lo src/libparasail_novec_table_la-sw.lo src/libparasail_novec_table_la-nw_scan.lo src/libparasail_novec_table_la-sg_scan.lo src/libparasail_novec_table_la-sw_scan.lo src/libparasail_novec_table_la-nw_banded.lo src/libparasail_novec_table_la-nw_stats.lo src/libparasail_novec_table_la-sg_stats.lo src/libparasail_novec_table_la-sw_stats.lo src/libparasail_novec_table_la-nw_stats_scan.lo src/libparasail_novec_table_la-sg_stats_scan.lo src/libparasail_novec_table_la-sw_stats_scan.lo +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_16.lo `test -f 'src/sw_stats_diag_avx2_256_16.c' || echo './'`src/sw_stats_diag_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_8.lo `test -f 'src/nw_stats_diag_avx2_256_8.c' || echo './'`src/nw_stats_diag_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_16.o In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_32.c:14: + from src/sg_stats_scan_avx2_256_32.c:13: In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:406:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:434:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -6015,12 +6016,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:331:17: note: 'vHtM' was declared here - 331 | __m256i vHtM; +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:359:17: note: 'vHtM' was declared here + 359 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:407:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:435:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -6028,59 +6029,26 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:332:17: note: 'vHtS' was declared here - 332 | __m256i vHtS; +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:360:17: note: 'vHtS' was declared here + 360 | __m256i vHtS; | ^~~~ In function '_mm256_add_epi32', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32' at src/sw_stats_scan_avx2_256_32.c:408:19: + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:436:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); | ^~~~~~~~~~~ -src/sw_stats_scan_avx2_256_32.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_32': -src/sw_stats_scan_avx2_256_32.c:333:17: note: 'vHtL' was declared here - 333 | __m256i vHtL; - | ^~~~ -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:401:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 401 | __m256i vHtM; - | ^~~~ -src/sg_stats_scan_avx2_256_64.c:402:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 402 | __m256i vHtS; - | ^~~~ -src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64': -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_64.c:13: -In function '_mm256_add_epi64', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64' at src/sg_stats_scan_avx2_256_64.c:478:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_avx2_256_64.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_64': -src/sg_stats_scan_avx2_256_64.c:403:17: note: 'vHtL' was declared here - 403 | __m256i vHtL; - | ^~~~ -src/sw_stats_scan_avx2_256_64.c:359:17: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] - 359 | __m256i vHtM; - | ^~~~ -src/sw_stats_scan_avx2_256_64.c:360:17: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] - 360 | __m256i vHtS; - | ^~~~ -In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sw_stats_scan_avx2_256_64.c:14: -In function '_mm256_add_epi64', - inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64' at src/sw_stats_scan_avx2_256_64.c:436:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:128:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 128 | return (__m256i) ((__v4du)__A + (__v4du)__B); - | ^~~~~~~~~~~ -src/sw_stats_scan_avx2_256_64.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_64': -src/sw_stats_scan_avx2_256_64.c:361:17: note: 'vHtL' was declared here +src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': +src/sg_stats_scan_avx2_256_32.c:361:17: note: 'vHtL' was declared here 361 | __m256i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_diag_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_8.lo `test -f 'src/sg_stats_diag_avx2_256_8.c' || echo './'`src/sg_stats_diag_avx2_256_8.c In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, - from src/sg_stats_scan_avx2_256_32.c:13: + from src/sw_stats_scan_avx2_256_16.c:14: In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:434:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:423:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -6088,12 +6056,12 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:359:17: note: 'vHtM' was declared here - 359 | __m256i vHtM; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:348:17: note: 'vHtM' was declared here + 348 | __m256i vHtM; | ^~~~ In function '_mm256_blendv_epi8', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:435:19: + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:424:19: /usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -6101,19 +6069,21 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:360:17: note: 'vHtS' was declared here - 360 | __m256i vHtS; +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:349:17: note: 'vHtS' was declared here + 349 | __m256i vHtS; | ^~~~ -In function '_mm256_add_epi32', - inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32' at src/sg_stats_scan_avx2_256_32.c:436:19: -/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:121:21: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] - 121 | return (__m256i) ((__v8su)__A + (__v8su)__B); - | ^~~~~~~~~~~ -src/sg_stats_scan_avx2_256_32.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_32': -src/sg_stats_scan_avx2_256_32.c:361:17: note: 'vHtL' was declared here - 361 | __m256i vHtL; +In function '_mm256_adds_epi16', + inlined from 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16' at src/sw_stats_scan_avx2_256_16.c:425:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:142:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 142 | return (__m256i)__builtin_ia32_paddsw256 ((__v16hi)__A, (__v16hi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sw_stats_scan_avx2_256_16.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_16': +src/sw_stats_scan_avx2_256_16.c:350:17: note: 'vHtL' was declared here + 350 | __m256i vHtL; | ^~~~ +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_8.lo `test -f 'src/sw_stats_diag_avx2_256_8.c' || echo './'`src/sw_stats_diag_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_diag_avx2_256_8.o In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sg_stats_scan_avx2_256_16.c:13: In function '_mm256_blendv_epi8', @@ -6151,6 +6121,46 @@ src/sg_stats_scan_avx2_256_16.c:377:17: note: 'vHtL' was declared here 377 | __m256i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_diag_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_diag_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_64.lo `test -f 'src/nw_stats_striped_avx2_256_64.c' || echo './'`src/nw_stats_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_64.lo `test -f 'src/sg_stats_striped_avx2_256_64.c' || echo './'`src/sg_stats_striped_avx2_256_64.c +In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, + from src/sg_stats_scan_avx2_256_8.c:13: +In function '_mm256_blendv_epi8', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:482:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtM' may be used uninitialized [-Wmaybe-uninitialized] + 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 210 | (__v32qi)__Y, + | ~~~~~~~~~~~~~ + 211 | (__v32qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:407:17: note: 'vHtM' was declared here + 407 | __m256i vHtM; + | ^~~~ +In function '_mm256_blendv_epi8', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:483:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:209:20: warning: 'vHtS' may be used uninitialized [-Wmaybe-uninitialized] + 209 | return (__m256i) __builtin_ia32_pblendvb256 ((__v32qi)__X, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 210 | (__v32qi)__Y, + | ~~~~~~~~~~~~~ + 211 | (__v32qi)__M); + | ~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:408:17: note: 'vHtS' was declared here + 408 | __m256i vHtS; + | ^~~~ +In function '_mm256_adds_epi8', + inlined from 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8' at src/sg_stats_scan_avx2_256_8.c:484:19: +/usr/lib/gcc/x86_64-linux-gnu/14/include/avx2intrin.h:135:19: warning: 'vHtL' may be used uninitialized [-Wmaybe-uninitialized] + 135 | return (__m256i)__builtin_ia32_paddsb256 ((__v32qi)__A, (__v32qi)__B); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +src/sg_stats_scan_avx2_256_8.c: In function 'parasail_sg_flags_stats_rowcol_scan_profile_avx2_256_8': +src/sg_stats_scan_avx2_256_8.c:409:17: note: 'vHtL' was declared here + 409 | __m256i vHtL; + | ^~~~ In file included from /usr/lib/gcc/x86_64-linux-gnu/14/include/immintrin.h:53, from src/sw_stats_scan_avx2_256_8.c:14: In function '_mm256_blendv_epi8', @@ -6162,6 +6172,7 @@ | ~~~~~~~~~~~~~ 211 | (__v32qi)__M); | ~~~~~~~~~~~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_64.o src/sw_stats_scan_avx2_256_8.c: In function 'parasail_sw_stats_rowcol_scan_profile_avx2_256_8': src/sw_stats_scan_avx2_256_8.c:381:17: note: 'vHtM' was declared here 381 | __m256i vHtM; @@ -6188,77 +6199,102 @@ src/sw_stats_scan_avx2_256_8.c:383:17: note: 'vHtL' was declared here 383 | __m256i vHtL; | ^~~~ +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_64.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_64.lo `test -f 'src/sw_stats_striped_avx2_256_64.c' || echo './'`src/sw_stats_striped_avx2_256_64.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_32.lo `test -f 'src/nw_stats_striped_avx2_256_32.c' || echo './'`src/nw_stats_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_64.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_64.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_32.lo `test -f 'src/sg_stats_striped_avx2_256_32.c' || echo './'`src/sg_stats_striped_avx2_256_32.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_32.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_32.lo `test -f 'src/sw_stats_striped_avx2_256_32.c' || echo './'`src/sw_stats_striped_avx2_256_32.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_16.lo `test -f 'src/nw_stats_striped_avx2_256_16.c' || echo './'`src/nw_stats_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_32.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_32.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_16.lo `test -f 'src/sg_stats_striped_avx2_256_16.c' || echo './'`src/sg_stats_striped_avx2_256_16.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_16.lo `test -f 'src/sw_stats_striped_avx2_256_16.c' || echo './'`src/sw_stats_striped_avx2_256_16.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_16.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_8.lo `test -f 'src/nw_stats_striped_avx2_256_8.c' || echo './'`src/nw_stats_striped_avx2_256_8.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_16.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_16.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/nw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-nw_stats_striped_avx2_256_8.o +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_8.lo `test -f 'src/sg_stats_striped_avx2_256_8.c' || echo './'`src/sg_stats_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o src/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_8.lo `test -f 'src/sw_stats_striped_avx2_256_8.c' || echo './'`src/sw_stats_striped_avx2_256_8.c +/bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o contrib/sais-lite-lcp/sais.lo contrib/sais-lite-lcp/sais.c +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sw_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -DPARASAIL_ROWCOL=1 -Wdate-time -D_FORTIFY_SOURCE=2 -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c src/sg_stats_striped_avx2_256_8.c -fPIC -DPIC -o src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_8.o +libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c contrib/sais-lite-lcp/sais.c -fPIC -DPIC -o contrib/sais-lite-lcp/.libs/sais.o +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec.la src/libparasail_novec_la-nw.lo src/libparasail_novec_la-sg.lo src/libparasail_novec_la-sw.lo src/libparasail_novec_la-nw_scan.lo src/libparasail_novec_la-sg_scan.lo src/libparasail_novec_la-sw_scan.lo src/libparasail_novec_la-nw_banded.lo src/libparasail_novec_la-nw_stats.lo src/libparasail_novec_la-sg_stats.lo src/libparasail_novec_la-sw_stats.lo src/libparasail_novec_la-nw_stats_scan.lo src/libparasail_novec_la-sg_stats_scan.lo src/libparasail_novec_la-sw_stats_scan.lo src/libparasail_novec_la-nw_trace.lo src/libparasail_novec_la-sg_trace.lo src/libparasail_novec_la-sw_trace.lo src/libparasail_novec_la-nw_trace_scan.lo src/libparasail_novec_la-sg_trace_scan.lo src/libparasail_novec_la-sw_trace_scan.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec_table.la src/libparasail_novec_table_la-nw.lo src/libparasail_novec_table_la-sg.lo src/libparasail_novec_table_la-sw.lo src/libparasail_novec_table_la-nw_scan.lo src/libparasail_novec_table_la-sg_scan.lo src/libparasail_novec_table_la-sw_scan.lo src/libparasail_novec_table_la-nw_banded.lo src/libparasail_novec_table_la-nw_stats.lo src/libparasail_novec_table_la-sg_stats.lo src/libparasail_novec_table_la-sw_stats.lo src/libparasail_novec_table_la-nw_stats_scan.lo src/libparasail_novec_table_la-sg_stats_scan.lo src/libparasail_novec_table_la-sw_stats_scan.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec_rowcol.la src/libparasail_novec_rowcol_la-nw.lo src/libparasail_novec_rowcol_la-sg.lo src/libparasail_novec_rowcol_la-sw.lo src/libparasail_novec_rowcol_la-nw_scan.lo src/libparasail_novec_rowcol_la-sg_scan.lo src/libparasail_novec_rowcol_la-sw_scan.lo src/libparasail_novec_rowcol_la-nw_banded.lo src/libparasail_novec_rowcol_la-nw_stats.lo src/libparasail_novec_rowcol_la-sg_stats.lo src/libparasail_novec_rowcol_la-sw_stats.lo src/libparasail_novec_rowcol_la-nw_stats_scan.lo src/libparasail_novec_rowcol_la-sg_stats_scan.lo src/libparasail_novec_rowcol_la-sw_stats_scan.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_sse_memory.la src/libparasail_sse_memory_la-memory_sse.lo libtool: link: ar cr .libs/libparasail_novec_table.a src/.libs/libparasail_novec_table_la-nw.o src/.libs/libparasail_novec_table_la-sg.o src/.libs/libparasail_novec_table_la-sw.o src/.libs/libparasail_novec_table_la-nw_scan.o src/.libs/libparasail_novec_table_la-sg_scan.o src/.libs/libparasail_novec_table_la-sw_scan.o src/.libs/libparasail_novec_table_la-nw_banded.o src/.libs/libparasail_novec_table_la-nw_stats.o src/.libs/libparasail_novec_table_la-sg_stats.o src/.libs/libparasail_novec_table_la-sw_stats.o src/.libs/libparasail_novec_table_la-nw_stats_scan.o src/.libs/libparasail_novec_table_la-sg_stats_scan.o src/.libs/libparasail_novec_table_la-sw_stats_scan.o +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 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ranlib .libs/libparasail_novec_table.a libtool: link: ( cd ".libs" && rm -f "libparasail_novec_table.la" && ln -s "../libparasail_novec_table.la" "libparasail_novec_table.la" ) -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_novec_rowcol.la src/libparasail_novec_rowcol_la-nw.lo src/libparasail_novec_rowcol_la-sg.lo src/libparasail_novec_rowcol_la-sw.lo src/libparasail_novec_rowcol_la-nw_scan.lo src/libparasail_novec_rowcol_la-sg_scan.lo src/libparasail_novec_rowcol_la-sw_scan.lo src/libparasail_novec_rowcol_la-nw_banded.lo src/libparasail_novec_rowcol_la-nw_stats.lo src/libparasail_novec_rowcol_la-sg_stats.lo src/libparasail_novec_rowcol_la-sw_stats.lo src/libparasail_novec_rowcol_la-nw_stats_scan.lo 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src/.libs/libparasail_novec_la-sg_stats_scan.o src/.libs/libparasail_novec_la-sw_stats_scan.o src/.libs/libparasail_novec_la-nw_trace.o src/.libs/libparasail_novec_la-sg_trace.o src/.libs/libparasail_novec_la-sw_trace.o src/.libs/libparasail_novec_la-nw_trace_scan.o src/.libs/libparasail_novec_la-sg_trace_scan.o src/.libs/libparasail_novec_la-sw_trace_scan.o -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_sse2.la src/libparasail_sse2_la-nw_scan_sse2_128_64.lo src/libparasail_sse2_la-sg_scan_sse2_128_64.lo src/libparasail_sse2_la-sw_scan_sse2_128_64.lo src/libparasail_sse2_la-nw_scan_sse2_128_32.lo src/libparasail_sse2_la-sg_scan_sse2_128_32.lo src/libparasail_sse2_la-sw_scan_sse2_128_32.lo 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src/libparasail_sse2_la-sg_trace_scan_sse2_128_8.lo src/libparasail_sse2_la-sw_trace_scan_sse2_128_8.lo src/libparasail_sse2_la-nw_trace_diag_sse2_128_64.lo src/libparasail_sse2_la-sg_trace_diag_sse2_128_64.lo src/libparasail_sse2_la-sw_trace_diag_sse2_128_64.lo src/libparasail_sse2_la-nw_trace_diag_sse2_128_32.lo src/libparasail_sse2_la-sg_trace_diag_sse2_128_32.lo src/libparasail_sse2_la-sw_trace_diag_sse2_128_32.lo src/libparasail_sse2_la-nw_trace_diag_sse2_128_16.lo src/libparasail_sse2_la-sg_trace_diag_sse2_128_16.lo src/libparasail_sse2_la-sw_trace_diag_sse2_128_16.lo src/libparasail_sse2_la-nw_trace_diag_sse2_128_8.lo src/libparasail_sse2_la-sg_trace_diag_sse2_128_8.lo src/libparasail_sse2_la-sw_trace_diag_sse2_128_8.lo src/libparasail_sse2_la-nw_trace_striped_sse2_128_64.lo src/libparasail_sse2_la-sg_trace_striped_sse2_128_64.lo src/libparasail_sse2_la-sw_trace_striped_sse2_128_64.lo src/libparasail_sse2_la-nw_trace_striped_sse2_128_32.lo 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-Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2_memory.la src/libparasail_avx2_memory_la-memory_avx2.lo -/bin/bash ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2.la src/libparasail_avx2_la-nw_scan_avx2_256_64.lo src/libparasail_avx2_la-sg_scan_avx2_256_64.lo src/libparasail_avx2_la-sw_scan_avx2_256_64.lo src/libparasail_avx2_la-nw_scan_avx2_256_32.lo src/libparasail_avx2_la-sg_scan_avx2_256_32.lo src/libparasail_avx2_la-sw_scan_avx2_256_32.lo src/libparasail_avx2_la-nw_scan_avx2_256_16.lo src/libparasail_avx2_la-sg_scan_avx2_256_16.lo src/libparasail_avx2_la-sw_scan_avx2_256_16.lo src/libparasail_avx2_la-nw_scan_avx2_256_8.lo src/libparasail_avx2_la-sg_scan_avx2_256_8.lo 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src/libparasail_sse41_table_la-nw_stats_diag_sse41_128_8.lo src/libparasail_sse41_table_la-sg_stats_diag_sse41_128_8.lo src/libparasail_sse41_table_la-sw_stats_diag_sse41_128_8.lo src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_64.lo src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_64.lo src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_64.lo src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_32.lo src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_32.lo src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_32.lo src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_16.lo src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_16.lo src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_16.lo src/libparasail_sse41_table_la-nw_stats_striped_sse41_128_8.lo src/libparasail_sse41_table_la-sg_stats_striped_sse41_128_8.lo src/libparasail_sse41_table_la-sw_stats_striped_sse41_128_8.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -msse4.1 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_sse41_rowcol.la src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_64.lo src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_64.lo src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_64.lo src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_32.lo src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_32.lo src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_32.lo src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_16.lo src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_16.lo src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_16.lo src/libparasail_sse41_rowcol_la-nw_scan_sse41_128_8.lo src/libparasail_sse41_rowcol_la-sg_scan_sse41_128_8.lo src/libparasail_sse41_rowcol_la-sw_scan_sse41_128_8.lo 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src/.libs/libparasail_novec_rowcol_la-sw.o src/.libs/libparasail_novec_rowcol_la-nw_scan.o src/.libs/libparasail_novec_rowcol_la-sg_scan.o src/.libs/libparasail_novec_rowcol_la-sw_scan.o src/.libs/libparasail_novec_rowcol_la-nw_banded.o src/.libs/libparasail_novec_rowcol_la-nw_stats.o src/.libs/libparasail_novec_rowcol_la-sg_stats.o src/.libs/libparasail_novec_rowcol_la-sw_stats.o src/.libs/libparasail_novec_rowcol_la-nw_stats_scan.o src/.libs/libparasail_novec_rowcol_la-sg_stats_scan.o src/.libs/libparasail_novec_rowcol_la-sw_stats_scan.o -/bin/bash ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2_table.la src/libparasail_avx2_table_la-nw_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_64.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_32.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_16.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_8.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_64.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_32.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_16.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_16.lo 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src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_64.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.lo src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_32.lo src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_16.lo src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_16.lo src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_16.lo src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_8.lo src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_8.lo src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_8.lo src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_64.lo src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_64.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_64.lo src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_32.lo src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_32.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_32.lo src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_16.lo src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.lo src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.lo -libtool: link: ar cr .libs/libparasail_avx2_memory.a src/.libs/libparasail_avx2_memory_la-memory_avx2.o libtool: link: ranlib .libs/libparasail_novec_rowcol.a +libtool: link: ( cd ".libs" && rm -f "libparasail_novec_rowcol.la" && ln -s "../libparasail_novec_rowcol.la" "libparasail_novec_rowcol.la" ) +/bin/sh ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2_memory.la src/libparasail_avx2_memory_la-memory_avx2.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2.la src/libparasail_avx2_la-nw_scan_avx2_256_64.lo src/libparasail_avx2_la-sg_scan_avx2_256_64.lo src/libparasail_avx2_la-sw_scan_avx2_256_64.lo src/libparasail_avx2_la-nw_scan_avx2_256_32.lo src/libparasail_avx2_la-sg_scan_avx2_256_32.lo src/libparasail_avx2_la-sw_scan_avx2_256_32.lo src/libparasail_avx2_la-nw_scan_avx2_256_16.lo src/libparasail_avx2_la-sg_scan_avx2_256_16.lo src/libparasail_avx2_la-sw_scan_avx2_256_16.lo src/libparasail_avx2_la-nw_scan_avx2_256_8.lo src/libparasail_avx2_la-sg_scan_avx2_256_8.lo src/libparasail_avx2_la-sw_scan_avx2_256_8.lo src/libparasail_avx2_la-nw_diag_avx2_256_64.lo src/libparasail_avx2_la-sg_diag_avx2_256_64.lo src/libparasail_avx2_la-sw_diag_avx2_256_64.lo src/libparasail_avx2_la-nw_diag_avx2_256_32.lo src/libparasail_avx2_la-sg_diag_avx2_256_32.lo src/libparasail_avx2_la-sw_diag_avx2_256_32.lo src/libparasail_avx2_la-nw_diag_avx2_256_16.lo src/libparasail_avx2_la-sg_diag_avx2_256_16.lo src/libparasail_avx2_la-sw_diag_avx2_256_16.lo src/libparasail_avx2_la-nw_diag_avx2_256_8.lo src/libparasail_avx2_la-sg_diag_avx2_256_8.lo src/libparasail_avx2_la-sw_diag_avx2_256_8.lo src/libparasail_avx2_la-nw_striped_avx2_256_64.lo src/libparasail_avx2_la-sg_striped_avx2_256_64.lo src/libparasail_avx2_la-sw_striped_avx2_256_64.lo src/libparasail_avx2_la-nw_striped_avx2_256_32.lo src/libparasail_avx2_la-sg_striped_avx2_256_32.lo src/libparasail_avx2_la-sw_striped_avx2_256_32.lo src/libparasail_avx2_la-nw_striped_avx2_256_16.lo src/libparasail_avx2_la-sg_striped_avx2_256_16.lo src/libparasail_avx2_la-sw_striped_avx2_256_16.lo src/libparasail_avx2_la-nw_striped_avx2_256_8.lo src/libparasail_avx2_la-sg_striped_avx2_256_8.lo src/libparasail_avx2_la-sw_striped_avx2_256_8.lo src/libparasail_avx2_la-nw_stats_scan_avx2_256_64.lo src/libparasail_avx2_la-sg_stats_scan_avx2_256_64.lo src/libparasail_avx2_la-sw_stats_scan_avx2_256_64.lo src/libparasail_avx2_la-nw_stats_scan_avx2_256_32.lo src/libparasail_avx2_la-sg_stats_scan_avx2_256_32.lo src/libparasail_avx2_la-sw_stats_scan_avx2_256_32.lo src/libparasail_avx2_la-nw_stats_scan_avx2_256_16.lo src/libparasail_avx2_la-sg_stats_scan_avx2_256_16.lo src/libparasail_avx2_la-sw_stats_scan_avx2_256_16.lo src/libparasail_avx2_la-nw_stats_scan_avx2_256_8.lo src/libparasail_avx2_la-sg_stats_scan_avx2_256_8.lo src/libparasail_avx2_la-sw_stats_scan_avx2_256_8.lo src/libparasail_avx2_la-nw_stats_diag_avx2_256_64.lo src/libparasail_avx2_la-sg_stats_diag_avx2_256_64.lo src/libparasail_avx2_la-sw_stats_diag_avx2_256_64.lo src/libparasail_avx2_la-nw_stats_diag_avx2_256_32.lo src/libparasail_avx2_la-sg_stats_diag_avx2_256_32.lo src/libparasail_avx2_la-sw_stats_diag_avx2_256_32.lo src/libparasail_avx2_la-nw_stats_diag_avx2_256_16.lo src/libparasail_avx2_la-sg_stats_diag_avx2_256_16.lo src/libparasail_avx2_la-sw_stats_diag_avx2_256_16.lo src/libparasail_avx2_la-nw_stats_diag_avx2_256_8.lo src/libparasail_avx2_la-sg_stats_diag_avx2_256_8.lo src/libparasail_avx2_la-sw_stats_diag_avx2_256_8.lo src/libparasail_avx2_la-nw_stats_striped_avx2_256_64.lo src/libparasail_avx2_la-sg_stats_striped_avx2_256_64.lo src/libparasail_avx2_la-sw_stats_striped_avx2_256_64.lo src/libparasail_avx2_la-nw_stats_striped_avx2_256_32.lo src/libparasail_avx2_la-sg_stats_striped_avx2_256_32.lo src/libparasail_avx2_la-sw_stats_striped_avx2_256_32.lo src/libparasail_avx2_la-nw_stats_striped_avx2_256_16.lo src/libparasail_avx2_la-sg_stats_striped_avx2_256_16.lo src/libparasail_avx2_la-sw_stats_striped_avx2_256_16.lo src/libparasail_avx2_la-nw_stats_striped_avx2_256_8.lo src/libparasail_avx2_la-sg_stats_striped_avx2_256_8.lo src/libparasail_avx2_la-sw_stats_striped_avx2_256_8.lo src/libparasail_avx2_la-nw_trace_scan_avx2_256_64.lo src/libparasail_avx2_la-sg_trace_scan_avx2_256_64.lo src/libparasail_avx2_la-sw_trace_scan_avx2_256_64.lo src/libparasail_avx2_la-nw_trace_scan_avx2_256_32.lo src/libparasail_avx2_la-sg_trace_scan_avx2_256_32.lo src/libparasail_avx2_la-sw_trace_scan_avx2_256_32.lo src/libparasail_avx2_la-nw_trace_scan_avx2_256_16.lo src/libparasail_avx2_la-sg_trace_scan_avx2_256_16.lo src/libparasail_avx2_la-sw_trace_scan_avx2_256_16.lo src/libparasail_avx2_la-nw_trace_scan_avx2_256_8.lo src/libparasail_avx2_la-sg_trace_scan_avx2_256_8.lo src/libparasail_avx2_la-sw_trace_scan_avx2_256_8.lo src/libparasail_avx2_la-nw_trace_diag_avx2_256_64.lo src/libparasail_avx2_la-sg_trace_diag_avx2_256_64.lo src/libparasail_avx2_la-sw_trace_diag_avx2_256_64.lo src/libparasail_avx2_la-nw_trace_diag_avx2_256_32.lo src/libparasail_avx2_la-sg_trace_diag_avx2_256_32.lo src/libparasail_avx2_la-sw_trace_diag_avx2_256_32.lo src/libparasail_avx2_la-nw_trace_diag_avx2_256_16.lo src/libparasail_avx2_la-sg_trace_diag_avx2_256_16.lo src/libparasail_avx2_la-sw_trace_diag_avx2_256_16.lo src/libparasail_avx2_la-nw_trace_diag_avx2_256_8.lo src/libparasail_avx2_la-sg_trace_diag_avx2_256_8.lo src/libparasail_avx2_la-sw_trace_diag_avx2_256_8.lo src/libparasail_avx2_la-nw_trace_striped_avx2_256_64.lo src/libparasail_avx2_la-sg_trace_striped_avx2_256_64.lo src/libparasail_avx2_la-sw_trace_striped_avx2_256_64.lo src/libparasail_avx2_la-nw_trace_striped_avx2_256_32.lo src/libparasail_avx2_la-sg_trace_striped_avx2_256_32.lo src/libparasail_avx2_la-sw_trace_striped_avx2_256_32.lo src/libparasail_avx2_la-nw_trace_striped_avx2_256_16.lo src/libparasail_avx2_la-sg_trace_striped_avx2_256_16.lo src/libparasail_avx2_la-sw_trace_striped_avx2_256_16.lo src/libparasail_avx2_la-nw_trace_striped_avx2_256_8.lo src/libparasail_avx2_la-sg_trace_striped_avx2_256_8.lo src/libparasail_avx2_la-sw_trace_striped_avx2_256_8.lo +/bin/sh ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2_table.la src/libparasail_avx2_table_la-nw_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_64.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_32.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_16.lo src/libparasail_avx2_table_la-nw_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sg_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sw_scan_avx2_256_8.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_64.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_32.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_32.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_16.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_16.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_16.lo src/libparasail_avx2_table_la-nw_diag_avx2_256_8.lo src/libparasail_avx2_table_la-sg_diag_avx2_256_8.lo src/libparasail_avx2_table_la-sw_diag_avx2_256_8.lo src/libparasail_avx2_table_la-nw_striped_avx2_256_64.lo src/libparasail_avx2_table_la-sg_striped_avx2_256_64.lo src/libparasail_avx2_table_la-sw_striped_avx2_256_64.lo src/libparasail_avx2_table_la-nw_striped_avx2_256_32.lo src/libparasail_avx2_table_la-sg_striped_avx2_256_32.lo src/libparasail_avx2_table_la-sw_striped_avx2_256_32.lo src/libparasail_avx2_table_la-nw_striped_avx2_256_16.lo src/libparasail_avx2_table_la-sg_striped_avx2_256_16.lo src/libparasail_avx2_table_la-sw_striped_avx2_256_16.lo src/libparasail_avx2_table_la-nw_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sg_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sw_striped_avx2_256_8.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_64.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_64.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_32.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_16.lo src/libparasail_avx2_table_la-nw_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sg_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-sw_stats_scan_avx2_256_8.lo src/libparasail_avx2_table_la-nw_stats_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sg_stats_diag_avx2_256_64.lo src/libparasail_avx2_table_la-sw_stats_diag_avx2_256_64.lo 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src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_16.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_16.lo src/libparasail_avx2_table_la-nw_stats_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sg_stats_striped_avx2_256_8.lo src/libparasail_avx2_table_la-sw_stats_striped_avx2_256_8.lo +libtool: link: ar cr .libs/libparasail_avx2_memory.a src/.libs/libparasail_avx2_memory_la-memory_avx2.o libtool: link: ranlib .libs/libparasail_avx2_memory.a libtool: link: ( cd ".libs" && rm -f "libparasail_avx2_memory.la" && ln -s "../libparasail_avx2_memory.la" "libparasail_avx2_memory.la" ) -libtool: link: ( cd ".libs" && rm -f "libparasail_novec_rowcol.la" && ln -s "../libparasail_novec_rowcol.la" "libparasail_novec_rowcol.la" ) +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection 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) -libtool: link: ( cd ".libs" && rm -f "libparasail_sse2_table.la" && ln -s "../libparasail_sse2_table.la" "libparasail_sse2_table.la" ) +/bin/sh ./libtool --tag=CC --mode=link gcc -mavx2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o libparasail_avx2_rowcol.la src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_64.lo src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_64.lo src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_64.lo src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_32.lo src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_32.lo src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_32.lo src/libparasail_avx2_rowcol_la-nw_scan_avx2_256_16.lo src/libparasail_avx2_rowcol_la-sg_scan_avx2_256_16.lo src/libparasail_avx2_rowcol_la-sw_scan_avx2_256_16.lo 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link: ( cd ".libs" && rm -f "libparasail_avx2_table.la" && ln -s "../libparasail_avx2_table.la" "libparasail_avx2_table.la" ) +libtool: link: ranlib .libs/libparasail_sse41.a +libtool: link: ar cr .libs/libparasail_avx2.a src/.libs/libparasail_avx2_la-nw_scan_avx2_256_64.o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_64.o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_64.o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_32.o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_32.o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_32.o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_16.o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_16.o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_16.o src/.libs/libparasail_avx2_la-nw_scan_avx2_256_8.o src/.libs/libparasail_avx2_la-sg_scan_avx2_256_8.o src/.libs/libparasail_avx2_la-sw_scan_avx2_256_8.o src/.libs/libparasail_avx2_la-nw_diag_avx2_256_64.o src/.libs/libparasail_avx2_la-sg_diag_avx2_256_64.o src/.libs/libparasail_avx2_la-sw_diag_avx2_256_64.o 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src/.libs/libparasail_avx2_rowcol_la-sg_stats_striped_avx2_256_8.o src/.libs/libparasail_avx2_rowcol_la-sw_stats_striped_avx2_256_8.o libtool: link: ranlib .libs/libparasail_avx2_rowcol.a libtool: link: ( cd ".libs" && rm -f "libparasail_avx2_rowcol.la" && ln -s "../libparasail_avx2_rowcol.la" "libparasail_avx2_rowcol.la" ) -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -version-info 9:2:1 -Wl,-z,relro -Wl,-z,now -o libparasail.la -rpath /usr/lib/x86_64-linux-gnu src/libparasail_la-cigar.lo src/libparasail_la-cpuid.lo src/libparasail_la-function_lookup.lo src/libparasail_la-io.lo src/libparasail_la-isastubs.lo src/libparasail_la-matrix_lookup.lo src/libparasail_la-memory.lo src/libparasail_la-parser.lo src/libparasail_la-pssw.lo src/libparasail_la-time.lo 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--tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -version-info 9:2:1 -Wl,-z,relro -Wl,-z,now -o libparasail.la -rpath /usr/lib/x86_64-linux-gnu src/libparasail_la-cigar.lo src/libparasail_la-cpuid.lo src/libparasail_la-function_lookup.lo src/libparasail_la-io.lo src/libparasail_la-isastubs.lo src/libparasail_la-matrix_lookup.lo src/libparasail_la-memory.lo src/libparasail_la-parser.lo src/libparasail_la-pssw.lo src/libparasail_la-time.lo src/libparasail_la-nw_dispatch.lo src/libparasail_la-sg_dispatch.lo src/libparasail_la-sw_dispatch.lo src/libparasail_la-sg_qb_dispatch.lo src/libparasail_la-sg_qe_dispatch.lo src/libparasail_la-sg_qx_dispatch.lo src/libparasail_la-sg_db_dispatch.lo src/libparasail_la-sg_de_dispatch.lo src/libparasail_la-sg_dx_dispatch.lo 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src/.libs/libparasail_la-pssw.o src/.libs/libparasail_la-time.o src/.libs/libparasail_la-nw_dispatch.o src/.libs/libparasail_la-sg_dispatch.o src/.libs/libparasail_la-sw_dispatch.o src/.libs/libparasail_la-sg_qb_dispatch.o src/.libs/libparasail_la-sg_qe_dispatch.o src/.libs/libparasail_la-sg_qx_dispatch.o src/.libs/libparasail_la-sg_db_dispatch.o src/.libs/libparasail_la-sg_de_dispatch.o src/.libs/libparasail_la-sg_dx_dispatch.o src/.libs/libparasail_la-sg_qb_de_dispatch.o src/.libs/libparasail_la-sg_qe_db_dispatch.o src/.libs/libparasail_la-sg_qb_db_dispatch.o src/.libs/libparasail_la-sg_qe_de_dispatch.o src/.libs/libparasail_la-dispatch_profile.o src/.libs/libparasail_la-satcheck.o src/.libs/libparasail_la-striped_unwind.o src/.libs/libparasail_la-traceback.o -Wl,--whole-archive ./.libs/libparasail_novec.a ./.libs/libparasail_novec_table.a ./.libs/libparasail_novec_rowcol.a ./.libs/libparasail_sse_memory.a ./.libs/libparasail_sse2.a ./.libs/libparasail_sse2_table.a ./.libs/libparasail_sse2_rowcol.a ./.libs/libparasail_sse41.a ./.libs/libparasail_sse41_table.a ./.libs/libparasail_sse41_rowcol.a ./.libs/libparasail_avx2_memory.a ./.libs/libparasail_avx2.a ./.libs/libparasail_avx2_table.a ./.libs/libparasail_avx2_rowcol.a -Wl,--no-whole-archive -lm -lz -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libparasail.so.8 -o .libs/libparasail.so.8.1.2 libtool: link: (cd ".libs" && rm -f "libparasail.so.8" && ln -s "libparasail.so.8.1.2" "libparasail.so.8") libtool: link: (cd ".libs" && rm -f "libparasail.so" && ln -s "libparasail.so.8.1.2" "libparasail.so") libtool: link: ( cd ".libs" && rm -f "libparasail.la" && ln -s "../libparasail.la" "libparasail.la" ) -/bin/bash ./libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o apps/parasail_aligner apps/parasail_aligner-parasail_aligner.o contrib/getMemorySize.o libparasail.la tests/libsais.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o apps/parasail_stats apps/parasail_stats.o libparasail.la +/bin/sh ./libtool --tag=CXX --mode=link g++ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z,relro -Wl,-z,now -o apps/parasail_aligner apps/parasail_aligner-parasail_aligner.o contrib/getMemorySize.o libparasail.la tests/libsais.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o apps/parasail_stats apps/parasail_stats.o libparasail.la libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o apps/.libs/parasail_stats apps/parasail_stats.o ./.libs/libparasail.so -lm -lz libtool: link: g++ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o apps/.libs/parasail_aligner apps/parasail_aligner-parasail_aligner.o contrib/getMemorySize.o ./.libs/libparasail.so -lm -lz tests/.libs/libsais.a -fopenmp make[2]: Leaving directory '/build/reproducible-path/parasail-2.6.2+dfsg' make[1]: Leaving directory '/build/reproducible-path/parasail-2.6.2+dfsg' dh_auto_test - make -j42 test "TESTSUITEFLAGS=-j42 --verbose" VERBOSE=1 + make -j20 test "TESTSUITEFLAGS=-j20 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' make tests/traceback tests/test_align tests/test_basic tests/test_gcups tests/test_io tests/test_isa tests/test_matrix tests/test_pssm tests/test_query tests/test_sw_dispatch tests/test_verify tests/test_verify_tables tests/test_verify_rowcols tests/test_verify_traces tests/test_verify_cigars tests/test_12 tests/test_64 tests/test_p29 tests/test_p59 tests/libsais.la make[2]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' @@ -6282,9 +6318,18 @@ gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o tests/test_64.o tests/test_64.c gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o tests/test_p29.o tests/test_p29.c gcc -DHAVE_CONFIG_H -I. -I./contrib -I./contrib/sais-lite-lcp -I./src -I/usr/include/htslib -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -c -o tests/test_p59.o tests/test_p59.c -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_io tests/test_io.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_gcups tests/test_gcups.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_p29 tests/test_p29.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_io tests/test_io.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_gcups tests/test_gcups.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_basic tests/test_basic.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_query tests/test_query-test_query.o libparasail.la +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_io tests/test_io.o ./.libs/libparasail.so -lm -lz +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_matrix tests/test_matrix.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_12 tests/test_12.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_sw_dispatch tests/test_sw_dispatch.o libparasail.la +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_gcups tests/test_gcups.o ./.libs/libparasail.so -lm -lz +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_p29 tests/test_p29.o libparasail.la +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_basic tests/test_basic.o ./.libs/libparasail.so -lm -lz +libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_query tests/test_query-test_query.o ./.libs/libparasail.so -lm -lz -fopenmp In file included from tests/test_p59.c:33: tests/test_p59.h: In function 'main': tests/test_p59.h:513:1: warning: string length '51025' is greater than the length '4095' ISO C99 compilers are required to support [-Woverlength-strings] @@ -6293,13 +6338,6 @@ tests/test_p59.h:1026:1: warning: string length '51024' is greater than the length '4095' ISO C99 compilers are required to support [-Woverlength-strings] 1026 | "AAAGTGACAGGGAGAATGGAACCA"; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_basic tests/test_basic.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_p59 tests/test_p59.o libparasail.la -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_io tests/test_io.o ./.libs/libparasail.so -lm -lz -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_isa tests/test_isa.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_64 tests/test_64.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_12 tests/test_12.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_sw_dispatch tests/test_sw_dispatch.o libparasail.la tests/test_verify_traces.c: In function 'main': tests/test_verify_traces.c:239:9: warning: variable 'do_neon' set but not used [-Wunused-but-set-variable] 239 | int do_neon = 1; @@ -6307,9 +6345,9 @@ tests/test_verify_traces.c:238:9: warning: variable 'do_altivec' set but not used [-Wunused-but-set-variable] 238 | int do_altivec = 1; | ^~~~~~~~~~ -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_matrix tests/test_matrix.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_pssm tests/test_pssm.o libparasail.la -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_gcups tests/test_gcups.o ./.libs/libparasail.so -lm -lz +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_p59 tests/test_p59.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_pssm tests/test_pssm.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_64 tests/test_64.o libparasail.la tests/test_verify.c: In function 'main': tests/test_verify.c:310:9: warning: variable 'do_neon' set but not used [-Wunused-but-set-variable] 310 | int do_neon = 1; @@ -6317,7 +6355,13 @@ tests/test_verify.c:309:9: warning: variable 'do_altivec' set but not used [-Wunused-but-set-variable] 309 | int do_altivec = 1; | ^~~~~~~~~~ +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_matrix tests/test_matrix.o ./.libs/libparasail.so -lm -lz +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_12 tests/test_12.o ./.libs/libparasail.so -lm -lz +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_isa tests/test_isa.o libparasail.la +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_sw_dispatch tests/test_sw_dispatch.o ./.libs/libparasail.so -lm -lz +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/traceback tests/traceback.o libparasail.la libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_p29 tests/test_p29.o ./.libs/libparasail.so -lm -lz +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_p59 tests/test_p59.o ./.libs/libparasail.so -lm -lz tests/test_verify_tables.c: In function 'main': tests/test_verify_tables.c:328:9: warning: variable 'do_neon' set but not used [-Wunused-but-set-variable] 328 | int do_neon = 1; @@ -6325,6 +6369,7 @@ tests/test_verify_tables.c:327:9: warning: variable 'do_altivec' set but not used [-Wunused-but-set-variable] 327 | int do_altivec = 1; | ^~~~~~~~~~ +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_64 tests/test_64.o ./.libs/libparasail.so -lm -lz tests/test_verify_cigars.c: In function 'main': tests/test_verify_cigars.c:311:9: warning: variable 'do_neon' set but not used [-Wunused-but-set-variable] 311 | int do_neon = 1; @@ -6332,36 +6377,27 @@ tests/test_verify_cigars.c:310:9: warning: variable 'do_altivec' set but not used [-Wunused-but-set-variable] 310 | int do_altivec = 1; | ^~~~~~~~~~ -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_basic tests/test_basic.o ./.libs/libparasail.so -lm -lz -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_p59 tests/test_p59.o ./.libs/libparasail.so -lm -lz -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_64 tests/test_64.o ./.libs/libparasail.so -lm -lz -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_12 tests/test_12.o ./.libs/libparasail.so -lm -lz -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_sw_dispatch tests/test_sw_dispatch.o ./.libs/libparasail.so -lm -lz -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_isa tests/test_isa.o ./.libs/libparasail.so -lm -lz -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_query tests/test_query-test_query.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/traceback tests/traceback.o libparasail.la -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_matrix tests/test_matrix.o ./.libs/libparasail.so -lm -lz libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_pssm tests/test_pssm.o ./.libs/libparasail.so -lm -lz -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_traces tests/test_verify_traces-test_verify_traces.o libparasail.la -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_rowcols tests/test_verify_rowcols-test_verify_rowcols.o libparasail.la -libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_query tests/test_query-test_query.o ./.libs/libparasail.so -lm -lz -fopenmp +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_isa tests/test_isa.o ./.libs/libparasail.so -lm -lz libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/traceback tests/traceback.o ./.libs/libparasail.so -lm -lz -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_cigars tests/test_verify_cigars-test_verify_cigars.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_traces tests/test_verify_traces-test_verify_traces.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify tests/test_verify-test_verify.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_align tests/test_align.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_rowcols tests/test_verify_rowcols-test_verify_rowcols.o libparasail.la +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_cigars tests/test_verify_cigars-test_verify_cigars.o libparasail.la libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify_traces tests/test_verify_traces-test_verify_traces.o ./.libs/libparasail.so -lm -lz -fopenmp +libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify tests/test_verify-test_verify.o ./.libs/libparasail.so -lm -lz -fopenmp +/bin/sh ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_tables tests/test_verify_tables-test_verify_tables.o libparasail.la libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify_rowcols tests/test_verify_rowcols-test_verify_rowcols.o ./.libs/libparasail.so -lm -lz -fopenmp -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify tests/test_verify-test_verify.o libparasail.la +libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_align tests/test_align.o ./.libs/libparasail.so -lm -lz libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify_cigars tests/test_verify_cigars-test_verify_cigars.o ./.libs/libparasail.so -lm -lz -fopenmp -/bin/bash ./libtool --tag=CC --mode=link gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z,relro -Wl,-z,now -o tests/test_verify_tables tests/test_verify_tables-test_verify_tables.o libparasail.la -libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify tests/test_verify-test_verify.o ./.libs/libparasail.so -lm -lz -fopenmp libtool: link: gcc -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -fopenmp -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_verify_tables tests/test_verify_tables-test_verify_tables.o ./.libs/libparasail.so -lm -lz -fopenmp -/bin/bash ./libtool --tag=CC --mode=link gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z,relro -Wl,-z,now -o tests/test_align tests/test_align.o libparasail.la -libtool: link: gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/parasail-2.6.2+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wall -pedantic -Wl,-z -Wl,relro -Wl,-z -Wl,now -o tests/.libs/test_align tests/test_align.o ./.libs/libparasail.so -lm -lz make[2]: Leaving directory '/build/reproducible-path/parasail-2.6.2+dfsg' make check-TESTS make[2]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' make[3]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' -PASS: tests/test_basic PASS: tests/test_isa +PASS: tests/test_basic PASS: tests/test_verify.test ============================================================================ Testsuite summary for Pairwise Sequence Alignment Library 2.6.2 @@ -6384,14 +6420,14 @@ make[1]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' make[2]: Entering directory '/build/reproducible-path/parasail-2.6.2+dfsg' /usr/bin/mkdir -p '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' - /bin/bash ./libtool --mode=install /usr/bin/install -c libparasail.la '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' + /bin/sh ./libtool --mode=install /usr/bin/install -c libparasail.la '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libparasail.so.8.1.2 /build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libparasail.so.8.1.2 libtool: install: (cd /build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libparasail.so.8.1.2 libparasail.so.8 || { rm -f libparasail.so.8 && ln -s libparasail.so.8.1.2 libparasail.so.8; }; }) libtool: install: (cd /build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libparasail.so.8.1.2 libparasail.so || { rm -f libparasail.so && ln -s libparasail.so.8.1.2 libparasail.so; }; }) libtool: install: /usr/bin/install -c .libs/libparasail.lai /build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/lib/x86_64-linux-gnu/libparasail.la libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' /usr/bin/mkdir -p '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/bin' - /bin/bash ./libtool --mode=install /usr/bin/install -c apps/parasail_aligner apps/parasail_stats '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/bin' + /bin/sh ./libtool --mode=install /usr/bin/install -c apps/parasail_aligner apps/parasail_stats '/build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/bin' libtool: warning: 'libparasail.la' has not been installed in '/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c apps/.libs/parasail_aligner /build/reproducible-path/parasail-2.6.2+dfsg/debian/tmp/usr/bin/parasail_aligner libtool: warning: 'libparasail.la' has not been installed in '/usr/lib/x86_64-linux-gnu' @@ -6464,11 +6500,11 @@ dpkg-gencontrol: warning: package libparasail-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'libparasail-dev' in '../libparasail-dev_2.6.2+dfsg-2_amd64.deb'. -dpkg-deb: building package 'libparasail8' in '../libparasail8_2.6.2+dfsg-2_amd64.deb'. +dpkg-deb: building package 'parasail-dbgsym' in '../parasail-dbgsym_2.6.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'libparasail8-dbgsym' in '../libparasail8-dbgsym_2.6.2+dfsg-2_amd64.deb'. +dpkg-deb: building package 'libparasail8' in '../libparasail8_2.6.2+dfsg-2_amd64.deb'. dpkg-deb: building package 'parasail' in '../parasail_2.6.2+dfsg-2_amd64.deb'. -dpkg-deb: building package 'parasail-dbgsym' in '../parasail-dbgsym_2.6.2+dfsg-2_amd64.deb'. +dpkg-deb: building package 'libparasail-dev' in '../libparasail-dev_2.6.2+dfsg-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../parasail_2.6.2+dfsg-2_amd64.buildinfo dpkg-genchanges --build=binary -O../parasail_2.6.2+dfsg-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -6476,12 +6512,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2999135/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3417270 and its subdirectories -I: Current time: Fri Apr 10 07:18:05 -12 2026 -I: pbuilder-time-stamp: 1775848685 +I: removing directory /srv/workspace/pbuilder/2999135 and its subdirectories +I: Current time: Sun Mar 9 04:13:16 +14 2025 +I: pbuilder-time-stamp: 1741443196