Diff of the two buildlogs: -- --- b1/build.log 2025-02-28 23:27:16.380786215 +0000 +++ b2/build.log 2025-02-28 23:30:37.711659061 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Feb 28 11:25:15 -12 2025 -I: pbuilder-time-stamp: 1740785115 +I: Current time: Fri Apr 3 19:50:18 +14 2026 +I: pbuilder-time-stamp: 1775195418 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -31,51 +31,83 @@ dpkg-source: info: applying numpy2.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/802153/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/D01_modify_environment starting +debug: Running on infom02-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 3 05:50 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='34a2c05adb404e23819b09ef22a6e8e4' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='802153' - PS1='# ' - PS2='> ' + INVOCATION_ID=849cce56f0024b029b510e311f7b64d9 + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=3174647 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3c8M2wL2/pbuilderrc_vDjw --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3c8M2wL2/b1 --logfile b1/build.log python-pbcore_2.1.2+dfsg-11.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3c8M2wL2/pbuilderrc_z2fH --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3c8M2wL2/b2 --logfile b2/build.log python-pbcore_2.1.2+dfsg-11.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' I: uname -a - Linux infom01-amd64 6.1.0-31-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.128-1 (2025-02-07) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.9+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.9-1~bpo12+1 (2025-01-19) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/802153/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -342,7 +374,7 @@ Get: 193 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 8.1.3-5 [468 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 python3-uritools all 4.0.3-1 [28.6 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 python3-xmlschema all 3.4.3-1 [239 kB] -Fetched 86.9 MB in 1s (103 MB/s) +Fetched 86.9 MB in 4s (20.3 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19779 files and directories currently installed.) @@ -980,8 +1012,8 @@ Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Fri Feb 28 23:26:14 UTC 2025. -Universal Time is now: Fri Feb 28 23:26:14 UTC 2025. +Local time is now: Fri Apr 3 05:51:53 UTC 2026. +Universal Time is now: Fri Apr 3 05:51:53 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... @@ -1164,7 +1196,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-pbcore-2.1.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-pbcore_2.1.2+dfsg-11_source.changes +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-pbcore-2.1.2+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-pbcore_2.1.2+dfsg-11_source.changes dpkg-buildpackage: info: source package python-pbcore dpkg-buildpackage: info: source version 2.1.2+dfsg-11 dpkg-buildpackage: info: source distribution unstable @@ -1182,8 +1218,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1224,8 +1260,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1246,8 +1282,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1259,53 +1295,53 @@ running build running build_py creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore -copying pbcore/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore copying pbcore/sequence.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore +copying pbcore/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry copying pbcore/chemistry/chemistry.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry copying pbcore/chemistry/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data +copying pbcore/data/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io +copying pbcore/io/FofnIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io copying pbcore/io/base.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io -copying pbcore/io/FastqIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io copying pbcore/io/opener.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io +copying pbcore/io/VcfIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io copying pbcore/io/GffIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io -copying pbcore/io/FofnIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io -copying pbcore/io/FastaIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io copying pbcore/io/_utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io copying pbcore/io/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io -copying pbcore/io/VcfIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io +copying pbcore/io/FastqIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io +copying pbcore/io/FastaIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model +copying pbcore/model/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model +copying pbcore/model/baseRegions.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util -copying pbcore/util/statistics.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util -copying pbcore/util/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util copying pbcore/util/decorators.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util +copying pbcore/util/statistics.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util copying pbcore/util/ToolRunner.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model -copying pbcore/model/baseRegions.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model -copying pbcore/model/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data -copying pbcore/data/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data +copying pbcore/util/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets +copying pbcore/data/datasets/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/DataSetMetaTypes.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/DataSetUtils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/DataSetMembers.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetErrors.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/DataSetReader.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/DataSetValidator.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/DataSetMembers.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/run_split.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetWriter.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/DataSetValidator.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/DataSetUtils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset +copying pbcore/io/dataset/DataSetMetaTypes.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset copying pbcore/io/dataset/DataSetIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset -copying pbcore/io/dataset/DataSetReader.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -copying pbcore/io/align/BamAlignment.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -copying pbcore/io/align/PacBioBamIndex.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -copying pbcore/io/align/_AlignmentMixin.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -copying pbcore/io/align/BlasrIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -copying pbcore/io/align/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align copying pbcore/io/align/_BamSupport.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align +copying pbcore/io/align/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align copying pbcore/io/align/BamIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets -copying pbcore/data/datasets/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets +copying pbcore/io/align/_AlignmentMixin.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align +copying pbcore/io/align/PacBioBamIndex.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align +copying pbcore/io/align/BamAlignment.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align +copying pbcore/io/align/BlasrIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align running egg_info creating pbcore.egg-info writing pbcore.egg-info/PKG-INFO @@ -1474,8 +1510,8 @@ preparing documents... done copying assets... copying static files... -Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/documentation_options.js +Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/language_data.js Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/basic.css Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/sidebar.js Writing evaluated template result to /build/reproducible-path/python-pbcore-2.1.2+dfsg/doc/_build/html/_static/classic.css @@ -1522,252 +1558,252 @@ cachedir: .pytest_cache rootdir: /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build configfile: pytest.ini -plugins: xdist-3.6.1, cov-5.0.0, typeguard-4.4.2 +plugins: cov-5.0.0, xdist-3.6.1, typeguard-4.4.2 created: 12/12 workers 12 workers [140 items] scheduling tests via LoadScopeScheduling +tests/test_pbdataset_split.py::TestDataSetSplit::test_split +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testBasicOperations +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testIteration tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testBasicOperations tests/test_pbindex.py::TestPbIndex::test_pbindex_bam_consistency +tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs +tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__init__ +tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq1 +tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse +[gw4] [ 0%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse +tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement +tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid +[gw11] [ 1%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq1 +tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq2 +[gw11] [ 2%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq2 +[gw6] [ 2%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testIteration +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByName +[gw6] [ 3%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByName +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessById +[gw6] [ 4%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessById +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByPosition +[gw6] [ 5%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByPosition +[gw7] [ 5%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs +tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs_sorted +[gw7] [ 6%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs_sorted +tests/test_pbcore_io_GffIO.py::TestGffSorting::test_sort_gff +[gw7] [ 7%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_sort_gff +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testSlice +[gw6] [ 7%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testSlice +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_dosLineEndingsFasta tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__init__ -[gw3] [ 0%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__init__ +[gw3] [ 8%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__init__ tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__str__ -[gw3] [ 1%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__str__ +[gw3] [ 9%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test__str__ tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_fromString -[gw3] [ 2%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_fromString +[gw3] [ 10%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_fromString tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement1 -[gw3] [ 2%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement1 +[gw3] [ 10%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement1 tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement2 -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testBasicOperations -tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid -[gw9] [ 3%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid -tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_metatype -tests/test_pbcore_io_GffIO.py::TestGff3Record::test_str -[gw7] [ 4%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_str -tests/test_pbcore_io_GffIO.py::TestGff3Record::test_modification -[gw7] [ 5%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_modification -tests/test_pbcore_io_GffIO.py::TestGff3Record::test_fromString -[gw7] [ 5%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_fromString -[gw3] [ 6%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement2 +[gw3] [ 11%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_reverse_complement2 tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_len -[gw3] [ 7%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_len +[gw3] [ 12%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_len tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_eq -[gw3] [ 7%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_eq -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testIteration -[gw5] [ 8%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testIteration -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByName -[gw5] [ 9%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByName -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessById -[gw5] [ 10%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessById -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByPosition -[gw5] [ 10%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testAccessByPosition -tests/test_pbdataset_split.py::TestDataSetSplit::test_split -tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__init__ -[gw4] [ 11%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__init__ +[gw3] [ 12%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_eq +[gw5] [ 13%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__init__ tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__str__ -[gw4] [ 12%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__str__ +[gw5] [ 14%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test__str__ tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_fromString -[gw4] [ 12%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_fromString +[gw5] [ 15%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_fromString tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement1 -[gw4] [ 13%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement1 +[gw5] [ 15%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement1 tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement2 -[gw4] [ 14%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement2 +[gw5] [ 16%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_reverse_complement2 tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_len -[gw4] [ 15%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_len +[gw5] [ 17%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_len tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_eq -[gw4] [ 15%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_eq -tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq1 -[gw11] [ 16%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq1 -tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq2 -[gw11] [ 17%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq2 -[gw1] [ 17%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testBasicOperations +[gw5] [ 17%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_eq +tests/test_pbcore_io_GffIO.py::TestGff3Record::test_str +[gw8] [ 18%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_str +tests/test_pbcore_io_GffIO.py::TestGff3Record::test_modification +[gw8] [ 19%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_modification +tests/test_pbcore_io_GffIO.py::TestGff3Record::test_fromString +[gw8] [ 20%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_fromString +[gw1] [ 20%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testBasicOperations tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testStrandOrientation -[gw1] [ 18%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testStrandOrientation +[gw1] [ 21%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testStrandOrientation tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadName -[gw1] [ 19%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadName -[gw2] [ 20%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testBasicOperations -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testStrandOrientation -[gw2] [ 20%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testStrandOrientation -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadName -[gw2] [ 21%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadName -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedRead -[gw2] [ 22%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedRead -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedRead -[gw2] [ 22%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedRead -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedReference -[gw10] [ 23%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_bam_consistency +[gw1] [ 22%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadName +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedRead +[gw1] [ 22%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedRead +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedRead +[gw1] [ 23%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedRead +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedReference +[gw1] [ 24%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedReference +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedReference +[gw1] [ 25%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedReference +tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testDeletionQV +[gw10] [ 25%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_bam_consistency tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming -[gw2] [ 24%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedReference -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedReference -[gw2] [ 25%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedReference -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testDeletionQV -tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs -[gw8] [ 25%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs -tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs_sorted -[gw8] [ 26%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_merge_gffs_sorted -tests/test_pbcore_io_GffIO.py::TestGffSorting::test_sort_gff -[gw8] [ 27%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_sort_gff +[gw9] [ 26%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid +tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_metatype [gw9] [ 27%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_metatype tests/test_pbdataset_utils.py::TestDataSetUtils::test_dsIdToSuffix -[gw9] [ 28%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_dsIdToSuffix -[gw2] [ 29%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testDeletionQV -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testTranscript -[gw2] [ 30%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testTranscript -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testClippedAlignments -[gw2] [ 30%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testClippedAlignments -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange -[gw10] [ 31%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming -tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming_entire -[gw10] [ 32%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming_entire -tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse -[gw6] [ 32%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse -tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement -[gw6] [ 33%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement +[gw9] [ 27%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_dsIdToSuffix +[gw4] [ 28%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverseComplement -[gw6] [ 34%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverseComplement +[gw4] [ 29%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverseComplement tests/test_pbcore_util_sequences.py::TestReverseComplement::test_iupac -[gw6] [ 35%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_iupac +[gw4] [ 30%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_iupac tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement_error -[gw6] [ 35%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement_error -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testSlice -[gw5] [ 36%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::testSlice -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_dosLineEndingsFasta -[gw5] [ 37%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_dosLineEndingsFasta -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedRead -[gw1] [ 37%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedRead -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedRead -[gw1] [ 38%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedRead -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedReference -[gw1] [ 39%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testAlignedReference -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedReference -[gw1] [ 40%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testUnalignedReference -tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testDeletionQV -[gw1] [ 40%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testDeletionQV +[gw4] [ 30%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_complement_error +[gw10] [ 31%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming +tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming_entire +[gw10] [ 32%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_streaming_entire +[gw1] [ 32%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testDeletionQV tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testTranscript -[gw1] [ 41%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testTranscript +[gw2] [ 33%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testBasicOperations +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testStrandOrientation +[gw2] [ 34%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testStrandOrientation +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadName +[gw2] [ 35%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadName +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedRead +[gw2] [ 35%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedRead +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedRead +[gw2] [ 36%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedRead +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedReference +[gw2] [ 37%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testAlignedReference +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedReference +[gw2] [ 37%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testUnalignedReference +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testDeletionQV +[gw6] [ 38%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_dosLineEndingsFasta +[gw1] [ 39%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testTranscript tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testClippedAlignments -[gw1] [ 42%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testClippedAlignments +[gw1] [ 40%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testClippedAlignments +[gw2] [ 40%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testDeletionQV +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testTranscript tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsInRange -tests/test_pbcore_io_GffIO.py::TestGff3Record::test_get -tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_not_equal -[gw7] [ 42%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_get +[gw2] [ 41%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testTranscript +tests/test_pbcore_io_GffIO.py::TestGffSorting::test_empty_file +tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq3 +[gw11] [ 42%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq3 tests/test_pbcore_io_FofnIO.py::test_simple -[gw3] [ 43%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_not_equal -tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testBasicOperations -[gw7] [ 44%] PASSED tests/test_pbcore_io_FofnIO.py::test_simple +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testClippedAlignments +[gw2] [ 42%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testClippedAlignments +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange +tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_readWeirdFastaIndex +[gw6] [ 43%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_readWeirdFastaIndex +[gw11] [ 44%] PASSED tests/test_pbcore_io_FofnIO.py::test_simple tests/test_pbcore_io_FofnIO.py::test_empty_lines -[gw3] [ 45%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testBasicOperations -[gw7] [ 45%] PASSED tests/test_pbcore_io_FofnIO.py::test_empty_lines -tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq3 -tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_not_equal -[gw4] [ 46%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_not_equal +[gw11] [ 45%] PASSED tests/test_pbcore_io_FofnIO.py::test_empty_lines +[gw7] [ 45%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_empty_file +tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testBasicOperations tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_retrieve_read_group_properties -[gw11] [ 47%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqWriter::test_writeFastq3 +tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_not_equal +[gw3] [ 46%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaRecord::test_not_equal +[gw7] [ 47%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testBasicOperations +tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_not_equal tests/test_pbcore_io_BlasrIO.py::test_m4 -[gw0] [ 47%] PASSED tests/test_pbdataset_split.py::TestDataSetSplit::test_split +[gw5] [ 47%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqRecord::test_not_equal +tests/test_pbcore_io_GffIO.py::TestGff3Record::test_get +[gw3] [ 48%] PASSED tests/test_pbcore_io_BlasrIO.py::test_m4 +[gw8] [ 49%] PASSED tests/test_pbcore_io_GffIO.py::TestGff3Record::test_get +tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_readFasta +tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta1 +[gw5] [ 50%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_readFasta +[gw8] [ 50%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta1 +[gw6] [ 51%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_retrieve_read_group_properties tests/test_pbdataset_utils.py::TestDataSetUtils::test_divideKeys_keysToRanges -tests/test_pbcore_io_GffIO.py::TestGffSorting::test_empty_file -[gw11] [ 48%] PASSED tests/test_pbcore_io_BlasrIO.py::test_m4 -tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws +[gw9] [ 52%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_divideKeys_keysToRanges tests/test_pbindex.py::TestPbIndex::test_pbindex_with_zmw_index tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse_complement_error -tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_readWeirdFastaIndex -[gw6] [ 49%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse_complement_error -tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq1 -[gw8] [ 50%] PASSED tests/test_pbcore_io_GffIO.py::TestGffSorting::test_empty_file -[gw5] [ 50%] PASSED tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_readWeirdFastaIndex -tests/test_pbcore_io_GffIO.py::TestGffReader::test_headers -[gw9] [ 51%] PASSED tests/test_pbdataset_utils.py::TestDataSetUtils::test_divideKeys_keysToRanges -tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta1 -[gw10] [ 52%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_with_zmw_index -[gw6] [ 52%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq1 -[gw5] [ 53%] PASSED tests/test_pbcore_io_GffIO.py::TestGffReader::test_headers +[gw4] [ 52%] PASSED tests/test_pbcore_util_sequences.py::TestReverseComplement::test_reverse_complement_error tests/test_pbcore_io_FastqIO.py::TestQvConversion::testAsciiFromQvs -[gw10] [ 54%] PASSED tests/test_pbcore_io_FastqIO.py::TestQvConversion::testAsciiFromQvs -tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testQStartEndUnavailable -[gw4] [ 55%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_retrieve_read_group_properties -tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_readFasta -[gw8] [ 55%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_readFasta -[gw9] [ 56%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta1 -tests/test_pbcore_io_FofnIO.py::test_absolutifying -[gw7] [ 57%] PASSED tests/test_pbcore_io_FofnIO.py::test_absolutifying -tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testInvalidOperations +[gw9] [ 53%] PASSED tests/test_pbcore_io_FastqIO.py::TestQvConversion::testAsciiFromQvs tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_sample_names -tests/test_pbcore_io_BlasrIO.py::test_m5 -[gw11] [ 57%] PASSED tests/test_pbcore_io_BlasrIO.py::test_m5 -[gw4] [ 58%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_sample_names -[gw3] [ 59%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testQStartEndUnavailable -[gw7] [ 60%] PASSED tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testInvalidOperations -tests/test_dataset_run_split.py::test +[gw6] [ 54%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_sample_names tests/test_pbcore_util.py::TestStatistics::test_accuracy_as_phred_qv -[gw4] [ 60%] PASSED tests/test_pbcore_util.py::TestStatistics::test_accuracy_as_phred_qv +[gw6] [ 55%] PASSED tests/test_pbcore_util.py::TestStatistics::test_accuracy_as_phred_qv +tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testQStartEndUnavailable +tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq1 +[gw4] [ 55%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq1 +[gw0] [ 56%] PASSED tests/test_pbdataset_split.py::TestDataSetSplit::test_split +tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws +[gw7] [ 57%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestCCSBam::testQStartEndUnavailable +tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testInvalidOperations +[gw7] [ 57%] PASSED tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testInvalidOperations +[gw10] [ 58%] PASSED tests/test_pbindex.py::TestPbIndex::test_pbindex_with_zmw_index +tests/test_pbcore_io_GffIO.py::TestGffReader::test_headers +[gw10] [ 59%] PASSED tests/test_pbcore_io_GffIO.py::TestGffReader::test_headers +tests/test_pbcore_io_FofnIO.py::test_absolutifying +[gw11] [ 60%] PASSED tests/test_pbcore_io_FofnIO.py::test_absolutifying tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeHeader -[gw11] [ 61%] SKIPPED tests/test_dataset_run_split.py::test -[gw3] [ 62%] PASSED tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeHeader -tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq2 +[gw11] [ 60%] PASSED tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeHeader tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_dosLineEndingsFasta -tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta2 tests/test_pbcore_io_FastqIO.py::TestQvConversion::testQvsFromAscii -[gw10] [ 62%] PASSED tests/test_pbcore_io_FastqIO.py::TestQvConversion::testQvsFromAscii -[gw9] [ 63%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta2 -tests/test_pbcore_io_GffIO.py::TestGffReader::test__iter__ -[gw5] [ 64%] PASSED tests/test_pbcore_io_GffIO.py::TestGffReader::test__iter__ -tests/test_pbcore_io_AlnFileReaders.py::TestMissingHeaderM5::test_retrieve_read_group_properties -[gw6] [ 65%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq2 -tests/test_pbcore_io_AlnFileReaders.py::TestTranscriptBam::test_transcript_set_support -[gw6] [ 65%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestTranscriptBam::test_transcript_set_support -[gw8] [ 66%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_dosLineEndingsFasta -tests/test_pbcore_io_AlnFileReaders.py::TestBarcodedBam::test_read_lima_demultiplexed_bam -tests/test_pbcore_io_AlnFileReaders.py::TestUpdatedChemistryMapping::test_load_updated_mapping +tests/test_pbcore_io_BlasrIO.py::test_m5 +[gw3] [ 61%] PASSED tests/test_pbcore_io_BlasrIO.py::test_m5 +tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta2 +[gw8] [ 62%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaWriter::test_writeFasta2 +[gw9] [ 62%] PASSED tests/test_pbcore_io_FastqIO.py::TestQvConversion::testQvsFromAscii +tests/test_dataset_run_split.py::test tests/test_pbcore_io_AlnFileReaders.py::TestEmptyBam::test_empty_bam_reads_in_range -[gw10] [ 67%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestBarcodedBam::test_read_lima_demultiplexed_bam +[gw3] [ 63%] SKIPPED tests/test_dataset_run_split.py::test tests/test_pbcore_util.py::TestStatistics::test_phred_qv_as_accuracy +[gw6] [ 64%] PASSED tests/test_pbcore_util.py::TestStatistics::test_phred_qv_as_accuracy +tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq2 +tests/test_pbcore_io_VcfIO.py::TestVcfSorting::test_merge_vcfs_sorted +[gw4] [ 65%] PASSED tests/test_pbcore_io_FastqIO.py::TestFastqReader::test_readFastq2 +[gw8] [ 65%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestEmptyBam::test_empty_bam_reads_in_range +[gw6] [ 66%] PASSED tests/test_pbcore_io_VcfIO.py::TestVcfSorting::test_merge_vcfs_sorted +tests/test_pbcore_io_AlnFileReaders.py::TestBarcodedBam::test_read_lima_demultiplexed_bam +[gw9] [ 67%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestBarcodedBam::test_read_lima_demultiplexed_bam +[gw5] [ 67%] PASSED tests/test_pbcore_io_FastaIO.py::TestFastaReader::test_dosLineEndingsFasta +tests/test_pbcore_extract_bam_sequence.py::TestCase::test_reverse_complement +tests/test_pbcore_io_GffIO.py::TestGffReader::test__iter__ +[gw10] [ 68%] PASSED tests/test_pbcore_io_GffIO.py::TestGffReader::test__iter__ tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testIpd -[gw7] [ 67%] PASSED tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testIpd -[gw9] [ 68%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestUpdatedChemistryMapping::test_load_updated_mapping +[gw7] [ 69%] PASSED tests/test_pbcore_io_unaligned_bam.py::TestUnalignedBam::testIpd tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeRecord -[gw3] [ 69%] PASSED tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeRecord -[gw4] [ 70%] PASSED tests/test_pbcore_util.py::TestStatistics::test_phred_qv_as_accuracy -tests/test_pbcore_extract_bam_sequence.py::TestCase::test_reverse_complement -[gw11] [ 70%] PASSED tests/test_pbcore_extract_bam_sequence.py::TestCase::test_reverse_complement -[gw8] [ 71%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestEmptyBam::test_empty_bam_reads_in_range -[gw5] [ 72%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMissingHeaderM5::test_retrieve_read_group_properties +[gw11] [ 70%] PASSED tests/test_pbcore_io_GffIO.py::TestGffWriter::test_writeRecord +tests/test_pbcore_io_AlnFileReaders.py::TestTranscriptBam::test_transcript_set_support +[gw3] [ 70%] SKIPPED tests/test_pbcore_io_AlnFileReaders.py::TestTranscriptBam::test_transcript_set_support +tests/test_pbcore_io_AlnFileReaders.py::TestUpdatedChemistryMapping::test_load_updated_mapping +[gw8] [ 71%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestUpdatedChemistryMapping::test_load_updated_mapping tests/test_pbcore_io_lossless_bam.py::TestCase::test_1 -[gw5] [ 72%] SKIPPED tests/test_pbcore_io_lossless_bam.py::TestCase::test_1 -tests/test_pbcore_io_VcfIO.py::TestVcfSorting::test_merge_vcfs_sorted -[gw6] [ 73%] PASSED tests/test_pbcore_io_VcfIO.py::TestVcfSorting::test_merge_vcfs_sorted -[gw2] [ 74%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange +[gw6] [ 72%] SKIPPED tests/test_pbcore_io_lossless_bam.py::TestCase::test_1 +[gw5] [ 72%] PASSED tests/test_pbcore_extract_bam_sequence.py::TestCase::test_reverse_complement +tests/test_pbcore_io_AlnFileReaders.py::TestMissingHeaderM5::test_retrieve_read_group_properties +[gw2] [ 73%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadGroupTable -[gw2] [ 75%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadGroupTable +[gw2] [ 74%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadGroupTable tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testSequencingChemistry +[gw1] [ 75%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsInRange [gw2] [ 75%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testSequencingChemistry tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testSpecVersion -[gw2] [ 76%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testSpecVersion -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadScore -[gw2] [ 77%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadScore -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_sample_name_default -[gw2] [ 77%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_sample_name_default -tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_library_name_default -[gw2] [ 78%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_library_name_default -[gw1] [ 79%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsInRange tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadGroupTable -[gw1] [ 80%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadGroupTable +[gw5] [ 76%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestMissingHeaderM5::test_retrieve_read_group_properties +[gw2] [ 77%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testSpecVersion +[gw1] [ 77%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadGroupTable +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadScore tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testSequencingChemistry -[gw1] [ 80%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testSequencingChemistry +[gw2] [ 78%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadScore +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_sample_name_default +[gw1] [ 79%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testSequencingChemistry tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testMapQV -[gw1] [ 81%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testMapQV +[gw2] [ 80%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_sample_name_default +tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_library_name_default +[gw1] [ 80%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testMapQV +[gw2] [ 81%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::test_library_name_default tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testHoleNumbers -[gw0] [ 82%] PASSED tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws -tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws_targetsize [gw1] [ 82%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testHoleNumbers tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testErrorCounts -[gw1] [ 83%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testErrorCounts +[gw1] [ 82%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testErrorCounts tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsByName -[gw1] [ 84%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsByName +[gw1] [ 83%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsByName tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_empty_bam -[gw1] [ 85%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_empty_bam +[gw1] [ 84%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_empty_bam tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity +[gw0] [ 85%] PASSED tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws +tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws_targetsize [gw1] [ 85%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity_unindexed [gw1] [ 86%] PASSED tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity_unindexed @@ -1810,11 +1846,6 @@ [gw0] [100%] SKIPPED tests/test_pbdataset_split.py::TestDataSetSplit::test_split_read_groups =============================== warnings summary =============================== -tests/test_pbdataset_utils.py: 10 warnings -tests/test_pbdataset_split.py: 249 warnings - /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/utils.py:24: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). - time = datetime.datetime.utcnow().strftime("%y%m%d_%H%M%S%f")[:-3] - tests/test_pbcore_io_FastqIO.py: 11 warnings /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FastqIO.py:239: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. return (np.clip(a, 0, 93).astype(np.uint8) + 33).tostring().decode("ascii") @@ -1832,6 +1863,11 @@ /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamAlignment.py:368: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. return y.tostring().decode("ascii") +tests/test_pbdataset_utils.py: 10 warnings +tests/test_pbdataset_split.py: 249 warnings + /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/utils.py:24: DeprecationWarning: datetime.datetime.utcnow() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.now(datetime.UTC). + time = datetime.datetime.utcnow().strftime("%y%m%d_%H%M%S%f")[:-3] + tests/test_pbcore_io_AlnFileReaders.py: 118 warnings tests/test_pbcore_extract_bam_sequence.py: 1 warning /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamAlignment.py:356: DeprecationWarning: tostring() is deprecated. Use tobytes() instead. @@ -1855,27 +1891,27 @@ Coverage XML written to file coverage.xml ============================= slowest 20 durations ============================= -0.18s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_by_contigs_with_split_and_maxChunks -0.14s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_by_contigs_with_split -0.12s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws_targetsize -0.09s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsInRange -0.09s call tests/test_pbdataset_split.py::TestDataSetSplit::test_contigset_split -0.09s call tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange -0.08s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws -0.06s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split -0.03s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity_unindexed -0.02s call tests/test_pbdataset_split.py::TestDataSetSplit::test_refWindows -0.02s call tests/test_pbindex.py::TestPbIndex::test_pbindex_bam_consistency +0.33s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_by_contigs_with_split_and_maxChunks +0.25s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_by_contigs_with_split +0.23s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws_targetsize +0.15s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split_zmws +0.14s call tests/test_pbdataset_split.py::TestDataSetSplit::test_contigset_split +0.14s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testReadsInRange +0.13s call tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testReadsInRange +0.10s call tests/test_pbdataset_split.py::TestDataSetSplit::test_split +0.05s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity_unindexed +0.04s setup tests/test_pbcore_extract_bam_sequence.py::TestCase::test_reverse_complement +0.03s call tests/test_pbdataset_split.py::TestDataSetSplit::test_refWindows +0.03s call tests/test_pbindex.py::TestPbIndex::test_pbindex_bam_consistency +0.03s call tests/test_pbdataset_split.py::TestDataSetSplit::test_subreadset_split_metadata_element_name +0.03s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity +0.02s call tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid +0.02s setup tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testBasicOperations 0.02s setup tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testBasicOperations -0.02s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::test_alignment_identity -0.02s call tests/test_pbdataset_split.py::TestDataSetSplit::test_subreadset_split_metadata_element_name +0.02s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testHoleNumbers 0.02s setup tests/test_pbcore_io_AlnFileReaders.py::TestMultipleReadGroups::test_retrieve_read_group_properties -0.01s setup tests/test_pbcore_io_AlnFileReaders.py::TestBasicBam::testBasicOperations -0.01s call tests/test_pbcore_io_AlnFileReaders.py::TestIndexedBam::testHoleNumbers 0.01s call tests/test_pbcore_io_FastaTable.py::TestIndexedFastaReader::test_dosLineEndingsFasta -0.01s call tests/test_pbcore_io_AlnFileReaders.py::TestMissingHeaderM5::test_retrieve_read_group_properties -0.01s call tests/test_pbdataset_utils.py::TestDataSetUtils::test_get_dataset_uuid -================ 122 passed, 18 skipped, 461 warnings in 2.36s ================= +================ 122 passed, 18 skipped, 461 warnings in 3.73s ================= I: pybuild pybuild:334: rm -rfv /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/coverage.xml /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/nosetests.xml removed '/build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/coverage.xml' removed '/build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/nosetests.xml' @@ -1899,8 +1935,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1980,220 +2016,220 @@ check.warn(importable) running install_lib creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.coverage -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/README.md -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/.gitignore -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/sequence.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/chemistry.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/resources copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/resources/mapping.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/resources -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/__pycache__/chemistry.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/chemistry/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/__pycache__ -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/base.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FastqIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/opener.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/GffIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FofnIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FastaIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/_utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetMetaTypes.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetUtils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetMembers.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetErrors.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/run_split.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetWriter.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetValidator.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetReader.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetValidator.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetUtils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetWriter.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetErrors.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMetaTypes.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/run_split.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/utils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetReader.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMembers.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/GffIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/base.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/_utils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/VcfIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FofnIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/opener.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FastqIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/VcfIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamAlignment.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/PacBioBamIndex.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/_AlignmentMixin.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BlasrIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/_BamSupport.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BamAlignment.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/_AlignmentMixin.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BamIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BlasrIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/_BamSupport.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/PacBioBamIndex.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/statistics.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/decorators.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/ToolRunner.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/statistics.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/ToolRunner.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/decorators.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model/baseRegions.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/variants.gff -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/barcodes-ed65-450.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/lambdaNEB.fa -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.aligned_subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/blasr-output.m4 -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/weird.fa -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.ccs.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/chemistry.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/barcodes-ed65-450.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons_tiny.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.aligned_subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/barcodes-ed65-450.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty2.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.ccs.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/ccsread.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/subread.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/reference.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreadset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/subreadSetWithStats.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/alignment.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/barcode.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/lambda.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/ccsread.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/lambda.referenceset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/subread.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.referenceset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/ccsaligned.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/subreadSetWithStats.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/reference.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/contig.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/fofn.fofn -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreadset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.pbalign.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/barcode.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk1contigs.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m150430_142051_Mon_p1_b25.sts.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/fofn.fofn -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/lambda.referenceset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/contig.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.reference.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/ccsaligned.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/alignment.dataset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/CollectionMetadata.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/empty_lambda.aligned.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.alignmentset.chunk0contigs.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim0.subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/pbalchemysim1.pbalign.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m150616_053259_ethan_c100710482550000001823136404221563_s1_p0.sts.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/lambda.alignmentset.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/CollectionMetadata.xml -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/lambdaNEB.fa.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty2.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/datasets/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.subreads.fake_bc.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/weird.fa.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.scraps.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.bai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/Fluidigm_human_amplicons.fasta.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/blasr-output.m4 -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/blasr-output.m5 -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty2.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/variants.gff -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/lambdaNEB.fa.fai -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.ccs.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/weird.fa -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.aligned_subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/__pycache__ -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty2.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.ccs.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m130727_114215_42211_c100569412550000001823090301191423_s1_p0.ccs.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/lambdaNEB.fa -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/m140905_042212_sidney_c100564852550000001823085912221377_s1_X0.aligned_subreads.bam.pbi -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/data/empty.aligned_subreads.bam -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetErrors.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetReader.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetValidator.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetMembers.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/run_split.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetWriter.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetUtils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetMetaTypes.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMembers.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetReader.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetValidator.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetMetaTypes.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetErrors.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/utils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/run_split.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetWriter.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetUtils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/__pycache__/DataSetIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/dataset/DataSetIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FofnIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/base.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/opener.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/VcfIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/GffIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/_BamSupport.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/_AlignmentMixin.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/PacBioBamIndex.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BamAlignment.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BlasrIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/_BamSupport.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/PacBioBamIndex.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/BamIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/__pycache__/_AlignmentMixin.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BamAlignment.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/align/BlasrIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/_utils.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FastqIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/FastaIO.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FastqIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/_utils.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FastaIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/opener.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/GffIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/FofnIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/VcfIO.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/io/__pycache__/base.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__pycache__ +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/model/baseRegions.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/decorators.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/statistics.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/ToolRunner.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util +creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/decorators.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/ToolRunner.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/util/__pycache__/statistics.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/__init__.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/sequence.py -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/__pycache__/sequence.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/__pycache__ copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/pbcore/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/__pycache__ -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/.gitignore -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v -creating /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache/v/cache -copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.pytest_cache/README.md -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/.pytest_cache +copying /build/reproducible-path/python-pbcore-2.1.2+dfsg/.pybuild/cpython3_3.13_pbcore/build/.coverage -> /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/chemistry.py to chemistry.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/chemistry/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/base.py to base.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FastqIO.py to FastqIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/opener.py to opener.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/GffIO.py to GffIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FofnIO.py to FofnIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FastaIO.py to FastaIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/_utils.py to _utils.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetMetaTypes.py to DataSetMetaTypes.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetUtils.py to DataSetUtils.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetMembers.py to DataSetMembers.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetErrors.py to DataSetErrors.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetReader.py to DataSetReader.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetValidator.py to DataSetValidator.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetMembers.py to DataSetMembers.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/run_split.py to run_split.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetWriter.py to DataSetWriter.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/utils.py to utils.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetValidator.py to DataSetValidator.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetUtils.py to DataSetUtils.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetMetaTypes.py to DataSetMetaTypes.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetIO.py to DataSetIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/dataset/DataSetReader.py to DataSetReader.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FofnIO.py to FofnIO.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/base.py to base.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/opener.py to opener.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/VcfIO.py to VcfIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/BamAlignment.py to BamAlignment.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/PacBioBamIndex.py to PacBioBamIndex.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/_AlignmentMixin.py to _AlignmentMixin.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/BlasrIO.py to BlasrIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/GffIO.py to GffIO.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/_BamSupport.py to _BamSupport.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/BamIO.py to BamIO.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/statistics.py to statistics.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/_AlignmentMixin.py to _AlignmentMixin.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/PacBioBamIndex.py to PacBioBamIndex.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/BamAlignment.py to BamAlignment.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/align/BlasrIO.py to BlasrIO.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/_utils.py to _utils.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FastqIO.py to FastqIO.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/io/FastaIO.py to FastaIO.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model/baseRegions.py to baseRegions.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/decorators.py to decorators.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/ToolRunner.py to ToolRunner.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model/baseRegions.py to baseRegions.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/model/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/datasets/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/data/__init__.py to __init__.cpython-313.pyc +byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/__init__.py to __init__.cpython-313.pyc -byte-compiling /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore/sequence.py to sequence.cpython-313.pyc running install_egg_info Copying pbcore.egg-info to /build/reproducible-path/python-pbcore-2.1.2+dfsg/debian/python3-pbcore/usr/lib/python3.13/dist-packages/pbcore-2.2.0.egg-info Skipping SOURCES.txt @@ -2243,12 +2279,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/3174647/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/802153 and its subdirectories -I: Current time: Fri Feb 28 11:27:15 -12 2025 -I: pbuilder-time-stamp: 1740785235 +I: removing directory /srv/workspace/pbuilder/3174647 and its subdirectories +I: Current time: Fri Apr 3 19:53:36 +14 2026 +I: pbuilder-time-stamp: 1775195616