Diff of the two buildlogs: -- --- b1/build.log 2025-09-17 00:18:12.599023158 +0000 +++ b2/build.log 2025-09-17 00:33:38.904216683 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Sep 16 11:57:38 -12 2025 -I: pbuilder-time-stamp: 1758067058 +I: Current time: Tue Oct 20 20:41:13 +14 2026 +I: pbuilder-time-stamp: 1792478473 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -31,53 +31,85 @@ dpkg-source: info: applying doxygen_longtabu I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/2577589/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/D01_modify_environment starting +debug: Running on ionos15-amd64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 20 06:41 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='amd64' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=40 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='amd64' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=amd64 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=x86_64 + HOST_ARCH=amd64 IFS=' ' - INVOCATION_ID='e4cec320ff0740ec89f1455c0d6cb850' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='2577589' - PS1='# ' - PS2='> ' + INVOCATION_ID=9052c32c3b674700ba8bedefed8fbf3a + LANG=C + LANGUAGE=et_EE:et + LC_ALL=C + MACHTYPE=x86_64-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2624888 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VJcl0sYo/pbuilderrc_ptMa --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VJcl0sYo/b1 --logfile b1/build.log seqan-raptor_3.0.1+ds-10.dsc' - SUDO_GID='110' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='105' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.VJcl0sYo/pbuilderrc_vRvV --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.VJcl0sYo/b2 --logfile b2/build.log seqan-raptor_3.0.1+ds-10.dsc' + SUDO_GID=111 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=106 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos1-amd64 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.12.43-1 (2025-08-27) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/2577589/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -334,7 +366,7 @@ Get: 181 http://deb.debian.org/debian unstable/main amd64 texlive-pictures all 2025.20250727-3 [22.1 MB] Get: 182 http://deb.debian.org/debian unstable/main amd64 texlive-latex-extra all 2025.20250727-3 [27.4 MB] Get: 183 http://deb.debian.org/debian unstable/main amd64 texlive-plain-generic all 2025.20250727-3 [29.8 MB] -Fetched 288 MB in 40s (7198 kB/s) +Fetched 288 MB in 10s (29.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19917 files and directories currently installed.) @@ -947,8 +979,8 @@ Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed Sep 17 00:02:08 UTC 2025. -Universal Time is now: Wed Sep 17 00:02:08 UTC 2025. +Local time is now: Tue Oct 20 06:43:32 UTC 2026. +Universal Time is now: Tue Oct 20 06:43:32 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:amd64 (1:1.1.8-1+b2) ... @@ -1111,7 +1143,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/seqan-raptor-3.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-raptor_3.0.1+ds-10_source.changes +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/seqan-raptor-3.0.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../seqan-raptor_3.0.1+ds-10_source.changes dpkg-buildpackage: info: source package seqan-raptor dpkg-buildpackage: info: source version 3.0.1+ds-10 dpkg-buildpackage: info: source distribution unstable @@ -1179,8 +1215,8 @@ -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for module 'libxxhash' -- Found libxxhash, version 0.8.3 --- Configuring done (3.1s) --- Generating done (0.0s) +-- Configuring done (14.8s) +-- Generating done (0.2s) CMake Warning: Manually-specified variables were not used by the project: @@ -1233,7 +1269,7 @@ -- Checking for module 'libxxhash' -- Found libxxhash, version 0.8.3 -- Test dependency: Google Test 1.17.0 found. --- Configuring done (3.2s) +-- Configuring done (8.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -1289,7 +1325,7 @@ -- Checking for module 'libxxhash' -- Found libxxhash, version 0.8.3 -- Test dependency: Google Test 1.17.0 found. --- Configuring done (3.1s) +-- Configuring done (20.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -1321,7 +1357,7 @@ -- Could not find dot tool. Disabling dot support. -- Configuring doc. -- Add doc test. --- Configuring done (0.1s) +-- Configuring done (0.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: @@ -1340,7 +1376,7 @@ debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_build --arch - cd obj-x86_64-linux-gnu && make -j40 "INSTALL=install --strip-program=true" VERBOSE=1 + cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds -B/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu//CMakeFiles/progress.marks @@ -1350,143 +1386,143 @@ make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/depend make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/depend make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/depend -make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade/CMakeFiles/raptor_upgrade.dir/DependInfo.cmake "--color=" +make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/DependInfo.cmake "--color=" -make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare/CMakeFiles/raptor_prepare.dir/DependInfo.cmake "--color=" +make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf/CMakeFiles/raptor_build_hibf.dir/DependInfo.cmake "--color=" +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search/CMakeFiles/raptor_search.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold/CMakeFiles/raptor_threshold.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build -make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build +make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build make[4]: Nothing to be done for '_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build'. make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build -make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 0%] Built target xxhash_project -[ 1%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -[ 3%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp +[ 1%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o +[ 3%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem 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CXX object src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o +[ 5%] Built target xxhash_project +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/prepare && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare/compute_minimiser.cpp +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend -[ 7%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -[ 7%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -[ 11%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -[ 11%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src 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-D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade/raptor_upgrade.cpp -[ 35%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem 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/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/multiple_error_model.cpp -[ 50%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -[ 50%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp +[ 7%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o +[ 9%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o +[ 11%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o +[ 13%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp +[ 23%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o +[ 15%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/__/build/hibf/parse_chopper_pack_line.cpp.o +[ 25%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP 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src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o +[ 29%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 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src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp -[ 60%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -[ 60%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ 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-I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem 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object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o +[ 47%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o +[ 47%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection 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src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o +[ 54%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 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-I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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-I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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-I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp +[ 60%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_threshold.cpp +[ 62%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp +[ 64%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp [ 66%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, - from /usr/include/c++/15/vector:64, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: + from /usr/include/c++/15/algorithm:62, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, - from /usr/include/c++/15/algorithm:62, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13: + from /usr/include/c++/15/vector:64, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ @@ -1505,7 +1541,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1518,7 +1554,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1531,7 +1567,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1544,7 +1580,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1557,7 +1593,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1580,6 +1616,12 @@ /usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’ 616 | typedef SIMDE_POLY128_TYPE simde_poly128; | ^~~~~~~~~~~~~~~~~~ +[ 68%] Linking CXX static library ../../lib/libraptor_threshold.a +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +/usr/bin/ranlib ../../lib/libraptor_threshold.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17, from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] @@ -1592,6 +1634,7 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ +[ 68%] Built target raptor_threshold In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18, from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] @@ -1604,15 +1647,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 68%] Linking CXX static library ../../lib/libraptor_threshold.a -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -/usr/bin/ranlib ../../lib/libraptor_threshold.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 68%] Built target raptor_threshold -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1623,8 +1659,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1636,7 +1672,7 @@ 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1647,8 +1683,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -1685,18 +1721,14 @@ make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' [ 74%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -[ 74%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -[ 76%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp +[ 74%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp +[ 76%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp [ 78%] Linking CXX static library ../../../lib/libraptor_build_hibf.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build/hibf && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build_hibf.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 78%] Built target raptor_build_hibf [ 80%] Linking CXX static library ../../../lib/libchopper_layout_lib.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1 @@ -1711,22 +1743,22 @@ make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build +make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 84%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o +[ 82%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o [ 84%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp +/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o +/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +[ 84%] Built target raptor_build_hibf [ 86%] Linking CXX static library ../../lib/libraptor_search.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -/usr/bin/ranlib ../../lib/libraptor_search.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 86%] Built target raptor_search In file included from /usr/include/simde/x86/mmx.h:30, from /usr/include/simde/x86/sse.h:33, from /usr/include/simde/x86/avx.h:28, @@ -1740,19 +1772,23 @@ /usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’ 616 | typedef SIMDE_POLY128_TYPE simde_poly128; | ^~~~~~~~~~~~~~~~~~ +/usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o +/usr/bin/ranlib ../../lib/libraptor_search.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +[ 86%] Built target raptor_search [ 88%] Linking CXX static library ../../lib/libraptor_build.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -/usr/bin/ranlib ../../lib/libraptor_build.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' -[ 88%] Built target raptor_build [ 90%] Linking CXX static library ../../lib/libraptor_upgrade.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1 cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o +/usr/bin/ranlib ../../lib/libraptor_build.a /usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o /usr/bin/ranlib ../../lib/libraptor_upgrade.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' +[ 90%] Built target raptor_build [ 90%] Built target raptor_upgrade [ 92%] Linking CXX static library ../../lib/libraptor_argument_parsing.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu/src/argument_parsing && /usr/bin/cmake -P CMakeFiles/raptor_argument_parsing.dir/cmake_clean_target.cmake @@ -1801,7 +1837,7 @@ obj-*/bin/raptor prepare --export-help cwl > debian/raptor-prepare.cwl obj-*/bin/raptor upgrade --export-help cwl > debian/raptor-upgrade.cwl dh_auto_build --arch --builddirectory build_unit - cd build_unit && make -j40 "INSTALL=install --strip-program=true" VERBOSE=1 + cd build_unit && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit -B/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/CMakeFiles /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit//CMakeFiles/progress.marks @@ -1831,95 +1867,95 @@ make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build -make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build +make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/build +make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Nothing to be done for '_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build'. make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 1%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -[ 2%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -[ 3%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -[ 5%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -[ 7%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -[ 7%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -[ 10%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -[ 10%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -[ 11%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 1%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o +[ 2%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o +[ 2%] Built target xxhash_project +[ 3%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o +[ 6%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o +[ 6%] Building CXX object src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o +[ 8%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o +[ 8%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp +[ 11%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o +[ 10%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/prepare && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare/compute_minimiser.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde 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-std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_partitioned_ibf.cpp -[ 26%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -[ 26%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -[ 26%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 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src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp -[ 29%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 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src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp [ 30%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -[ 30%] Built target xxhash_project -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp -[ 31%] Building CXX object 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-I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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21%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o +[ 40%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp +[ 25%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o +[ 41%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o +[ 41%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o +[ 41%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o +[ 41%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem 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CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp +[ 41%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem 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CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp -[ 32%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp -[ 34%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o +[ 41%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp +[ 41%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat 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-I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/bin_size_in_bits.cpp -make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 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-std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp -[ 39%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -[ 39%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o -[ 40%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -[ 41%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build @@ -1940,7 +1976,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1953,7 +1989,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1966,7 +2002,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1979,7 +2015,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -1992,13 +2028,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: -/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] - 20 | : public T, public std::iterator { - | ^~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2009,6 +2039,12 @@ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: +/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] + 20 | : public T, public std::iterator { + | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, from /usr/include/c++/15/vector:64, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45, @@ -2018,7 +2054,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2041,8 +2077,11 @@ /usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’ 616 | typedef SIMDE_POLY128_TYPE simde_poly128; | ^~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16: +[ 44%] Linking CXX static library ../../lib/libraptor_threshold.a +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2053,15 +2092,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 44%] Linking CXX static library ../../lib/libraptor_threshold.a -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -/usr/bin/ranlib ../../lib/libraptor_threshold.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 44%] Built target raptor_threshold -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2072,8 +2104,11 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17: +/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +/usr/bin/ranlib ../../lib/libraptor_threshold.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2084,8 +2119,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2108,8 +2143,9 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17: +[ 44%] Built target raptor_threshold +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2145,11 +2181,11 @@ make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 48%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o [ 49%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -[ 49%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o [ 49%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o -MF CMakeFiles/raptor_build.dir/raptor_build.cpp.o.d -o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/raptor_build.cpp [ 50%] Linking CXX static library ../../../lib/libraptor_build_hibf.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build/hibf && /usr/bin/cmake -P CMakeFiles/raptor_build_hibf.dir/cmake_clean_target.cmake @@ -2158,32 +2194,32 @@ /usr/bin/ranlib ../../../lib/libraptor_build_hibf.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' [ 50%] Built target raptor_build_hibf -[ 51%] Linking CXX static library ../../../lib/libchopper_layout_lib.a +[ 51%] Linking CXX static library ../../lib/libraptor_search.a +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1 +[ 53%] Linking CXX static library ../../../lib/libchopper_layout_lib.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o /usr/bin/ranlib ../../../lib/libchopper_layout_lib.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 51%] Built target chopper_layout_lib +[ 53%] Built target chopper_layout_lib make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/depend make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout/CMakeFiles/raptor_layout.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout/CMakeFiles/raptor_layout.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build +make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 54%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o [ 54%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp +[ 55%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp -[ 55%] Linking CXX static library ../../lib/libraptor_search.a -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1 /usr/bin/ar qc ../../lib/libraptor_search.a CMakeFiles/raptor_search.dir/raptor_search.cpp.o CMakeFiles/raptor_search.dir/search_hibf.cpp.o CMakeFiles/raptor_search.dir/search_ibf.cpp.o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o /usr/bin/ranlib ../../lib/libraptor_search.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' @@ -2204,24 +2240,20 @@ [ 56%] Linking CXX static library ../../lib/libraptor_build.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/cmake -P CMakeFiles/raptor_build.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_build.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o -/usr/bin/ranlib ../../lib/libraptor_build.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 56%] Built target raptor_build [ 58%] Linking CXX static library ../../lib/libraptor_upgrade.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o +/usr/bin/ranlib ../../lib/libraptor_build.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' /usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o /usr/bin/ranlib ../../lib/libraptor_upgrade.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' [ 58%] Built target raptor_upgrade +[ 58%] Built target raptor_build [ 59%] Linking CXX static library ../../lib/libraptor_argument_parsing.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/cmake -P CMakeFiles/raptor_argument_parsing.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_argument_parsing.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_argument_parsing.a "CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o" CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -/usr/bin/ranlib ../../lib/libraptor_argument_parsing.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 59%] Built target raptor_argument_parsing [ 60%] Linking CXX static library ../../lib/libraptor_layout.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/cmake -P CMakeFiles/raptor_layout.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/layout && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_layout.dir/link.txt --verbose=1 @@ -2229,6 +2261,10 @@ /usr/bin/ranlib ../../lib/libraptor_layout.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' [ 60%] Built target raptor_layout +/usr/bin/ar qc ../../lib/libraptor_argument_parsing.a "CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o" CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o +/usr/bin/ranlib ../../lib/libraptor_argument_parsing.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 60%] Built target raptor_argument_parsing make -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/src/CMakeFiles/raptor.dir/DependInfo.cmake "--color=" @@ -2255,27 +2291,27 @@ make -f cli/build/CMakeFiles/build_ibf_compressed_test.dir/build.make cli/build/CMakeFiles/build_ibf_compressed_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api/CMakeFiles/validate_shape.dir/DependInfo.cmake "--color=" -make -f cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build.make cli/build/CMakeFiles/build_ibf_partitioned_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing/CMakeFiles/options_test.dir/DependInfo.cmake "--color=" -make -f cli/build/CMakeFiles/build_ibf_test.dir/build.make cli/build/CMakeFiles/build_ibf_test.dir/depend +make -f cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build.make cli/build/CMakeFiles/build_ibf_partitioned_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_hibf_chopper_test.dir/DependInfo.cmake "--color=" -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_hibf_test.dir/DependInfo.cmake "--color=" +make -f cli/build/CMakeFiles/build_ibf_test.dir/build.make cli/build/CMakeFiles/build_ibf_test.dir/depend make -f cli/search/CMakeFiles/search_hibf_test.dir/build.make cli/search/CMakeFiles/search_hibf_test.dir/depend +make -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_ibf_compressed_test.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/depend +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_hibf_test.dir/DependInfo.cmake "--color=" +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_ibf_partitioned_test.dir/DependInfo.cmake "--color=" make -f cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/depend +make -f cli/search/CMakeFiles/search_ibf_test.dir/build.make cli/search/CMakeFiles/search_ibf_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build/CMakeFiles/build_ibf_test.dir/DependInfo.cmake "--color=" -make -f cli/search/CMakeFiles/search_ibf_test.dir/build.make cli/search/CMakeFiles/search_ibf_test.dir/depend +make -f cli/upgrade/CMakeFiles/upgrade_test.dir/build.make cli/upgrade/CMakeFiles/upgrade_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/CMakeFiles/search_hibf_test.dir/DependInfo.cmake "--color=" -make -f cli/upgrade/CMakeFiles/upgrade_test.dir/build.make cli/upgrade/CMakeFiles/upgrade_test.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' @@ -2285,144 +2321,144 @@ make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade/CMakeFiles/upgrade_test.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f api/CMakeFiles/memory_usage.dir/build.make api/CMakeFiles/memory_usage.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f cli/build/CMakeFiles/build_hibf_test.dir/build.make cli/build/CMakeFiles/build_hibf_test.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f api/CMakeFiles/issue_142.dir/build.make api/CMakeFiles/issue_142.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f api/CMakeFiles/memory_usage.dir/build.make api/CMakeFiles/memory_usage.dir/build make -f api/CMakeFiles/validate_shape.dir/build.make api/CMakeFiles/validate_shape.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f cli/argument_parsing/CMakeFiles/options_test.dir/build.make cli/argument_parsing/CMakeFiles/options_test.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f cli/build/CMakeFiles/build_hibf_chopper_test.dir/build.make cli/build/CMakeFiles/build_hibf_chopper_test.dir/build -make -f cli/build/CMakeFiles/build_ibf_compressed_test.dir/build.make cli/build/CMakeFiles/build_ibf_compressed_test.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f cli/build/CMakeFiles/build_hibf_test.dir/build.make cli/build/CMakeFiles/build_hibf_test.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f cli/build/CMakeFiles/build_ibf_compressed_test.dir/build.make cli/build/CMakeFiles/build_ibf_compressed_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build.make cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f cli/build/CMakeFiles/build_ibf_test.dir/build.make cli/build/CMakeFiles/build_ibf_test.dir/build +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f cli/search/CMakeFiles/search_hibf_test.dir/build.make cli/search/CMakeFiles/search_hibf_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f cli/build/CMakeFiles/build_ibf_test.dir/build.make cli/build/CMakeFiles/build_ibf_test.dir/build +make -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +make -f cli/search/CMakeFiles/search_ibf_test.dir/build.make cli/search/CMakeFiles/search_ibf_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make -f cli/upgrade/CMakeFiles/upgrade_test.dir/build.make cli/upgrade/CMakeFiles/upgrade_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -make -f cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/build -make -f cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build.make cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/build -make -f cli/search/CMakeFiles/search_ibf_test.dir/build.make cli/search/CMakeFiles/search_ibf_test.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 67%] Building CXX object cli/build/CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -[ 67%] Building CXX object api/CMakeFiles/memory_usage.dir/memory_usage.cpp.o -[ 67%] Building CXX object api/CMakeFiles/validate_shape.dir/validate_shape.cpp.o -[ 68%] Building CXX object cli/build/CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o +[ 68%] Building CXX object api/CMakeFiles/issue_142.dir/issue_142.cpp.o [ 69%] Building CXX object cli/argument_parsing/CMakeFiles/options_test.dir/options_test.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT api/CMakeFiles/memory_usage.dir/memory_usage.cpp.o -MF CMakeFiles/memory_usage.dir/memory_usage.cpp.o.d -o CMakeFiles/memory_usage.dir/memory_usage.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api/memory_usage.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT api/CMakeFiles/validate_shape.dir/validate_shape.cpp.o -MF CMakeFiles/validate_shape.dir/validate_shape.cpp.o.d -o CMakeFiles/validate_shape.dir/validate_shape.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/api/validate_shape.cpp -[ 74%] Building CXX object cli/search/CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o [ 74%] Building CXX object cli/build/CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o -[ 74%] Building CXX object api/CMakeFiles/issue_142.dir/issue_142.cpp.o -[ 74%] Building CXX object cli/build/CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o -[ 75%] Building CXX object cli/build/CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/build/CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -MF CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o.d -o CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/build/build_hibf_test.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 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-I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -MF CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o.d -o CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_ibf_test.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -MF CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o.d -o CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_hibf_preprocessing_test.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/upgrade/CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -MF CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o.d -o CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/upgrade/upgrade_test.cpp -[ 79%] Building CXX object cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -MF CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o.d -o CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_ibf_preprocessing_test.cpp -[ 81%] Building CXX object cli/search/CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/output/\" -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/test/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT cli/search/CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -MF CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o.d -o CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/unit/cli/search/search_ibf_test.cpp [ 82%] Linking CXX executable memory_usage cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/memory_usage.dir/link.txt --verbose=1 [ 83%] Linking CXX executable issue_142 cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/issue_142.dir/link.txt --verbose=1 -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/memory_usage.dir/link.d CMakeFiles/memory_usage.dir/memory_usage.cpp.o -o memory_usage ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 83%] Built target memory_usage /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/issue_142.dir/link.d CMakeFiles/issue_142.dir/issue_142.cpp.o -o issue_142 ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/memory_usage.dir/link.d CMakeFiles/memory_usage.dir/memory_usage.cpp.o -o memory_usage ../lib/libraptor_argument_parsing.a ../lib/libraptor_build.a ../lib/libraptor_build_hibf.a ../lib/libraptor_prepare.a ../lib/libraptor_search.a ../lib/libraptor_threshold.a ../lib/libraptor_upgrade.a ../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' [ 83%] Built target issue_142 -[ 84%] Linking CXX executable build_hibf_chopper_test +[ 83%] Built target memory_usage +[ 84%] Linking CXX executable ../../../bin/chopper +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper.dir/link.txt --verbose=1 +[ 86%] Linking CXX executable build_hibf_chopper_test cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_hibf_chopper_test.dir/link.txt --verbose=1 -[ 86%] Linking CXX executable search_hibf_test +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/chopper.dir/link.d CMakeFiles/chopper.dir/chopper.cpp.o -o ../../../bin/chopper ../../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 87%] Linking CXX executable search_hibf_test +[ 87%] Built target chopper cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_hibf_test.dir/link.txt --verbose=1 -[ 87%] Linking CXX executable search_ibf_test +[ 88%] Linking CXX executable search_ibf_test cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_ibf_test.dir/link.txt --verbose=1 -[ 88%] Linking CXX executable options_test +[ 89%] Linking CXX executable options_test cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/argument_parsing && /usr/bin/cmake -E cmake_link_script CMakeFiles/options_test.dir/link.txt --verbose=1 -[ 89%] Linking CXX executable build_ibf_partitioned_test +[ 91%] Linking CXX executable build_ibf_partitioned_test cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_ibf_partitioned_test.dir/link.txt --verbose=1 -[ 91%] Linking CXX executable build_ibf_compressed_test -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/build && /usr/bin/cmake -E cmake_link_script CMakeFiles/build_ibf_compressed_test.dir/link.txt --verbose=1 -[ 92%] Linking CXX executable search_hibf_preprocessing_test -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script 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--verbose=1 +[ 96%] Linking CXX executable upgrade_test +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/upgrade_test.dir/link.txt --verbose=1 [ 97%] Linking CXX executable search_ibf_preprocessing_test cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_ibf_preprocessing_test.dir/link.txt --verbose=1 +[ 98%] Linking CXX executable search_hibf_preprocessing_test +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/cli/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/search_hibf_preprocessing_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_hibf_chopper_test.dir/link.d CMakeFiles/build_hibf_chopper_test.dir/build_hibf_chopper_test.cpp.o -o build_hibf_chopper_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 97%] Built target build_hibf_chopper_test -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/options_test.dir/link.d CMakeFiles/options_test.dir/options_test.cpp.o -o options_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +[ 98%] Built target build_hibf_chopper_test +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_test.dir/link.d CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -o search_ibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 98%] Built target search_ibf_test /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_partitioned_test.dir/link.d CMakeFiles/build_ibf_partitioned_test.dir/build_ibf_partitioned_test.cpp.o -o build_ibf_partitioned_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 97%] Built target build_ibf_partitioned_test -[ 97%] Built target options_test -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_test.dir/link.d CMakeFiles/search_ibf_test.dir/search_ibf_test.cpp.o -o search_ibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' +[ 98%] Built target build_ibf_partitioned_test /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_hibf_test.dir/link.d CMakeFiles/search_hibf_test.dir/search_hibf_test.cpp.o -o search_hibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 97%] Built target search_ibf_test -[ 97%] Built target search_hibf_test -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/upgrade_test.dir/link.d CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -o upgrade_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +[ 98%] Built target search_hibf_test +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/options_test.dir/link.d CMakeFiles/options_test.dir/options_test.cpp.o -o options_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_test.dir/link.d CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -o build_ibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_compressed_test.dir/link.d CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o -o build_ibf_compressed_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 97%] Built target upgrade_test -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_test.dir/link.d CMakeFiles/build_ibf_test.dir/build_ibf_test.cpp.o -o build_ibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +[ 98%] Built target options_test +[ 98%] Built target build_ibf_test +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_ibf_compressed_test.dir/link.d CMakeFiles/build_ibf_compressed_test.dir/build_ibf_compressed_test.cpp.o -o build_ibf_compressed_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/upgrade_test.dir/link.d CMakeFiles/upgrade_test.dir/upgrade_test.cpp.o -o upgrade_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_hibf_preprocessing_test.dir/link.d CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -o search_hibf_preprocessing_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 97%] Built target build_ibf_compressed_test -[ 97%] Built target build_ibf_test -[ 97%] Built target search_hibf_preprocessing_test -[ 98%] Linking CXX executable ../../../bin/chopper -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper.dir/link.txt --verbose=1 +[ 98%] Built target build_ibf_compressed_test +[ 98%] Built target upgrade_test /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/build_hibf_test.dir/link.d CMakeFiles/build_hibf_test.dir/build_hibf_test.cpp.o -o build_hibf_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' [ 98%] Built target build_hibf_test -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_preprocessing_test.dir/link.d CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -o search_ibf_preprocessing_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_hibf_preprocessing_test.dir/link.d CMakeFiles/search_hibf_preprocessing_test.dir/search_hibf_preprocessing_test.cpp.o -o search_hibf_preprocessing_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -Wl,-z,relro -Wl,-z,now -Wl,--dependency-file=CMakeFiles/chopper.dir/link.d CMakeFiles/chopper.dir/chopper.cpp.o -o ../../../bin/chopper ../../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a +[ 98%] Built target search_hibf_preprocessing_test +/usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/search_ibf_preprocessing_test.dir/link.d CMakeFiles/search_ibf_preprocessing_test.dir/search_ibf_preprocessing_test.cpp.o -o search_ibf_preprocessing_test ../../lib/libraptor_argument_parsing.a ../../lib/libraptor_build.a ../../lib/libraptor_build_hibf.a ../../lib/libraptor_prepare.a ../../lib/libraptor_search.a ../../lib/libraptor_threshold.a ../../lib/libraptor_upgrade.a ../../lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread ../../lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a -lgtest_main -lgtest make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' -[ 98%] Built target chopper [ 98%] Built target search_ibf_preprocessing_test [100%] Linking CXX executable validate_shape cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/validate_shape.dir/link.txt --verbose=1 @@ -2435,7 +2471,7 @@ #dh_auto_build --arch --builddirectory build_performance #dh_auto_build --arch --builddirectory build_header dh_auto_build --arch --builddirectory build_snippet - cd build_snippet && make -j40 "INSTALL=install --strip-program=true" VERBOSE=1 + cd build_snippet && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet -B/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/CMakeFiles /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet//CMakeFiles/progress.marks @@ -2445,12 +2481,12 @@ make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/depend make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/depend make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/depend +make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade/CMakeFiles/raptor_upgrade.dir/DependInfo.cmake "--color=" -make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/depend +make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/DependInfo.cmake "--color=" -make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/depend make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/DependInfo.cmake "--color=" @@ -2463,106 +2499,106 @@ make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold/CMakeFiles/raptor_threshold.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make -f src/upgrade/CMakeFiles/raptor_upgrade.dir/build.make src/upgrade/CMakeFiles/raptor_upgrade.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build make -f src/prepare/CMakeFiles/raptor_prepare.dir/build.make src/prepare/CMakeFiles/raptor_prepare.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build +make -f _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build.make _deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build +make -f src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build.make src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make -f src/search/CMakeFiles/raptor_search.dir/build.make src/search/CMakeFiles/raptor_search.dir/build +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +make -f src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build.make src/build/hibf/CMakeFiles/raptor_build_hibf.dir/build +make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Nothing to be done for '_deps/raptor_chopper_project-build/CMakeFiles/xxhash_project.dir/build'. make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make -f src/threshold/CMakeFiles/raptor_threshold.dir/build.make src/threshold/CMakeFiles/raptor_threshold.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -[ 3%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -[ 3%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -[ 5%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o -[ 6%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -[ 8%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp +[ 3%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o +[ 6%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o +[ 6%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o +[ 6%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o +[ 8%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o [ 10%] Building CXX object src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -[ 10%] Built target xxhash_project -[ 11%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -[ 15%] Building CXX object src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -[ 15%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -[ 16%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -[ 18%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp -[ 20%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -[ 23%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -[ 23%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -[ 25%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp -[ 27%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp +[ 11%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o +[ 13%] Building CXX object src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/compute_kmers.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/multiple_error_model.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem 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CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/upgrade/CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -MF CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o.d -o CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade/raptor_upgrade.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp -make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend +[ 15%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -MF CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o.d -o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/precompute_correction.cpp +[ 16%] Built target xxhash_project +[ 16%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o +[ 20%] Building CXX object src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o +[ 20%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/prepare && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/prepare/CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -MF CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o.d -o CMakeFiles/raptor_prepare.dir/compute_minimiser.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare/compute_minimiser.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/prepare_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/prepare_parsing.cpp -[ 28%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/raptor_search.cpp.o -MF CMakeFiles/raptor_search.dir/raptor_search.cpp.o.d -o CMakeFiles/raptor_search.dir/raptor_search.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/raptor_search.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/parse_bin_path.cpp +[ 22%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o +[ 23%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o +[ 25%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o +[ 27%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/parse_bin_path.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp +make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/depend +[ 28%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_partitioned_ibf.cpp +[ 30%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_line.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/bin_size_in_bits.cpp -[ 30%] Building CXX object src/search/CMakeFiles/raptor_search.dir/search_partitioned_ibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF 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/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_ibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_ibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_ibf.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/search/CMakeFiles/raptor_search.dir/search_hibf.cpp.o -MF CMakeFiles/raptor_search.dir/search_hibf.cpp.o.d -o CMakeFiles/raptor_search.dir/search_hibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search/search_hibf.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/search_parsing.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/build_parsing.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/build_parsing.cpp +[ 37%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o +[ 37%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o +[ 37%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o +[ 38%] 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/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_error_model.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem 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src/build/hibf/CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -MF CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o.d -o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/one_indirect_error_model.cpp -[ 45%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp [ 47%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o -[ 52%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp +[ 47%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/upgrade_parsing.cpp.o +[ 47%] Building CXX object src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/search_parsing.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/init_shared_meta.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/init_shared_meta.cpp +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp +[ 49%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/argument_parsing/CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -MF CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o.d -o CMakeFiles/raptor_argument_parsing.dir/compute_bin_size.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing/compute_bin_size.cpp +[ 50%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp [ 52%] Building CXX object src/threshold/CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -[ 52%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/threshold/CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -MF CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o.d -o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold/pascal_row.cpp -[ 55%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -[ 55%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/argument_parsing && /usr/bin/c++ -DRAPTOR_DATE=\"Unavailable\" -DRAPTOR_VERSION="\"3.0.1 (commit unavailable)\"" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd 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-I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_parent_kmers.cpp -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem 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CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp +[ 55%] Building CXX object src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build/hibf && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/hibf/CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -MF CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o.d -o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' [ 57%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -MF CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o.d -o CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2575,32 +2611,32 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, - from /usr/include/c++/15/algorithm:62, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13: + from /usr/include/c++/15/vector:64, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ In file included from /usr/include/c++/15/bits/stl_algobase.h:65, - from /usr/include/c++/15/vector:64, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/core.h:45, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:26: + from /usr/include/c++/15/algorithm:62, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/parse_chopper_pack_header.cpp:13: /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2624,9 +2660,21 @@ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ +In file included from /usr/include/simde/x86/mmx.h:30, + from /usr/include/simde/x86/sse.h:33, + from /usr/include/simde/x86/avx.h:28, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/layout/hibf_statistics.hpp:15, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp:9: +/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic] + 610 | # define SIMDE_POLY128_TYPE __int128 + | ^~~~~~~~ +/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’ + 616 | typedef SIMDE_POLY128_TYPE simde_poly128; + | ^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2639,7 +2687,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2652,7 +2700,7 @@ | ^~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/graph_extender.h:30, from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/list_graph.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:13: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:13: /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/lemon/bits/stl_iterators.h:20:31: warning: ‘template struct std::iterator’ is deprecated [-Wdeprecated-declarations] 20 | : public T, public std::iterator { | ^~~~~~~~ @@ -2663,26 +2711,8 @@ /usr/include/c++/15/bits/stl_iterator_base_types.h:129:34: note: declared here 129 | struct _GLIBCXX17_DEPRECATED iterator | ^~~~~~~~ -In file included from /usr/include/simde/x86/mmx.h:30, - from /usr/include/simde/x86/sse.h:33, - from /usr/include/simde/x86/avx.h:28, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/sketch/hyperloglog.hpp:21, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include/chopper/layout/hibf_statistics.hpp:15, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper_layout.cpp:9: -/usr/include/simde/x86/../simde-common.h:610:30: warning: ISO C++ does not support ‘__int128’ for ‘simde_poly128’ [-Wpedantic] - 610 | # define SIMDE_POLY128_TYPE __int128 - | ^~~~~~~~ -/usr/include/simde/x86/../simde-common.h:616:9: note: in expansion of macro ‘SIMDE_POLY128_TYPE’ - 616 | typedef SIMDE_POLY128_TYPE simde_poly128; - | ^~~~~~~~~~~~~~~~~~ -[ 59%] Linking CXX static library ../../lib/libraptor_threshold.a -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake -cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 -/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o -/usr/bin/ranlib ../../lib/libraptor_threshold.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2693,8 +2723,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/update_user_bins.hpp:15, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/update_user_bins.cpp:15: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2705,9 +2735,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -[ 59%] Built target raptor_threshold -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2718,8 +2747,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/hierarchical_build.hpp:18, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/loop_over_children.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2730,8 +2759,15 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16: +[ 59%] Linking CXX static library ../../lib/libraptor_threshold.a +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -P CMakeFiles/raptor_threshold.dir/cmake_clean_target.cmake +cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/threshold && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_threshold.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../lib/libraptor_threshold.a CMakeFiles/raptor_threshold.dir/multiple_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_error_model.cpp.o CMakeFiles/raptor_threshold.dir/one_indirect_error_model.cpp.o CMakeFiles/raptor_threshold.dir/pascal_row.cpp.o CMakeFiles/raptor_threshold.dir/precompute_correction.cpp.o CMakeFiles/raptor_threshold.dir/precompute_threshold.cpp.o +/usr/bin/ranlib ../../lib/libraptor_threshold.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +[ 59%] Built target raptor_threshold +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/chopper_build.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2742,8 +2778,8 @@ /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:28:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/create_ibfs_from_chopper_pack.hpp:16, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/create_ibfs_from_chopper_pack.cpp:15: +In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/read_chopper_pack_file.hpp:17, + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/read_chopper_pack_file.cpp:17: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2755,7 +2791,7 @@ 28 | alignas(std::hardware_destructive_interference_size) std::atomic user_bin_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/construct_ibf.hpp:18, - from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/hierarchical_build.cpp:16: + from /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf/construct_ibf.cpp:16: /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf/build_data.hpp:27:18: warning: use of ‘std::hardware_destructive_interference_size’ [-Winterference-size] 27 | alignas(std::hardware_destructive_interference_size) std::atomic ibf_number{}; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -2779,8 +2815,8 @@ make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make -f src/build/CMakeFiles/raptor_build.dir/build.make src/build/CMakeFiles/raptor_build.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -[ 66%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o [ 66%] Building CXX object src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o +[ 66%] Building CXX object src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o [ 66%] Building CXX object src/build/CMakeFiles/raptor_build.dir/raptor_build.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/build_ibf.cpp.o -MF CMakeFiles/raptor_build.dir/build_ibf.cpp.o.d -o CMakeFiles/raptor_build.dir/build_ibf.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/build_ibf.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/build && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/build/CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -MF CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o.d -o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/max_count_per_partition.cpp @@ -2791,9 +2827,13 @@ [ 69%] Linking CXX static library ../../../lib/libchopper_layout_lib.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -P CMakeFiles/chopper_layout_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/chopper_layout_lib.dir/link.txt --verbose=1 +/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o +/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a +make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' /usr/bin/ar qc ../../../lib/libchopper_layout_lib.a CMakeFiles/chopper_layout_lib.dir/chopper_layout.cpp.o /usr/bin/ranlib ../../../lib/libchopper_layout_lib.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +[ 69%] Built target raptor_build_hibf [ 69%] Built target chopper_layout_lib make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/depend make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/depend @@ -2802,19 +2842,15 @@ make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make -f src/layout/CMakeFiles/raptor_layout.dir/build.make src/layout/CMakeFiles/raptor_layout.dir/build -make -f _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build.make _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' [ 72%] Building CXX object _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o [ 72%] Building CXX object src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/layout && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT src/layout/CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -MF CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o.d -o CMakeFiles/raptor_layout.dir/raptor_layout.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout/raptor_layout.cpp cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/src && /usr/bin/c++ -DSHARG_HAS_BZIP2=1 -DSHARG_HAS_ZLIB=1 -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -std=gnu++23 -pedantic -Wall -Wextra -MD -MT _deps/raptor_chopper_project-build/src/CMakeFiles/chopper.dir/chopper.cpp.o -MF CMakeFiles/chopper.dir/chopper.cpp.o.d -o CMakeFiles/chopper.dir/chopper.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/chopper.cpp -/usr/bin/ar qc ../../../lib/libraptor_build_hibf.a CMakeFiles/raptor_build_hibf.dir/bin_size_in_bits.cpp.o CMakeFiles/raptor_build_hibf.dir/chopper_build.cpp.o CMakeFiles/raptor_build_hibf.dir/compute_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/construct_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/create_ibfs_from_chopper_pack.cpp.o CMakeFiles/raptor_build_hibf.dir/hierarchical_build.cpp.o CMakeFiles/raptor_build_hibf.dir/insert_into_ibf.cpp.o CMakeFiles/raptor_build_hibf.dir/loop_over_children.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_header.cpp.o CMakeFiles/raptor_build_hibf.dir/parse_chopper_pack_line.cpp.o CMakeFiles/raptor_build_hibf.dir/read_chopper_pack_file.cpp.o CMakeFiles/raptor_build_hibf.dir/update_parent_kmers.cpp.o CMakeFiles/raptor_build_hibf.dir/update_user_bins.cpp.o -/usr/bin/ranlib ../../../lib/libraptor_build_hibf.a -make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -[ 72%] Built target raptor_build_hibf [ 74%] Linking CXX static library ../../lib/libraptor_search.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/cmake -P CMakeFiles/raptor_search.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/search && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_search.dir/link.txt --verbose=1 @@ -2841,10 +2877,10 @@ /usr/bin/ar qc ../../lib/libraptor_build.a CMakeFiles/raptor_build.dir/build_ibf.cpp.o CMakeFiles/raptor_build.dir/max_count_per_partition.cpp.o CMakeFiles/raptor_build.dir/raptor_build.cpp.o /usr/bin/ranlib ../../lib/libraptor_build.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -[ 76%] Built target raptor_build [ 77%] Linking CXX static library ../../lib/libraptor_upgrade.a cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/cmake -P CMakeFiles/raptor_upgrade.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/upgrade && /usr/bin/cmake -E cmake_link_script CMakeFiles/raptor_upgrade.dir/link.txt --verbose=1 +[ 77%] Built target raptor_build /usr/bin/ar qc ../../lib/libraptor_upgrade.a CMakeFiles/raptor_upgrade.dir/raptor_upgrade.cpp.o /usr/bin/ranlib ../../lib/libraptor_upgrade.a make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' @@ -2866,19 +2902,19 @@ make -f CMakeFiles/snippet_main.dir/build.make CMakeFiles/snippet_main.dir/depend make -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/CMakeFiles/snippet_main.dir/DependInfo.cmake "--color=" +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' cd /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/src/CMakeFiles/raptor.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -make -f CMakeFiles/snippet_main.dir/build.make CMakeFiles/snippet_main.dir/build -make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[4]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +make -f CMakeFiles/snippet_main.dir/build.make CMakeFiles/snippet_main.dir/build make -f src/CMakeFiles/raptor.dir/build.make src/CMakeFiles/raptor.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' -[ 83%] Building CXX object CMakeFiles/snippet_main.dir/snippet_main.cpp.o +make[4]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' +[ 84%] Building CXX object CMakeFiles/snippet_main.dir/snippet_main.cpp.o [ 84%] Building CXX object 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/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP 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-I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/src/../include -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/simde/simde -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/test/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/robin-hood-hashing/src/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/chopper/include -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/lib/tool_description_lib/src -isystem /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/_deps/raptor_chopper_project-build/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -std=gnu++23 -pedantic -Wall -Wextra -Werror -Wno-interference-size -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -MD -MT CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -MF CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o.d -o CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -c /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp [ 93%] Linking CXX executable snippet_main_snippet /usr/bin/cmake -E cmake_link_script CMakeFiles/snippet_main_snippet.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-raptor-3.0.1+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/seqan3/submodules/sdsl-lite/include/ -I/usr/include/simde -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/sharg-parser/include/ -I/build/reproducible-path/seqan-raptor-3.0.1+ds/lib/submodules/lemon/include/ -Wl,-z,relro -Wl,-z,now -fopenmp -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -mpopcnt -flto=auto -fno-fat-lto-objects -Wl,--dependency-file=CMakeFiles/snippet_main_snippet.dir/link.d CMakeFiles/snippet_main_snippet.dir/snippet_main.cpp.o -o snippet_main_snippet libsnippet_main.a -lgtest_main -lgtest lib/libraptor_argument_parsing.a lib/libraptor_build.a lib/libraptor_build_hibf.a lib/libraptor_prepare.a lib/libraptor_search.a lib/libraptor_threshold.a lib/libraptor_upgrade.a lib/libraptor_layout.a /usr/lib/x86_64-linux-gnu/libxxhash.so -lpthread lib/libchopper_layout_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so /usr/lib/x86_64-linux-gnu/librt.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/x86_64-linux-gnu/libyaml-cpp.so.0.8.0 /usr/lib/x86_64-linux-gnu/libxxhash.a @@ -2942,7 +2978,7 @@ debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_build --indep --builddirectory doc_build - cd doc_build && make -j40 "INSTALL=install --strip-program=true" VERBOSE=1 + cd doc_build && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/documentation -B/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/CMakeFiles /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build//CMakeFiles/progress.marks @@ -2999,14 +3035,14 @@ Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf Searching for images... Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/figures Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/setup Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/setup/quickstart_cmake Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/01_introduction +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/02_layout Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/04_search +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/01_introduction Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/03_index -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/02_layout -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/figures Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/test/documentation Searching for dot files... Searching for msc files... @@ -3015,32 +3051,32 @@ Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/search -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/upgrade +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/argument_parsing Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/build/hibf -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/argument_parsing Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/threshold -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/prepare Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/layout +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/search +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/upgrade +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/include/raptor/prepare Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/build/hibf -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/argument_parsing Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/threshold -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/layout +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/search +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/upgrade +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/src/prepare Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/figures Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/setup Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/setup/quickstart_cmake Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/01_introduction +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/02_layout Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/04_search +Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/01_introduction Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/03_index -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/tutorial/02_layout -Searching for files in directory /build/reproducible-path/seqan-raptor-3.0.1+ds/doc/figures Reading and parsing tag files Reading tag file '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/cppreference-doxygen-web.tag.xml', location 'https://en.cppreference.com/w/'... Parsing files @@ -3476,6 +3512,15 @@ Generating code for file version.hpp... Parsing code for file LICENSE.md... Parsing code for file build_parsing.cpp... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... +Parsing code for file CMakeLists.txt... Parsing code for file compute_bin_size.cpp... Parsing code for file init_shared_meta.cpp... Parsing code for file parse_bin_path.cpp... @@ -3501,15 +3546,6 @@ Parsing code for file raptor_layout.cpp... Parsing code for file compute_minimiser.cpp... Parsing code for file raptor.cpp... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... -Parsing code for file CMakeLists.txt... Parsing code for file raptor_search.cpp... Parsing code for file search_hibf.cpp... Parsing code for file search_ibf.cpp... @@ -3772,10 +3808,10 @@ debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_test --arch --builddirectory build_unit - cd build_unit && make -j40 test ARGS\+=--verbose ARGS\+=-j40 + cd build_unit && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j40 +/usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit/DartConfiguration.tcl Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit @@ -3922,7 +3958,7 @@ 4: [----------] Global test environment set-up. 4: [----------] 3 tests from argparse_main 4: [ RUN ] argparse_main.no_options -4: [ OK ] argparse_main.no_options (6 ms) +4: [ OK ] argparse_main.no_options (4 ms) 4: [ RUN ] argparse_main.no_subparser 4: [ OK ] argparse_main.no_subparser (4 ms) 4: [ RUN ] argparse_main.unknown_option @@ -3941,8 +3977,8 @@ 7: [----------] Global test environment set-up. 7: [----------] 1 test from build_ibf_compressed 7: [ RUN ] build_ibf_compressed.wrong_compression -7: [ OK ] build_ibf_compressed.wrong_compression (2 ms) -7: [----------] 1 test from build_ibf_compressed (2 ms total) +7: [ OK ] build_ibf_compressed.wrong_compression (0 ms) +7: [----------] 1 test from build_ibf_compressed (0 ms total) 7: 7: [----------] 24 tests from build_ibf_compressed_suite/build_ibf_compressed 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error @@ -3979,749 +4015,749 @@ 1/14 Test #1: api/issue_142 ............................... Passed 0.02 sec 2/14 Test #2: api/memory_usage ............................ Passed 0.02 sec 3/14 Test #3: api/validate_shape .......................... Passed 0.02 sec +4: [ OK ] argparse_main.unknown_option (4 ms) +4: [----------] 3 tests from argparse_main (13 ms total) +4: +4: [----------] 20 tests from argparse_build +4: [ RUN ] argparse_build.no_options 14: Running main() from ./googletest/src/gtest_main.cc 14: [==========] Running 6 tests from 1 test suite. 14: [----------] Global test environment set-up. 14: [----------] 6 tests from upgrade 14: [ RUN ] upgrade.via_fpr -4: [ OK ] argparse_main.unknown_option (5 ms) -4: [----------] 3 tests from argparse_main (16 ms total) -4: -4: [----------] 20 tests from argparse_build -4: [ RUN ] argparse_build.no_options -10: [ OK ] search_hibf.three_levels (9 ms) -10: [----------] 1 test from search_hibf (9 ms total) +10: [ OK ] search_hibf.three_levels (8 ms) +10: [----------] 1 test from search_hibf (8 ms total) 10: 10: [----------] 36 tests from search_hibf_suite/search_hibf 10: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error (17 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error -4: [ OK ] argparse_build.no_options (7 ms) +4: [ OK ] argparse_build.no_options (4 ms) 4: [ RUN ] argparse_build.input_missing -14: [ OK ] upgrade.via_fpr (8 ms) +14: [ OK ] upgrade.via_fpr (4 ms) 14: [ RUN ] upgrade.via_bin_path -4: [ OK ] argparse_build.input_missing (6 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel0_error (15 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error +4: [ OK ] argparse_build.input_missing (4 ms) 4: [ RUN ] argparse_build.input_invalid -10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error (12 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_0_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error -9: [ OK ] build_ibf.verbose (23 ms) -9: [----------] 1 test from build_ibf (23 ms total) +9: [ OK ] build_ibf.verbose (19 ms) +9: [----------] 1 test from build_ibf (19 ms total) 9: 9: [----------] 24 tests from build_ibf_suite/build_ibf 9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel 4: [ OK ] argparse_build.input_invalid (4 ms) 4: [ RUN ] argparse_build.output_missing -12: [ OK ] search_ibf_preprocessing.pipeline_compressed_index (23 ms) -12: [----------] 1 test from search_ibf_preprocessing (23 ms total) +12: [ OK ] search_ibf_preprocessing.pipeline_compressed_index (16 ms) +12: [----------] 1 test from search_ibf_preprocessing (16 ms total) 12: 12: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error -10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error (11 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_19_window_1_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error -14: [ OK ] upgrade.via_bin_path (17 ms) -14: [ RUN ] upgrade.via_bin_file -4: [ OK ] argparse_build.output_missing (6 ms) +4: [ OK ] argparse_build.output_missing (5 ms) 4: [ RUN ] argparse_build.kmer_window -9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel (11 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error (20 ms) +14: [ OK ] upgrade.via_bin_path (13 ms) +14: [ RUN ] upgrade.via_bin_file +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_parallel1_error (13 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error -6: [ OK ] build_hibf.three_levels (43 ms) -6: [ RUN ] build_hibf.verbose -4: [ OK ] argparse_build.kmer_window (7 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_parallel (7 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial +4: [ OK ] argparse_build.kmer_window (4 ms) 4: [ RUN ] argparse_build.kmer_shape -9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial (10 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel -13: [ OK ] search_ibf.cache_thresholds (43 ms) +6: [ OK ] build_hibf.three_levels (34 ms) +6: [ RUN ] build_hibf.verbose +13: [ OK ] search_ibf.cache_thresholds (28 ms) 13: [ RUN ] search_ibf.verbose -4: [ OK ] argparse_build.kmer_shape (8 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_19_window_serial (7 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel +4: [ OK ] argparse_build.kmer_shape (4 ms) 4: [ RUN ] argparse_build.zero_threads -14: [ OK ] upgrade.via_bin_file (16 ms) +14: [ OK ] upgrade.via_bin_file (13 ms) 14: [ RUN ] upgrade.compressed -5: [ OK ] build_hibf_layout.pipeline (59 ms) -5: [----------] 1 test from build_hibf_layout (59 ms total) -5: -5: [----------] Global test environment tear-down -5: [==========] 1 test from 1 test suite ran. (59 ms total) -5: [ PASSED ] 1 test. - 4/14 Test #5: cli/build/build_hibf_chopper_test ........... Passed 0.06 sec -4: [ OK ] argparse_build.zero_threads (6 ms) +4: [ OK ] argparse_build.zero_threads (4 ms) 4: [ RUN ] argparse_build.no_bins_in_file -9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel (11 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial -14: [ OK ] upgrade.compressed (5 ms) -14: [ RUN ] upgrade.partitioned_ibf_via_fpr -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (30 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (19 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error -10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error (24 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error -13: [ OK ] search_ibf.verbose (9 ms) -13: [----------] 2 tests from search_ibf (52 ms total) +13: [ OK ] search_ibf.verbose (7 ms) +13: [----------] 2 tests from search_ibf (35 ms total) 13: 13: [----------] 36 tests from search_ibf_suite/search_ibf 13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error (22 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial0_error (14 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error -4: [ OK ] argparse_build.no_bins_in_file (4 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_parallel (7 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial +14: [ OK ] upgrade.compressed (5 ms) +14: [ RUN ] upgrade.partitioned_ibf_via_fpr +10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_0_error (19 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error +4: [ OK ] argparse_build.no_bins_in_file (5 ms) 4: [ RUN ] argparse_build.corrupted_input +5: [ OK ] build_hibf_layout.pipeline (51 ms) +5: [----------] 1 test from build_hibf_layout (51 ms total) +5: +5: [----------] Global test environment tear-down +5: [==========] 1 test from 1 test suite ran. (51 ms total) +5: [ PASSED ] 1 test. + 4/14 Test #5: cli/build/build_hibf_chopper_test ........... Passed 0.06 sec +8: [ OK ] build_ibf_partitioned.pipeline_misc (48 ms) +8: [----------] 1 test from build_ibf_partitioned (48 ms total) +8: +8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed +13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error 9: [ OK ] build_ibf_suite/build_ibf.with_file/1_bins_23_window_serial (7 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel 4: [ OK ] argparse_build.corrupted_input (4 ms) 4: [ RUN ] argparse_build.empty_file_in_bin -13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_0_error (10 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error -8: [ OK ] build_ibf_partitioned.pipeline_misc (71 ms) -8: [----------] 1 test from build_ibf_partitioned (71 ms total) -8: -8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed -4: [ OK ] argparse_build.empty_file_in_bin (5 ms) +11: [ OK ] search_hibf_preprocessing.pipeline_with_continuation (48 ms) +11: [----------] 1 test from search_hibf_preprocessing (48 ms total) +11: +11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error +4: [ OK ] argparse_build.empty_file_in_bin (4 ms) 4: [ RUN ] argparse_build.mixed_input -14: [ OK ] upgrade.partitioned_ibf_via_fpr (18 ms) +13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error (14 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error +14: [ OK ] upgrade.partitioned_ibf_via_fpr (12 ms) 14: [ RUN ] upgrade.partitioned_ibf_via_bin_path -4: [ OK ] argparse_build.mixed_input (5 ms) +4: [ OK ] argparse_build.mixed_input (4 ms) 4: [ RUN ] argparse_build.wrong_parts -13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_19_window_1_error (8 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (19 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (18 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_19_window_serial1_error (18 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error -6: [ OK ] build_hibf.verbose (40 ms) -6: [----------] 2 tests from build_hibf (84 ms total) +4: [ OK ] argparse_build.wrong_parts (4 ms) +4: [ RUN ] argparse_build.partitioned_parts +6: [ OK ] build_hibf.verbose (33 ms) +6: [----------] 2 tests from build_hibf (68 ms total) 6: 6: [----------] 24 tests from build_hibf_suite/build_hibf 6: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel -10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error (24 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/1_bins_23_window_1_error (20 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error -11: [ OK ] search_hibf_preprocessing.pipeline_with_continuation (79 ms) -11: [----------] 1 test from search_hibf_preprocessing (79 ms total) -11: -11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error -4: [ OK ] argparse_build.wrong_parts (7 ms) -4: [ RUN ] argparse_build.partitioned_parts -9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel (20 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_parallel (19 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial -4: [ OK ] argparse_build.partitioned_parts (5 ms) +4: [ OK ] argparse_build.partitioned_parts (4 ms) 4: [ RUN ] argparse_build.minimiser_and_shape -6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel (10 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (18 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_parallel (6 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial -10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error (9 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_0_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error 4: [ OK ] argparse_build.minimiser_and_shape (4 ms) 4: [ RUN ] argparse_build.minimiser_and_kmer -6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial (6 ms) +13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error (19 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_19_window_serial (5 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel -4: [ OK ] argparse_build.minimiser_and_kmer (4 ms) -4: [ RUN ] argparse_build.minimiser_and_window -14: [ OK ] upgrade.partitioned_ibf_via_bin_path (23 ms) -14: [----------] 6 tests from upgrade (90 ms total) +14: [ OK ] upgrade.partitioned_ibf_via_bin_path (20 ms) +14: [----------] 6 tests from upgrade (69 ms total) 14: 14: [----------] Global test environment tear-down -14: [==========] 6 tests from 1 test suite ran. (90 ms total) +14: [==========] 6 tests from 1 test suite ran. (69 ms total) 14: [ PASSED ] 6 tests. - 5/14 Test #14: cli/upgrade/upgrade_test .................... Passed 0.09 sec -10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error (8 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_0_error (23 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error (23 ms) + 5/14 Test #14: cli/upgrade/upgrade_test .................... Passed 0.07 sec +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial0_error (18 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error +4: [ OK ] argparse_build.minimiser_and_kmer (4 ms) +4: [ RUN ] argparse_build.minimiser_and_window +10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_19_window_1_error (7 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel (5 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial 4: [ OK ] argparse_build.minimiser_and_window (4 ms) 4: [ RUN ] argparse_build.layout_config_and_options -6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_parallel (6 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel0_error (20 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error -6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial (5 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel -9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial (23 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error (31 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel0_error (27 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error -4: [ OK ] argparse_build.layout_config_and_options (12 ms) -4: [ RUN ] argparse_build.layout_too_small_window +9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_19_window_serial (19 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel 11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_parallel1_error (17 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/1_bins_23_window_serial (5 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel +13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error (21 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error +4: [ OK ] argparse_build.layout_config_and_options (13 ms) +4: [ RUN ] argparse_build.layout_too_small_window 12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_19_window_serial1_error (19 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error -6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel (14 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial -4: [ OK ] argparse_build.layout_too_small_window (7 ms) -4: [ RUN ] argparse_build.layout_config_missing -10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error (24 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_0_error (20 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed (55 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partscompressed (52 ms) 8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed -13: [ OK ] search_ibf_suite/search_ibf.with_error/1_bins_23_window_1_error (25 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error +4: [ OK ] argparse_build.layout_too_small_window (5 ms) +4: [ RUN ] argparse_build.layout_config_missing +6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_parallel (13 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial +13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error (17 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error +9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel (18 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial 4: [ OK ] argparse_build.layout_config_missing (5 ms) 4: [ RUN ] argparse_build.layout_config_missing_preprocessed -9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_parallel (23 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial -13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_0_error (9 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error -6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial (14 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel -4: [ OK ] argparse_build.layout_config_missing_preprocessed (10 ms) -4: [----------] 20 tests from argparse_build (129 ms total) +13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error (27 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error +4: [ OK ] argparse_build.layout_config_missing_preprocessed (5 ms) +4: [----------] 20 tests from argparse_build (105 ms total) 4: 4: [----------] 13 tests from argparse_search 4: [ RUN ] argparse_search.no_options -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_parallel1_error (31 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error -4: [ OK ] argparse_search.no_options (3 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_19_window_serial (12 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel +4: [ OK ] argparse_search.no_options (4 ms) 4: [ RUN ] argparse_search.ibf_missing -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial0_error (23 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_19_window_1_error (8 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error -4: [ OK ] argparse_search.ibf_missing (7 ms) -4: [ RUN ] argparse_search.ibf_wrong -10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error (24 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/64_bins_23_window_1_error (20 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error -6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel (13 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial -9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial (21 ms) +4: [ OK ] argparse_search.ibf_missing (4 ms) +4: [ RUN ] argparse_search.ibf_wrong +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error (17 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error +9: [ OK ] build_ibf_suite/build_ibf.with_file/64_bins_23_window_serial (19 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel 4: [ OK ] argparse_search.ibf_wrong (4 ms) 4: [ RUN ] argparse_search.query_missing +6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_parallel (13 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial 10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_0_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (31 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error +13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error (20 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error 4: [ OK ] argparse_search.query_missing (4 ms) 4: [ RUN ] argparse_search.query_wrong -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (36 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error -4: [ OK ] argparse_search.query_wrong (5 ms) -4: [ RUN ] argparse_search.output_missing -6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial (15 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_19_window_serial1_error (22 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error -10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error (10 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_19_window_1_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error +4: [ OK ] argparse_search.query_wrong (4 ms) +4: [ RUN ] argparse_search.output_missing +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error (27 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error 4: [ OK ] argparse_search.output_missing (4 ms) 4: [ RUN ] argparse_search.old_index -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial0_error (28 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_0_error (27 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error -4: [ OK ] argparse_search.old_index (10 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_file/64_bins_23_window_serial (13 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel +4: [ OK ] argparse_search.old_index (5 ms) 4: [ RUN ] argparse_search.ambiguous_index -9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel (25 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_parallel (23 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed (54 ms) +13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error (20 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error2_partsuncompressed (50 ms) 8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed -4: [ OK ] argparse_search.ambiguous_index (5 ms) +4: [ OK ] argparse_search.ambiguous_index (4 ms) 4: [ RUN ] argparse_search.error_treshold +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (31 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error 4: [ OK ] argparse_search.error_treshold (4 ms) 4: [ RUN ] argparse_search.empty_query -6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel (22 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial -10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error (21 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_0_error (20 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error -4: [ OK ] argparse_search.empty_query (6 ms) +13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error +4: [ OK ] argparse_search.empty_query (4 ms) 4: [ RUN ] argparse_search.queries_too_short -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (39 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (32 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/64_bins_23_window_1_error (26 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel0_error (35 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error -4: [ OK ] argparse_search.queries_too_short (7 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_parallel (20 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial +13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error +4: [ OK ] argparse_search.queries_too_short (5 ms) 4: [ RUN ] argparse_search.queries_have_variance -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error (33 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/1_bins_23_window_serial1_error (26 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_0_error (8 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error -9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial (32 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel -10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error (22 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_error/128_bins_23_window_1_error (20 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_19_window_1_error (9 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error (8 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_19_window_serial (31 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_0_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error -4: [ OK ] argparse_search.queries_have_variance (23 ms) +13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error (20 ms) +13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (30 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error +4: [ OK ] argparse_search.queries_have_variance (20 ms) 4: [ RUN ] argparse_search.queries_unsupported_length -6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial (37 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error (6 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_19_window_serial (28 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error (40 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial0_error (31 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error -9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel (27 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial -4: [ OK ] argparse_search.queries_unsupported_length (13 ms) -4: [----------] 13 tests from argparse_search (101 ms total) +4: [ OK ] argparse_search.queries_unsupported_length (6 ms) +4: [----------] 13 tests from argparse_search (80 ms total) 4: 4: [----------] 3 tests from argparse_upgrade 4: [ RUN ] argparse_upgrade.exclusive_options -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_19_window_1_error (20 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error (36 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel0_error (28 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_parallel1_error (130 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error -13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_0_error (116 ms) -13: [ RUN ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error -4: [ OK ] argparse_upgrade.exclusive_options (94 ms) -4: [ RUN ] argparse_upgrade.ambiguous_index -6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel (107 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error (95 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_0_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error +4: [ OK ] argparse_upgrade.exclusive_options (4 ms) +4: [ RUN ] argparse_upgrade.ambiguous_index 4: [ OK ] argparse_upgrade.ambiguous_index (4 ms) 4: [ RUN ] argparse_upgrade.unsupported_index -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed (161 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed +9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_parallel (22 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial +13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error (20 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error (7 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error 4: [ OK ] argparse_upgrade.unsupported_index (4 ms) -4: [----------] 3 tests from argparse_upgrade (102 ms total) +4: [----------] 3 tests from argparse_upgrade (13 ms total) 4: 4: [----------] 2 tests from argparse_prepare 4: [ RUN ] argparse_prepare.no_options -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/1_bins_23_window_1_error (6 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_parallel (18 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial 4: [ OK ] argparse_prepare.no_options (4 ms) 4: [ RUN ] argparse_prepare.cutoffs -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error (6 ms) +13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_0_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error 4: [ OK ] argparse_prepare.cutoffs (4 ms) -4: [----------] 2 tests from argparse_prepare (8 ms total) +4: [----------] 2 tests from argparse_prepare (9 ms total) 4: 4: [----------] Global test environment tear-down -4: [==========] 41 tests from 5 test suites ran. (358 ms total) +4: [==========] 41 tests from 5 test suites ran. (222 ms total) 4: [ PASSED ] 41 tests. - 6/14 Test #4: cli/argument_parsing/options_test ........... Passed 0.36 sec -13: [ OK ] search_ibf_suite/search_ibf.with_error/128_bins_23_window_1_error (20 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error + 6/14 Test #4: cli/argument_parsing/options_test ........... Passed 0.23 sec +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error (31 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error +13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error 10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_19_window_1_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error (116 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_parallel1_error (28 ms) 7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error -6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial (24 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel -9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial (119 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_0_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error (123 ms) +13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/1_bins_23_window_serial1_error (34 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error 10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_0_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partscompressed (77 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed +13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error (6 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error +6: [ OK ] build_hibf_suite/build_hibf.with_file/128_bins_23_window_serial (24 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel +9: [ OK ] build_ibf_suite/build_ibf.with_file/128_bins_23_window_serial (31 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel +13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error 6: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_parallel (5 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial0_error (30 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel (6 ms) +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error (7 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_parallel (7 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial -13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_19_window_1_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error 6: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_19_window_serial (5 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/64_bins_23_window_1_error (6 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial (6 ms) +13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error (30 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error (7 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (22 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error (26 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_19_window_serial (7 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_0_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error 6: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_parallel (5 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_0_error (7 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error -13: [ OK ] search_ibf_suite/search_ibf.threshold/1_bins_23_window_1_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error +13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error +10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error (7 ms) +10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error 6: [ OK ] build_hibf_suite/build_hibf.with_shape/1_bins_23_window_serial (5 ms) 6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel 9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_parallel (7 ms) 9: [ RUN ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial0_error (26 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_19_window_1_error (6 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (22 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error -13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_0_error (5 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial (6 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel -10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_0_error (7 ms) -10: [ RUN ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error -13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_19_window_1_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel (12 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/1_bins_23_window_serial1_error (29 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error +13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error 10: [ OK ] search_hibf_suite/search_hibf.with_threshold/128_bins_23_window_1_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_0_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/1_bins_23_window_serial (7 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel +13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error (7 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error 10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_0_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial (13 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel -9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel (18 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial -13: [ OK ] search_ibf_suite/search_ibf.threshold/64_bins_23_window_1_error (7 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (22 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_parallel (12 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (22 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (23 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error (26 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed (69 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed +13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error 10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_19_window_1_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_0_error (6 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel (15 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial -9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial (20 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_19_window_1_error (14 ms) -13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel0_error (33 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial (14 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error (10 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_19_window_serial1_error (27 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error +13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_0_error (7 ms) 13: [ RUN ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error (31 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error (39 ms) -10: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel (24 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial -13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error (19 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_19_window_serial (12 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel +9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_parallel (19 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial +13: [ OK ] search_ibf_suite/search_ibf.threshold/128_bins_23_window_1_error (6 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error (8 ms) -13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error (60 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel (36 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (44 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_parallel1_error (22 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial (21 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error (10 ms) +13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_0_error (6 ms) +13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error +6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_parallel (12 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial +10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_0_error (19 ms) +10: [ RUN ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial0_error (23 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error4_partsuncompressed (72 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed +13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_19_window_1_error (6 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error (38 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error (29 ms) +9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_19_window_serial (18 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel +6: [ OK ] build_hibf_suite/build_hibf.with_shape/64_bins_23_window_serial (12 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error (22 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error +10: [ OK ] search_hibf_suite/search_hibf.no_hits/1_bins_23_window_1_error (19 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error (8 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel0_error (39 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_19_window_serial1_error (23 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_parallel (18 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial +13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error (19 ms) +13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error +10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_0_error (7 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error (10 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_parallel (21 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial +10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_19_window_1_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel (26 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial0_error (30 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_0_error (27 ms) -13: [ RUN ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial (32 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error (53 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (48 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error (25 ms) -10: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel (21 ms) -6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial -13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error (24 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error (22 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/64_bins_23_window_serial (19 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel +13: [ OK ] search_ibf_suite/search_ibf.no_hits/1_bins_23_window_1_error (20 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial (33 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel -13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error (7 ms) +13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_0_error (6 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error (22 ms) -10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error (23 ms) +10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_0_error (20 ms) +10: [ RUN ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (36 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_parallel1_error (39 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error +13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_19_window_1_error (7 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error -6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial (33 ms) -6: [----------] 24 tests from build_hibf_suite/build_hibf (480 ms total) -6: -6: [----------] Global test environment tear-down -6: [==========] 26 tests from 2 test suites ran. (564 ms total) -6: [ PASSED ] 26 tests. - 7/14 Test #6: cli/build/build_hibf_test ................... Passed 0.57 sec -10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error (12 ms) +6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_19_window_serial (28 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel +9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_parallel (23 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial +10: [ OK ] search_hibf_suite/search_hibf.no_hits/64_bins_23_window_1_error (20 ms) +10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (34 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error +13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error (19 ms) +13: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error +6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_parallel (19 ms) +6: [ RUN ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial +10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_0_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed (149 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_19_window_serial1_error (57 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel (30 ms) -9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial -10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error (7 ms) +10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_19_window_1_error (6 ms) 10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error (52 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_0_error (20 ms) -13: [ RUN ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (59 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (35 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error (22 ms) -10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error -9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial (29 ms) -9: [----------] 24 tests from build_ibf_suite/build_ibf (569 ms total) -9: -9: [----------] Global test environment tear-down -9: [==========] 25 tests from 2 test suites ran. (592 ms total) -9: [ PASSED ] 25 tests. - 8/14 Test #9: cli/build/build_ibf_test .................... Passed 0.60 sec +9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_19_window_serial (31 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel 13: [ OK ] search_ibf_suite/search_ibf.no_hits/64_bins_23_window_1_error (20 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel0_error (39 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error (6 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial0_error (41 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error +6: [ OK ] build_hibf_suite/build_hibf.with_shape/128_bins_23_window_serial (23 ms) +6: [----------] 24 tests from build_hibf_suite/build_hibf (335 ms total) +6: +6: [----------] Global test environment tear-down +6: [==========] 26 tests from 2 test suites ran. (403 ms total) +6: [ PASSED ] 26 tests. + 7/14 Test #6: cli/build/build_hibf_test ................... Passed 0.41 sec +13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_0_error (7 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error (57 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error (66 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error (36 ms) +10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_0_error (20 ms) +10: [ RUN ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (34 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error +13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_19_window_1_error (7 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error -10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error (51 ms) -10: [----------] 36 tests from search_hibf_suite/search_hibf (631 ms total) +9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_parallel (22 ms) +9: [ RUN ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial +10: [ OK ] search_hibf_suite/search_hibf.no_hits/128_bins_23_window_1_error (20 ms) +10: [----------] 36 tests from search_hibf_suite/search_hibf (415 ms total) 10: 10: [----------] Global test environment tear-down -10: [==========] 37 tests from 2 test suites ran. (641 ms total) +10: [==========] 37 tests from 2 test suites ran. (423 ms total) 10: [ PASSED ] 37 tests. - 9/14 Test #10: cli/search/search_hibf_test ................. Passed 0.64 sec -13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error (26 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial0_error (34 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error + 8/14 Test #10: cli/search/search_hibf_test ................. Passed 0.43 sec +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partscompressed (125 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed +13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_0_error (20 ms) 13: [ RUN ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_parallel1_error (74 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error (37 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error -13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error (23 ms) -13: [----------] 36 tests from search_ibf_suite/search_ibf (633 ms total) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/64_bins_23_window_serial1_error (38 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error (34 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error +9: [ OK ] build_ibf_suite/build_ibf.with_shape/128_bins_23_window_serial (29 ms) +9: [----------] 24 tests from build_ibf_suite/build_ibf (428 ms total) +9: +9: [----------] Global test environment tear-down +9: [==========] 25 tests from 2 test suites ran. (448 ms total) +9: [ PASSED ] 25 tests. + 9/14 Test #9: cli/build/build_ibf_test .................... Passed 0.45 sec +13: [ OK ] search_ibf_suite/search_ibf.no_hits/128_bins_23_window_1_error (20 ms) +13: [----------] 36 tests from search_ibf_suite/search_ibf (410 ms total) 13: 13: [----------] Global test environment tear-down -13: [==========] 38 tests from 2 test suites ran. (686 ms total) +13: [==========] 38 tests from 2 test suites ran. (445 ms total) 13: [ PASSED ] 38 tests. -10/14 Test #13: cli/search/search_ibf_test .................. Passed 0.69 sec -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error (51 ms) +10/14 Test #13: cli/search/search_ibf_test .................. Passed 0.45 sec +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/64_bins_23_window_serial1_error (35 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error (37 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial0_error (42 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed (158 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (42 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error (48 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error (54 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel0_error (31 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/64_bins_23_window_serial1_error (35 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (37 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed (56 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error (42 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (63 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (27 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_parallel1_error (31 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel0_error (30 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error (61 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (25 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (28 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial0_error (40 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial0_error (25 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed (79 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error (50 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error (54 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_0_error8_partsuncompressed (116 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_19_window_serial1_error (27 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_parallel1_error (65 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error (58 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed (81 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (59 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error (56 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial0_error (32 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error (66 ms) -7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error (67 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_19_window_serial1_error (39 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partscompressed (49 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_19_window_serial1_error (32 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed (88 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (81 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (37 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel0_error (40 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (37 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error2_partsuncompressed (47 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (37 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error -7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error (55 ms) -7: [----------] 24 tests from build_ibf_compressed_suite/build_ibf_compressed (1040 ms total) -7: -7: [----------] Global test environment tear-down -7: [==========] 25 tests from 2 test suites ran. (1043 ms total) -7: [ PASSED ] 25 tests. -11/14 Test #7: cli/build/build_ibf_compressed_test ......... Passed 1.05 sec -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error (80 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_parallel1_error (40 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (38 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial0_error (38 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel0_error (141 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error (148 ms) +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial0_error (49 ms) +7: [ RUN ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partscompressed (70 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error (38 ms) +11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline/128_bins_23_window_serial1_error (38 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_parallel1_error (125 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed (269 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error (69 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel0_error (18 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error (35 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial0_error (92 ms) -11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error (49 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error (63 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline/128_bins_23_window_serial1_error (39 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error (39 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed (168 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error (26 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_parallel1_error (18 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error +7: [ OK ] build_ibf_compressed_suite/build_ibf_compressed.pipeline/128_bins_23_window_serial1_error (50 ms) +7: [----------] 24 tests from build_ibf_compressed_suite/build_ibf_compressed (761 ms total) +7: +7: [----------] Global test environment tear-down +7: [==========] 25 tests from 2 test suites ran. (761 ms total) +7: [ PASSED ] 25 tests. +11/14 Test #7: cli/build/build_ibf_compressed_test ......... Passed 0.76 sec +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel0_error (17 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error (46 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error (32 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial0_error (19 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error4_partsuncompressed (70 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_parallel1_error (17 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error (19 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_19_window_serial1_error (18 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial0_error (17 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed (69 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error (36 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error (23 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_19_window_serial1_error (16 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error (33 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error (41 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel0_error (31 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel0_error (29 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed (79 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error (131 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error (114 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_parallel1_error (32 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_parallel1_error (30 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error (94 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial0_error (32 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partscompressed (114 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial0_error (30 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error (100 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed (207 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error (45 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/1_bins_23_window_serial1_error (31 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/1_bins_23_window_serial1_error (30 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error (46 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed (354 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error (332 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel0_error (29 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel0_error (22 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error (394 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error (111 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_parallel1_error (28 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_parallel1_error (22 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error (67 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error (29 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_19_window_1_error8_partsuncompressed (110 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial0_error (30 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial0_error (22 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error (22 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_19_window_serial1_error (23 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error (42 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed (195 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error (33 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_19_window_serial1_error (29 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partscompressed (62 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel0_error (34 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error (41 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error (33 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel0_error (46 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_parallel1_error (34 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error (41 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error (32 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_parallel1_error (44 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error2_partsuncompressed (63 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial0_error (34 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error (48 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial0_error (42 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/64_bins_23_window_serial1_error (35 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error (56 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed (128 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error (222 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel0_error (34 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error (223 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed (227 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error (40 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partscompressed (84 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/64_bins_23_window_serial1_error (44 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_parallel1_error (35 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error (60 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel0_error (34 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_parallel1_error (33 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed (73 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error (58 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial0_error (42 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error (31 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error4_partsuncompressed (81 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial0_error (32 ms) 12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error (31 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error (38 ms) +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_19_window_serial1_error (40 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed (79 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed (143 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error (310 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error (319 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_19_window_serial1_error (33 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel0_error (40 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error (67 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed (232 ms) -8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error (111 ms) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel0_error (46 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_parallel1_error (40 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error (67 ms) -12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error (55 ms) +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partscompressed (123 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_parallel1_error (44 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial0_error (41 ms) 11: [ RUN ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error -12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error (66 ms) -12: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing (3326 ms total) -12: -12: [----------] Global test environment tear-down -12: [==========] 49 tests from 2 test suites ran. (3349 ms total) -12: [ PASSED ] 49 tests. -12/14 Test #12: cli/search/search_ibf_preprocessing_test .... Passed 3.35 sec -11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error (119 ms) -11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing (3370 ms total) +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial0_error (44 ms) +12: [ RUN ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error +11: [ OK ] search_hibf_preprocessing_suite/search_hibf_preprocessing.pipeline_compressed_index/128_bins_23_window_serial1_error (42 ms) +11: [----------] 48 tests from search_hibf_preprocessing_suite/search_hibf_preprocessing (1443 ms total) 11: 11: [----------] Global test environment tear-down -11: [==========] 49 tests from 2 test suites ran. (3450 ms total) +11: [==========] 49 tests from 2 test suites ran. (1491 ms total) 11: [ PASSED ] 49 tests. -13/14 Test #11: cli/search/search_hibf_preprocessing_test ... Passed 3.45 sec -8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed (199 ms) -8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned (3385 ms total) +12/14 Test #11: cli/search/search_hibf_preprocessing_test ... Passed 1.50 sec +12: [ OK ] search_ibf_preprocessing_suite/search_ibf_preprocessing.pipeline_compressed_bins/128_bins_23_window_serial1_error (45 ms) +12: [----------] 48 tests from search_ibf_preprocessing_suite/search_ibf_preprocessing (1512 ms total) +12: +12: [----------] Global test environment tear-down +12: [==========] 49 tests from 2 test suites ran. (1529 ms total) +12: [ PASSED ] 49 tests. +13/14 Test #12: cli/search/search_ibf_preprocessing_test .... Passed 1.53 sec +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_0_error8_partsuncompressed (124 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partscompressed (60 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error2_partsuncompressed (59 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partscompressed (80 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error4_partsuncompressed (80 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partscompressed (124 ms) +8: [ RUN ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed +8: [ OK ] build_ibf_partitioned_suite/build_ibf_partitioned.pipeline/128_bins_23_window_1_error8_partsuncompressed (122 ms) +8: [----------] 24 tests from build_ibf_partitioned_suite/build_ibf_partitioned (2026 ms total) 8: 8: [----------] Global test environment tear-down -8: [==========] 25 tests from 2 test suites ran. (3456 ms total) +8: [==========] 25 tests from 2 test suites ran. (2075 ms total) 8: [ PASSED ] 25 tests. -14/14 Test #8: cli/build/build_ibf_partitioned_test ........ Passed 3.46 sec +14/14 Test #8: cli/build/build_ibf_partitioned_test ........ Passed 2.08 sec 100% tests passed, 0 tests failed out of 14 -Total Test time (real) = 3.47 sec +Total Test time (real) = 2.09 sec make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_unit' #dh_auto_test --arch --builddirectory build_performance #dh_auto_test --arch --builddirectory build_header dh_auto_test --arch --builddirectory build_snippet - cd build_snippet && make -j40 test ARGS\+=--verbose ARGS\+=-j40 + cd build_snippet && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j40 +/usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/DartConfiguration.tcl Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet @@ -4782,50 +4818,50 @@ 6: Test timeout computed to be: 10000000 1: User bin indices of 1-level-IBF: [1,2,3] 1: User bin indices of 2-level-IBF: [2,3] +3: Filename of user bin 0: path/example1.fasta +3: Filename of user bin 1: path/example2.fasta +3: Filename of user bin 2: path/example2.fasta +1/6 Test #1: snippet/hibf/bin_indices_of_ibf_snippet ................ Passed 0.01 sec +2/6 Test #3: snippet/hibf/filename_of_user_bin_snippet .............. Passed 0.01 sec +3/6 Test #5: snippet/snippet_main_snippet ........................... Passed 0.00 sec 2: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet 2: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.cpp 2: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet.out 2: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.out 2: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/bin_indices_of_ibf_snippet.err 2: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.err -2: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.out -3: Filename of user bin 0: path/example1.fasta -3: Filename of user bin 1: path/example2.fasta -3: Filename of user bin 2: path/example2.fasta -1/6 Test #1: snippet/hibf/bin_indices_of_ibf_snippet ................ Passed 0.02 sec -2/6 Test #3: snippet/hibf/filename_of_user_bin_snippet .............. Passed 0.02 sec -3/6 Test #5: snippet/snippet_main_snippet ........................... Passed 0.00 sec 4: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet 4: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.cpp 4: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet.out 4: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.out 4: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/hibf/filename_of_user_bin_snippet.err 4: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.err -4: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.out +2: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/bin_indices_of_ibf.out 6: -- TARGET_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet 6: -- SOURCE_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.cpp 6: -- ACTUAL_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet.out +4: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/hibf/filename_of_user_bin.out 6: -- EXPECTED_OUTPUT_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.out 6: -- ACTUAL_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet/snippet_main_snippet.err 6: -- EXPECTED_ERROR_FILE: /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.err 6: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.out 6: -- Output matches /build/reproducible-path/seqan-raptor-3.0.1+ds/test/snippet/snippet_main.err -4/6 Test #2: snippet/hibf/bin_indices_of_ibf_snippet_cmp_output ..... Passed 0.03 sec -5/6 Test #6: snippet/snippet_main_snippet_cmp_output ................ Passed 0.02 sec -6/6 Test #4: snippet/hibf/filename_of_user_bin_snippet_cmp_output ... Passed 0.03 sec +4/6 Test #6: snippet/snippet_main_snippet_cmp_output ................ Passed 0.02 sec +5/6 Test #2: snippet/hibf/bin_indices_of_ibf_snippet_cmp_output ..... Passed 0.03 sec +6/6 Test #4: snippet/hibf/filename_of_user_bin_snippet_cmp_output ... Passed 0.04 sec 100% tests passed, 0 tests failed out of 6 -Total Test time (real) = 0.05 sec +Total Test time (real) = 0.04 sec make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/build_snippet' make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' debian/rules override_dh_auto_test-indep make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_test --builddirectory doc_build - cd doc_build && make -j40 test ARGS\+=--verbose ARGS\+=-j40 + cd doc_build && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build' Running tests... -/usr/bin/ctest --force-new-ctest-process --verbose -j40 +/usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build/DartConfiguration.tcl Test project /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build @@ -4845,11 +4881,11 @@ test ! -s "doxygen.cerr"" 1: Working Directory: /build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build 1: Test timeout computed to be: 10000000 -1/1 Test #1: doc_no_warnings_test ............. Passed 2.00 sec +1/1 Test #1: doc_no_warnings_test ............. Passed 1.00 sec 100% tests passed, 0 tests failed out of 1 -Total Test time (real) = 2.01 sec +Total Test time (real) = 1.00 sec make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build' make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' create-stamp debian/debhelper-build-stamp @@ -4857,7 +4893,7 @@ debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_install --indep --builddir doc_build - cd doc_build && make -j40 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd doc_build && make -j42 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds/test/documentation -B/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4870,7 +4906,7 @@ make[2]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/doc_build' make[1]: Leaving directory '/build/reproducible-path/seqan-raptor-3.0.1+ds' dh_auto_install -Nseqan-raptor-doc - cd obj-x86_64-linux-gnu && make -j40 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" + cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/seqan-raptor-3.0.1\+ds/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-raptor-3.0.1+ds -B/build/reproducible-path/seqan-raptor-3.0.1+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall @@ -4903,8 +4939,8 @@ dh_gencontrol dh_md5sums dh_builddeb -dpkg-deb: building package 'seqan-raptor-dbgsym' in '../seqan-raptor-dbgsym_3.0.1+ds-10_amd64.deb'. dpkg-deb: building package 'seqan-raptor' in '../seqan-raptor_3.0.1+ds-10_amd64.deb'. +dpkg-deb: building package 'seqan-raptor-dbgsym' in '../seqan-raptor-dbgsym_3.0.1+ds-10_amd64.deb'. dpkg-deb: building package 'seqan-raptor-doc' in '../seqan-raptor-doc_3.0.1+ds-10_all.deb'. dpkg-genbuildinfo --build=binary -O../seqan-raptor_3.0.1+ds-10_amd64.buildinfo dpkg-genchanges --build=binary -O../seqan-raptor_3.0.1+ds-10_amd64.changes @@ -4913,12 +4949,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2624888/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/2577589 and its subdirectories -I: Current time: Tue Sep 16 12:18:12 -12 2025 -I: pbuilder-time-stamp: 1758068292 +I: removing directory /srv/workspace/pbuilder/2624888 and its subdirectories +I: Current time: Tue Oct 20 20:56:37 +14 2026 +I: pbuilder-time-stamp: 1792479397