Diff of the two buildlogs: -- --- b1/build.log 2025-04-03 08:55:45.323736604 +0000 +++ b2/build.log 2025-04-03 09:02:02.979225380 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Wed May 6 03:15:40 -12 2026 -I: pbuilder-time-stamp: 1778080540 +I: Current time: Thu Apr 3 22:55:49 +14 2025 +I: pbuilder-time-stamp: 1743670549 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -22,52 +22,84 @@ dpkg-source: info: unpacking biosig_3.9.0-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3082749/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 3 08:55 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='8b7cf9ba217b42c6b3427a067c3435be' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3082749' - PS1='# ' - PS2='> ' + INVOCATION_ID=dd83da019a064f1ab5d892aedb891d98 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=2738367 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iQJ6uNwo/pbuilderrc_aEMU --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iQJ6uNwo/b1 --logfile b1/build.log biosig_3.9.0-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iQJ6uNwo/pbuilderrc_3W7R --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iQJ6uNwo/b2 --logfile b2/build.log biosig_3.9.0-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.1.0-32-cloud-arm64 #1 SMP Debian 6.1.129-1 (2025-03-06) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-32-cloud-arm64 #1 SMP Debian 6.1.129-1 (2025-03-06) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3082749/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -717,7 +749,7 @@ Get: 586 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 587 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 75.8.0-1 [724 kB] Get: 588 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] -Fetched 217 MB in 2s (92.5 MB/s) +Fetched 217 MB in 2s (99.2 MB/s) Preconfiguring packages ... Selecting previously unselected package readline-common. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19924 files and directories currently installed.) @@ -2635,8 +2667,8 @@ Setting up tzdata (2025b-1) ... Current default time zone: 'Etc/UTC' -Local time is now: Wed May 6 15:17:18 UTC 2026. -Universal Time is now: Wed May 6 15:17:18 UTC 2026. +Local time is now: Thu Apr 3 08:58:29 UTC 2025. +Universal Time is now: Thu Apr 3 08:58:29 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:arm64 (1.17.0-2+b1) ... @@ -3133,7 +3165,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/biosig-3.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../biosig_3.9.0-1_source.changes +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/biosig-3.9.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../biosig_3.9.0-1_source.changes dpkg-buildpackage: info: source package biosig dpkg-buildpackage: info: source version 3.9.0-1 dpkg-buildpackage: info: source distribution unstable @@ -3346,7 +3382,9 @@ make[3]: Entering directory '/build/reproducible-path/biosig-3.9.0/biosig4c++' mkdir -p pkgconfig echo "# Defines libbiosig.pc" > "libbiosig.pc" +g++ -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_dcmtk_read.o" "./t210/sopen_dcmtk_read.cpp" echo "prefix=/usr" >>"libbiosig.pc" +cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ echo "exec_prefix=/usr" >>"libbiosig.pc" echo "libdir=/usr/lib/aarch64-linux-gnu" >>"libbiosig.pc" echo "includedir=/usr/include" >>"libbiosig.pc" @@ -3361,10 +3399,8 @@ echo "Cflags: -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML " >> "libbiosig.pc" echo "Libs: -lbiosig " >> "libbiosig.pc" echo "Libs.private: -lz -lcholmod -ldcmdata -loflog -lofstd -lm -ltinyxml" >> "libbiosig.pc" -g++ -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_dcmtk_read.o" "./t210/sopen_dcmtk_read.cpp" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "biosig.o" "biosig.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "biosig2.o" "biosig2.c" -cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "crc4scp.o" "./t220/crc4scp.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_cfs_read.o" "./t210/sopen_cfs_read.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_heka_read.o" "./t210/sopen_heka_read.c" @@ -3376,22 +3412,20 @@ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_abf_read.o" "./t210/sopen_abf_read.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_alpha_read.o" "./t210/sopen_alpha_read.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_axg_read.o" "./t210/sopen_axg_read.c" +./t210/sopen_alpha_read.c: In function 'sopen_alpha_read': +./t210/sopen_alpha_read.c:533:31: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] + 533 | hdr->FileName = FileName; + | ^ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_cadwell_read.o" "./t210/sopen_cadwell_read.c" +cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_biosigdump_read.o" "./t210/sopen_biosigdump_read.c" biosig.c: In function 'sopen_extended': +./t210/sopen_abf_read.c: In function 'sopen_abf_read': biosig.c:3943:93: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] 3943 | if (VERBOSE_LEVEL>7) fprintf(stdout,"%s (line %d): %s(...) count = %d\n",__FILE__,__LINE__,__func__,count); | ~^ ~~~~~ | | | | int size_t {aka long unsigned int} | %ld -cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_biosigdump_read.o" "./t210/sopen_biosigdump_read.c" -./t210/sopen_abf_read.c: In function 'sopen_abf_read': -biosig.c:7302:78: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] - 7302 | if (VERBOSE_LEVEL>7) fprintf(stdout,"%s (line %d) %s(...) k=%d\n",__FILE__,__LINE__,__func__,k); - | ~^ ~ - | | | - | int size_t {aka long unsigned int} - | %ld ./t210/sopen_abf_read.c:385:60: warning: format '%f' expects argument of type 'double', but argument 3 has type 'int' [-Wformat=] 385 | fprintf(stdout,"nExperimentType:\t%f\n",lei16p(hdr->AS.Header + offsetof(struct ABFFileHeader, nExperimentType))); | ~^ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ @@ -3399,10 +3433,12 @@ | | int | double | %d -./t210/sopen_alpha_read.c: In function 'sopen_alpha_read': -./t210/sopen_alpha_read.c:533:31: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] - 533 | hdr->FileName = FileName; - | ^ +biosig.c:7302:78: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] + 7302 | if (VERBOSE_LEVEL>7) fprintf(stdout,"%s (line %d) %s(...) k=%d\n",__FILE__,__LINE__,__func__,k); + | ~^ ~ + | | | + | int size_t {aka long unsigned int} + | %ld ./t210/sopen_cadwell_read.c: In function 'sopen_cadwell_read': ./t210/sopen_cadwell_read.c:66:101: warning: format '%x' expects argument of type 'unsigned int', but argument 5 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] 66 | if (VERBOSE_LEVEL > 8) fprintf(stdout,"%s (line %d): break loop (0x%x %s)\n",__FILE__,__LINE__, sectPos, sectName); @@ -3453,8 +3489,8 @@ | int size_t {aka long unsigned int} | %ld g++ -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sopen_hl7aecg.o" "./t230/sopen_hl7aecg.cpp" -cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "gdftime.o" "gdftime.c" cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "gdftime.o" "gdftime.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "mdc_ecg_codes.o" "mdc_ecg_codes.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "physicalunits.o" "physicalunits.c" g++ -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "sandbox.o" "test0/sandbox.c" @@ -3525,13 +3561,6 @@ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "LineFrequency.o" "t240/LineFrequency.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "MedicalDeviceComponents.o" "t240/MedicalDeviceComponents.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "VirtualMedicalDeviceSection.o" "t240/VirtualMedicalDeviceSection.c" -./t230/sopen_hl7aecg.cpp: In function 'int sopen_HL7aECG_read(HDRTYPE*)': -./t230/sopen_hl7aecg.cpp:616:56: warning: '%s' directive argument is null [-Wformat-overflow=] - 616 | fprintf(stdout,"hl7r: [413 2] <%s>\n", T0); - | ^~ -./t230/sopen_hl7aecg.cpp:655:79: warning: '%s' directive argument is null [-Wformat-overflow=] - 655 | fprintf(stdout,"hl7r: [413++]<%s>\n",name); - | ^~ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "MsmtPrinciple.o" "t240/MsmtPrinciple.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "ChannelDescriptionSection.o" "t240/ChannelDescriptionSection.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "ChannelStatus.o" "t240/ChannelStatus.c" @@ -3567,6 +3596,13 @@ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "MeasuredDataSection.o" "t240/MeasuredDataSection.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "SampleArrayMeasuredDataSection.o" "t240/SampleArrayMeasuredDataSection.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "SampleArrayMeasuredDataBlock.o" "t240/SampleArrayMeasuredDataBlock.c" +./t230/sopen_hl7aecg.cpp: In function 'int sopen_HL7aECG_read(HDRTYPE*)': +./t230/sopen_hl7aecg.cpp:616:56: warning: '%s' directive argument is null [-Wformat-overflow=] + 616 | fprintf(stdout,"hl7r: [413 2] <%s>\n", T0); + | ^~ +./t230/sopen_hl7aecg.cpp:655:79: warning: '%s' directive argument is null [-Wformat-overflow=] + 655 | fprintf(stdout,"hl7r: [413++]<%s>\n",name); + | ^~ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "RealTimeSampleArrayMeasuredDataSection.o" "t240/RealTimeSampleArrayMeasuredDataSection.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "TimeSampleArrayMeasuredDataSection.o" "t240/TimeSampleArrayMeasuredDataSection.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "MarkerEntryRelTim.o" "t240/MarkerEntryRelTim.c" @@ -3607,11 +3643,11 @@ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "constr_SEQUENCE_OF.o" "t240/constr_SEQUENCE_OF.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "constr_SET_OF.o" "t240/constr_SET_OF.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "OCTET_STRING.o" "t240/OCTET_STRING.c" -cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "BIT_STRING.o" "t240/BIT_STRING.c" t240/constr_SET_OF.c: In function 'SET_OF_decode_uper': t240/constr_SET_OF.c:918:46: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 918 | (int)nelems, (int)ct ? ct->effective_bits : -1); | ^ +cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "BIT_STRING.o" "t240/BIT_STRING.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "asn_codecs_prim.o" "t240/asn_codecs_prim.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "ber_tlv_length.o" "t240/ber_tlv_length.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "ber_tlv_tag.o" "t240/ber_tlv_tag.c" @@ -3625,8 +3661,9 @@ cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "per_opentype.o" "t240/per_opentype.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "per_support.o" "t240/per_support.c" cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "per_decoder.o" "t240/per_decoder.c" -t240/per_support.c: In function 'per_data_string': cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "per_encoder.o" "t240/per_encoder.c" +t240/per_support.c: In function 'per_data_string': +cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "sopen_fef_read.o" "t240/sopen_fef_read.c" t240/per_support.c:18:19: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 18 | (((int)pd->buffer) & 0xf), | ^ @@ -3677,14 +3714,14 @@ t240/per_support.c:109:19: warning: cast from pointer to integer of different size [-Wpointer-to-int-cast] 109 | (((int)pd->buffer) & 0xf), | ^ -cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -I t240 -o "sopen_fef_read.o" "t240/sopen_fef_read.c" g++ -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "scp-decode.o" "./t210/scp-decode.cpp" cc -c -D=ONLYGDF -D=WITHOUT_NETWORK -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "gdf.o" "biosig.c" -cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "getlogin.o" "win32/getlogin.c" cc1plus: warning: '-Werror=' argument '-Werror=implicit-function-declaration' is not valid for C++ +cc -c -D=__4HAERTEL__ -D=WITH_FAMOS -D=WITH_FIFF -D=WITHOUT_NETWORK -D=WITH_SCP3 -D=WITH_FEF -D=MAKE_EDFLIB -D=WITH_DCMTK -D=WITH_LIBTINYXML -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -pipe -fPIC -fno-builtin-memcmp -O2 -Wno-unused-result -Wno-deprecated -fvisibility=hidden -I/usr/include -o "getlogin.o" "win32/getlogin.c" rm -f "libphysicalunits.a" ar rcs "libphysicalunits.a" "physicalunits.o" g++ -Wl,-z,relro -Wl,-z,now -Wl,-soname="libphysicalunits.so.3" physicalunits.o -shared -lz -lcholmod -ldcmdata -loflog -lofstd -lm -ltinyxml -o "libphysicalunits.so.3" +ln -sf "libphysicalunits.so.3" "libphysicalunits.so" ./t210/scp-decode.cpp: In function 'void ReadByte(t1&)': ./t210/scp-decode.cpp:278:17: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 278 | B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; @@ -3724,7 +3761,6 @@ ./t210/scp-decode.cpp:118:49: note: declared here 118 | __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; | ^~~~~~~~~~ -ln -sf "libphysicalunits.so.3" "libphysicalunits.so" ./t210/scp-decode.cpp: In function 'void section_1_10(clinic&, uint16_t&)': ./t210/scp-decode.cpp:1210:25: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 1210 | B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; @@ -3950,7 +3986,6 @@ ./t210/scp-decode.cpp:118:49: note: declared here 118 | __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; | ^~~~~~~~~~ -biosig.c: In function 'sopen_extended': ./t210/scp-decode.cpp:2018:25: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 2018 | B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; | ^~~~~~~~~~ @@ -4000,12 +4035,7 @@ ./t210/scp-decode.cpp:118:49: note: declared here 118 | __attribute__ ((deprecated)) extern const char *B4C_ERRMSG; | ^~~~~~~~~~ -biosig.c:3943:93: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] - 3943 | if (VERBOSE_LEVEL>7) fprintf(stdout,"%s (line %d): %s(...) count = %d\n",__FILE__,__LINE__,__func__,count); - | ~^ ~~~~~ - | | | - | int size_t {aka long unsigned int} - | %ld +biosig.c: In function 'sopen_extended': ./t210/scp-decode.cpp: In instantiation of 'void ReadByte(t1&) [with t1 = unsigned int]': ./t210/scp-decode.cpp:378:10: required from here 378 | ReadByte(_DIM_FILE); @@ -4013,6 +4043,12 @@ ./t210/scp-decode.cpp:278:17: warning: 'B4C_ERRNUM' is deprecated [-Wdeprecated-declarations] 278 | B4C_ERRNUM = B4C_INSUFFICIENT_MEMORY; | ^~~~~~~~~~ +biosig.c:3943:93: warning: format '%d' expects argument of type 'int', but argument 6 has type 'size_t' {aka 'long unsigned int'} [-Wformat=] + 3943 | if (VERBOSE_LEVEL>7) fprintf(stdout,"%s (line %d): %s(...) count = %d\n",__FILE__,__LINE__,__func__,count); + | ~^ ~~~~~ + | | | + | int size_t {aka long unsigned int} + | %ld ./t210/scp-decode.cpp:117:41: note: declared here 117 | __attribute__ ((deprecated)) extern int B4C_ERRNUM; | ^~~~~~~~~~ @@ -4114,6 +4150,10 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ +rm -f "libgdf.a" +ar rcs "libgdf.a" gdf.o gdftime.o physicalunits.o +g++ -Wl,-z,relro -Wl,-z,now -Wl,-soname="libgdf.so.3" gdf.o gdftime.o physicalunits.o getlogin.o -shared -lz -lcholmod -ldcmdata -loflog -lofstd -lm -ltinyxml -o "libgdf.so.3" +ln -sf "libgdf.so.3" "libgdf.so" biosig.c:12377:59: warning: '%c' directive output may be truncated writing 1 byte into a region of size between 0 and 80 [-Wformat-truncation=] 12377 | snprintf(cmd,MAX_LENGTH_PID+1,"%s %c %s X",hdr->Patient.Id,GENDER[hdr->Patient.Sex],tmp); | ^~ @@ -4143,10 +4183,6 @@ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ -rm -f "libgdf.a" -g++ -Wl,-z,relro -Wl,-z,now -Wl,-soname="libgdf.so.3" gdf.o gdftime.o physicalunits.o getlogin.o -shared -lz -lcholmod -ldcmdata -loflog -lofstd -lm -ltinyxml -o "libgdf.so.3" -ar rcs "libgdf.a" gdf.o gdftime.o physicalunits.o -ln -sf "libgdf.so.3" "libgdf.so" rm -f libbiosig.a ar rcs libbiosig.a sopen_dcmtk_read.o biosig.o biosig2.o crc4scp.o sopen_cfs_read.o sopen_heka_read.o sopen_igor.o sopen_hdf5.o sopen_matio.o sopen_sqlite.o sopen_scp_read.o sopen_abf_read.o sopen_alpha_read.o sopen_axg_read.o sopen_cadwell_read.o sopen_biosigdump_read.o sopen_rhd2000_read.o sopen_scp_write.o sopen_hl7aecg.o gdftime.o mdc_ecg_codes.o physicalunits.o sandbox.o xgethostname.o sopen_famos_read.o Address.o MetricMeasure.o UnitCode.o HealthCareProviderId.o INT-U64.o INT-I64.o INT-U32.o INT-I32.o INT-U16.o INT-I16.o INT-U8.o INT-I8.o BITS-32.o BITS-16.o BITS-8.o FEFString.o FEFFloat.o Fraction.o AbsoluteRange.o Handle.o HandleRef.o DeviceCode.o UnitsOfMeasurementCode.o MetricsCode.o BodySiteCode.o AlertCode.o ExtNomenclatureCode.o ParameterGroupCode.o PrivateCode.o Placeholder.o ManufacturerID.o AbsoluteTime.o RelativeTime.o HighResRelativeTime.o ObservationTime.o SimpleColour.o ExtNomenRef.o PersonNameGroup.o PersonName.o OID-Type.o SessionArchiveSection.o ArchiveProtection.o ManufacturerSpecificSection.o ManufacturerSpecificEncoded.o ManufacturerSpecificBinary.o HealthCareProviderSection.o HealthCareProfessionalSection.o Authorization.o PatientDemographicsSection.o PatMeasure.o PatientSex.o PatientType.o PatientRace.o SessionTestSection.o MedicalDeviceSystemSection.o SystemModel.o SystemSpecEntry.o ProdSpecEntryType.o ProdSpecEntry.o ApplicationArea.o PowerStatus.o LineFrequency.o MedicalDeviceComponents.o VirtualMedicalDeviceSection.o MsmtPrinciple.o ChannelDescriptionSection.o ChannelStatus.o MultimediaSection.o Comments.o ContentOrReference.o SessionPhaseSection.o DescriptiveDataSection.o MetricDescriptiveDataSection.o MetricStatus.o MetricCategory.o MetricCalEntry.o MetricCalType.o MetricCalState.o MeasurementStatus.o SampleArrayDescriptiveDataSection.o SaSpec.o StorageDataType.o SaFlags.o ScaleRangeSpec.o SaFilterEntry.o FilterType.o SaGridEntry.o SaCalData.o SaCalDataType.o SaSignalFrequency.o RealTimeSampleArrayDescriptiveDataSection.o TimeSampleArrayDescriptiveDataSection.o DistributionSampleArrayDescriptiveDataSection.o DsaRangeSpec.o NumericDescriptiveDataSection.o EnumerationDescriptiveDataSection.o MeasuredDataSection.o SampleArrayMeasuredDataSection.o SampleArrayMeasuredDataBlock.o RealTimeSampleArrayMeasuredDataSection.o TimeSampleArrayMeasuredDataSection.o MarkerEntryRelTim.o DistributionSampleArrayMeasuredDataSection.o NumericMeasuredDataSection.o ChoiceOfNuObsValue.o NuObsValue.o DispResolution.o EnumerationMeasuredDataSection.o ChoiceOfEnumObsValue.o EnumObsValue.o EnumVal.o EnumObject.o EnumRecordMetric.o EnumRecordOO.o ChoiceOfEnumTimeStamp.o AlertSection.o AlertCondition.o AlertControls.o AlertFlags.o AlertType.o LimitSpecEntry.o CurLimAlStat.o DynamicAttributeChangeSection.o SessionNotesSection.o ANY.o GeneralizedTime.o INTEGER.o NativeEnumerated.o NativeInteger.o OBJECT_IDENTIFIER.o REAL.o UTF8String.o asn_SEQUENCE_OF.o asn_SET_OF.o constr_CHOICE.o constr_SEQUENCE.o constr_SEQUENCE_OF.o constr_SET_OF.o OCTET_STRING.o BIT_STRING.o asn_codecs_prim.o ber_tlv_length.o ber_tlv_tag.o ber_decoder.o constr_TYPE.o constraints.o der_encoder.o xer_support.o xer_decoder.o xer_encoder.o per_opentype.o per_support.o per_decoder.o per_encoder.o sopen_fef_read.o scp-decode.o g++ -Wl,-z,relro -Wl,-z,now -Wl,-soname="libbiosig.so.3" sopen_dcmtk_read.o biosig.o biosig2.o crc4scp.o sopen_cfs_read.o sopen_heka_read.o sopen_igor.o sopen_hdf5.o sopen_matio.o sopen_sqlite.o sopen_scp_read.o sopen_abf_read.o sopen_alpha_read.o sopen_axg_read.o sopen_cadwell_read.o sopen_biosigdump_read.o sopen_rhd2000_read.o sopen_scp_write.o sopen_hl7aecg.o gdftime.o mdc_ecg_codes.o physicalunits.o sandbox.o xgethostname.o sopen_famos_read.o Address.o MetricMeasure.o UnitCode.o HealthCareProviderId.o INT-U64.o INT-I64.o INT-U32.o INT-I32.o INT-U16.o INT-I16.o INT-U8.o INT-I8.o BITS-32.o BITS-16.o BITS-8.o FEFString.o FEFFloat.o Fraction.o AbsoluteRange.o Handle.o HandleRef.o DeviceCode.o UnitsOfMeasurementCode.o MetricsCode.o BodySiteCode.o AlertCode.o ExtNomenclatureCode.o ParameterGroupCode.o PrivateCode.o Placeholder.o ManufacturerID.o AbsoluteTime.o RelativeTime.o HighResRelativeTime.o ObservationTime.o SimpleColour.o ExtNomenRef.o PersonNameGroup.o PersonName.o OID-Type.o SessionArchiveSection.o ArchiveProtection.o ManufacturerSpecificSection.o ManufacturerSpecificEncoded.o ManufacturerSpecificBinary.o HealthCareProviderSection.o HealthCareProfessionalSection.o Authorization.o PatientDemographicsSection.o PatMeasure.o PatientSex.o PatientType.o PatientRace.o SessionTestSection.o MedicalDeviceSystemSection.o SystemModel.o SystemSpecEntry.o ProdSpecEntryType.o ProdSpecEntry.o ApplicationArea.o PowerStatus.o LineFrequency.o MedicalDeviceComponents.o VirtualMedicalDeviceSection.o MsmtPrinciple.o ChannelDescriptionSection.o ChannelStatus.o MultimediaSection.o Comments.o ContentOrReference.o SessionPhaseSection.o DescriptiveDataSection.o MetricDescriptiveDataSection.o MetricStatus.o MetricCategory.o MetricCalEntry.o MetricCalType.o MetricCalState.o MeasurementStatus.o SampleArrayDescriptiveDataSection.o SaSpec.o StorageDataType.o SaFlags.o ScaleRangeSpec.o SaFilterEntry.o FilterType.o SaGridEntry.o SaCalData.o SaCalDataType.o SaSignalFrequency.o RealTimeSampleArrayDescriptiveDataSection.o TimeSampleArrayDescriptiveDataSection.o DistributionSampleArrayDescriptiveDataSection.o DsaRangeSpec.o NumericDescriptiveDataSection.o EnumerationDescriptiveDataSection.o MeasuredDataSection.o SampleArrayMeasuredDataSection.o SampleArrayMeasuredDataBlock.o RealTimeSampleArrayMeasuredDataSection.o TimeSampleArrayMeasuredDataSection.o MarkerEntryRelTim.o DistributionSampleArrayMeasuredDataSection.o NumericMeasuredDataSection.o ChoiceOfNuObsValue.o NuObsValue.o DispResolution.o EnumerationMeasuredDataSection.o ChoiceOfEnumObsValue.o EnumObsValue.o EnumVal.o EnumObject.o EnumRecordMetric.o EnumRecordOO.o ChoiceOfEnumTimeStamp.o AlertSection.o AlertCondition.o AlertControls.o AlertFlags.o AlertType.o LimitSpecEntry.o CurLimAlStat.o DynamicAttributeChangeSection.o SessionNotesSection.o ANY.o GeneralizedTime.o INTEGER.o NativeEnumerated.o NativeInteger.o OBJECT_IDENTIFIER.o REAL.o UTF8String.o asn_SEQUENCE_OF.o asn_SET_OF.o constr_CHOICE.o constr_SEQUENCE.o constr_SEQUENCE_OF.o constr_SET_OF.o OCTET_STRING.o BIT_STRING.o asn_codecs_prim.o ber_tlv_length.o ber_tlv_tag.o ber_decoder.o constr_TYPE.o constraints.o der_encoder.o xer_support.o xer_decoder.o xer_encoder.o per_opentype.o per_support.o per_decoder.o per_encoder.o sopen_fef_read.o scp-decode.o -shared -lz -lcholmod -ldcmdata -loflog -lofstd -lm -ltinyxml -o "libbiosig.so.3" @@ -4161,20 +4197,20 @@ make[3]: Leaving directory '/build/reproducible-path/biosig-3.9.0/biosig4c++' make -C biosig4c++ biosig4octave make[3]: Entering directory '/build/reproducible-path/biosig-3.9.0/biosig4c++' -echo "/tmp/biosig.si9NSW/biosig4octave-3.9.0 generated"; -/tmp/biosig.si9NSW/biosig4octave-3.9.0 generated -cp mex/README /tmp/biosig.si9NSW/biosig4octave-3.9.0/doc/ -sed -e 's#^Name.*$#Name: biosig#g' -e '/^Title/ s#mexBiosig#Biosig#g' -e 's#^Version.*$#Version: 3.9.0#g' -e 's#^Date.*$#Date: '2026-05-06'#g' mex/DESCRIPTION > /tmp/biosig.si9NSW/biosig4octave-3.9.0/DESCRIPTION -cp ../COPYING ../CITATION /tmp/biosig.si9NSW/biosig4octave-3.9.0/ -cp mex/*.cpp mex/Makefile /tmp/biosig.si9NSW/biosig4octave-3.9.0/src/ -cp -r ../biosig4matlab/* /tmp/biosig.si9NSW/biosig4octave-3.9.0/inst/ -rm /tmp/biosig.si9NSW/biosig4octave-3.9.0/inst/t300_FeatureExtraction/hurst.m # is part of Octave Signal package -rm -r /tmp/biosig.si9NSW/biosig4octave-3.9.0/inst/maybe-missing +echo "/tmp/biosig.motGLG/biosig4octave-3.9.0 generated"; +/tmp/biosig.motGLG/biosig4octave-3.9.0 generated +cp mex/README /tmp/biosig.motGLG/biosig4octave-3.9.0/doc/ +sed -e 's#^Name.*$#Name: biosig#g' -e '/^Title/ s#mexBiosig#Biosig#g' -e 's#^Version.*$#Version: 3.9.0#g' -e 's#^Date.*$#Date: '2025-04-03'#g' mex/DESCRIPTION > /tmp/biosig.motGLG/biosig4octave-3.9.0/DESCRIPTION +cp ../COPYING ../CITATION /tmp/biosig.motGLG/biosig4octave-3.9.0/ +cp mex/*.cpp mex/Makefile /tmp/biosig.motGLG/biosig4octave-3.9.0/src/ +cp -r ../biosig4matlab/* /tmp/biosig.motGLG/biosig4octave-3.9.0/inst/ +rm /tmp/biosig.motGLG/biosig4octave-3.9.0/inst/t300_FeatureExtraction/hurst.m # is part of Octave Signal package +rm -r /tmp/biosig.motGLG/biosig4octave-3.9.0/inst/maybe-missing ### TODO -#touch /tmp/biosig.si9NSW/biosig4octave-3.9.0/src/mex{SOPEN,SLOAD,SSAVE}.m -tar -czf "mex/biosig4octave-3.9.0.src.tar.gz" /tmp/biosig.si9NSW/biosig4octave-3.9.0/../biosig4octave-3.9.0 -tar: Removing leading `/tmp/biosig.si9NSW/biosig4octave-3.9.0/../' from member names -rm -rf /tmp/biosig.si9NSW +#touch /tmp/biosig.motGLG/biosig4octave-3.9.0/src/mex{SOPEN,SLOAD,SSAVE}.m +tar -czf "mex/biosig4octave-3.9.0.src.tar.gz" /tmp/biosig.motGLG/biosig4octave-3.9.0/../biosig4octave-3.9.0 +tar: Removing leading `/tmp/biosig.motGLG/biosig4octave-3.9.0/../' from member names +rm -rf /tmp/biosig.motGLG (cd mex && ln -sf biosig4octave-3.9.0.src.tar.gz biosig4octave.src.tar.gz) echo "### In order to publish release, run ### " ### In order to publish release, run ### @@ -4185,22 +4221,22 @@ MKOCTFILE="/usr/bin/mkoctfile" make -C biosig4c++/mex mex4o make[3]: Entering directory '/build/reproducible-path/biosig-3.9.0/biosig4c++/mex' /usr/bin/mkoctfile -I.. -v -g --mex "mexSLOAD.cpp" -L.. -lbiosig -o "mexSLOAD.mex" +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSLOAD.cpp -o /tmp/oct-wz0Aw4.o echo "#define mexSOPEN" > mexSOPEN.cpp -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSLOAD.cpp -o /tmp/oct-Dh2Xdu.o -cat mexSLOAD.cpp >> mexSOPEN.cpp /usr/bin/mkoctfile -I.. -v -g --mex "mexSSAVE.cpp" -L.. -lbiosig -o "mexSSAVE.mex" +cat mexSLOAD.cpp >> mexSOPEN.cpp +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSSAVE.cpp -o /tmp/oct-nTncT8.o /usr/bin/mkoctfile -I.. -v -g --mex "physicalunits.cpp" -L.. -lbiosig -o "physicalunits.mex" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSSAVE.cpp -o /tmp/oct-4dKHEK.o /usr/bin/mkoctfile -I.. -v -g --mex "accovf_mex.cpp" -L.. -lbiosig -o "accovf_mex.mex" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG physicalunits.cpp -o /tmp/oct-aZPVI5.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG physicalunits.cpp -o /tmp/oct-a0DWyA.o +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG accovf_mex.cpp -o /tmp/oct-UHy996.o /usr/bin/mkoctfile -I.. -v -g --mex "mexSOPEN.cpp" -L.. -lbiosig -o "mexSOPEN.mex" -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG accovf_mex.cpp -o /tmp/oct-FgcN8g.o -g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSOPEN.cpp -o /tmp/oct-wHac6u.o -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o physicalunits.mex /tmp/oct-aZPVI5.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o accovf_mex.mex /tmp/oct-FgcN8g.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSOPEN.mex /tmp/oct-wHac6u.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSSAVE.mex /tmp/oct-4dKHEK.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro -g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSLOAD.mex /tmp/oct-Dh2Xdu.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -c -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -I.. -I. -DMEX_DEBUG mexSOPEN.cpp -o /tmp/oct-rCgc4G.o +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o physicalunits.mex /tmp/oct-a0DWyA.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o accovf_mex.mex /tmp/oct-UHy996.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSOPEN.mex /tmp/oct-rCgc4G.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSSAVE.mex /tmp/oct-nTncT8.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro +g++ -I/usr/include/octave-9.4.0/octave/.. -I/usr/include/octave-9.4.0/octave -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/biosig-3.9.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -o mexSLOAD.mex /tmp/oct-wz0Aw4.o -L.. -lbiosig -shared -Wl,-Bsymbolic -Wl,-z,relro -Wl,-z,now -shared -flto=auto -ffat-lto-objects -Wl,-z,relro make[3]: Leaving directory '/build/reproducible-path/biosig-3.9.0/biosig4c++/mex' make[2]: pyversions: No such file or directory PYTHON=/usr/bin/python3 make -C biosig4c++/python sdist @@ -4261,15 +4297,15 @@ install -d /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/ install libbiosig.so.3 /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/libbiosig.so.3 cd /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu && ln -sf libbiosig.so.3 libbiosig.so -install -d /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/ ldconfig +install -d /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/ install libbiosig.a /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu install -d /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/include install libphysicalunits.a /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu -install biosig-dev.h biosig.h biosig2.h gdftime.h physicalunits.h /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/include -install -m 0644 libbiosig.pc /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/ ldconfig: Can't create temporary cache file /etc/ld.so.cache~: Permission denied make[3]: [Makefile:1012: install_libbiosig.so] Error 1 (ignored) +install biosig-dev.h biosig.h biosig2.h gdftime.h physicalunits.h /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/include +install -m 0644 libbiosig.pc /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig/ install -d /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/bin install save2gdf physicalunits biosig_fhir biosig2gdf /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/bin install heka2itx /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/bin @@ -4357,7 +4393,7 @@ Checking m files ... warning: function /build/reproducible-path/biosig-3.9.0/debian/tmp/usr/share/octave/site/m/biosig/t300_FeatureExtraction/hurst.m shadows a core library function warning: called from - /tmp/tmp.PZVQxGqlfl at line 12 column 1 + /tmp/tmp.icKCiw7bij at line 12 column 1 Checking C++ files ... Done running the unit tests. @@ -4433,24 +4469,24 @@ dh_numpy3: warning: skipping binary package biosig-tools which does not depend on the NumPy C ABI dh_numpy3: warning: skipping binary package octave-biosig which does not depend on the NumPy C ABI dh_gencontrol +dpkg-gencontrol: warning: package libbiosig-dev: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package libbiosig3: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package biosig-tools: substitution variable ${octave:Depends} unused, but is defined -dpkg-gencontrol: warning: package libbiosig-dev: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package python3-biosig: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package libbiosig3: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package biosig-tools: substitution variable ${octave:Depends} unused, but is defined dpkg-gencontrol: warning: package python3-biosig: substitution variable ${octave:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'libbiosig3' in '../libbiosig3_3.9.0-1_arm64.deb'. -dpkg-deb: building package 'python3-biosig-dbgsym' in '../python3-biosig-dbgsym_3.9.0-1_arm64.deb'. -dpkg-deb: building package 'octave-biosig-dbgsym' in '../octave-biosig-dbgsym_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'libbiosig-dev' in '../libbiosig-dev_3.9.0-1_arm64.deb'. dpkg-deb: building package 'biosig-tools-dbgsym' in '../biosig-tools-dbgsym_3.9.0-1_arm64.deb'. -dpkg-deb: building package 'python3-biosig' in '../python3-biosig_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'python3-biosig-dbgsym' in '../python3-biosig-dbgsym_3.9.0-1_arm64.deb'. dpkg-deb: building package 'biosig-tools' in '../biosig-tools_3.9.0-1_arm64.deb'. -dpkg-deb: building package 'libbiosig-dev' in '../libbiosig-dev_3.9.0-1_arm64.deb'. -dpkg-deb: building package 'octave-biosig' in '../octave-biosig_3.9.0-1_arm64.deb'. dpkg-deb: building package 'libbiosig3-dbgsym' in '../libbiosig3-dbgsym_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'libbiosig3' in '../libbiosig3_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'python3-biosig' in '../python3-biosig_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'octave-biosig' in '../octave-biosig_3.9.0-1_arm64.deb'. +dpkg-deb: building package 'octave-biosig-dbgsym' in '../octave-biosig-dbgsym_3.9.0-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../biosig_3.9.0-1_arm64.buildinfo dpkg-genchanges --build=binary -O../biosig_3.9.0-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -4458,12 +4494,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/2738367/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3082749 and its subdirectories -I: Current time: Wed May 6 03:18:41 -12 2026 -I: pbuilder-time-stamp: 1778080721 +I: removing directory /srv/workspace/pbuilder/2738367 and its subdirectories +I: Current time: Thu Apr 3 23:01:57 +14 2025 +I: pbuilder-time-stamp: 1743670917