Diff of the two buildlogs: -- --- b1/build.log 2025-02-17 17:54:22.411500850 +0000 +++ b2/build.log 2025-02-17 17:56:15.158472377 +0000 @@ -1,7 +1,7 @@ W: cgroups are not available on the host, not using them. I: pbuilder: network access will be disabled during build -I: Current time: Mon Feb 17 05:52:30 -12 2025 -I: pbuilder-time-stamp: 1739814750 +I: Current time: Mon Mar 23 14:17:25 +14 2026 +I: pbuilder-time-stamp: 1774225045 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -32,51 +32,83 @@ dpkg-source: info: applying netcdf-4.9.3.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/810637/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 23 00:17 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='810637' - PS1='# ' - PS2='> ' + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=4056466 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vTtzX3qj/pbuilderrc_xf2J --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vTtzX3qj/b1 --logfile b1/build.log minc-tools_2.3.00+dfsg-12.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/sbin/chroot' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vTtzX3qj/pbuilderrc_20p7 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vTtzX3qj/b2 --logfile b2/build.log minc-tools_2.3.00+dfsg-12.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/810637/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -309,7 +341,7 @@ Get: 175 http://deb.debian.org/debian unstable/main arm64 xdg-utils all 1.2.1-2 [75.8 kB] Get: 176 http://deb.debian.org/debian unstable/main arm64 texlive-base all 2024.20250114-1 [22.8 MB] Get: 177 http://deb.debian.org/debian unstable/main arm64 texlive-latex-base all 2024.20250114-1 [1282 kB] -Fetched 116 MB in 1s (111 MB/s) +Fetched 116 MB in 1s (216 MB/s) Preconfiguring packages ... Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19918 files and directories currently installed.) @@ -1051,7 +1083,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/minc-tools-2.3.00+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../minc-tools_2.3.00+dfsg-12_source.changes +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/minc-tools-2.3.00+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../minc-tools_2.3.00+dfsg-12_source.changes dpkg-buildpackage: info: source package minc-tools dpkg-buildpackage: info: source version 2.3.00+dfsg-12 dpkg-buildpackage: info: source distribution unstable @@ -1170,7 +1206,7 @@ -- Looking for include file pwd.h - found -- Found BISON: /usr/bin/bison (found version "3.8.2") -- Found FLEX: /usr/bin/flex (found version "2.6.4") --- Configuring done (6.3s) +-- Configuring done (7.5s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: @@ -1200,417 +1236,389 @@ make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincaverage.dir/DependInfo.cmake "--color=" make -f progs/CMakeFiles/minccalc.dir/build.make progs/CMakeFiles/minccalc.dir/depend -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincgen.dir/build.make progs/CMakeFiles/mincgen.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincconcat.dir/build.make progs/CMakeFiles/mincconcat.dir/depend -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 1%] [BISON][gram] Building parser with bison 3.8.2 +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison --debug -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/gram.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y +[ 2%] [FLEX][lex] Building scanner with flex 2.6.4 make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincconcat.dir/DependInfo.cmake "--color=" -make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/build -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincconvert.dir/build.make progs/CMakeFiles/mincconvert.dir/depend -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincconvert.dir/DependInfo.cmake "--color=" +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: warning: 111 shift/reduce conflicts [-Wconflicts-sr] +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples make -f progs/CMakeFiles/minccopy.dir/build.make progs/CMakeFiles/minccopy.dir/depend -[ 2%] [BISON][gram] Building parser with bison 3.8.2 -[ 2%] [FLEX][ncgenyy] Building scanner with flex 2.6.4 +[ 3%] Building C object progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/minccopy.dir/DependInfo.cmake "--color=" make -f progs/CMakeFiles/mincdump.dir/build.make progs/CMakeFiles/mincdump.dir/depend -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/ncgenyy.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgenyy.l +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -MF CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o.d -o CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincview/invert_raw_image.c +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincconvert.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincdump.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/lex.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/lex.l +make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/build +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincexample1.dir/build.make progs/CMakeFiles/mincexample1.dir/depend -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison --debug -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/gram.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y -[ 3%] Building C object progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/mincconvert.dir/build.make progs/CMakeFiles/mincconvert.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincexample1.dir/DependInfo.cmake "--color=" -[ 4%] [FLEX][lex] Building scanner with flex 2.6.4 -[ 4%] [BISON][ncgentab] Building parser with bison 3.8.2 -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/ncgentab.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y -[ 5%] Building C object progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/lex.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/lex.l -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -MF CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o.d -o 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progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -MF CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o.d -o CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincaverage/mincaverage.c +make -f progs/CMakeFiles/mincexample2.dir/build.make progs/CMakeFiles/mincexample2.dir/depend +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincexample2.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: warning: 111 shift/reduce conflicts [-Wconflicts-sr] -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples +make -f progs/CMakeFiles/minccopy.dir/build.make progs/CMakeFiles/minccopy.dir/build make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: warning: 1 shift/reduce conflict [-Wconflicts-sr] -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make[3]: Entering directory 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progs/CMakeFiles/mincconcat.dir/mincconcat/mincconcat.c.o -make -f progs/CMakeFiles/mincexample1.dir/build.make progs/CMakeFiles/mincexample1.dir/build +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/ncgentab.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y[ 4%] [FLEX][ncgenyy] Building scanner with flex 2.6.4 +[ 5%] Building C object progs/CMakeFiles/mincconcat.dir/mincconcat/mincconcat.c.o +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu 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progs/CMakeFiles/mincexample1.dir/build +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincexpand.dir/DependInfo.cmake "--color=" +[ 8%] Building C object progs/CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu 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-Wl,--dependency-file=CMakeFiles/mincconvert.dir/link.d CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -o mincconvert -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/invert_raw_image.dir/link.d CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -o invert_raw_image -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 21%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -MF CMakeFiles/mincdump.dir/mincdump/dumplib.c.o.d -o 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progs/CMakeFiles/mincextract.dir/mincextract/mincextract.c.o -MF CMakeFiles/mincextract.dir/mincextract/mincextract.c.o.d -o CMakeFiles/mincextract.dir/mincextract/mincextract.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincextract/mincextract.c -[ 23%] Building C object progs/CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -MF CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o.d -o CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincinfo/mincinfo.c -[ 24%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o -MF CMakeFiles/minccalc.dir/minccalc/ident.c.o.d -o CMakeFiles/minccalc.dir/minccalc/ident.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/ident.c -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexample2.dir/link.d CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -o mincexample2 -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/invert_raw_image.dir/link.d CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -o invert_raw_image -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +make -f progs/CMakeFiles/mincinfo.dir/build.make progs/CMakeFiles/mincinfo.dir/build +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 21%] Building C object progs/CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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-mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/node.c.o -MF CMakeFiles/minccalc.dir/minccalc/node.c.o.d -o CMakeFiles/minccalc.dir/minccalc/node.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/node.c -[ 24%] Built target invert_raw_image +[ 22%] Building C object progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -MF CMakeFiles/mincdump.dir/mincdump/dumplib.c.o.d -o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincdump/dumplib.c +[ 22%] Building C object progs/CMakeFiles/mincgen.dir/ncgenyy.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgenyy.c.o -MF CMakeFiles/mincgen.dir/ncgenyy.c.o.d -o CMakeFiles/mincgen.dir/ncgenyy.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/ncgenyy.c +[ 22%] Built target mincexpand make -f progs/CMakeFiles/minclookup.dir/build.make progs/CMakeFiles/minclookup.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/minclookup.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/minclookup.dir/build.make progs/CMakeFiles/minclookup.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 25%] Built target mincexample2 -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexample1.dir/link.d CMakeFiles/mincexample1.dir/mincexample/mincexample1.c.o -o mincexample1 -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib -lminc2 -lm -lz -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincconvert.dir/link.d CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -o mincconvert -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincexample2.dir/link.d CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o -o mincexample2 -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib -lminc2 -lm -lz -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 22%] Built target mincconvert make -f progs/CMakeFiles/mincmakescalar.dir/build.make progs/CMakeFiles/mincmakescalar.dir/depend +[ 22%] Building C object progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -MF CMakeFiles/minclookup.dir/minclookup/minclookup.c.o.d -o CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minclookup/minclookup.c make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincmakescalar.dir/DependInfo.cmake "--color=" -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincconcat.dir/link.d CMakeFiles/mincconcat.dir/mincconcat/mincconcat.c.o -o mincconcat -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 25%] Built target mincexample1 +[ 22%] Built target mincexample2 make -f progs/CMakeFiles/mincmakevector.dir/build.make progs/CMakeFiles/mincmakevector.dir/depend -[ 25%] Built target mincconcat -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 25%] Building C object progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -MF CMakeFiles/minclookup.dir/minclookup/minclookup.c.o.d -o CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minclookup/minclookup.c make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincmakevector.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincmakescalar.dir/build.make progs/CMakeFiles/mincmakescalar.dir/build -[ 26%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/optim.c.o +[ 23%] Linking C executable mincaverage +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincaverage.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/optim.c.o -MF CMakeFiles/minccalc.dir/minccalc/optim.c.o.d -o CMakeFiles/minccalc.dir/minccalc/optim.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/optim.c +[ 23%] Linking C executable mincconcat +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincconcat.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincmakevector.dir/build.make progs/CMakeFiles/mincmakevector.dir/build -[ 27%] Building C object progs/CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 24%] Building C object progs/CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -MF CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o.d -o CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib/minc_endian.c make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincmath.dir/build.make progs/CMakeFiles/mincmath.dir/build +[ 26%] Linking C executable mincdump +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E 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-o mincaverage -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 32%] Building C object progs/CMakeFiles/minccalc.dir/lex.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincmath.dir/mincmath/mincmath.c.o -MF CMakeFiles/mincmath.dir/mincmath/mincmath.c.o.d -o CMakeFiles/mincmath.dir/mincmath/mincmath.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincmath/mincmath.c +[ 27%] Built target mincaverage make -f progs/CMakeFiles/minc_modify_header.dir/build.make progs/CMakeFiles/minc_modify_header.dir/depend -[ 34%] Building C object progs/CMakeFiles/minccalc.dir/gram.c.o +[ 28%] Linking C executable mincmakevector make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/minc_modify_header.dir/DependInfo.cmake "--color=" -[ 35%] Linking C executable mincdump -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincdump.dir/link.txt --verbose=1 -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/gram.c.o -MF CMakeFiles/minccalc.dir/gram.c.o.d -o CMakeFiles/minccalc.dir/gram.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/gram.c +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmakevector.dir/link.txt --verbose=1 +[ 29%] Linking C executable mincextract +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincextract.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/minc_modify_header.dir/build.make progs/CMakeFiles/minc_modify_header.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 36%] Building C object progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o +[ 30%] Building C object progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -MF CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o.d -o CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minc_modify_header/minc_modify_header.c -[ 37%] Linking C executable mincmakevector -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmakevector.dir/link.txt --verbose=1 -[ 38%] Linking C executable mincmakescalar -cd 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Linking C executable mincinfo +[ 32%] Built target mincconcat make -f progs/CMakeFiles/mincresample.dir/build.make progs/CMakeFiles/mincresample.dir/depend +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincinfo.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincresample.dir/DependInfo.cmake "--color=" -[ 39%] Linking C executable minc_modify_header -cd 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -MF CMakeFiles/mincresample.dir/mincresample/mincresample.c.o.d -o CMakeFiles/mincresample.dir/mincresample/mincresample.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincmakevector.dir/link.d CMakeFiles/mincmakevector.dir/mincmakevector/mincmakevector.c.o -o mincmakevector -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +[ 34%] Linking C executable minclookup +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minclookup.dir/link.txt --verbose=1 +[ 35%] Linking C executable mincmath +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmath.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincdump.dir/link.d CMakeFiles/mincdump.dir/mincdump/mincdump.c.o CMakeFiles/mincdump.dir/mincdump/vardata.c.o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -o mincdump -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 40%] Built target mincmakevector +[ 36%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/escapes.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/escapes.c.o -MF CMakeFiles/mincgen.dir/mincgen/escapes.c.o.d -o CMakeFiles/mincgen.dir/mincgen/escapes.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/escapes.c +[ 36%] Built target mincdump make -f progs/CMakeFiles/mincreshape.dir/build.make progs/CMakeFiles/mincreshape.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincreshape.dir/DependInfo.cmake "--color=" -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincmakescalar.dir/link.d CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o -o mincmakescalar -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/mincreshape.dir/build.make progs/CMakeFiles/mincreshape.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 41%] Linking C executable mincinfo -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincinfo.dir/link.txt --verbose=1 -[ 42%] Building C object progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o +[ 37%] Building C object progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -MF CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o.d -o CMakeFiles/mincreshape.dir/mincreshape/mincreshape.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincreshape/mincreshape.c -[ 42%] Built target mincmakescalar +[ 37%] Linking C executable minc_modify_header +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_modify_header.dir/link.txt --verbose=1 +[ 38%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/genlib.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/genlib.c.o -MF CMakeFiles/mincgen.dir/mincgen/genlib.c.o.d -o CMakeFiles/mincgen.dir/mincgen/genlib.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minclookup.dir/link.d CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -o minclookup -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 38%] Built target minclookup make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs 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progs/CMakeFiles/mincstats.dir/mincstats/mincstats.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincstats.dir/mincstats/mincstats.c.o -MF CMakeFiles/mincstats.dir/mincstats/mincstats.c.o.d -o 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progs/CMakeFiles/mincgen.dir/mincgen/getfill.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/getfill.c.o -MF CMakeFiles/mincgen.dir/mincgen/getfill.c.o.d -o 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c: In function 'create_output_file.constprop': -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:39: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 1 and 256 [-Wformat-overflow=] - 1454 | (void) sprintf(string, "%s%d", dimname, idim); - | ^~ -/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:36: note: directive argument in the range [0, 2147483647] - 1454 | (void) sprintf(string, "%s%d", dimname, idim); - | ^~~~~~ -In file included from /usr/include/stdio.h:970, - from /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:207: -In function 'sprintf', - inlined from 'create_output_file.constprop' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:20: -/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 2 and 266 bytes into a destination of size 256 - 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, - | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 31 | __glibc_objsize (__s), __fmt, - | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ - 32 | __va_arg_pack ()); - | ~~~~~~~~~~~~~~~~~ -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincdump.dir/link.d CMakeFiles/mincdump.dir/mincdump/mincdump.c.o CMakeFiles/mincdump.dir/mincdump/vardata.c.o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -o mincdump -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincinfo.dir/link.d CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -o mincinfo -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 44%] Built target mincinfo +[ 41%] Built target mincextract make -f progs/CMakeFiles/minctoraw.dir/build.make progs/CMakeFiles/minctoraw.dir/depend make[3]: Entering directory 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-I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minclookup.dir/link.d CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -o minclookup -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincwindow.dir/DependInfo.cmake "--color=" +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincmath.dir/link.d CMakeFiles/mincmath.dir/mincmath/mincmath.c.o -o mincmath -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/minctoraw.dir/build.make progs/CMakeFiles/minctoraw.dir/build -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/mincwindow.dir/build.make progs/CMakeFiles/mincwindow.dir/build +make -f progs/CMakeFiles/minctoraw.dir/build.make progs/CMakeFiles/minctoraw.dir/build +[ 41%] Built target mincmath +[ 42%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/node.c.o make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 44%] Built target minclookup make -f progs/CMakeFiles/mincmorph.dir/build.make progs/CMakeFiles/mincmorph.dir/depend -[ 45%] Building C object progs/CMakeFiles/minctoraw.dir/minctoraw/minctoraw.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/node.c.o -MF CMakeFiles/minccalc.dir/minccalc/node.c.o.d -o CMakeFiles/minccalc.dir/minccalc/node.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/node.c make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd 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mincmakescalar -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 43%] Building C object progs/CMakeFiles/minctoraw.dir/minctoraw/minctoraw.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgenyy.c.o -MF CMakeFiles/mincgen.dir/ncgenyy.c.o.d -o CMakeFiles/mincgen.dir/ncgenyy.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/ncgenyy.c +[ 43%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/init.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o -MF CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o.d -o CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincmorph/mincmorph.c -[ 46%] Linking C executable minccalc -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minc_modify_header.dir/link.d CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -o minc_modify_header -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minccalc.dir/link.txt --verbose=1 -[ 46%] Built target minc_modify_header make -f progs/CMakeFiles/mincsample.dir/build.make progs/CMakeFiles/mincsample.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincsample.dir/DependInfo.cmake "--color=" +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c: In function 'create_output_file.constprop': +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:39: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 1 and 256 [-Wformat-overflow=] + 1454 | (void) sprintf(string, "%s%d", dimname, idim); + | ^~ +/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:36: note: directive argument in the range [0, 2147483647] + 1454 | (void) sprintf(string, "%s%d", dimname, idim); + | ^~~~~~ +In file included from /usr/include/stdio.h:970, + from /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:207: +In function 'sprintf', + inlined from 'create_output_file.constprop' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:20: +/usr/include/aarch64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 2 and 266 bytes into a destination of size 256 + 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 31 | __glibc_objsize (__s), __fmt, + | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ + 32 | __va_arg_pack ()); + | ~~~~~~~~~~~~~~~~~ +[ 43%] Building C object progs/CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include 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progs/CMakeFiles/mincwindow.dir/mincwindow/mincwindow.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincwindow.dir/mincwindow/mincwindow.c.o -MF CMakeFiles/mincwindow.dir/mincwindow/mincwindow.c.o.d -o 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-lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 52%] Built target mincmath +[ 48%] Building C object progs/CMakeFiles/minctoraw.dir/Proglib/minc_endian.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minctoraw.dir/Proglib/minc_endian.c.o -MF CMakeFiles/minctoraw.dir/Proglib/minc_endian.c.o.d -o CMakeFiles/minctoraw.dir/Proglib/minc_endian.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib/minc_endian.c +[ 48%] Built target mincmakevector make -f progs/CMakeFiles/rawtominc.dir/build.make progs/CMakeFiles/rawtominc.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/rawtominc.dir/DependInfo.cmake "--color=" +make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/depend +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/voxeltoworld.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/rawtominc.dir/build.make progs/CMakeFiles/rawtominc.dir/build +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 53%] Building C object progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o +[ 49%] Building C object progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -MF CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o.d -o CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/rawtominc/rawtominc.c -[ 53%] Linking C executable minctoraw -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minctoraw.dir/link.txt --verbose=1 -[ 54%] Building C object progs/CMakeFiles/mincresample.dir/Proglib/convert_origin_to_start.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/Proglib/convert_origin_to_start.c.o -MF CMakeFiles/mincresample.dir/Proglib/convert_origin_to_start.c.o.d -o 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minccalc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 54%] Built target minccalc -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincwindow.dir/link.d CMakeFiles/mincwindow.dir/mincwindow/mincwindow.c.o -o mincwindow -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minc_modify_header.dir/link.d CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -o minc_modify_header -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/depend -[ 54%] Built target mincwindow -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/voxeltoworld.dir/DependInfo.cmake "--color=" +[ 50%] Building C object progs/CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -MF CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o.d -o CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/coordinates/voxeltoworld.c +[ 50%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/sym.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/sym.c.o -MF CMakeFiles/minccalc.dir/minccalc/sym.c.o.d -o CMakeFiles/minccalc.dir/minccalc/sym.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/sym.c +[ 50%] Built target minc_modify_header make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/depend -[ 55%] Linking C executable mincreshape make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/worldtovoxel.dir/DependInfo.cmake "--color=" -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/build -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincreshape.dir/link.txt --verbose=1 -[ 56%] Building C object progs/CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -MF CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o.d -o CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/coordinates/voxeltoworld.c +[ 50%] Linking C executable minctoraw +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minctoraw.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f progs/CMakeFiles/transformtags.dir/build.make progs/CMakeFiles/transformtags.dir/depend -[ 57%] Building C object progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o +[ 51%] Building C object progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o -MF CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o.d -o 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 58%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/getfill.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/getfill.c.o -MF CMakeFiles/mincgen.dir/mincgen/getfill.c.o.d -o CMakeFiles/mincgen.dir/mincgen/getfill.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/getfill.c -[ 59%] Building C object progs/CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/transformtags.dir/xfm/transformtags.c.o -MF CMakeFiles/transformtags.dir/xfm/transformtags.c.o.d -o CMakeFiles/transformtags.dir/xfm/transformtags.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/xfm/transformtags.c -[ 61%] Building C object progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -MF CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o.d -o CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincsample/mt19937ar.c -[ 62%] Linking C executable mincresample -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincresample.dir/link.txt --verbose=1 -[ 63%] Linking C executable voxeltoworld +[ 52%] Linking C executable mincwindow +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincwindow.dir/link.txt --verbose=1 +[ 53%] Linking C executable voxeltoworld cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/voxeltoworld.dir/link.txt --verbose=1 -[ 63%] Linking C executable worldtovoxel +[ 54%] Building C object progs/CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o -MF CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o.d -o CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincmorph/kernel_io.c +[ 55%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/vector.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/vector.c.o -MF CMakeFiles/minccalc.dir/minccalc/vector.c.o.d -o CMakeFiles/minccalc.dir/minccalc/vector.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/vector.c +[ 56%] Building C object progs/CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 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-ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/voxeltoworld.dir/link.d CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -o voxeltoworld -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 67%] Building C object progs/CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 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worldtovoxel make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/xfminvert.dir/build.make progs/CMakeFiles/xfminvert.dir/build -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincresample.dir/link.d CMakeFiles/mincresample.dir/mincresample/mincresample.c.o CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o CMakeFiles/mincresample.dir/Proglib/convert_origin_to_start.c.o -o mincresample -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 67%] Built target voxeltoworld -[ 67%] Built target worldtovoxel +[ 61%] Building C object progs/CMakeFiles/minccalc.dir/gram.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 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-rdynamic -Wl,--dependency-file=CMakeFiles/mincsample.dir/link.d CMakeFiles/mincsample.dir/mincsample/mincsample.c.o CMakeFiles/mincsample.dir/mincsample/mt19937ar.c.o -o mincsample -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 67%] Built target mincsample make -f progs/CMakeFiles/mincblob.dir/build.make progs/CMakeFiles/mincblob.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/mincblob.dir/DependInfo.cmake "--color=" -make -f progs/CMakeFiles/minccmp.dir/build.make progs/CMakeFiles/minccmp.dir/depend make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -MF CMakeFiles/mincblob.dir/mincblob/mincblob.c.o.d -o CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincblob/mincblob.c -[ 70%] Building C object progs/CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o +[ 68%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/load.c.o +cd 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Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 70%] Building C object progs/CMakeFiles/mincblob.dir/mincblob/mincblob.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -MF CMakeFiles/mincblob.dir/mincblob/mincblob.c.o.d -o CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincblob/mincblob.c +[ 70%] Built target transformtags +make -f progs/CMakeFiles/minccmp.dir/build.make progs/CMakeFiles/minccmp.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion/CMakeFiles/acr_nema.dir/DependInfo.cmake "--color=" +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/CMakeFiles/minccmp.dir/DependInfo.cmake "--color=" +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f progs/CMakeFiles/minccmp.dir/build.make progs/CMakeFiles/minccmp.dir/build -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o -MF CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o.d -o CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/xfm/xfminvert.c make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' [ 71%] Building C object progs/CMakeFiles/minccmp.dir/minccmp/minccmp.c.o cd 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccmp/minccmp.c +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/xfmconcat.dir/link.d CMakeFiles/xfmconcat.dir/xfm/xfmconcat.c.o -o xfmconcat -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make -f conversion/CMakeFiles/acr_nema.dir/build.make conversion/CMakeFiles/acr_nema.dir/build +[ 71%] Built target xfmconcat +make -f conversion/CMakeFiles/acr_nema.dir/build.make conversion/CMakeFiles/acr_nema.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 71%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/acr_io.c -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/transformtags.dir/link.d CMakeFiles/transformtags.dir/xfm/transformtags.c.o -o transformtags -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 71%] Linking C executable rawtominc -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/rawtominc.dir/link.txt --verbose=1 -[ 71%] Built target transformtags +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion/CMakeFiles/acr_nema.dir/DependInfo.cmake "--color=" make -f conversion/CMakeFiles/ecattominc.dir/build.make conversion/CMakeFiles/ecattominc.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion/CMakeFiles/ecattominc.dir/DependInfo.cmake "--color=" -[ 72%] Linking C executable xfminvert -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/xfminvert.dir/link.txt --verbose=1 +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +make -f conversion/CMakeFiles/acr_nema.dir/build.make conversion/CMakeFiles/acr_nema.dir/build +make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f conversion/CMakeFiles/ecattominc.dir/build.make conversion/CMakeFiles/ecattominc.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/rawtominc.dir/link.d CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -o rawtominc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 72%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecattominc.c +[ 72%] Built target rawtominc make -f conversion/CMakeFiles/minctoecat.dir/build.make conversion/CMakeFiles/minctoecat.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion/CMakeFiles/minctoecat.dir/DependInfo.cmake "--color=" -[ 73%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecattominc.c +[ 72%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/acr_io.c make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' make -f conversion/CMakeFiles/minctoecat.dir/build.make conversion/CMakeFiles/minctoecat.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 74%] Building C object conversion/CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o +[ 73%] Building C object conversion/CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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+/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minccalc.dir/link.d CMakeFiles/minccalc.dir/minccalc/minccalc.c.o CMakeFiles/minccalc.dir/minccalc/eval.c.o CMakeFiles/minccalc.dir/minccalc/ident.c.o CMakeFiles/minccalc.dir/minccalc/node.c.o CMakeFiles/minccalc.dir/minccalc/optim.c.o CMakeFiles/minccalc.dir/minccalc/scalar.c.o CMakeFiles/minccalc.dir/minccalc/sym.c.o CMakeFiles/minccalc.dir/minccalc/vector.c.o CMakeFiles/minccalc.dir/lex.c.o CMakeFiles/minccalc.dir/gram.c.o -o minccalc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +[ 79%] Building C object conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o +/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c: In function 'main': +/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c:204:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] + 204 | fread(&ana_hdr, sizeof (ana_hdr), 1, fp); + | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 81%] Linking C executable mincmorph -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmorph.dir/link.txt --verbose=1 -[ 81%] Built target xfminvert -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/rawtominc.dir/link.d CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -o rawtominc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -MF CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o.d -o CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c +[ 79%] Built target minccalc +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincgen.dir/link.d CMakeFiles/mincgen.dir/mincgen/main.c.o CMakeFiles/mincgen.dir/ncgentab.c.o CMakeFiles/mincgen.dir/ncgenyy.c.o CMakeFiles/mincgen.dir/mincgen/escapes.c.o CMakeFiles/mincgen.dir/mincgen/genlib.c.o CMakeFiles/mincgen.dir/mincgen/getfill.c.o CMakeFiles/mincgen.dir/mincgen/init.c.o CMakeFiles/mincgen.dir/mincgen/load.c.o -o mincgen -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 82%] Linking C executable minccmp -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minccmp.dir/link.txt --verbose=1 +[ 79%] Built target mincgen +[ 80%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/dicom_client_routines.c +[ 81%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include 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/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: note: in expansion of macro 'VERSIONSTR' 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ -[ 83%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/dicom_network.c -[ 83%] Built target rawtominc +[ 81%] Linking C executable mincblob +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincblob.dir/link.txt --verbose=1 +[ 82%] Linking C executable minccmp +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minccmp.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mincstats.dir/link.d CMakeFiles/mincstats.dir/mincstats/mincstats.c.o -o mincstats -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[ 83%] Linking C executable mincresample +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincresample.dir/link.txt --verbose=1 +[ 83%] Built target mincstats [ 84%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/element.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/element.c [ 85%] Linking C executable nii2mnc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/nii2mnc.dir/link.txt --verbose=1 -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection 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-Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/file_io.c [ 85%] Linking C executable mnc2nii -[ 85%] Built target mincstats cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/mnc2nii.dir/link.txt --verbose=1 -[ 85%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o [ 86%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration 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-Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lm -lz -ldl -lnetcdf -lniftiio -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 91%] Built target nii2mnc -[ 91%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/message.c.o +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard 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-fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/group.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/group.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/group.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/group.c [ 91%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/value_repr.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/value_repr.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/value_repr.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/value_repr.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/value_repr.c [ 91%] Linking C executable upet2mnc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/upet2mnc.dir/link.txt --verbose=1 +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/nii2mnc.dir/link.d CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -o nii2mnc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lm -lz -ldl -lnetcdf -lniftiio +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/mnc2nii.dir/link.d CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o -o mnc2nii -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lniftiio -lm -lminc2 -lm -lz -ldl -lnetcdf -lniftiio make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' [ 91%] Built target mnc2nii -[ 92%] Linking C executable ecattominc -cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/ecattominc.dir/link.txt --verbose=1 -[ 93%] Linking C executable minctoecat +[ 91%] Built target nii2mnc +[ 92%] Linking C executable minctoecat cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/minctoecat.dir/link.txt --verbose=1 +[ 93%] Linking C executable ecattominc +cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/ecattominc.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/upet2mnc.dir/link.d CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -o upet2mnc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 93%] Built target upet2mnc -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/ecattominc.dir/link.d CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -o ecattominc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' [ 94%] Linking C static library libacr_nema.a +[ 94%] Built target upet2mnc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -P CMakeFiles/acr_nema.dir/cmake_clean_target.cmake -[ 94%] Built target ecattominc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/acr_nema.dir/link.txt --verbose=1 /usr/bin/ar qc libacr_nema.a CMakeFiles/acr_nema.dir/Acr_nema/acr_io.c.o CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o CMakeFiles/acr_nema.dir/Acr_nema/dicom_network.c.o CMakeFiles/acr_nema.dir/Acr_nema/element.c.o CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o CMakeFiles/acr_nema.dir/Acr_nema/globals.c.o CMakeFiles/acr_nema.dir/Acr_nema/group.c.o CMakeFiles/acr_nema.dir/Acr_nema/message.c.o CMakeFiles/acr_nema.dir/Acr_nema/value_repr.c.o /usr/bin/ranlib libacr_nema.a @@ -1856,25 +1889,27 @@ make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion/CMakeFiles/dcm2mnc.dir/DependInfo.cmake "--color=" -/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minctoecat.dir/link.d CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o -o minctoecat -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' -[ 94%] Built target minctoecat make -f conversion/CMakeFiles/dcm2mnc.dir/build.make conversion/CMakeFiles/dcm2mnc.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' [ 95%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -[ 96%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_to_minc.c +[ 96%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -[ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c -[ 98%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o +[ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/siemens_to_dicom.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_read.c +[ 98%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/minctoecat.dir/link.d CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o -o minctoecat -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' [ 99%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/progress.c [100%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o +/usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/aarch64-linux-gnu/hdf5/serial -rdynamic -Wl,--dependency-file=CMakeFiles/ecattominc.dir/link.d CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -o ecattominc -L/usr/lib/aarch64-linux-gnu/lib -Wl,-rpath,/usr/lib/aarch64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf +make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' +[100%] Built target minctoecat cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/aarch64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/string_to_filename.c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, @@ -1885,6 +1920,7 @@ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: note: in expansion of macro 'VERSION_STRING' 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ +[100%] Built target ecattominc /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function 'is_cdexport_file': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1019:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1019 | fread(tst_str, 1, DICM_MAGIC_SIZE, fp); @@ -1981,57 +2017,57 @@ 6: MINCEXTRACT_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu/progs/mincextract 6: Test timeout computed to be: 1500 1: Case 1 - Test the essential command line options. -1: Case 2 - test operation with no command-line options. 2: Case 1 - Basic output. 3: Processing:...Done 2: Case 2 - Test the sum and sum2 options. 5: Transforming slices:.....Done -4: Case 1...OK -2: Case 3 - Test the mean option. -5: Transforming slices:.....Done +1: Case 2 - test operation with no command-line options. 3: Normalizing:..Done +2: Case 3 - Test the mean option. 3: Processing:...Done +4: Case 1...OK 1: Case 3 - test the dimnames option. -5: OK. -1/6 Test #5: mincresample-test ................ Passed 0.13 sec -4: Case 2...OK -1: Case 4 - test the varnames option. -2: Case 4 - Test the stddev and variance options. +5: Transforming slices:.....Done 3: OK. -2/6 Test #3: mincaverage-test ................. Passed 0.18 sec +2: Case 4 - Test the stddev and variance options. +1/6 Test #3: mincaverage-test ................. Passed 0.18 sec +1: Case 4 - test the varnames option. 2: Case 5 - Test the min and max options. +5: OK. +2/6 Test #5: mincresample-test ................ Passed 0.20 sec +4: Case 2...OK 1: Case 5 - test the dimlength option. -4: Case 3...OK -1: Case 6 - test the vartype option. 2: Case 6 - Test the CoM option. +1: Case 6 - test the vartype option. 2: Case 7 - Test the median and entropy options. 1: Case 7 - test the vardims option. -4: Case 4...OK -1: Case 8 - test the varatts option. 2: Case 8 - Test the histogram option. -1: Case 9 - test the varatts option. -4: Case 5...OK...OK +4: Case 3...OK +1: Case 8 - test the varatts option. 2: Case 9 - Test the integer histogram option. +1: Case 9 - test the varatts option. +2: OK. +3/6 Test #2: mincstats-test ................... Passed 0.41 sec +4: Case 4...OK 1: Case 10 - test the atttype option. 1: Case 11 - test the attvalue option. -2: OK. -3/6 Test #2: mincstats-test ................... Passed 0.42 sec 1: Case 12 - test the minc_version option. +4: Case 5...OK...OK 1: Case 13 - test the error_string option. 1: OK. -4/6 Test #1: mincinfo-test .................... Passed 0.50 sec +4/6 Test #1: mincinfo-test .................... Passed 0.60 sec 4: Case 6...OK...OK...OK +6: OK. +5/6 Test #6: mincreshape-test ................. Passed 0.66 sec 4: Case 7...OK 4: Case 8...OK 4: Case 9...OK 4: No errors detected. -5/6 Test #4: minccalc-test .................... Passed 0.71 sec -6: OK. -6/6 Test #6: mincreshape-test ................. Passed 0.88 sec +6/6 Test #4: minccalc-test .................... Passed 0.82 sec 100% tests passed, 0 tests failed out of 6 -Total Test time (real) = 0.92 sec +Total Test time (real) = 0.85 sec make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep @@ -2202,8 +2238,8 @@ dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb -dpkg-deb: building package 'minc-tools' in '../minc-tools_2.3.00+dfsg-12_arm64.deb'. dpkg-deb: building package 'minc-tools-dbgsym' in '../minc-tools-dbgsym_2.3.00+dfsg-12_arm64.deb'. +dpkg-deb: building package 'minc-tools' in '../minc-tools_2.3.00+dfsg-12_arm64.deb'. dpkg-genbuildinfo --build=binary -O../minc-tools_2.3.00+dfsg-12_arm64.buildinfo dpkg-genchanges --build=binary -O../minc-tools_2.3.00+dfsg-12_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -2211,12 +2247,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/4056466/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/810637 and its subdirectories -I: Current time: Mon Feb 17 05:54:21 -12 2025 -I: pbuilder-time-stamp: 1739814861 +I: removing directory /srv/workspace/pbuilder/4056466 and its subdirectories +I: Current time: Mon Mar 23 14:19:14 +14 2026 +I: pbuilder-time-stamp: 1774225154