Diff of the two buildlogs: -- --- b1/build.log 2025-10-13 03:17:18.422544839 +0000 +++ b2/build.log 2025-10-13 05:04:55.330509758 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Sat Nov 14 19:05:48 -12 2026 -I: pbuilder-time-stamp: 1794726348 +I: Current time: Mon Oct 13 17:17:39 +14 2025 +I: pbuilder-time-stamp: 1760325459 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,53 +25,85 @@ dpkg-source: info: applying d52aea6f5599e85a0535c3f8a344aed2fa8a7e22.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3845555/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/D01_modify_environment starting +debug: Running on codethink04-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 13 03:17 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='3d4d545d410b49d584e62b8cc7388b78' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3845555' - PS1='# ' - PS2='> ' + INVOCATION_ID=24466405558f4f9c9d836abbfc77f3c8 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=358475 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iPrqRkiZ/pbuilderrc_Y8qi --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iPrqRkiZ/b1 --logfile b1/build.log ncbi-igblast_1.20.0-3.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.iPrqRkiZ/pbuilderrc_Uafp --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.iPrqRkiZ/b2 --logfile b2/build.log ncbi-igblast_1.20.0-3.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3845555/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -169,7 +201,7 @@ Get: 48 http://deb.debian.org/debian unstable/main arm64 libncbi-wvdb-dev arm64 3.2.1+dfsg-2 [1269 kB] Get: 49 http://deb.debian.org/debian unstable/main arm64 libncbi-vdb-dev arm64 3.2.1+dfsg-2 [1572 kB] Get: 50 http://deb.debian.org/debian unstable/main arm64 time arm64 1.9-0.3 [48.0 kB] -Fetched 20.1 MB in 1s (28.6 MB/s) +Fetched 20.1 MB in 0s (130 MB/s) Preconfiguring packages ... Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19958 files and directories currently installed.) @@ -384,7 +416,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-3_source.changes +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/ncbi-igblast-1.20.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../ncbi-igblast_1.20.0-3_source.changes dpkg-buildpackage: info: source package ncbi-igblast dpkg-buildpackage: info: source version 1.20.0-3 dpkg-buildpackage: info: source distribution unstable @@ -412,74 +448,74 @@ done ) ; \ ) ; \ done -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: ../../../GCC*/build/new_module.sh: not found -/bin/sh: 6: 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../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory +/bin/sh: line 6: ../../../GCC*/build/new_module.sh: No such file or directory make[1]: [debian/rules:40: override_dh_clean] Error 127 (ignored) rm -rf c++/compilers/dll c++/config.log c++/Makefile c++/GCC* rm -f c++/configure.lineno c++/src/objects/blastxml/blastxml.module @@ -987,7 +1023,7 @@ checking for libungif... no checking for libXpm... no checking for freetype-config... no -./src/build-system/configure: line 29815: cd: /nonexistent/first-build: No such file or directory +/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/configure: line 29815: cd: /nonexistent/second-build: No such file or directory checking for libftgl... no checking for libmagic... no checking for libmimetic... no @@ -1274,7 +1310,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c. gcc -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DNCBI_APP_BUILT_AS=run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/helpers/run_with_lock.c -o run_with_lock.o gcc -Wl,-z,relro run_with_lock.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -o run_with_lock -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f run_with_lock /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/run_with_lock make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' @@ -5531,7 +5567,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/ncbi_pool_balancer.cpp -o ncbi_pool_balancer.o /bin/rm -f libxncbi.a .libxncbi.a.stamp ar cr libxncbi.a ncbi_os_unix.o blob_storage.o ddumpable.o env_reg.o metareg.o ncbi_config.o ncbi_param.o ncbi_process.o ncbi_safe_static.o ncbi_signal.o ncbi_stack.o ncbi_system.o ncbiapp.o ncbiargs.o ncbiatomic.o ncbicfg.o ncbidbg.o ncbidiag.o ncbidiag_p.o ncbidll.o ncbienv.o ncbiexec.o ncbiexpt.o ncbifile.o ncbimempool.o ncbimtx.o ncbiobj.o ncbireg.o ncbistr.o ncbistre.o ncbithr.o ncbitime.o obj_store.o plugin_manager.o plugin_manager_store.o rwstreambuf.o stream_utils.o syslog.o version.o request_ctx.o request_control.o expr.o ncbi_strings.o resource_info.o interprocess_lock.o ncbi_autoinit.o perf_log.o ncbi_toolkit.o ncbierror.o ncbi_url.o ncbi_cookies.o guard.o ncbi_message.o request_status.o ncbi_fast.o ncbi_dbsvcmapper.o ncbi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxncbi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxncbi.a /bin/ln -f .xncbi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xncbi.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' @@ -5722,7 +5758,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/corelib/test_mt.cpp -o test_mt.o /bin/rm -f libtest_mt.a .libtest_mt.a.stamp ar cr libtest_mt.a test_mt.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtest_mt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtest_mt.a /bin/ln -f .test_mt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.test_mt.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' @@ -8939,7 +8975,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/crc32_sse.cpp -o crc32_sse.o /bin/rm -f libxutil.a .libxutil.a.stamp ar cr libxutil.a random_gen.o utf8.o checksum.o checksum_cityhash.o checksum_farmhash.o bytesrc.o strbuffer.o itree.o smalldns.o thread_pool_old.o ddump_viewer.o strsearch.o logrotate.o format_guess.o ascii85.o md5.o file_obsolete.o unicode.o dictionary.o dictionary_util.o thread_nonstop.o sgml_entity.o static_set.o transmissionrw.o miscmath.o mutex_pool.o ncbi_cache.o line_reader.o util_exception.o uttp.o multi_writer.o itransaction.o thread_pool.o thread_pool_ctrl.o scheduler.o distribution.o rangelist.o util_misc.o histogram_binning.o table_printer.o retry_ctx.o stream_source.o file_manifest.o cache_async.o multipattern_search.o crc32_sse.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxutil.a /bin/ln -f .xutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xutil.dep make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' @@ -9014,7 +9050,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -DHAVE_CONFIG_H -DPCRE_NO_UTF16 -DPCRE_NO_UTF32 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcreposix.c -o pcreposix.o /bin/rm -f libregexp.a .libregexp.a.stamp ar cr libregexp.a pcre_byte_order.o pcre_chartables.o pcre_compile.o pcre_config.o pcre_dfa_exec.o pcre_exec.o pcre_fullinfo.o pcre_get.o pcre_globals.o pcre_jit_compile.o pcre_maketables.o pcre_newline.o pcre_ord2utf8.o pcre_refcount.o pcre_string_utils.o pcre_study.o pcre_tables.o pcre_ucd.o pcre_valid_utf8.o pcre_version.o pcre_xclass.o pcreposix.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libregexp.a /bin/ln -f .regexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.regexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -9025,7 +9061,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcretest.c -o pcretest.o /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/.. -DHAVE_CONFIG_H -DSUPPORT_PCRE8 -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/regexp/pcre_printint.c -o pcre_printint.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 pcretest.o pcre_printint.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lregexp -o test_pcre -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f test_pcre /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/test_pcre make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -9329,7 +9365,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/convert_dates_iso8601.cpp -o convert_dates_iso8601.o /bin/rm -f libxregexp.a .libxregexp.a.stamp ar cr libxregexp.a regexp.o arg_regexp.o mask_regexp.o convert_dates_iso8601.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxregexp.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxregexp.a /bin/ln -f .xregexp.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xregexp.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' @@ -9408,7 +9444,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/xregexp/regexp_template_tester.cpp -o regexp_template_tester.o /bin/rm -f libxregexp_template_tester.a .libxregexp_template_tester.a.stamp ar cr libxregexp_template_tester.a regexp_template_tester.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxregexp_template_tester.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxregexp_template_tester.a /bin/ln -f .xregexp_template_tester.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xregexp_template_tester.dep make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' @@ -13973,7 +14009,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/mac_prj_generator.cpp -o mac_prj_generator.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/prj_file_collector.cpp -o prj_file_collector.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 file_contents.o msvc_configure.o msvc_makefile.o msvc_masterproject_generator.o msvc_prj_generator.o msvc_prj_utils.o msvc_project_context.o msvc_site.o msvc_sln_generator.o proj_builder_app.o proj_datatool_generated_src.o proj_item.o proj_tree.o proj_tree_builder.o proj_src_resolver.o proj_utils.o resolver.o msvc_configure_prj_generator.o proj_projects.o msvc_dlls_info.o msvc_prj_files_collector.o configurable_file.o ptb_gui.o ptb_registry.o mac_prj_generator.o prj_file_collector.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lxutil -lxncbi -lxregexp -lregexp -lm -lpthread -o project_tree_builder -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f project_tree_builder /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/project_tree_builder make[3]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[2]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' @@ -17540,7 +17576,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/rpcbase.cpp -o rpcbase.o /bin/rm -f libxser.a .libxser.a.stamp ar cr libxser.a hookdata.o hookdatakey.o typeinfo.o objectinfo.o objectiter.o objectio.o typeref.o typemap.o stdtypes.o enumerated.o ptrinfo.o autoptrinfo.o continfo.o stltypes.o memberid.o memberlist.o item.o classinfob.o member.o classinfo.o variant.o choice.o choiceptr.o aliasinfo.o objistr.o objostr.o objcopy.o iterator.o serial.o delaybuf.o pack_string.o exception.o objhook.o objlist.o objstack.o objostrasn.o objistrasn.o objostrasnb.o objistrasnb.o objostrxml.o objistrxml.o objostrjson.o objistrjson.o serializable.o serialobject.o pathhook.o rpcbase.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxser.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxser.a /bin/ln -f .xser.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xser.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' @@ -21994,7 +22030,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_node.cpp -o traversal_node.o /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/serial/datatool/traversal_spec_file_parser.cpp -o traversal_spec_file_parser.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 datatool.o type.o namespace.o statictype.o enumtype.o reftype.o unitype.o blocktype.o choicetype.o typestr.o ptrstr.o stdstr.o classstr.o enumstr.o stlstr.o choicestr.o choiceptrstr.o value.o mcontainer.o module.o moduleset.o generate.o filecode.o code.o fileutil.o alexer.o aparser.o parser.o lexer.o exceptions.o comments.o srcutil.o dtdaux.o dtdlexer.o dtdparser.o rpcgen.o aliasstr.o xsdlexer.o xsdparser.o wsdllexer.o wsdlparser.o wsdlstr.o jsdlexer.o jsdparser.o traversal_pattern_match_callback.o traversal_code_generator.o traversal_merger.o traversal_node.o traversal_spec_file_parser.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lxser -lxutil -lxncbi -lm -lpthread -o datatool -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f datatool /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' @@ -22088,7 +22124,7 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll && /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/new_module.sh gencoll_client all Waiting for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock. -Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 4020534 (make_asn) +Acquired /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/make_asn.lock for PID 841751 (make_asn) /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/Makefile.module MODULE=gencoll_client MODULE_PATH=objects/genomecoll MODULE_ASN=gencoll_client.asn MODULE_IMPORT='objects/genomecoll/genome_collection' IMPDEPS='/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection.asn' IMPFILES='objects/genomecoll/genome_collection.asn' top_srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++ builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build DATATOOL=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool DATATOOL_WRAPPER='' MODULE_SEARCH=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src all make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll' /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/datatool -oR /build/reproducible-path/ncbi-igblast-1.20.0/c++ \ @@ -23295,7 +23331,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/align_format/aln_printer.cpp -o aln_printer.o /bin/rm -f libalign_format.a .libalign_format.a.stamp ar cr libalign_format.a format_flags.o align_format_util.o showdefline.o showalign.o tabular.o vectorscreen.o seqalignfilter.o taxFormat.o aln_printer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libalign_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libalign_format.a /bin/ln -f .align_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.align_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format' @@ -23524,7 +23560,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/biblio/citation_base.cpp -o citation_base.o /bin/rm -f libbiblio.a .libbiblio.a.stamp ar cr libbiblio.a biblio__.o biblio___.o citation_base.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libbiblio.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libbiblio.a /bin/ln -f .biblio.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.biblio.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' @@ -23534,22 +23570,22 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.legacy_blast builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/legacy_blast.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/legacy_blast.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.update_blastdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/update_blastdb.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/update_blastdb.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.get_species_taxids builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/get_species_taxids.sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/get_species_taxids.sh make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/Makefile.cleanup-blastdb-volumes builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/cleanup-blastdb-volumes.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/cleanup-blastdb-volumes.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -23686,7 +23722,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/blast/blast_app_util.cpp -o blast_app_util.o /bin/rm -f libblast_app_util.a .libblast_app_util.a.stamp ar cr libblast_app_util.a blast_app_util.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_app_util.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_app_util.a /bin/ln -f .blast_app_util.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_app_util.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -23786,7 +23822,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/services/blast_services.cpp -o blast_services.o /bin/rm -f libblast_services.a .libblast_services.a.stamp ar cr libblast_services.a blast_services.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_services.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_services.a /bin/ln -f .blast_services.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_services.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' @@ -23882,7 +23918,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blast_sra_input/blast_sra_input.cpp -o blast_sra_input.o /bin/rm -f libblast_sra_input.a .libblast_sra_input.a.stamp ar cr libblast_sra_input.a blast_sra_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblast_sra_input.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblast_sra_input.a /bin/ln -f .blast_sra_input.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blast_sra_input.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' @@ -24042,7 +24078,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastdb/blastdb___.cpp -o blastdb___.o /bin/rm -f libblastdb.a .libblastdb.a.stamp ar cr libblastdb.a blastdb__.o blastdb___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastdb.a /bin/ln -f .blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' @@ -24409,7 +24445,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/blastdb_format/seq_formatter.cpp -o seq_formatter.o /bin/rm -f libblastdb_format.a .libblastdb_format.a.stamp ar cr libblastdb_format.a seq_writer.o blastdb_dataextract.o blastdb_formatter.o seq_formatter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastdb_format.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastdb_format.a /bin/ln -f .blastdb_format.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastdb_format.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format' @@ -26156,7 +26192,7 @@ -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/blastinput/blast_asn1_input.cpp -o blast_asn1_input.o /bin/rm -f libblastinput.a .libblastinput.a.stamp ar cr libblastinput.a blast_input.o blast_fasta_input.o blast_scope_src.o blast_args.o cmdline_flags.o blast_input_aux.o blastp_args.o blastn_args.o rmblastn_args.o blastx_args.o tblastn_args.o tblastx_args.o psiblast_args.o rpsblast_args.o rpstblastn_args.o igblastn_args.o igblastp_args.o deltablast_args.o magicblast_args.o kblastp_args.o blast_asn1_input.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastinput.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastinput.a /bin/ln -f .blastinput.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastinput.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' @@ -26339,7 +26375,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml/blastxml___.cpp -o blastxml___.o /bin/rm -f libblastxml.a .libblastxml.a.stamp ar cr libblastxml.a blastxml__.o blastxml___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastxml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastxml.a /bin/ln -f .blastxml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastxml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' @@ -26522,7 +26558,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blastxml2/blastxml2___.cpp -o blastxml2___.o /bin/rm -f libblastxml2.a .libblastxml2.a.stamp ar cr libblastxml2.a blastxml2__.o blastxml2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libblastxml2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libblastxml2.a /bin/ln -f .blastxml2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.blastxml2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' @@ -26561,7 +26597,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/composition_adjustment/unified_pvalues.c -o unified_pvalues.o /bin/rm -f libcomposition_adjustment.a .libcomposition_adjustment.a.stamp ar cr libcomposition_adjustment.a compo_heap.o compo_mode_condition.o composition_adjustment.o matrix_frequency_data.o nlm_linear_algebra.o optimize_target_freq.o redo_alignment.o smith_waterman.o unified_pvalues.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libcomposition_adjustment.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libcomposition_adjustment.a /bin/ln -f .composition_adjustment.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.composition_adjustment.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' @@ -28425,12 +28461,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/dbapi_pool_balancer.cpp -o dbapi_pool_balancer.o /bin/rm -f libdbapi_driver.a .libdbapi_driver.a.stamp ar cr libdbapi_driver.a handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libdbapi_driver.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libdbapi_driver.a /bin/ln -f .dbapi_driver.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.dbapi_driver.dep /bin/rm -f libdbapi_driver-dll.so .libdbapi_driver-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libdbapi_driver-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC handle_stack.o numeric_convert.o parameters.o exception.o interfaces.o public.o types.o memory_store.o pointer_pot.o driver_mgr.o dbapi_driver_conn_mgr.o dbapi_conn_factory.o dbapi_svc_mapper.o dbapi_driver_utils.o dbapi_impl_cmd.o dbapi_impl_connection.o dbapi_impl_context.o dbapi_impl_result.o dbapi_driver_conn_params.o dbapi_driver_exception_storage.o dbapi_object_convert.o dbapi_driver_convert.o dbapi_pool_balancer.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libdbapi_driver-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libdbapi_driver-dll.so /bin/ln -f .dbapi_driver-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.dbapi_driver-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver' @@ -28642,7 +28678,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/efetch/efetch___.cpp -o efetch___.o /bin/rm -f libefetch.a .libefetch.a.stamp ar cr libefetch.a efetch__.o efetch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libefetch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libefetch.a /bin/ln -f .efetch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.efetch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' @@ -28825,7 +28861,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/egquery/egquery___.cpp -o egquery___.o /bin/rm -f libegquery.a .libegquery.a.stamp ar cr libegquery.a egquery__.o egquery___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libegquery.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libegquery.a /bin/ln -f .egquery.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.egquery.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' @@ -29008,7 +29044,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/ehistory/ehistory___.cpp -o ehistory___.o /bin/rm -f libehistory.a .libehistory.a.stamp ar cr libehistory.a ehistory__.o ehistory___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libehistory.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libehistory.a /bin/ln -f .ehistory.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ehistory.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' @@ -29191,7 +29227,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/einfo/einfo___.cpp -o einfo___.o /bin/rm -f libeinfo.a .libeinfo.a.stamp ar cr libeinfo.a einfo__.o einfo___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libeinfo.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libeinfo.a /bin/ln -f .einfo.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.einfo.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' @@ -29374,7 +29410,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/elink/elink___.cpp -o elink___.o /bin/rm -f libelink.a .libelink.a.stamp ar cr libelink.a elink__.o elink___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libelink.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libelink.a /bin/ln -f .elink.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.elink.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' @@ -29557,7 +29593,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/epost/epost___.cpp -o epost___.o /bin/rm -f libepost.a .libepost.a.stamp ar cr libepost.a epost__.o epost___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libepost.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libepost.a /bin/ln -f .epost.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.epost.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' @@ -29740,7 +29776,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esearch/esearch___.cpp -o esearch___.o /bin/rm -f libesearch.a .libesearch.a.stamp ar cr libesearch.a esearch__.o esearch___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libesearch.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libesearch.a /bin/ln -f .esearch.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.esearch.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' @@ -29923,7 +29959,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/espell/espell___.cpp -o espell___.o /bin/rm -f libespell.a .libespell.a.stamp ar cr libespell.a espell__.o espell___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libespell.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libespell.a /bin/ln -f .espell.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.espell.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' @@ -30107,7 +30143,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/esummary/esummary___.cpp -o esummary___.o /bin/rm -f libesummary.a .libesummary.a.stamp ar cr libesummary.a esummary__.o esummary___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libesummary.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libesummary.a /bin/ln -f .esummary.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.esummary.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' @@ -30914,7 +30950,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/api/ehistory.cpp -o ehistory.o /bin/rm -f libeutils.a .libeutils.a.stamp ar cr libeutils.a eutils.o efetch.o einfo.o esearch.o egquery.o epost.o elink.o esummary.o espell.o ehistory.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libeutils.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libeutils.a /bin/ln -f .eutils.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.eutils.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' @@ -31096,7 +31132,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/gbseq/gbseq___.cpp -o gbseq___.o /bin/rm -f libgbseq.a .libgbseq.a.stamp ar cr libgbseq.a gbseq__.o gbseq___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgbseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgbseq.a /bin/ln -f .gbseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.gbseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' @@ -31322,7 +31358,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=GENEINFO -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/gene_info_reader/file_utils.cpp -o file_utils.o /bin/rm -f libgene_info.a .libgene_info.a.stamp ar cr libgene_info.a gene_info.o gene_info_reader.o file_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgene_info.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgene_info.a /bin/ln -f .gene_info.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.gene_info.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' @@ -31576,7 +31612,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/general/uoconv.cpp -o uoconv.o /bin/rm -f libgeneral.a .libgeneral.a.stamp ar cr libgeneral.a general__.o general___.o uoconv.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgeneral.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgeneral.a /bin/ln -f .general.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.general.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' @@ -31743,7 +31779,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/genomecoll/genome_collection___.cpp -o genome_collection___.o /bin/rm -f libgenome_collection.a .libgenome_collection.a.stamp ar cr libgenome_collection.a genome_collection__.o genome_collection___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libgenome_collection.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libgenome_collection.a /bin/ln -f .genome_collection.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.genome_collection.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' @@ -31903,7 +31939,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id1/id1___.cpp -o id1___.o /bin/rm -f libid1.a .libid1.a.stamp ar cr libid1.a id1__.o id1___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libid1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libid1.a /bin/ln -f .id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.id1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' @@ -32063,7 +32099,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/id2/id2___.cpp -o id2___.o /bin/rm -f libid2.a .libid2.a.stamp ar cr libid2.a id2__.o id2___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libid2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libid2.a /bin/ln -f .id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.id2.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' @@ -32166,7 +32202,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/igblast/igblast.cpp -o igblast.o /bin/rm -f libigblast.a .libigblast.a.stamp ar cr libigblast.a igblast.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libigblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libigblast.a /bin/ln -f .igblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.igblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/igblast' @@ -32348,7 +32384,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medlars/medlars___.cpp -o medlars___.o /bin/rm -f libmedlars.a .libmedlars.a.stamp ar cr libmedlars.a medlars__.o medlars___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmedlars.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmedlars.a /bin/ln -f .medlars.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.medlars.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' @@ -32508,7 +32544,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/medline/medline___.cpp -o medline___.o /bin/rm -f libmedline.a .libmedline.a.stamp ar cr libmedline.a medline__.o medline___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmedline.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmedline.a /bin/ln -f .medline.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.medline.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' @@ -32697,7 +32733,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla___.cpp -o mla___.o /bin/rm -f libmla.a .libmla.a.stamp ar cr libmla.a mla__.o mla___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmla.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmla.a /bin/ln -f .mla.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.mla.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' @@ -32862,7 +32898,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/mla/mla_client_.cpp -o mla_client_.o /bin/rm -f libmlacli.a .libmlacli.a.stamp ar cr libmlacli.a mla_client.o mla_client_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libmlacli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libmlacli.a /bin/ln -f .mlacli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.mlacli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' @@ -33126,7 +33162,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/local_blastdb_adapter.cpp -o local_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb.a .libncbi_xloader_blastdb.a.stamp ar cr libncbi_xloader_blastdb.a bdbloader.o cached_sequence.o local_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_blastdb.a /bin/ln -f .ncbi_xloader_blastdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_blastdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33292,7 +33328,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/blastdb/remote_blastdb_adapter.cpp -o remote_blastdb_adapter.o /bin/rm -f libncbi_xloader_blastdb_rmt.a .libncbi_xloader_blastdb_rmt.a.stamp ar cr libncbi_xloader_blastdb_rmt.a bdbloader_rmt.o remote_blastdb_adapter.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_blastdb_rmt.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_blastdb_rmt.a /bin/ln -f .ncbi_xloader_blastdb_rmt.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_blastdb_rmt.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' @@ -33452,7 +33488,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pub/pub___.cpp -o pub___.o /bin/rm -f libpub.a .libpub.a.stamp ar cr libpub.a pub__.o pub___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpub.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpub.a /bin/ln -f .pub.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.pub.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' @@ -35381,7 +35417,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seq/seq_loc_reverse_complementer.cpp -o seq_loc_reverse_complementer.o /bin/rm -f libseq.a .libseq.a.stamp ar cr libseq.a seq__.o seqalign__.o seqblock__.o seqfeat__.o seqloc__.o seqres__.o seqtable__.o seq___.o seqalign___.o seqblock___.o seqfeat___.o seqloc___.o seqres___.o seqtable___.o seqport_util.o seq_id_tree.o seq_id_handle.o seq_id_mapper.o seq_loc_mapper_base.o seq_align_mapper_base.o seqlocinfo.o so_map.o seq_loc_from_string.o seq_loc_reverse_complementer.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseq.a /bin/ln -f .seq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' @@ -35541,7 +35577,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqcode/seqcode___.cpp -o seqcode___.o /bin/rm -f libseqcode.a .libseqcode.a.stamp ar cr libseqcode.a seqcode__.o seqcode___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqcode.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqcode.a /bin/ln -f .seqcode.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqcode.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' @@ -35701,7 +35737,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqedit/seqedit___.cpp -o seqedit___.o /bin/rm -f libseqedit.a .libseqedit.a.stamp ar cr libseqedit.a seqedit__.o seqedit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqedit.a /bin/ln -f .seqedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' @@ -35943,7 +35979,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqset/gb_release_file.cpp -o gb_release_file.o /bin/rm -f libseqset.a .libseqset.a.stamp ar cr libseqset.a seqset__.o seqset___.o gb_release_file.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqset.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqset.a /bin/ln -f .seqset.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqset.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' @@ -36103,7 +36139,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/seqsplit/seqsplit___.cpp -o seqsplit___.o /bin/rm -f libseqsplit.a .libseqsplit.a.stamp ar cr libseqsplit.a seqsplit__.o seqsplit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqsplit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqsplit.a /bin/ln -f .seqsplit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqsplit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' @@ -36534,7 +36570,7 @@ u++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/sequtil/sequtil_shared.cpp -o sequtil_shared.o /bin/rm -f libsequtil.a .libsequtil.a.stamp ar cr libsequtil.a sequtil.o sequtil_convert.o sequtil_convert_imp.o sequtil_manip.o sequtil_tables.o sequtil_shared.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsequtil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsequtil.a /bin/ln -f .sequtil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sequtil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' @@ -36694,7 +36730,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/submit/submit___.cpp -o submit___.o /bin/rm -f libsubmit.a .libsubmit.a.stamp ar cr libsubmit.a submit__.o submit___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsubmit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsubmit.a /bin/ln -f .submit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.submit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' @@ -37634,7 +37670,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/api/archive_zip.cpp -o archive_zip.o /bin/rm -f libxcompress.a .libxcompress.a.stamp ar cr libxcompress.a compress.o stream.o streambuf.o stream_util.o bzip2.o lzo.o zlib.o zstd.o reader_zlib.o tar.o archive.o archive_.o archive_zip.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcompress.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcompress.a /bin/ln -f .xcompress.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcompress.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' @@ -39540,7 +39576,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/mbedtls/ssl_tls13_keys.c -o mbedtls/ssl_tls13_keys.o /bin/rm -f libxconnect.a .libxconnect.a.stamp ar cr libxconnect.a ncbi_lbsmd_stub.o ncbi_ansi_ext.o ncbi_types.o ncbi_core.o ncbi_priv.o ncbi_util.o ncbi_buffer.o ncbi_socket.o ncbi_connector.o ncbi_connection.o ncbi_connutil.o ncbi_ipv6.o ncbi_server_info.o ncbi_host_info.o ncbi_service.o ncbi_sendmail.o ncbi_base64.o ncbi_heapmgr.o ncbi_lb.o ncbi_socket_connector.o ncbi_file_connector.o ncbi_http_connector.o ncbi_memory_connector.o ncbi_service_connector.o ncbi_ftp_connector.o ncbi_version.o ncbi_iprange.o ncbi_local.o ncbi_dispd.o ncbi_lbos.o ncbi_linkerd.o ncbi_namerd.o parson.o ncbi_localip.o ncbi_lbdns.o ncbi_socket_cxx.o ncbi_core_cxx.o email_diag_handler.o ncbi_conn_streambuf.o ncbi_conn_stream.o ncbi_conn_test.o ncbi_misc.o ncbi_namedpipe.o ncbi_namedpipe_connector.o ncbi_pipe.o ncbi_pipe_connector.o ncbi_conn_reader_writer.o ncbi_userhost.o ncbi_http_session.o ncbi_lbos_cxx.o ncbi_monkey.o ncbi_service_cxx.o ncbi_localip_cxx.o ncbi_blowfish.o ncbi_usage_report.o connect_misc.o ncbi_gnutls.o ncbi_mbedtls.o ncbi_tls.o mbedtls/aes.o mbedtls/aesni.o mbedtls/arc4.o mbedtls/aria.o mbedtls/asn1parse.o mbedtls/asn1write.o mbedtls/base64.o mbedtls/bignum.o mbedtls/blowfish.o mbedtls/camellia.o mbedtls/ccm.o mbedtls/chacha20.o mbedtls/chachapoly.o mbedtls/cipher.o mbedtls/cipher_wrap.o mbedtls/cmac.o mbedtls/constant_time.o mbedtls/ctr_drbg.o mbedtls/des.o mbedtls/dhm.o mbedtls/ecdh.o mbedtls/ecdsa.o mbedtls/ecjpake.o mbedtls/ecp.o mbedtls/ecp_curves.o mbedtls/entropy.o mbedtls/entropy_poll.o mbedtls/error.o mbedtls/gcm.o mbedtls/havege.o mbedtls/hkdf.o mbedtls/hmac_drbg.o mbedtls/md.o mbedtls/md2.o mbedtls/md4.o mbedtls/mbedtls_md5.o mbedtls/memory_buffer_alloc.o mbedtls/mps_reader.o mbedtls/mps_trace.o mbedtls/nist_kw.o mbedtls/oid.o mbedtls/padlock.o mbedtls/pem.o mbedtls/pk.o mbedtls/pk_wrap.o mbedtls/pkcs12.o mbedtls/pkcs5.o mbedtls/pkparse.o mbedtls/pkwrite.o mbedtls/platform.o mbedtls/platform_util.o mbedtls/poly1305.o mbedtls/psa_crypto.o mbedtls/psa_crypto_aead.o mbedtls/psa_crypto_cipher.o mbedtls/psa_crypto_client.o mbedtls/psa_crypto_driver_wrappers.o mbedtls/psa_crypto_ecp.o mbedtls/psa_crypto_hash.o mbedtls/psa_crypto_mac.o mbedtls/psa_crypto_rsa.o mbedtls/psa_crypto_se.o mbedtls/psa_crypto_slot_management.o mbedtls/psa_crypto_storage.o mbedtls/psa_its_file.o mbedtls/ripemd160.o mbedtls/rsa.o mbedtls/rsa_internal.o mbedtls/sha1.o mbedtls/sha256.o mbedtls/sha512.o mbedtls/threading.o mbedtls/timing.o mbedtls/mbedtls_version.o mbedtls/version_features.o mbedtls/xtea.o mbedtls/certs.o mbedtls/pkcs11.o mbedtls/x509.o mbedtls/x509_create.o mbedtls/x509_crl.o mbedtls/x509_crt.o mbedtls/x509_csr.o mbedtls/x509write_crt.o mbedtls/x509write_csr.o mbedtls/debug.o mbedtls/net_sockets.o mbedtls/ssl_cache.o mbedtls/ssl_ciphersuites.o mbedtls/ssl_cli.o mbedtls/ssl_cookie.o mbedtls/ssl_msg.o mbedtls/ssl_srv.o mbedtls/ssl_ticket.o mbedtls/ssl_tls.o mbedtls/ssl_tls13_keys.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxconnect.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxconnect.a /bin/ln -f .xconnect.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xconnect.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' @@ -45633,7 +45669,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/seq_id_sort.cpp -o seq_id_sort.o /bin/rm -f libxobjmgr.a .libxobjmgr.a.stamp ar cr libxobjmgr.a seq_table_setters.o seq_table_info.o seq_annot_info.o table_field.o seq_map_switch.o snp_annot_info.o annot_types_ci.o seq_loc_cvt.o annot_selector.o seq_descr_ci.o feat_ci.o graph_ci.o annot_object.o annot_object_index.o annot_ci.o tse_info.o tse_info_object.o seq_entry_info.o bioseq_base_info.o bioseq_set_info.o bioseq_info.o data_source.o priority.o prefetch_impl.o prefetch_manager.o prefetch_manager_impl.o prefetch_actions.o scope.o heap_scope.o scope_impl.o scope_info.o tse_handle.o seq_map.o seq_map_ci.o seq_entry_ci.o seq_annot_ci.o seq_table_ci.o seq_entry_handle.o bioseq_set_handle.o bioseq_handle.o seq_annot_handle.o align_ci.o data_loader.o handle_range.o objmgr_exception.o handle_range_map.o object_manager.o seq_vector.o seq_vector_ci.o seqdesc_ci.o tse_split_info.o tse_chunk_info.o bioseq_ci.o annot_type_index.o seq_loc_mapper.o seq_align_mapper.o annot_collector.o data_loader_factory.o mapped_feat.o seq_feat_handle.o seq_graph_handle.o seq_align_handle.o tse_assigner.o scope_transaction.o scope_transaction_impl.o edit_commands_impl.o bioseq_edit_commands.o seq_entry_edit_commands.o bioseq_set_edit_commands.o edit_saver.o unsupp_editsaver.o edits_db_engine.o edits_db_saver.o annot_finder.o gc_assembly_parser.o split_parser.o seq_id_sort.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjmgr.a /bin/ln -f .xobjmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' @@ -46796,12 +46832,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/info_cache.cpp -o info_cache.o /bin/rm -f libncbi_xreader.a .libncbi_xreader.a.stamp ar cr libncbi_xreader.a dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader.a /bin/ln -f .ncbi_xreader.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader.dep /bin/rm -f libncbi_xreader-dll.so .libncbi_xreader-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC dispatcher.o reader.o writer.o processors.o wgsmaster.o reader_snp.o seqref.o blob_id.o request_result.o reader_id1_base.o reader_id2_base.o reader_service.o incr_time.o info_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader-dll.so /bin/ln -f .ncbi_xreader-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47436,12 +47472,12 @@ _loader_impl.o /bin/rm -f libncbi_xloader_genbank.a .libncbi_xloader_genbank.a.stamp ar cr libncbi_xloader_genbank.a gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_genbank.a /bin/ln -f .ncbi_xloader_genbank.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_genbank.dep /bin/rm -f libncbi_xloader_genbank-dll.so .libncbi_xloader_genbank-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xloader_genbank-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC gbloader.o gbnative.o gbload_util.o psg_loader.o psg_loader_impl.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lz -lbz2 -lzstd -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xloader_genbank-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xloader_genbank-dll.so /bin/ln -f .ncbi_xloader_genbank-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xloader_genbank-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' @@ -47635,12 +47671,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/cache/writer_cache.cpp -o writer_cache.o /bin/rm -f libncbi_xreader_cache.a .libncbi_xreader_cache.a.stamp ar cr libncbi_xreader_cache.a reader_cache.o writer_cache.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_cache.a /bin/ln -f .ncbi_xreader_cache.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_cache.dep /bin/rm -f libncbi_xreader_cache-dll.so .libncbi_xreader_cache-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_cache-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_cache.o writer_cache.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_cache-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_cache-dll.so /bin/ln -f .ncbi_xreader_cache-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_cache-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' @@ -47755,12 +47791,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id1/reader_id1.cpp -o reader_id1.o /bin/rm -f libncbi_xreader_id1.a .libncbi_xreader_id1.a.stamp ar cr libncbi_xreader_id1.a reader_id1.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id1.a /bin/ln -f .ncbi_xreader_id1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id1.dep /bin/rm -f libncbi_xreader_id1-dll.so .libncbi_xreader_id1-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id1-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id1.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lncbi_xreader-dll -lid2 -lxobjmgr -lid1 -lseqedit -lseqsplit -lsubmit -lgenome_collection -lseqset -lseq -lpub -lmedline -lbiblio -lgeneral -lseqcode -lxcompress -lxser -lsequtil -lxconnect -lxutil -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id1-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id1-dll.so /bin/ln -f .ncbi_xreader_id1-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id1-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' @@ -47874,12 +47910,12 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/data_loaders/genbank/id2/reader_id2.cpp -o reader_id2.o /bin/rm -f libncbi_xreader_id2.a .libncbi_xreader_id2.a.stamp ar cr libncbi_xreader_id2.a reader_id2.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id2.a /bin/ln -f .ncbi_xreader_id2.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id2.dep /bin/rm -f libncbi_xreader_id2-dll.so .libncbi_xreader_id2-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libncbi_xreader_id2-dll.so -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC reader_id2.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lm -lpthread -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libncbi_xreader_id2-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libncbi_xreader_id2-dll.so /bin/ln -f .ncbi_xreader_id2-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.ncbi_xreader_id2-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' @@ -48751,7 +48787,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/proteinkmer/kblastapi.cpp -o kblastapi.o /bin/rm -f libproteinkmer.a .libproteinkmer.a.stamp ar cr libproteinkmer.a blastkmer.o blastkmerindex.o blastkmeroptions.o blastkmerresults.o blastkmerutils.o mhfile.o pearson.o kblastapi.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libproteinkmer.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libproteinkmer.a /bin/ln -f .proteinkmer.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.proteinkmer.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' @@ -48912,7 +48948,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/pubseq_gateway/client/psg_client_transport.cpp -o psg_client_transport.o /bin/rm -f libpsg_client.a .libpsg_client.a.stamp ar cr libpsg_client.a psg_client.o psg_client_transport.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpsg_client.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpsg_client.a /bin/ln -f .psg_client.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.psg_client.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' @@ -49072,7 +49108,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/pubmed/pubmed___.cpp -o pubmed___.o /bin/rm -f libpubmed.a .libpubmed.a.stamp ar cr libpubmed.a pubmed__.o pubmed___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libpubmed.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libpubmed.a /bin/ln -f .pubmed.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.pubmed.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' @@ -49242,7 +49278,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/scoremat/scoremat___.cpp -o scoremat___.o /bin/rm -f libscoremat.a .libscoremat.a.stamp ar cr libscoremat.a scoremat__.o scoremat___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libscoremat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libscoremat.a /bin/ln -f .scoremat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.scoremat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' @@ -51004,7 +51040,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTDB -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/blast/seqdb_reader/seqidlist_reader.cpp -o seqidlist_reader.o /bin/rm -f libseqdb.a .libseqdb.a.stamp ar cr libseqdb.a seqdb.o seqdbbitset.o seqdbfilter.o seqdbatlas.o seqdbalias.o seqdbcommon.o seqdbfile.o seqdbimpl.o seqdbvol.o seqdbvolset.o seqdboidlist.o seqdbisam.o seqdbtax.o seqdbgilistset.o seqdbexpert.o seqdbblob.o seqdbcol.o seqdbgimask.o seqdbobj.o seqdb_lmdb.o seqdblmdbset.o seqidlist_reader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqdb.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqdb.a /bin/ln -f .seqdb.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqdb.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' @@ -51732,7 +51768,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/seqmasks_io/mask_writer_blastdb_maskinfo.cpp -o mask_writer_blastdb_maskinfo.o /bin/rm -f libseqmasks_io.a .libseqmasks_io.a.stamp ar cr libseqmasks_io.a mask_cmdline_args.o mask_bdb_reader.o mask_fasta_reader.o mask_writer.o mask_writer_fasta.o mask_writer_int.o mask_writer_tab.o mask_writer_seqloc.o mask_writer_blastdb_maskinfo.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libseqmasks_io.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libseqmasks_io.a /bin/ln -f .seqmasks_io.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.seqmasks_io.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' @@ -52440,13 +52476,13 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/usr/include/ncbi-vdb -I/usr/include/ncbi-vdb/os/linux -I/usr/include/ncbi-vdb/os/unix -I/usr/include/ncbi-vdb/cc/gcc/aarch64 -I/usr/include/ncbi-vdb/cc/gcc -I//usr/include/os/linux -I//usr/include/os/unix -I//usr/include/cc/gcc/arm64 -I//usr/include/cc/gcc -D_DEBUGGING -DNCBI_SRAREAD_EXPORTS /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/sra/readers/sra/snpread.cpp -o snpread.o /bin/rm -f libsraread.a .libsraread.a.stamp ar cr libsraread.a sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsraread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsraread.a /bin/ln -f .sraread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sraread.dep /bin/rm -f libsraread-dll.so .libsraread-dll.so.stamp /usr/bin/g++ -std=gnu++17 -shared -o libsraread-dll.so -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 -fPIC sraread.o vdbread.o kdbread.o csraread.o wgsresolver.o wgsresolver_impl.o wgsread.o graphread.o snpread.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lgenome_collection -lseqedit -lseqsplit -lsubmit -lseqset -lseq -lseqcode -lsequtil -lpub -lmedline -lbiblio -lgeneral -lxser -lxutil -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lm -lpthread : libsraread-dll.so -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libsraread-dll.so /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libsraread-dll.so /bin/ln -f .sraread-dll.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.sraread-dll.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra' @@ -52473,7 +52509,7 @@ /usr/bin/gcc -std=gnu18 -fgnu89-inline -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/tables/raw_scoremat.c -o raw_scoremat.o /bin/rm -f libtables.a .libtables.a.stamp ar cr libtables.a raw_scoremat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtables.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtables.a /bin/ln -f .tables.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.tables.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' @@ -52964,7 +53000,7 @@ roducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon1/ctreecont.cpp -o ctreecont.o /bin/rm -f libtaxon1.a .libtaxon1.a.stamp ar cr libtaxon1.a taxon1__.o taxon1___.o taxon1.o cache.o utils.o ctreecont.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtaxon1.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtaxon1.a /bin/ln -f .taxon1.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.taxon1.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' @@ -53219,7 +53255,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/taxon3/taxon3.cpp -o taxon3.o /bin/rm -f libtaxon3.a .libtaxon3.a.stamp ar cr libtaxon3.a taxon3__.o taxon3___.o taxon3.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libtaxon3.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libtaxon3.a /bin/ln -f .taxon3.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.taxon3.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' @@ -53379,7 +53415,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/eutils/uilist/uilist___.cpp -o uilist___.o /bin/rm -f libuilist.a .libuilist.a.stamp ar cr libuilist.a uilist__.o uilist___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libuilist.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libuilist.a /bin/ln -f .uilist.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.uilist.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' @@ -53471,7 +53507,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/profile/rtprofile.cpp -o rtprofile.o /bin/rm -f libutrtprof.a .libutrtprof.a.stamp ar cr libutrtprof.a rtprofile.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libutrtprof.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libutrtprof.a /bin/ln -f .utrtprof.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.utrtprof.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' @@ -53657,7 +53693,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/valid/valid___.cpp -o valid___.o /bin/rm -f libvalid.a .libvalid.a.stamp ar cr libvalid.a valid__.o valid___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libvalid.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libvalid.a /bin/ln -f .valid.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.valid.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' @@ -53817,7 +53853,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/variation/variation___.cpp -o variation___.o /bin/rm -f libvariation.a .libvariation.a.stamp ar cr libvariation.a variation__.o variation___.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libvariation.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libvariation.a /bin/ln -f .variation.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.variation.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' @@ -54965,7 +55001,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/align/util/best_placement.cpp -o best_placement.o /bin/rm -f libxalgoalignutil.a .libxalgoalignutil.a.stamp ar cr libxalgoalignutil.a align_shadow.o blast_tabular.o score_builder.o score_lookup.o align_filter.o genomic_compart.o patch_sequence.o align_compare.o align_sort.o depth_filter.o tabular_fmt.o collection_score.o named_collection_score_impl.o best_placement.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoalignutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoalignutil.a /bin/ln -f .xalgoalignutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoalignutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util' @@ -55402,7 +55438,7 @@ ex_search.o /bin/rm -f libxalgoblastdbindex.a .libxalgoblastdbindex.a.stamp ar cr libxalgoblastdbindex.a sequence_istream_fasta.o sequence_istream_bdb.o dbindex.o dbindex_factory.o dbindex_search.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoblastdbindex.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoblastdbindex.a /bin/ln -f .xalgoblastdbindex.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoblastdbindex.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' @@ -55502,7 +55538,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/dustmask/symdust.cpp -o symdust.o /bin/rm -f libxalgodustmask.a .libxalgodustmask.a.stamp ar cr libxalgodustmask.a symdust.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgodustmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgodustmask.a /bin/ln -f .xalgodustmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgodustmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' @@ -57398,7 +57434,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include/util/regexp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/sequence/micro_introns.cpp -o micro_introns.o /bin/rm -f libxalgoseq.a .libxalgoseq.a.stamp ar cr libxalgoseq.a adapter_search.o cpg.o nuc_prop.o orf.o prot_prop.o regexp_loc.o seq_match.o restriction.o antigenic.o coiled_coil.o signal_seq.o make_cdr_prods.o find_pattern.o gene_model.o project_exons.o transform_align.o annot_compare.o compare_feats.o align_group.o masking_delta.o align_cleanup.o util.o gap_analysis.o internal_stops.o micro_introns.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgoseq.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgoseq.a /bin/ln -f .xalgoseq.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgoseq.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' @@ -61692,7 +61728,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/winmask/seq_masker_istat.cpp -o seq_masker_istat.o /bin/rm -f libxalgowinmask.a .libxalgowinmask.a.stamp ar cr libxalgowinmask.a seq_masker.o seq_masker_score_mean.o seq_masker_score_mean_glob.o seq_masker_score_min.o seq_masker_util.o seq_masker_window.o seq_masker_window_ambig.o seq_masker_window_pattern.o seq_masker_window_pattern_ambig.o seq_masker_ostat_factory.o seq_masker_ostat.o seq_masker_ostat_ascii.o seq_masker_istat_ascii.o seq_masker_uset_simple.o seq_masker_istat_factory.o seq_masker_ostat_bin.o seq_masker_uset_array.o seq_masker_istat_bin.o seq_masker_ostat_opt.o seq_masker_ostat_opt_ascii.o seq_masker_uset_hash.o seq_masker_istat_oascii.o seq_masker_ostat_opt_bin.o seq_masker_istat_obinary.o seq_masker_cache_boost.o win_mask_counts_converter.o win_mask_dup_table.o win_mask_gen_counts.o win_mask_util.o win_mask_config.o seq_masker_istat.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalgowinmask.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalgowinmask.a /bin/ln -f .xalgowinmask.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalgowinmask.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' @@ -63592,7 +63628,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/alnmgr/aln_container.cpp -o aln_container.o /bin/rm -f libxalnmgr.a .libxalnmgr.a.stamp ar cr libxalnmgr.a aln_builders.o aln_converters.o aln_generators.o aln_seqid.o aln_serial.o alndiag.o alnmap.o alnmapprint.o alnmatch.o alnmerger.o alnmix.o alnpos_ci.o alnsegments.o alnseq.o alnvec.o alnvec_iterator.o alnvecprint.o pairwise_aln.o sparse_aln.o sparse_ci.o alntext.o score_builder_base.o aln_container.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxalnmgr.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxalnmgr.a /bin/ln -f .xalnmgr.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xalnmgr.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr' @@ -70442,7 +70478,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLAST -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/api/blast_usage_report.cpp -o blast_usage_report.o /bin/rm -f libxblast.a .libxblast.a.stamp ar cr libxblast.a .core_aa_ungapped.o .core_blast_diagnostics.o .core_blast_engine.o .core_blast_extend.o .core_blast_filter.o .core_blast_gapalign.o .core_blast_hits.o .core_blast_hspstream.o .core_blast_itree.o .core_blast_kappa.o .core_blast_lookup.o .core_blast_aalookup.o .core_blast_aascan.o .core_blast_nalookup.o .core_blast_nascan.o .core_blast_message.o .core_blast_options.o .core_blast_psi.o .core_na_ungapped.o .core_blast_psi_priv.o .core_blast_seg.o .core_blast_seqsrc.o .core_blast_setup.o .core_blast_stat.o .core_blast_traceback.o .core_blast_util.o .core_gapinfo.o .core_greedy_align.o .core_hspfilter_collector.o .core_hspfilter_besthit.o .core_hspfilter_culling.o .core_link_hsps.o .core_lookup_util.o .core_lookup_wrap.o .core_matrix_freq_ratios.o .core_ncbi_std.o .core_ncbi_math.o .core_blast_encoding.o .core_pattern.o .core_phi_extend.o .core_phi_gapalign.o .core_phi_lookup.o .core_blast_parameters.o .core_blast_posit.o .core_blast_program.o .core_blast_query_info.o .core_blast_tune.o .core_blast_sw.o .core_blast_dynarray.o .core_split_query.o .core_gencode_singleton.o .core_index_ungapped.o .core_blast_traceback_mt_priv.o .core_blast_hspstream_mt_utils.o .core_boost_erf.o .core_jumper.o .core_hspfilter_mapper.o .core_spliced_hits.o blast_aux.o blast_options_cxx.o blast_options_local_priv.o blast_options_builder.o blast_setup_cxx.o blast_seqalign.o blast_options_handle.o blast_nucl_options.o disc_nucl_options.o blast_prot_options.o psiblast_options.o blast_rps_options.o blastx_options.o tblastx_options.o tblastn_options.o rpstblastn_options.o phiblast_nucl_options.o phiblast_prot_options.o pssm_engine.o local_blast.o remote_blast.o seqinfosrc_seqvec.o seqinfosrc_seqdb.o seqinfosrc_bioseq.o seqsrc_multiseq.o seqsrc_seqdb.o seqsrc_query_factory.o bl2seq.o blast_objmgr_tools.o repeats_filter_cxx.o blast_mtlock.o psibl2seq.o local_db_adapter.o psiblast.o psiblast_impl.o psiblast_iteration.o psi_pssm_input.o msa_pssm_input.o psiblast_aux_priv.o blast_aux_priv.o blast_advprot_options.o blastp_kmer_options.o version.o dust_filter.o rps_aux.o search_strategy.o setup_factory.o prelim_stage.o traceback_stage.o uniform_search.o local_search.o blast_results.o remote_search.o query_data.o objmgr_query_data.o objmgrfree_query_data.o bioseq_extract_data_priv.o effsearchspace_calc.o blast_seqinfosrc_aux.o blast_dbindex.o split_query_cxx.o split_query_aux_priv.o split_query_blk.o winmask_filter.o subj_ranges_set.o rpsblast_local.o seedtop.o cdd_pssm_input.o deltablast_options.o deltablast.o magicblast_options.o magicblast.o blast_node.o blast_usage_report.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxblast.a /bin/ln -f .xblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xblast.dep rm .core_phi_gapalign.c .core_blast_dynarray.c .core_boost_erf.c .core_blast_itree.c .core_blast_seqsrc.c .core_blast_engine.c .core_ncbi_math.c .core_index_ungapped.c .core_blast_filter.c .core_lookup_wrap.c .core_hspfilter_besthit.c .core_gapinfo.c .core_gencode_singleton.c .core_blast_psi.c .core_spliced_hits.c .core_blast_hspstream_mt_utils.c .core_blast_diagnostics.c .core_blast_hspstream.c .core_blast_lookup.c .core_blast_nascan.c .core_na_ungapped.c .core_blast_nalookup.c .core_phi_extend.c .core_blast_aalookup.c .core_blast_psi_priv.c .core_blast_encoding.c .core_jumper.c .core_blast_util.c .core_blast_posit.c .core_hspfilter_mapper.c .core_hspfilter_culling.c .core_blast_program.c .core_ncbi_std.c .core_blast_traceback.c .core_blast_stat.c .core_blast_setup.c .core_link_hsps.c .core_greedy_align.c .core_pattern.c .core_lookup_util.c .core_blast_hits.c .core_blast_kappa.c .core_blast_message.c .core_blast_parameters.c .core_matrix_freq_ratios.c .core_hspfilter_collector.c .core_aa_ungapped.c .core_blast_traceback_mt_priv.c .core_blast_aascan.c .core_phi_lookup.c .core_blast_gapalign.c .core_blast_query_info.c .core_blast_seg.c .core_split_query.c .core_blast_sw.c .core_blast_options.c .core_blast_tune.c .core_blast_extend.c @@ -71497,7 +71533,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -DNCBI_MODULE=BLASTFORMAT -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/algo/blast/format/blast_async_format.cpp -o blast_async_format.o /bin/rm -f libxblastformat.a .libxblastformat.a.stamp ar cr libxblastformat.a blastfmtutil.o blastxml_format.o blastxml2_format.o blast_format.o data4xmlformat.o data4xml2format.o build_archive.o vecscreen_run.o sam.o blast_async_format.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxblastformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxblastformat.a /bin/ln -f .xblastformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xblastformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' @@ -73411,7 +73447,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/cgi/user_agent.cpp -o user_agent.o /bin/rm -f libxcgi.a .libxcgi.a.stamp ar cr libxcgi.a ncbicgi.o cgiapp.o cgictx.o ncbicgir.o ncbires.o ref_args.o cgi_run.o cgi_util.o cgi_serial.o cgi_session.o cgi_exception.o cgiapp_cached.o cgi_entry_reader.o user_agent.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcgi.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcgi.a /bin/ln -f .xcgi.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcgi.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' @@ -74411,7 +74447,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/cleanup/cleanup_message.cpp -o cleanup_message.o /bin/rm -f libxcleanup.a .libxcleanup.a.stamp ar cr libxcleanup.a autogenerated_cleanup.o autogenerated_extended_cleanup.o cleanup.o cleanup_utils.o gene_qual_normalization.o cleanup_user_object.o cleanup_author.o cleanup_pub.o newcleanupp.o capitalization_string.o fix_feature_id.o cleanup_message.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxcleanup.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxcleanup.a /bin/ln -f .xcleanup.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xcleanup.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' @@ -79039,7 +79075,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/services/netschedule_api_wn_info.cpp -o netschedule_api_wn_info.o /bin/rm -f libxconnserv.a .libxconnserv.a.stamp ar cr libxconnserv.a grid_worker.o ns_client_factory.o grid_worker_app.o grid_client.o grid_client_app.o wn_commit_thread.o wn_main_loop.o wn_cleanup.o wn_offline_mode.o grid_control_thread.o grid_globals.o grid_rw_impl.o remote_app.o srv_connections.o netservice_api.o netservice_params.o netschedule_api.o netschedule_api_submitter.o netschedule_api_executor.o netschedule_api_reader.o netschedule_api_admin.o netschedule_api_getjob.o netschedule_key.o netschedule_api_expt.o netcache_key.o netcache_rw.o netcache_params.o netcache_api.o netcache_api_admin.o netcache_search.o netservice_protocol_parser.o util.o clparser.o json_over_uttp.o netstorage.o netstorage_rpc.o netstorageobjectloc.o netstorageobjectinfo.o netstorage_direct_nc.o ns_output_parser.o ns_job_serializer.o compound_id.o compound_id_v0.o netschedule_api_wn_info.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxconnserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxconnserv.a /bin/ln -f .xconnserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xconnserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' @@ -82760,7 +82796,7 @@ /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/format/flat_qual_slots.cpp -o flat_qual_slots.o /bin/rm -f libxformat.a .libxformat.a.stamp ar cr libxformat.a accession_item.o basecount_item.o comment_item.o contig_item.o date_item.o dbsource_item.o defline_item.o feature_item.o genome_item.o ctrl_items.o keywords_item.o locus_item.o primary_item.o reference_item.o segment_item.o sequence_item.o source_item.o version_item.o wgs_item.o tsa_item.o flat_seqloc.o qualifiers.o context.o gather_items.o embl_gather.o genbank_gather.o flat_file_generator.o item_formatter.o embl_formatter.o genbank_formatter.o format_item_ostream.o item_ostream.o ostream_text_ostream.o origin_item.o ftable_gather.o ftable_formatter.o gbseq_formatter.o flat_file_config.o alignment_item.o gap_item.o genome_project_item.o sam_formatter.o cigar_formatter.o gather_iter.o html_anchor_item.o inst_info_map.o gene_finder.o flat_qual_slots.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxformat.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxformat.a /bin/ln -f .xformat.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xformat.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/format' @@ -83551,7 +83587,7 @@ o writer_htmlenc.o /bin/rm -f libxhtml.a .libxhtml.a.stamp ar cr libxhtml.a node.o html.o htmlhelper.o page.o pager.o selection.o components.o commentdiag.o indentstream.o html_exception.o writer_htmlenc.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxhtml.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxhtml.a /bin/ln -f .xhtml.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xhtml.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' @@ -83710,7 +83746,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/logging/listener.cpp -o listener.o /bin/rm -f libxlogging.a .libxlogging.a.stamp ar cr libxlogging.a message.o listener.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxlogging.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxlogging.a /bin/ln -f .xlogging.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xlogging.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' @@ -83941,7 +83977,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/names.cpp -o names.o /bin/rm -f libxnetblast.a .libxnetblast.a.stamp ar cr libxnetblast.a blast__.o blast___.o names.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxnetblast.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxnetblast.a /bin/ln -f .xnetblast.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xnetblast.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' @@ -84106,7 +84142,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objects/blast/blastclient_.cpp -o blastclient_.o /bin/rm -f libxnetblastcli.a .libxnetblastcli.a.stamp ar cr libxnetblastcli.a blastclient.o blastclient_.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxnetblastcli.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxnetblastcli.a /bin/ln -f .xnetblastcli.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xnetblastcli.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' @@ -87067,7 +87103,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/edit/huge_asn_loader.cpp -o huge_asn_loader.o /bin/rm -f libxobjedit.a .libxobjedit.a.stamp ar cr libxobjedit.a gene_utils.o seq_entry_edit.o promote.o autodef_with_tax.o field_handler.o apply_object.o string_constraint.o seqid_guesser.o dblink_field.o struc_comm_field.o text_desc_field.o gb_block_field.o link_cds_mrna.o cds_fix.o loc_edit.o mail_report.o feattable_edit.o gaps_edit.o source_edit.o rna_edit.o remote_updater.o mla_updater.o eutils_updater.o parse_text_options.o publication_edit.o gap_trim.o external_annots.o feature_propagate.o text_object_description.o seq_edit.o pub_fix.o huge_asn_reader.o huge_file.o huge_file_process.o huge_asn_loader.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjedit.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjedit.a /bin/ln -f .xobjedit.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjedit.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' @@ -92897,7 +92933,7 @@ rong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -Wno-unused-local-typedefs /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objtools/readers/line_error.cpp -o line_error.o /bin/rm -f libxobjread.a .libxobjread.a.stamp ar cr libxobjread.a reader_message.o reader_listener.o reader_message_handler.o read_util.o format_guess_ex.o seqid_validate.o acc_pattern.o agp_read.o agp_seq_entry.o agp_util.o agp_validate_reader.o cigar.o fasta.o aln_formats.o alnread.o aln_errors.o aln_error_reporter.o aln_formatguess.o aln_util.o aln_reader.o aln_scanner.o aln_scanner_fastagap.o aln_scanner_clustal.o aln_scanner_nexus.o aln_scanner_phylip.o aln_scanner_sequin.o aln_scanner_multalign.o fasta_aln_builder.o fasta_reader_utils.o getfeature.o track_data.o reader_data.o microarray_reader.o phrap.o reader_base.o readfeat.o rm_reader.o wiggle_reader.o gff3_reader.o gtf_reader.o gff3_location_merger.o gtf_location_merger.o gff_base_columns.o gff2_data.o gff2_reader.o gvf_reader.o vcf_reader.o psl_reader.o psl_data.o bed_reader.o bed_autosql.o bed_autosql_standard.o bed_autosql_custom.o bed_column_data.o best_feat_finder.o source_mod_parser.o fasta_exception.o agp_converter.o ucscregion_reader.o struct_cmt_reader.o mod_reader.o mod_error.o descr_mod_apply.o feature_mod_apply.o mod_to_enum.o message_listener.o line_error.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjread.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjread.a /bin/ln -f .xobjread.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjread.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' @@ -94664,7 +94700,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/objmgr/util/autodef_options.cpp -o autodef_options.o /bin/rm -f libxobjutil.a .libxobjutil.a.stamp ar cr libxobjutil.a weight.o sequence.o feature.o indexer.o seqtitle.o create_defline.o obj_sniff.o seq_loc_util.o seq_align_util.o seq_trimmer.o bioseqgaps_ci.o objutil.o feature_edit.o autodef.o autodef_feature_clause_base.o autodef_source_desc.o autodef_available_modifier.o autodef_mod_combo.o autodef_source_group.o autodef_feature_clause.o autodef_options.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxobjutil.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxobjutil.a /bin/ln -f .xobjutil.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xobjutil.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' @@ -95161,7 +95197,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/qparse/parse_utils.cpp -o parse_utils.o /bin/rm -f libxqueryparse.a .libxqueryparse.a.stamp ar cr libxqueryparse.a query_parse.o parser.o query_tree_print.o query_exec.o parse_utils.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxqueryparse.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxqueryparse.a /bin/ln -f .xqueryparse.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xqueryparse.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' @@ -95479,7 +95515,7 @@ /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/connect/connection_pool.cpp -o connection_pool.o /bin/rm -f libxthrserv.a .libxthrserv.a.stamp ar cr libxthrserv.a threaded_server.o server.o server_monitor.o connection_pool.o -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib /bin/ln -f libxthrserv.a /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib/libxthrserv.a /bin/ln -f .xthrserv.dep /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/status/.xthrserv.dep make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' @@ -95489,17 +95525,17 @@ make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.edit_imgt_file builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/edit_imgt_file.pl /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/edit_imgt_file.pl make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrdb builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrdb.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/makeogrdb.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' /usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/Makefile.makeogrannote builddir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast all make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/makeogrannote.py /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/makeogrannote.py make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95703,7 +95739,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastn_app.cpp -o igblastn_app.o /usr/bin/g++ -std=gnu++17 -Wl,-rpath,//usr/lib -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastn_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lblast_app_util -ligblast -lblast_sra_input-static -lsraread-static -lblastinput-static -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -L//usr/lib -lncbi-vdb -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -lbz2 -lz -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -llmdb -lpthread -lm -lpthread -o igblastn -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f igblastn /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/igblastn make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95909,7 +95945,7 @@ Updating dependency information for /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp. /usr/bin/g++ -std=gnu++17 -c -Wall -Wno-format-y2k -pthread -fopenmp -g -O2 -ffile-prefix-map=/build/reproducible-path/ncbi-igblast-1.20.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fPIC -D_DEBUG -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -Wdate-time -D_FORTIFY_SOURCE=2 -D_MT -D_REENTRANT -D_THREAD_SAFE -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/inc -I/build/reproducible-path/ncbi-igblast-1.20.0/c++/include -DNCBI_APP_BUILT_AS=igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/src/app/igblast/igblastp_app.cpp -o igblastp_app.o /usr/bin/g++ -std=gnu++17 -Wl,--enable-new-dtags -Wl,-export-dynamic -pthread -fopenmp -Wl,-z,relro -gdwarf-3 -O2 igblastp_app.o -L/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/lib -lblast_app_util -ligblast -lxalgoalignutil-static -lblastinput-static -lncbi_xloader_blastdb_rmt-static -lncbi_xloader_blastdb-static -lxblastformat-static -lalign_format-static -ltaxon1-static -lblastdb_format-static -lgene_info-static -lxformat-static -lxcleanup-static -lgbseq-static -lxobjedit-static -lefetch-static -leutils-static -legquery-static -lelink-static -lepost-static -lesearch-static -lespell-static -lesummary-static -leinfo-static -luilist-static -lehistory-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -ltaxon3-static -lmlacli-static -lmla-static -lmedlars-static -lpubmed-static -lmedline-static -lbiblio-static -lgeneral-static -lvalid-static -lxalnmgr-static -lblastxml-static -lblastxml2-static -lxcgi-static -lxhtml-static -lxqueryparse-static -lproteinkmer-static -lxblast-static -lutrtprof-static -lxalgoblastdbindex-static -lcomposition_adjustment-static -lxalgodustmask-static -lxalgowinmask-static -lseqmasks_io-static -lseqdb-static -lblast_services-static -lxalnmgr-static -lxobjutil-static -lxobjread-static -lvariation-static -lsubmit-static -lxlogging-static -lxnetblastcli-static -lxnetblast-static -lblastdb-static -lscoremat-static -ltables-static -lxregexp-static -lregexp-static -lncbi_xloader_genbank-static -lncbi_xreader_id1-static -lncbi_xreader_id2-static -lncbi_xreader_cache-static -ldbapi_driver-static -lncbi_xreader-static -lxconnect-static -lid1-static -lid2-static -lxobjmgr-static -lgenome_collection-static -lseqedit-static -lseqsplit-static -lsubmit-static -lseqset-static -lseq-static -lseqcode-static -lsequtil-static -lpub-static -lmedline-static -lbiblio-static -lgeneral-static -lxser-static -lxutil-static -lxncbi-static -lxcompress-static -lz -lbz2 -lzstd -lmbedtls -lmbedx509 -lmbedcrypto -lz -lresolv -llmdb -lpthread -lm -lpthread -o igblastp -/bin/bash /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin +/bin/sh /build/reproducible-path/ncbi-igblast-1.20.0/c++/scripts/common/impl/if_diff.sh /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin /bin/ln -f igblastp /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/bin/igblastp make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -95921,33 +95957,33 @@ cd c\+\+ && make -j12 check TESTSUITEFLAGS="-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++' if test -s ""; then \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo727545 check_p RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo2498212 check_p RUN_CHECK=Y; \ else \ - cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo727545 check_r RUN_CHECK=Y; \ + cd /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build && make -j12 --jobserver-auth=fifo:/tmp/GMfifo2498212 check_r RUN_CHECK=Y; \ fi make[2]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build' make[2]: warning: -j12 forced in submake: resetting jobserver mode. ====================================================================== make[3]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build' make[3]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C corelib -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo727597 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498235 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/test' -/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo727597 check_add_r || exit 5 +/usr/bin/make -C jaeger -j12 --jobserver-auth=fifo:/tmp/GMfifo2498235 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/jaeger' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib/jaeger' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/corelib' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C regexp -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' @@ -95955,15 +95991,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' SKIP -- util/regexp/test_pcre make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/regexp' -/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C xregexp -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/xregexp' -/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C compress -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo727716 check_add_r || exit 5 +/usr/bin/make -C bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498271 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project bzip2 due to unmet requirements: @@ -95976,13 +96012,13 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo727750 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/bzip2 TMPL=bzip2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498280 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/bzip2' -/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo727716 check_add_r || exit 5 +/usr/bin/make -C zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo2498271 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project zlib due to unmet requirements: @@ -95995,43 +96031,43 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo727858 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/util/compress/zlib TMPL=zlib -j12 --jobserver-auth=fifo:/tmp/GMfifo2498310 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/zlib' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo727716 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo2498271 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/compress' -/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C diff -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/diff' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/diff' -/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C image -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/image' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/image' -/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C tables -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo727970 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498347 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/tables' -/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C sequtil -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/sequtil' -/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C bitset -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/bitset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96039,12 +96075,12 @@ /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/bitset' -/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C qparse -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/qparse' -/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C lmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project lmdb due to unmet requirements: @@ -96064,7 +96100,7 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdb' -/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C lmdbxx -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' @@ -96072,77 +96108,77 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' SKIP -- util/lmdbxx/lmdbxx_sample make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/lmdbxx' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/demo' -/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo727630 check_add_r || exit 5 +/usr/bin/make -C profile -j12 --jobserver-auth=fifo:/tmp/GMfifo2498247 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util/profile' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/util' -/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C connect -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo728143 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo2498411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728153 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498415 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/services' -/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo728143 check_add_r || exit 5 +/usr/bin/make -C ext -j12 --jobserver-auth=fifo:/tmp/GMfifo2498411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/ext' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/ext' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728143 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/test' -/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo728143 check_add_r || exit 5 +/usr/bin/make -C daemons -j12 --jobserver-auth=fifo:/tmp/GMfifo2498411 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/daemons' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect/daemons' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/connect' -/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C cgi -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728223 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498435 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi/test' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/cgi' -/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C html -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728258 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498443 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo728258 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2498443 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/demo' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html/demo' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/html' -/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C build-system -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo728310 check_add_r || exit 5 +/usr/bin/make -C helpers -j12 --jobserver-auth=fifo:/tmp/GMfifo2498455 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' @@ -96150,14 +96186,14 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' SKIP -- build-system/helpers/run_with_lock make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/helpers' -/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo728310 check_add_r || exit 5 +/usr/bin/make -C project_tree_builder -j12 --jobserver-auth=fifo:/tmp/GMfifo2498455 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' SKIP -- build-system/project_tree_builder/project_tree_builder -/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo728357 check_add_r || exit 5 +/usr/bin/make -C msbuild -j12 --jobserver-auth=fifo:/tmp/GMfifo2498475 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project msbuild due to unmet requirements: @@ -96170,7 +96206,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo728409 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/build-system/project_tree_builder/msbuild TMPL=msbuild_dataobj -j12 --jobserver-auth=fifo:/tmp/GMfifo2498496 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' @@ -96178,10 +96214,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder/msbuild' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system/project_tree_builder' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/build-system' -/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C serial -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo728474 check_add_r || exit 5 +/usr/bin/make -C datatool -j12 --jobserver-auth=fifo:/tmp/GMfifo2498521 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' @@ -96189,26 +96225,26 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' TEST -- serial/datatool/datatool make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/datatool' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728474 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498521 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/test' -/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo728474 check_add_r || exit 5 +/usr/bin/make -C soap -j12 --jobserver-auth=fifo:/tmp/GMfifo2498521 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/soap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/soap' -/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo728474 check_add_r || exit 5 +/usr/bin/make -C grpc_integration -j12 --jobserver-auth=fifo:/tmp/GMfifo2498521 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/grpc_integration' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial/grpc_integration' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/serial' -/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C db -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo728622 check_add_r || exit 5 +/usr/bin/make -C sqlite -j12 --jobserver-auth=fifo:/tmp/GMfifo2498606 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db/sqlite' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -96216,38 +96252,38 @@ /bin/echo 'Warning: non-existent sub-project "bdb"' Warning: non-existent sub-project "bdb" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/db' -/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C dbapi -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo728657 check_add_r || exit 5 +/usr/bin/make -C driver -j12 --jobserver-auth=fifo:/tmp/GMfifo2498615 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/util' -/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C ctlib -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ctlib' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ctlib' -/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C ftds100 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds100' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds100' -/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C ftds-default -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds-default' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/ftds-default' -/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C mysql -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/mysql' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/mysql' -/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project odbc due to unmet requirements: @@ -96260,7 +96296,7 @@ make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo728771 mark-as-disabled +/usr/bin/make -f /build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/Makefile.lib.tmpl srcdir=/build/reproducible-path/ncbi-igblast-1.20.0/c++/src/dbapi/driver/odbc TMPL=ncbi_xdbapi_odbc -j12 --jobserver-auth=fifo:/tmp/GMfifo2498648 mark-as-disabled make[8]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' @@ -96268,7 +96304,7 @@ Warning: non-existent sub-project "samples" make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/odbc' -/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo728667 check_add_r || exit 5 +/usr/bin/make -C samples -j12 --jobserver-auth=fifo:/tmp/GMfifo2498619 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi/driver/samples' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96281,272 +96317,272 @@ /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/dbapi' -/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C objects -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C general -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728856 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498685 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo728856 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498685 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/general' -/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C biblio -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biblio' -/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C medline -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medline' -/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C pub -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pub' -/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seqcode -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqcode' -/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seq -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728929 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498713 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo728929 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498713 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seq' -/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seqset -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo728962 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498725 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqset' -/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C submit -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/submit' -/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seqedit -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqedit' -/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seqsplit -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqsplit' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo729039 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498745 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id1' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/id2' -/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C entrez2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrez2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "demo"' Warning: non-existent sub-project "demo" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrez2' -/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C pubmed -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pubmed' -/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C medlars -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/medlars' -/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C mla -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mla' -/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C proj -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/proj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/proj' -/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C scoremat -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/scoremat' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blast' -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastdb' -/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C blastxml -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml' -/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C blastxml2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/blastxml2' -/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C mmdb -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mmdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mmdb' -/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C cn3d -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cn3d' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cn3d' -/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C cdd -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cdd' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/cdd' -/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C ncbimime -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/ncbimime' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' Warning: non-existent sub-project "test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/ncbimime' -/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C pcsubstance -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcsubstance' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcsubstance' -/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C pcassay -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay' -/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C pcassay2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay2' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/pcassay2' -/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C gbseq -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbseq' -/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C insdseq -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/insdseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/insdseq' -/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C tinyseq -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/tinyseq' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/tinyseq' -/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C biotree -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biotree' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/biotree' -/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C entrezgene -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrezgene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/entrezgene' -/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C omssa -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/omssa' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/omssa' -/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C remap -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/remap' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/remap' -/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C seqtest -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqtest' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/seqtest' -/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C taxon1 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon1' -/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C taxon3 -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/taxon3' -/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C gbproj -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbproj' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/gbproj' -/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C trackmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/trackmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/trackmgr' -/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C valerr -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valerr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valerr' -/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C valid -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/valid' -/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C access -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/access' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/access' -/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C docsum -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/docsum' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/docsum' -/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C featdef -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/featdef' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/featdef' -/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C genomecoll -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo729637 check_add_r || exit 5 +/usr/bin/make -C gc_cli -j12 --jobserver-auth=fifo:/tmp/GMfifo2498898 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' @@ -96555,69 +96591,69 @@ SKIP -- objects/genomecoll/gc_cli/gc_cli (unmet build REQUIRES) make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll/gc_cli' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genomecoll' -/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C homologene -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/homologene' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/homologene' -/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C mim -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mim' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/mim' -/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C objprt -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/objprt' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/objprt' -/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C variation -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation' -/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C macro -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/macro' make[5]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "unit_test"' Warning: non-existent sub-project "unit_test" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/macro' -/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C genesbyloc -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genesbyloc' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/genesbyloc' -/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C coords -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/coords' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/coords' -/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C varrep -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/varrep' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/varrep' -/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C variation_libs -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo729729 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo2498944 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo729733 check_add_r || exit 5 +/usr/bin/make -C search_by_rsid -j12 --jobserver-auth=fifo:/tmp/GMfifo2498948 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/search_by_rsid' -/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo729733 check_add_r || exit 5 +/usr/bin/make -C tooltip_service -j12 --jobserver-auth=fifo:/tmp/GMfifo2498948 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp/tooltip_service' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs/dbsnp' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/variation_libs' -/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo728843 check_add_r || exit 5 +/usr/bin/make -C dbsnp -j12 --jobserver-auth=fifo:/tmp/GMfifo2498681 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo729745 check_add_r || exit 5 +/usr/bin/make -C primary_track -j12 --jobserver-auth=fifo:/tmp/GMfifo2498960 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp/primary_track' make[6]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "test"' @@ -96625,65 +96661,65 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp/primary_track' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects/dbsnp' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objects' -/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C objmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo729761 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498969 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/test' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/test' -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo729761 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo2498969 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo729781 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498977 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/util' -/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo729761 check_add_r || exit 5 +/usr/bin/make -C split -j12 --jobserver-auth=fifo:/tmp/GMfifo2498969 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/split' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr/split' make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objmgr' -/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C objtools -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C logging -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/logging' /bin/echo 'Warning: non-existent sub-project "unit_test_util"' Warning: non-existent sub-project "unit_test_util" -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo729824 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo2498998 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/app' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/app' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo729824 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498998 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/test' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo729824 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2498998 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/readers' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo729878 check_add_r || exit 5 +/usr/bin/make -C seqdb_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo2499014 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo729890 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499018 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' @@ -96691,7 +96727,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' SKIP -- objtools/blast/seqdb_reader/demo/seqdb_demo make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/demo' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo729890 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499018 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' @@ -96700,10 +96736,10 @@ TEST -- objtools/blast/seqdb_reader/test/seqdb_perf make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_reader' -/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo729878 check_add_r || exit 5 +/usr/bin/make -C seqdb_writer -j12 --jobserver-auth=fifo:/tmp/GMfifo2499014 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730050 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499113 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96714,10 +96750,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/seqdb_writer' -/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo729878 check_add_r || exit 5 +/usr/bin/make -C gene_info_reader -j12 --jobserver-auth=fifo:/tmp/GMfifo2499014 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo730093 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499126 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' @@ -96725,7 +96761,7 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' SKIP -- objtools/blast/gene_info_reader/demo/gene_info_reader make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730093 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499126 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96738,10 +96774,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/gene_info_reader' /bin/echo 'Warning: non-existent sub-project "gene_info_writer"' Warning: non-existent sub-project "gene_info_writer" -/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo729878 check_add_r || exit 5 +/usr/bin/make -C services -j12 --jobserver-auth=fifo:/tmp/GMfifo2499014 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730149 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499156 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96752,10 +96788,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/services' -/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo729878 check_add_r || exit 5 +/usr/bin/make -C blastdb_format -j12 --jobserver-auth=fifo:/tmp/GMfifo2499014 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730177 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499169 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast/blastdb_format/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -96769,18 +96805,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/blast' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C pubseq_gateway -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo730202 check_add_r || exit 5 +/usr/bin/make -C diag -j12 --jobserver-auth=fifo:/tmp/GMfifo2499183 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/diag' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/diag' -/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo730202 check_add_r || exit 5 +/usr/bin/make -C cassandra -j12 --jobserver-auth=fifo:/tmp/GMfifo2499183 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730217 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499191 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' @@ -96789,10 +96825,10 @@ SKIP -- objtools/pubseq_gateway/cassandra/test/psg_cassandra_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cassandra' -/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo730202 check_add_r || exit 5 +/usr/bin/make -C client -j12 --jobserver-auth=fifo:/tmp/GMfifo2499183 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730240 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499202 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' @@ -96801,7 +96837,7 @@ SKIP -- objtools/pubseq_gateway/client/test/test_psg_client_impl (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/client' -/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo730202 check_add_r || exit 5 +/usr/bin/make -C protobuf -j12 --jobserver-auth=fifo:/tmp/GMfifo2499183 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project protobuf due to unmet requirements: @@ -96821,10 +96857,10 @@ make[8]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/protobuf' -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo730202 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo2499183 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730287 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499227 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' @@ -96838,43 +96874,43 @@ make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway/cache' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/pubseq_gateway' -/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C data_loaders -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo730327 check_add_r || exit 5 +/usr/bin/make -C genbank -j12 --jobserver-auth=fifo:/tmp/GMfifo2499245 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C cache -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/cache' -/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C pubseq -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq' -/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C id2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id2' -/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C id1 -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/id1' -/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C pubseq2 -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/pubseq2' -/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C gicache -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/gicache' -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730336 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499249 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96882,10 +96918,10 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/genbank' /bin/echo 'Warning: non-existent sub-project "lds2"' Warning: non-existent sub-project "lds2" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo730327 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo2499245 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730443 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499282 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders/blastdb/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -96898,20 +96934,20 @@ /bin/echo 'Warning: non-existent sub-project "cdd"' Warning: non-existent sub-project "cdd" make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/data_loaders' -/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C simple -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/simple' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/simple' -/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C alnmgr -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo730491 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499297 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730491 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499297 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/alnmgr/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -96923,63 +96959,63 @@ Warning: non-existent sub-project "test" /bin/echo 'Warning: non-existent sub-project "manip"' Warning: non-existent sub-project "manip" -/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C eutils -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C egquery -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/egquery' -/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C elink -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/elink' -/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C epost -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/epost' -/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C esearch -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esearch' -/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C espell -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/espell' -/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C esummary -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/esummary' -/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C linkout -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/linkout' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/linkout' -/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C einfo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/einfo' -/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C uilist -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/uilist' -/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C ehistory -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/ehistory' -/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C efetch -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730564 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499356 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' @@ -96988,41 +97024,41 @@ TEST -- objtools/eutils/efetch/test/test_pubmed_article make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch/test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/efetch' -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo730507 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo2499312 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils/api' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/eutils' -/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C edit -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730705 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499448 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/unit_test' -/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo730705 check_add_r || exit 5 +/usr/bin/make -C pubmed_fetch -j12 --jobserver-auth=fifo:/tmp/GMfifo2499448 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/pubmed_fetch' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/pubmed_fetch' -/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo730705 check_add_r || exit 5 +/usr/bin/make -C test_remote_updater -j12 --jobserver-auth=fifo:/tmp/GMfifo2499448 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/test_remote_updater' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit/test_remote_updater' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/edit' -/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C cleanup -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730747 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499464 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup/test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/cleanup' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. @@ -97033,19 +97069,19 @@ Warning: non-existent sub-project "asniotest" /bin/echo 'Warning: non-existent sub-project "align"' Warning: non-existent sub-project "align" -/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C seqmasks_io -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730782 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499479 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/seqmasks_io' -/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo729803 check_add_r || exit 5 +/usr/bin/make -C align_format -j12 --jobserver-auth=fifo:/tmp/GMfifo2498989 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo730801 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499487 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools/align_format/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project unit_test due to unmet requirements: @@ -97071,16 +97107,16 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/objtools' /bin/echo 'Warning: non-existent sub-project "ctools"' Warning: non-existent sub-project "ctools" -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo730849 check_add_r || exit 5 +/usr/bin/make -C readers -j12 --jobserver-auth=fifo:/tmp/GMfifo2499507 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo730856 check_add_r || exit 5 +/usr/bin/make -C sra -j12 --jobserver-auth=fifo:/tmp/GMfifo2499511 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo730864 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499515 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra/test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra/readers/sra/test' @@ -97125,50 +97161,50 @@ /bin/echo 'Warning: non-existent sub-project "app"' Warning: non-existent sub-project "app" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/sra' -/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C algo -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo731388 check_add_r || exit 5 +/usr/bin/make -C dustmask -j12 --jobserver-auth=fifo:/tmp/GMfifo2499827 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/dustmask' -/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo731388 check_add_r || exit 5 +/usr/bin/make -C winmask -j12 --jobserver-auth=fifo:/tmp/GMfifo2499827 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/winmask' -/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo731388 check_add_r || exit 5 +/usr/bin/make -C sequence -j12 --jobserver-auth=fifo:/tmp/GMfifo2499827 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo731425 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499839 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/demo' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo731425 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499839 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/unit_test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence/unit_test' make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/sequence' -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo731388 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo2499827 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C composition_adjustment -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/composition_adjustment' -/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C core -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/core' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/core' -/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C dbindex -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo731495 check_add_r || exit 5 +/usr/bin/make -C makeindex -j12 --jobserver-auth=fifo:/tmp/GMfifo2499863 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex/makeindex' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex/makeindex' @@ -97179,15 +97215,15 @@ make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/dbindex' /bin/echo 'Warning: non-existent sub-project "dbindex_search"' Warning: non-existent sub-project "dbindex_search" -/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C api -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/api' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/api' -/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C proteinkmer -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo731557 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499888 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' @@ -97196,29 +97232,29 @@ SKIP -- algo/blast/proteinkmer/unit_test/proteinkmer_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/proteinkmer' -/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C format -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/format' -/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C blastinput -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo731594 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499903 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/unit_test' -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo731594 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499903 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput/demo' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blastinput' -/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C blast_sra_input -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo731618 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499915 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[8]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' @@ -97227,7 +97263,7 @@ SKIP -- algo/blast/blast_sra_input/unit_test/blastsrainput_unit_test (unmet build REQUIRES) make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input/unit_test' make[6]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/blast_sra_input' -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo731460 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo2499851 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast/igblast' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Nothing to be done for 'check_add_r'. @@ -97241,18 +97277,18 @@ make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/blast' /bin/echo 'Warning: non-existent sub-project "segmask"' Warning: non-existent sub-project "segmask" -/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo731388 check_add_r || exit 5 +/usr/bin/make -C align -j12 --jobserver-auth=fifo:/tmp/GMfifo2499827 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo731667 check_add_r || exit 5 +/usr/bin/make -C util -j12 --jobserver-auth=fifo:/tmp/GMfifo2499934 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util' make[6]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo731680 check_add_r || exit 5 +/usr/bin/make -C demo -j12 --jobserver-auth=fifo:/tmp/GMfifo2499938 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/demo' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. make[7]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/demo' -/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo731680 check_add_r || exit 5 +/usr/bin/make -C unit_test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499938 check_add_r || exit 5 make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo/align/util/unit_test' make[7]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Nothing to be done for 'check_add_r'. @@ -97294,15 +97330,15 @@ /bin/echo 'Warning: non-existent sub-project "id_mapper"' Warning: non-existent sub-project "id_mapper" make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/algo' -/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C misc -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc' make[4]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo731755 check_add_r || exit 5 +/usr/bin/make -C third_party -j12 --jobserver-auth=fifo:/tmp/GMfifo2499967 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[5]: Nothing to be done for 'check_add_r'. make[5]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party' -/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo731755 check_add_r || exit 5 +/usr/bin/make -C third_party_static -j12 --jobserver-auth=fifo:/tmp/GMfifo2499967 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/third_party_static' make[5]: warning: -j12 forced in submake: resetting jobserver mode. NOTE: Skipping project third_party_static due to unmet requirements: @@ -97330,10 +97366,10 @@ Warning: non-existent sub-project "hgvs" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo731755 check_add_r || exit 5 +/usr/bin/make -C jsonwrapp -j12 --jobserver-auth=fifo:/tmp/GMfifo2499967 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp' make[5]: warning: -j12 forced in submake: resetting jobserver mode. -/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo731826 check_add_r || exit 5 +/usr/bin/make -C test -j12 --jobserver-auth=fifo:/tmp/GMfifo2499993 check_add_r || exit 5 make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp/test' make[6]: warning: -j12 forced in submake: resetting jobserver mode. make[7]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc/jsonwrapp/test' @@ -97355,7 +97391,7 @@ make[4]: Leaving directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/misc' /bin/echo 'Warning: non-existent sub-project "gui"' Warning: non-existent sub-project "gui" -/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo727584 check_add_r || exit 5 +/usr/bin/make -C app -j12 --jobserver-auth=fifo:/tmp/GMfifo2498231 check_add_r || exit 5 make[4]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app' make[4]: warning: -j12 forced in submake: resetting jobserver mode. /bin/echo 'Warning: non-existent sub-project "asn2asn"' @@ -97372,7 +97408,7 @@ Warning: non-existent sub-project "asn_cleanup" /bin/echo 'Warning: non-existent sub-project "id1_fetch"' Warning: non-existent sub-project "id1_fetch" -/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo731896 check_add_r || exit 5 +/usr/bin/make -C blast -j12 --jobserver-auth=fifo:/tmp/GMfifo2500010 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blast' @@ -97438,7 +97474,7 @@ Warning: non-existent sub-project "grid" /bin/echo 'Warning: non-existent sub-project "netstorage"' Warning: non-existent sub-project "netstorage" -/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo731896 check_add_r || exit 5 +/usr/bin/make -C igblast -j12 --jobserver-auth=fifo:/tmp/GMfifo2500010 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/igblast' @@ -97456,7 +97492,7 @@ Warning: non-existent sub-project "dustmasker" /bin/echo 'Warning: non-existent sub-project "segmasker"' Warning: non-existent sub-project "segmasker" -/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo731896 check_add_r || exit 5 +/usr/bin/make -C blastdb -j12 --jobserver-auth=fifo:/tmp/GMfifo2500010 check_add_r || exit 5 make[5]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blastdb' make[5]: warning: -j12 forced in submake: resetting jobserver mode. make[6]: Entering directory '/build/reproducible-path/ncbi-igblast-1.20.0/c++/GCC1520-DebugOptMT64/build/app/blastdb' @@ -97596,7 +97632,7 @@ Testing, please wait... -OK -- [serial/datatool] datatool.sh (real 0.38, user 0.18, sys 0.06) +OK -- [serial/datatool] datatool.sh (real 0.66, user 0.36, sys 0.16) SKP -- [serial/datatool] datatool_xml.sh ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_mt ABS -- [objtools/blast/seqdb_reader/test] scan_blastdb_st @@ -97668,8 +97704,8 @@ dpkg-gencontrol: warning: package igblast: substitution variable ${perl:Depends} unused, but is defined dh_md5sums -O--sourcedirectory=c\+\+ dh_builddeb -O--sourcedirectory=c\+\+ -dpkg-deb: building package 'igblast-dbgsym' in '../igblast-dbgsym_1.20.0-3_arm64.deb'. dpkg-deb: building package 'igblast' in '../igblast_1.20.0-3_arm64.deb'. +dpkg-deb: building package 'igblast-dbgsym' in '../igblast-dbgsym_1.20.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../ncbi-igblast_1.20.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../ncbi-igblast_1.20.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -97677,12 +97713,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/358475/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3845555 and its subdirectories -I: Current time: Sat Nov 14 21:40:16 -12 2026 -I: pbuilder-time-stamp: 1794735616 +I: removing directory /srv/workspace/pbuilder/358475 and its subdirectories +I: Current time: Mon Oct 13 19:04:53 +14 2025 +I: pbuilder-time-stamp: 1760331893