Diff of the two buildlogs: -- --- b1/build.log 2025-02-17 20:27:54.483298391 +0000 +++ b2/build.log 2025-02-17 20:35:28.802972991 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Feb 17 08:25:15 -12 2025 -I: pbuilder-time-stamp: 1739823915 +I: Current time: Sun Apr 25 23:13:58 +14 2027 +I: pbuilder-time-stamp: 1808644438 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -26,52 +26,84 @@ dpkg-source: info: applying remove-pkg-resources.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/34297/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Apr 25 09:14 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='ea0a1e8cf37f40f1b5f678e51b377e98' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='34297' - PS1='# ' - PS2='> ' + INVOCATION_ID=41a7058dda2640c2a149ad336e5f8c17 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1601695 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H7OBcIts/pbuilderrc_GpxL --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H7OBcIts/b1 --logfile b1/build.log python-pbcommand_2.1.1+git20231020.28d1635-1.dsc' - SUDO_GID='109' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.H7OBcIts/pbuilderrc_EfR5 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.H7OBcIts/b2 --logfile b2/build.log python-pbcommand_2.1.1+git20231020.28d1635-1.dsc' + SUDO_GID=109 + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/34297/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -306,7 +338,7 @@ Get: 171 http://deb.debian.org/debian unstable/main arm64 python3-pytz all 2025.1-3 [150 kB] Get: 172 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.3.0-1 [114 kB] Get: 173 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] -Fetched 79.3 MB in 1s (138 MB/s) +Fetched 79.3 MB in 2s (34.6 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19918 files and directories currently installed.) @@ -880,8 +912,8 @@ Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Feb 17 20:25:43 UTC 2025. -Universal Time is now: Mon Feb 17 20:25:43 UTC 2025. +Local time is now: Sun Apr 25 09:15:52 UTC 2027. +Universal Time is now: Sun Apr 25 09:15:52 UTC 2027. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libfontenc1:arm64 (1:1.1.8-1+b2) ... @@ -1040,7 +1072,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-pbcommand_2.1.1+git20231020.28d1635-1_source.changes +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-pbcommand_2.1.1+git20231020.28d1635-1_source.changes dpkg-buildpackage: info: source package python-pbcommand dpkg-buildpackage: info: source version 2.1.1+git20231020.28d1635-1 dpkg-buildpackage: info: source distribution unstable @@ -1060,8 +1096,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1082,8 +1118,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1113,8 +1149,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1132,8 +1168,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1152,8 +1188,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1236,8 +1272,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -1323,258 +1359,258 @@ scheduling tests via LoadScopeScheduling -tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option -tests/test_validators.py::TestValidators::test_validate_file tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option -tests/test_models_report_table.py::TestTable::test_table -tests/test_models_report.py::TestReportModel::test_from_simple_dict -[gw0] [ 0%] PASSED tests/test_models_report.py::TestReportModel::test_from_simple_dict -tests/test_models_report_table.py::TestEmptyTable::test_str tests/test_models_report_table.py::TestBasicTable::test_str -tests/test_models_report_plot.py::TestPlot::test_plot_null_id -tests/test_models_report.py::TestReportModel::test_report_null_ns -[gw0] [ 1%] PASSED tests/test_models_report.py::TestReportModel::test_report_null_ns -[gw11] [ 2%] PASSED tests/test_models_report_table.py::TestTable::test_table -tests/test_models_report_table.py::TestTable::test_add_column tests/test_models_report_plotgroup.py::TestPlotGroup::test_init +tests/test_models_report.py::TestReportModel::test_from_simple_dict +[gw0] [ 0%] PASSED tests/test_models_report.py::TestReportModel::test_from_simple_dict tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option -[gw9] [ 3%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int -[gw9] [ 3%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int -[gw2] [ 4%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int +[gw11] [ 1%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option +tests/test_models_report_plot.py::TestPlot::test_plot_null_id +tests/test_models_report_table.py::TestTable::test_table +tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id +[gw4] [ 2%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id +tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id +[gw4] [ 3%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option +[gw9] [ 3%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_init +tests/test_validators.py::TestValidators::test_validate_file +[gw5] [ 4%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_id +tests/test_models_report_plot.py::TestPlot::test_plot_null_image +[gw5] [ 5%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_image tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option -[gw7] [ 5%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option +[gw7] [ 6%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float -[gw9] [ 6%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float -[gw8] [ 7%] PASSED tests/test_models_report_table.py::TestBasicTable::test_str +[gw7] [ 7%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float +[gw7] [ 7%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float +[gw6] [ 8%] PASSED tests/test_models_report_table.py::TestBasicTable::test_str tests/test_models_report_table.py::TestBasicTable::test_columns -[gw8] [ 7%] PASSED tests/test_models_report_table.py::TestBasicTable::test_columns -tests/test_models_report_table.py::TestBasicTable::test_column_values -[gw8] [ 8%] PASSED tests/test_models_report_table.py::TestBasicTable::test_column_values -[gw1] [ 9%] PASSED tests/test_validators.py::TestValidators::test_validate_file -tests/test_validators.py::TestValidators::test_validate_file_fails -[gw11] [ 10%] PASSED tests/test_models_report_table.py::TestTable::test_add_column -tests/test_models_report_table.py::TestTable::test_append_data -[gw11] [ 11%] PASSED tests/test_models_report_table.py::TestTable::test_append_data -[gw10] [ 11%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_str -tests/test_models_report_table.py::TestEmptyTable::test_columns -[gw10] [ 12%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_columns -tests/test_models_report_table.py::TestEmptyTable::test_column_values -[gw4] [ 13%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id -tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id -[gw4] [ 14%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id -tests/test_models_report_attribute.py::TestAttribute::test_to_dict -[gw4] [ 15%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_to_dict -tests/test_models_report_attribute.py::TestAttribute::test_eq -[gw4] [ 15%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_eq -[gw2] [ 16%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean -[gw2] [ 17%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string -[gw2] [ 18%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string -[gw10] [ 19%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_column_values -[gw6] [ 19%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_init tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id -[gw6] [ 20%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id +[gw9] [ 9%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot -[gw6] [ 21%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot -tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict -[gw6] [ 22%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict -[gw5] [ 23%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_id -tests/test_models_report_plot.py::TestPlot::test_plot_null_image -[gw5] [ 23%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_image +[gw3] [ 10%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option +[gw3] [ 11%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option +tests/test_models_report_attribute.py::TestAttribute::test_to_dict +tests/test_models_report_table.py::TestEmptyTable::test_str +[gw8] [ 11%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_str +tests/test_models_report_table.py::TestEmptyTable::test_columns +[gw8] [ 12%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_columns +tests/test_models_report_table.py::TestEmptyTable::test_column_values +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int +[gw11] [ 13%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float +[gw11] [ 14%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float tests/test_models_report_plot.py::TestPlot::test_to_dict -[gw5] [ 24%] PASSED tests/test_models_report_plot.py::TestPlot::test_to_dict +[gw5] [ 15%] PASSED tests/test_models_report_plot.py::TestPlot::test_to_dict tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail -[gw5] [ 25%] PASSED tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail -[gw1] [ 26%] PASSED tests/test_validators.py::TestValidators::test_validate_file_fails -tests/test_validators.py::TestValidators::test_validate_nonempty_file -[gw1] [ 26%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file -tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails -[gw1] [ 27%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails -[gw3] [ 28%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option -[gw3] [ 29%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice -[gw3] [ 30%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice +[gw3] [ 15%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices -[gw3] [ 30%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices -tests/test_validators.py::TestValidators::test_validate_output_dir -[gw7] [ 31%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float -[gw7] [ 32%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float +tests/test_models_report.py::TestReportModel::test_report_null_ns +[gw0] [ 16%] PASSED tests/test_models_report.py::TestReportModel::test_report_null_ns tests/test_models_report.py::TestReportModel::test_report_empty_ns -[gw0] [ 33%] PASSED tests/test_models_report.py::TestReportModel::test_report_empty_ns +[gw9] [ 17%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot +tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict +[gw1] [ 18%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int +[gw1] [ 19%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean +[gw1] [ 19%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean +[gw6] [ 20%] PASSED tests/test_models_report_table.py::TestBasicTable::test_columns +tests/test_models_report_table.py::TestBasicTable::test_column_values +[gw6] [ 21%] PASSED tests/test_models_report_table.py::TestBasicTable::test_column_values +tests/test_models_report_table.py::TestBasicTable::test_to_dict +[gw2] [ 22%] PASSED tests/test_validators.py::TestValidators::test_validate_file +tests/test_validators.py::TestValidators::test_validate_file_fails +[gw2] [ 23%] PASSED tests/test_validators.py::TestValidators::test_validate_file_fails +tests/test_validators.py::TestValidators::test_validate_nonempty_file +[gw2] [ 23%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file +tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +[gw4] [ 24%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_to_dict +tests/test_models_report_attribute.py::TestAttribute::test_eq +[gw4] [ 25%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_eq +[gw10] [ 26%] PASSED tests/test_models_report_table.py::TestTable::test_table +tests/test_models_report_table.py::TestTable::test_add_column +[gw10] [ 26%] PASSED tests/test_models_report_table.py::TestTable::test_add_column +tests/test_models_report_table.py::TestTable::test_append_data +[gw10] [ 27%] PASSED tests/test_models_report_table.py::TestTable::test_append_data +[gw8] [ 28%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_column_values +[gw0] [ 29%] PASSED tests/test_models_report.py::TestReportModel::test_report_empty_ns tests/test_models_report.py::TestReportModel::test_duplicate_ids -[gw0] [ 34%] PASSED tests/test_models_report.py::TestReportModel::test_duplicate_ids +[gw0] [ 30%] PASSED tests/test_models_report.py::TestReportModel::test_duplicate_ids tests/test_models_report.py::TestReportModel::test_illegal_id +[gw6] [ 30%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_dict +[gw3] [ 31%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices +[gw5] [ 32%] PASSED tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail +[gw9] [ 33%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string +[gw1] [ 34%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string [gw0] [ 34%] PASSED tests/test_models_report.py::TestReportModel::test_illegal_id tests/test_models_report.py::TestReportModel::test_empty_id [gw0] [ 35%] PASSED tests/test_models_report.py::TestReportModel::test_empty_id tests/test_models_report.py::TestReportModel::test_uppercase_id [gw0] [ 36%] PASSED tests/test_models_report.py::TestReportModel::test_uppercase_id tests/test_models_report.py::TestReportModel::test_to_dict -[gw0] [ 37%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict -tests/test_models_report.py::TestReportModel::test_version_and_changelist -[gw0] [ 38%] PASSED tests/test_models_report.py::TestReportModel::test_version_and_changelist -tests/test_models_report.py::TestReportModel::test_load_from_file -[gw0] [ 38%] PASSED tests/test_models_report.py::TestReportModel::test_load_from_file -tests/test_models_report.py::TestReportModel::test_to_dict_multi -[gw0] [ 39%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict_multi -tests/test_models_report.py::TestReportModel::test_get_attribute_by_id -[gw0] [ 40%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id -tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id -[gw0] [ 41%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id -tests/test_models_report.py::TestReportModel::test_get_table_by_id -[gw0] [ 42%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id -tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id -[gw0] [ 42%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id -tests/test_models_report.py::TestReportModel::test_get_column_by_id -[gw0] [ 43%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id -tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id -[gw0] [ 44%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id -tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id -[gw0] [ 45%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id -tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id -[gw0] [ 46%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id -tests/test_models_report.py::TestReportModel::test_get_plot_by_id -[gw0] [ 46%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id -tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id -[gw0] [ 47%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id -tests/test_models_report.py::TestReportModel::test_merge -[gw0] [ 48%] PASSED tests/test_models_report.py::TestReportModel::test_merge -[gw1] [ 49%] PASSED tests/test_validators.py::TestValidators::test_validate_output_dir +[gw2] [ 37%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +tests/test_validators.py::TestValidators::test_validate_output_dir +[gw2] [ 38%] PASSED tests/test_validators.py::TestValidators::test_validate_output_dir tests/test_validators.py::TestValidators::test_validate_report_file -[gw1] [ 50%] PASSED tests/test_validators.py::TestValidators::test_validate_report_file +[gw2] [ 38%] PASSED tests/test_validators.py::TestValidators::test_validate_report_file tests/test_validators.py::TestValidators::test_validate_report -[gw1] [ 50%] PASSED tests/test_validators.py::TestValidators::test_validate_report -tests/test_models_report_table.py::TestBasicTable::test_to_dict -[gw8] [ 51%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_dict -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string -[gw9] [ 52%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string +[gw0] [ 39%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict +tests/test_models_report.py::TestReportModel::test_version_and_changelist +[gw0] [ 40%] PASSED tests/test_models_report.py::TestReportModel::test_version_and_changelist +tests/test_models_report.py::TestReportModel::test_load_from_file +[gw2] [ 41%] PASSED tests/test_validators.py::TestValidators::test_validate_report tests/test_models_report_table.py::TestEmptyTable::test_to_dict -tests/test_models_report_table.py::TestTable::test_add_data_by_column_id -[gw11] [ 53%] PASSED tests/test_models_report_table.py::TestTable::test_add_data_by_column_id +[gw8] [ 42%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_to_dict tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id -[gw10] [ 53%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_to_dict +[gw8] [ 42%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id +[gw0] [ 43%] PASSED tests/test_models_report.py::TestReportModel::test_load_from_file +tests/test_models_report.py::TestReportModel::test_to_dict_multi +[gw0] [ 44%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict_multi +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean +[gw7] [ 45%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id +[gw7] [ 46%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid +[gw7] [ 46%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string +[gw11] [ 47%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit -tests/test_models_report_attribute.py::TestAttribute::test_repr -[gw4] [ 54%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_repr +tests/test_models_report.py::TestReportModel::test_get_attribute_by_id +[gw0] [ 48%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id +tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id +tests/test_models_report_plot.py::TestPlot::test_plotly_plot +[gw5] [ 49%] PASSED tests/test_models_report_plot.py::TestPlot::test_plotly_plot tests/test_utils.py::TestCompose::test_simple -[gw4] [ 55%] PASSED tests/test_utils.py::TestCompose::test_simple +tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices +[gw3] [ 50%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option +[gw3] [ 50%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes +[gw8] [ 51%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes +[gw0] [ 52%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id +tests/test_models_report.py::TestReportModel::test_get_table_by_id +[gw5] [ 53%] PASSED tests/test_utils.py::TestCompose::test_simple tests/test_utils.py::TestCompose::test_no_args_list -[gw4] [ 56%] PASSED tests/test_utils.py::TestCompose::test_no_args_list +[gw5] [ 53%] PASSED tests/test_utils.py::TestCompose::test_no_args_list tests/test_utils.py::TestCompose::test_empty_list -[gw4] [ 57%] PASSED tests/test_utils.py::TestCompose::test_empty_list -[gw11] [ 57%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes -[gw11] [ 58%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups -[gw11] [ 59%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id -[gw9] [ 60%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid -[gw9] [ 61%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title -[gw9] [ 61%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title -[gw10] [ 62%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit -tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple +[gw5] [ 54%] PASSED tests/test_utils.py::TestCompose::test_empty_list tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type -[gw10] [ 63%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins -[gw6] [ 64%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type -[gw2] [ 65%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option -tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +[gw9] [ 55%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option -[gw6] [ 65%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option -tests/test_models_report_plot.py::TestPlot::test_plotly_plot -[gw5] [ 66%] PASSED tests/test_models_report_plot.py::TestPlot::test_plotly_plot +[gw9] [ 56%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option -[gw6] [ 67%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple +[gw1] [ 57%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option -[gw2] [ 68%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int -[gw2] [ 69%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int -[gw10] [ 69%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean -tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices -[gw3] [ 70%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices +[gw1] [ 57%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option +[gw0] [ 58%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id +tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id +[gw0] [ 59%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups +[gw8] [ 60%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups +tests/test_models_report_table.py::TestBasicTable::test_to_csv +[gw6] [ 61%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_csv tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option -[gw3] [ 71%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option +[gw7] [ 61%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title +[gw3] [ 62%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +[gw9] [ 63%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option +[gw11] [ 64%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit +tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins +tests/test_models_report.py::TestReportModel::test_get_column_by_id +[gw0] [ 65%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id +tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id +tests/test_models_report_attribute.py::TestAttribute::test_repr +[gw4] [ 65%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_repr +[gw6] [ 66%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option -[gw7] [ 72%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean +[gw1] [ 67%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option +tests/test_models_report_table.py::TestTable::test_add_data_by_column_id +[gw10] [ 68%] PASSED tests/test_models_report_table.py::TestTable::test_add_data_by_column_id +tests/test_models_common.py::TestLoadFileTypes::test_file_types +[gw11] [ 69%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins +[gw0] [ 69%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id +tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id tests/test_models_report.py::TestReportSpec::test_report_validation -[gw5] [ 73%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option -[gw5] [ 73%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option -[gw3] [ 74%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option -[gw7] [ 75%] PASSED tests/test_models_report.py::TestReportSpec::test_report_validation -tests/test_models_report.py::TestReportSpec::test_format_metric -[gw7] [ 76%] PASSED tests/test_models_report.py::TestReportSpec::test_format_metric -tests/test_models_report.py::TestReportModel::test_merge_tables -[gw0] [ 76%] PASSED tests/test_models_report.py::TestReportModel::test_merge_tables +[gw6] [ 70%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option +[gw10] [ 71%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_file_types +tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +[gw0] [ 72%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id +tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id +[gw0] [ 73%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id +tests/test_models_report.py::TestReportModel::test_get_plot_by_id tests/test_validators.py::TestValidators::test_validate_report_fails -tests/test_models_common.py::TestLoadFileTypes::test_file_types -[gw0] [ 77%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_file_types -[gw1] [ 78%] PASSED tests/test_validators.py::TestValidators::test_validate_report_fails +[gw2] [ 73%] PASSED tests/test_validators.py::TestValidators::test_validate_report_fails tests/test_models_common.py::TestDataStore::test_datastore_file -tests/test_models_report_table.py::TestBasicTable::test_to_csv -[gw8] [ 79%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_csv -[gw1] [ 80%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_file +[gw4] [ 74%] PASSED tests/test_models_report.py::TestReportSpec::test_report_validation +[gw2] [ 75%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_file +tests/test_models_report.py::TestReportSpec::test_format_metric +[gw0] [ 76%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id +tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id +[gw0] [ 76%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes +[gw7] [ 77%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes tests/test_models_report_column.py::TestColumn::test_column -[gw8] [ 80%] PASSED tests/test_models_report_column.py::TestColumn::test_column -tests/test_utils.py::TestCompose::test_partial -[gw4] [ 81%] PASSED tests/test_utils.py::TestCompose::test_partial +[gw11] [ 78%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +[gw4] [ 79%] PASSED tests/test_models_report.py::TestReportSpec::test_format_metric +[gw7] [ 80%] PASSED tests/test_models_report_column.py::TestColumn::test_column +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float +[gw3] [ 80%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float +tests/test_models_report.py::TestReportModel::test_merge +[gw0] [ 81%] PASSED tests/test_models_report.py::TestReportModel::test_merge tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots -tests/test_models_common.py::TestAlarm::test_pacbio_alarm -[gw11] [ 82%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes -[gw4] [ 83%] PASSED tests/test_models_common.py::TestAlarm::test_pacbio_alarm -[gw9] [ 84%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes +[gw8] [ 82%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots +tests/test_utils.py::TestCompose::test_partial +[gw5] [ 83%] PASSED tests/test_utils.py::TestCompose::test_partial tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json -tests/test_models_report.py::TestReportSchemaVersion100::test_sanity -tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline -[gw11] [ 84%] PASSED tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float -[gw9] [ 85%] PASSED tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +[gw5] [ 84%] PASSED tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice -[gw6] [ 86%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice -[gw2] [ 87%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float -tests/test_smrtlink_client.py::test_smrtlink_client_get -[gw6] [ 88%] SKIPPED tests/test_smrtlink_client.py::test_smrtlink_client_get -tests/test_models_report.py::TestReportSpec::test_apply_view -tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice -[gw3] [ 88%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice -[gw7] [ 89%] PASSED tests/test_models_report.py::TestReportSpec::test_apply_view +[gw9] [ 84%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice -tests/test_utils.py::TestSingleton::test_basic -[gw2] [ 90%] PASSED tests/test_utils.py::TestSingleton::test_basic -[gw5] [ 91%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice +[gw1] [ 85%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice +tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice +[gw6] [ 86%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice +tests/test_models_common.py::TestAlarm::test_pacbio_alarm +[gw3] [ 87%] PASSED tests/test_models_common.py::TestAlarm::test_pacbio_alarm +tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option +[gw8] [ 88%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option +tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +[gw9] [ 88%] PASSED tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity tests/test_models_common.py::TestLoadFileTypes::test_is_valid -[gw0] [ 92%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_is_valid +[gw10] [ 89%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_is_valid +tests/test_models_report.py::TestReportModel::test_merge_tables +[gw0] [ 90%] PASSED tests/test_models_report.py::TestReportModel::test_merge_tables +[gw1] [ 91%] PASSED tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity +tests/test_utils.py::TestSingleton::test_basic +[gw6] [ 92%] PASSED tests/test_utils.py::TestSingleton::test_basic +tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline tests/test_utils.py::TestUtils::test_get_dataset_metadata -[gw3] [ 92%] SKIPPED tests/test_utils.py::TestUtils::test_get_dataset_metadata +[gw10] [ 92%] SKIPPED tests/test_utils.py::TestUtils::test_get_dataset_metadata tests/test_models_report_column.py::TestColumn::test_repr -[gw8] [ 93%] PASSED tests/test_models_report_column.py::TestColumn::test_repr +[gw7] [ 93%] PASSED tests/test_models_report_column.py::TestColumn::test_repr +tests/test_smrtlink_client.py::test_smrtlink_client_get +[gw3] [ 94%] SKIPPED tests/test_smrtlink_client.py::test_smrtlink_client_get tests/test_models_report.py::TestMalformedReport::test_bad_01 -[gw11] [ 94%] PASSED tests/test_models_report.py::TestMalformedReport::test_bad_01 -tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option -[gw4] [ 95%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option +[gw5] [ 95%] PASSED tests/test_models_report.py::TestMalformedReport::test_bad_01 tests/test_models_common.py::TestDataStore::test_datastore_paths -[gw1] [ 96%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_paths -tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity -[gw9] [ 96%] PASSED tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity +[gw2] [ 96%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_paths +tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +tests/test_models_report.py::TestReportSpec::test_apply_view +[gw4] [ 96%] PASSED tests/test_models_report.py::TestReportSpec::test_apply_view tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator -[gw6] [ 97%] PASSED tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator -[gw10] [ 98%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline +[gw9] [ 97%] PASSED tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks -[gw10] [ 99%] PASSED tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks -tests/test_utils.py::TestLogging::test_get_parsed_args_log_level -[gw10] [100%] PASSED tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +[gw8] [ 98%] PASSED tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks +[gw1] [ 99%] PASSED tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +[gw11] [100%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/pbcore/__init__.py:1: 12 warnings @@ -1588,26 +1624,27 @@ Coverage XML written to file coverage.xml ============================= slowest 20 durations ============================= -0.58s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline -0.02s call tests/test_utils.py::TestLogging::test_get_parsed_args_log_level -0.01s call tests/test_validators.py::TestValidators::test_validate_file_fails -0.01s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files -0.01s setup tests/test_models_report.py::TestReportSpec::test_report_validation -0.01s setup tests/test_validators.py::TestValidators::test_validate_file -0.01s call tests/test_models_report_table.py::TestTable::test_add_column -0.01s setup tests/test_models_report_table.py::TestEmptyTable::test_str -0.01s call tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit -0.01s call tests/test_models_report_table.py::TestEmptyTable::test_str -0.01s setup tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id -0.01s call tests/test_models_report_table.py::TestEmptyTable::test_to_dict -0.01s setup tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option -0.01s setup tests/test_models_report_plotgroup.py::TestPlotGroup::test_init -0.01s call tests/test_validators.py::TestValidators::test_validate_output_dir -0.01s call tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins -0.01s setup tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id - -(3 durations < 0.005s hidden. Use -vv to show these durations.) -================= 124 passed, 2 skipped, 12 warnings in 10.49s ================= +3.58s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline +0.06s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +0.06s teardown tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json +0.05s call tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +0.05s call tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +0.05s call tests/test_validators.py::TestValidators::test_validate_report +0.05s call tests/test_models_common.py::TestLoadFileTypes::test_file_types +0.05s setup tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +0.05s call tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit +0.05s call tests/test_models_report.py::TestReportModel::test_report_empty_ns +0.05s call tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict +0.04s teardown tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id +0.04s setup tests/test_models_report.py::TestReportSpec::test_report_validation +0.04s call tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option +0.04s setup tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option +0.03s call tests/test_validators.py::TestValidators::test_validate_output_dir +0.03s call tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins +0.03s call tests/test_models_report.py::TestReportModel::test_illegal_id +0.03s teardown tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice +0.03s call tests/test_models_report.py::TestReportModel::test_to_dict +================= 124 passed, 2 skipped, 12 warnings in 40.97s ================= I: pybuild base:311: cd /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build; python3.13 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3.13 @@ -1620,258 +1657,258 @@ scheduling tests via LoadScopeScheduling -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option +tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id tests/test_models_report_plot.py::TestPlot::test_plot_null_id -tests/test_validators.py::TestValidators::test_validate_file -[gw1] [ 0%] PASSED tests/test_validators.py::TestValidators::test_validate_file +[gw5] [ 0%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_id +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option -[gw9] [ 1%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string -[gw9] [ 2%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string -[gw2] [ 3%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option +[gw3] [ 1%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option +tests/test_models_report.py::TestReportModel::test_from_simple_dict +[gw0] [ 2%] PASSED tests/test_models_report.py::TestReportModel::test_from_simple_dict +tests/test_validators.py::TestValidators::test_validate_file +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option +[gw8] [ 3%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_sanity_option tests/test_models_report_table.py::TestEmptyTable::test_str -[gw10] [ 3%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_str tests/test_models_report_plotgroup.py::TestPlotGroup::test_init -[gw6] [ 4%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_init +[gw7] [ 3%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_init tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id -[gw6] [ 5%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id -tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot -tests/test_models_report_table.py::TestTable::test_table -[gw11] [ 6%] PASSED tests/test_models_report_table.py::TestTable::test_table -tests/test_models_report_table.py::TestTable::test_add_column -[gw11] [ 7%] PASSED tests/test_models_report_table.py::TestTable::test_add_column -tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id -[gw4] [ 7%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id +[gw7] [ 4%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_null_id +[gw9] [ 5%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int +[gw4] [ 6%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_null_id tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id -[gw4] [ 8%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id +[gw4] [ 7%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_attribute_int_id tests/test_models_report_attribute.py::TestAttribute::test_to_dict -[gw4] [ 9%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_to_dict +[gw4] [ 7%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_to_dict tests/test_models_report_attribute.py::TestAttribute::test_eq +[gw4] [ 8%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_eq +tests/test_models_report_plot.py::TestPlot::test_plot_null_image +[gw5] [ 9%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_image +tests/test_models_report_plot.py::TestPlot::test_to_dict +[gw5] [ 10%] PASSED tests/test_models_report_plot.py::TestPlot::test_to_dict +tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail +tests/test_models_report_table.py::TestTable::test_table +[gw11] [ 11%] PASSED tests/test_models_report_table.py::TestTable::test_table +tests/test_models_report_table.py::TestTable::test_add_column +[gw10] [ 11%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_str tests/test_models_report_table.py::TestEmptyTable::test_columns -[gw10] [ 10%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_columns -tests/test_models_report_table.py::TestEmptyTable::test_column_values -[gw10] [ 11%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_column_values -[gw6] [ 11%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot -tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict -[gw6] [ 12%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict +[gw10] [ 12%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_columns tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int -[gw2] [ 13%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean -[gw2] [ 14%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string +[gw3] [ 13%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_coerced_value_int +tests/test_models_report.py::TestReportModel::test_report_null_ns +[gw0] [ 14%] PASSED tests/test_models_report.py::TestReportModel::test_report_null_ns tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option -[gw3] [ 15%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option +[gw2] [ 15%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_option tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option -[gw3] [ 15%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option +[gw2] [ 15%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_sanity_choice_option tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice -[gw3] [ 16%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice -[gw2] [ 17%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string -tests/test_models_report_table.py::TestTable::test_append_data -[gw11] [ 18%] PASSED tests/test_models_report_table.py::TestTable::test_append_data -tests/test_models_report.py::TestReportModel::test_from_simple_dict -[gw0] [ 19%] PASSED tests/test_models_report.py::TestReportModel::test_from_simple_dict -tests/test_models_report.py::TestReportModel::test_report_null_ns -[gw0] [ 19%] PASSED tests/test_models_report.py::TestReportModel::test_report_null_ns -tests/test_models_report.py::TestReportModel::test_report_empty_ns -[gw4] [ 20%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_eq -[gw5] [ 21%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_id -tests/test_models_report_plot.py::TestPlot::test_plot_null_image -[gw5] [ 22%] PASSED tests/test_models_report_plot.py::TestPlot::test_plot_null_image -tests/test_models_report_plot.py::TestPlot::test_to_dict -[gw5] [ 23%] PASSED tests/test_models_report_plot.py::TestPlot::test_to_dict -tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail -[gw5] [ 23%] PASSED tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail -tests/test_validators.py::TestValidators::test_validate_file_fails -[gw1] [ 24%] PASSED tests/test_validators.py::TestValidators::test_validate_file_fails -tests/test_validators.py::TestValidators::test_validate_nonempty_file -[gw1] [ 25%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file -tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +[gw2] [ 16%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices -[gw3] [ 26%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option -[gw8] [ 26%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int -[gw8] [ 27%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float -[gw8] [ 28%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float +[gw2] [ 17%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_coerce_float_choices +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string +[gw8] [ 18%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_string +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float tests/test_models_report_table.py::TestBasicTable::test_str -[gw7] [ 29%] PASSED tests/test_models_report_table.py::TestBasicTable::test_str +[gw6] [ 19%] PASSED tests/test_models_report_table.py::TestBasicTable::test_str tests/test_models_report_table.py::TestBasicTable::test_columns -[gw7] [ 30%] PASSED tests/test_models_report_table.py::TestBasicTable::test_columns +[gw6] [ 19%] PASSED tests/test_models_report_table.py::TestBasicTable::test_columns tests/test_models_report_table.py::TestBasicTable::test_column_values -[gw7] [ 30%] PASSED tests/test_models_report_table.py::TestBasicTable::test_column_values +[gw6] [ 20%] PASSED tests/test_models_report_table.py::TestBasicTable::test_column_values +[gw5] [ 21%] PASSED tests/test_models_report_plot.py::TestPlot::test_init_with_thumbnail +[gw9] [ 22%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_int +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float +[gw9] [ 23%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_float +tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot +[gw7] [ 23%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_plotgroup_add_duplicate_plot +tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict +[gw7] [ 24%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_to_dict tests/test_models_report_table.py::TestBasicTable::test_to_dict -[gw7] [ 31%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_dict -[gw0] [ 32%] PASSED tests/test_models_report.py::TestReportModel::test_report_empty_ns +[gw6] [ 25%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_dict +[gw8] [ 26%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean +[gw3] [ 26%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_boolean +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string +[gw3] [ 27%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_string +[gw11] [ 28%] PASSED tests/test_models_report_table.py::TestTable::test_add_column +tests/test_models_report_table.py::TestTable::test_append_data +[gw11] [ 29%] PASSED tests/test_models_report_table.py::TestTable::test_append_data +tests/test_models_report_plot.py::TestPlot::test_plotly_plot +[gw5] [ 30%] PASSED tests/test_models_report_plot.py::TestPlot::test_plotly_plot +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id +[gw5] [ 30%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes +tests/test_models_report_attribute.py::TestAttribute::test_repr +[gw4] [ 31%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_repr +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id +[gw4] [ 32%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid +[gw4] [ 33%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid +[gw1] [ 34%] PASSED tests/test_validators.py::TestValidators::test_validate_file +tests/test_validators.py::TestValidators::test_validate_file_fails +[gw1] [ 34%] PASSED tests/test_validators.py::TestValidators::test_validate_file_fails +tests/test_validators.py::TestValidators::test_validate_nonempty_file +[gw1] [ 35%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file +tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +tests/test_models_report_table.py::TestEmptyTable::test_column_values +[gw10] [ 36%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_column_values +tests/test_models_report.py::TestReportModel::test_report_empty_ns +[gw0] [ 37%] PASSED tests/test_models_report.py::TestReportModel::test_report_empty_ns tests/test_models_report.py::TestReportModel::test_duplicate_ids -[gw0] [ 33%] PASSED tests/test_models_report.py::TestReportModel::test_duplicate_ids +[gw0] [ 38%] PASSED tests/test_models_report.py::TestReportModel::test_duplicate_ids +tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string +[gw9] [ 38%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string +tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option +[gw9] [ 39%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option +[gw9] [ 40%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title +[gw4] [ 41%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title +[gw5] [ 42%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups +[gw5] [ 42%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups +tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices +[gw2] [ 43%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices +tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit tests/test_models_report.py::TestReportModel::test_illegal_id -[gw0] [ 34%] PASSED tests/test_models_report.py::TestReportModel::test_illegal_id +[gw0] [ 44%] PASSED tests/test_models_report.py::TestReportModel::test_illegal_id tests/test_models_report.py::TestReportModel::test_empty_id -[gw0] [ 34%] PASSED tests/test_models_report.py::TestReportModel::test_empty_id +[gw0] [ 45%] PASSED tests/test_models_report.py::TestReportModel::test_empty_id tests/test_models_report.py::TestReportModel::test_uppercase_id -[gw0] [ 35%] PASSED tests/test_models_report.py::TestReportModel::test_uppercase_id -tests/test_models_report.py::TestReportModel::test_to_dict -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float -[gw9] [ 36%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_float -[gw1] [ 37%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean +[gw8] [ 46%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean +tests/test_utils.py::TestCompose::test_simple +[gw8] [ 46%] PASSED tests/test_utils.py::TestCompose::test_simple +tests/test_utils.py::TestCompose::test_no_args_list +[gw8] [ 47%] PASSED tests/test_utils.py::TestCompose::test_no_args_list +tests/test_utils.py::TestCompose::test_empty_list +[gw1] [ 48%] PASSED tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails tests/test_validators.py::TestValidators::test_validate_output_dir -[gw1] [ 38%] PASSED tests/test_validators.py::TestValidators::test_validate_output_dir +tests/test_models_report_table.py::TestBasicTable::test_to_csv +[gw6] [ 49%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_csv +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option +[gw6] [ 50%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type +[gw7] [ 50%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type +tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option +[gw7] [ 51%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option +tests/test_models_report_table.py::TestEmptyTable::test_to_dict +[gw10] [ 52%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_to_dict +tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple +[gw3] [ 53%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple +tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option +[gw7] [ 53%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option +tests/test_models_report_table.py::TestTable::test_add_data_by_column_id +[gw11] [ 54%] PASSED tests/test_models_report_table.py::TestTable::test_add_data_by_column_id +tests/test_models_report.py::TestReportSpec::test_report_validation +[gw1] [ 55%] PASSED tests/test_validators.py::TestValidators::test_validate_output_dir tests/test_validators.py::TestValidators::test_validate_report_file -[gw1] [ 38%] PASSED tests/test_validators.py::TestValidators::test_validate_report_file +[gw1] [ 56%] PASSED tests/test_validators.py::TestValidators::test_validate_report_file +tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice +[gw9] [ 57%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice +[gw0] [ 57%] PASSED tests/test_models_report.py::TestReportModel::test_uppercase_id +tests/test_models_report.py::TestReportModel::test_to_dict +tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots +[gw5] [ 58%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots +[gw3] [ 59%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option +tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option +tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes +[gw4] [ 60%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes +tests/test_models_common.py::TestLoadFileTypes::test_file_types +[gw4] [ 61%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_file_types +tests/test_models_common.py::TestDataStore::test_datastore_file +[gw8] [ 61%] PASSED tests/test_utils.py::TestCompose::test_empty_list +[gw6] [ 62%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +[gw0] [ 63%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict +[gw2] [ 64%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit +tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins +[gw2] [ 65%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins tests/test_validators.py::TestValidators::test_validate_report -[gw0] [ 39%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict +[gw1] [ 65%] PASSED tests/test_validators.py::TestValidators::test_validate_report +tests/test_models_report_column.py::TestColumn::test_column +[gw9] [ 66%] PASSED tests/test_models_report_column.py::TestColumn::test_column +tests/test_models_common.py::TestAlarm::test_pacbio_alarm +[gw10] [ 67%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_file +[gw5] [ 68%] PASSED tests/test_models_common.py::TestAlarm::test_pacbio_alarm +[gw3] [ 69%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option tests/test_models_report.py::TestReportModel::test_version_and_changelist -[gw0] [ 40%] PASSED tests/test_models_report.py::TestReportModel::test_version_and_changelist +[gw0] [ 69%] PASSED tests/test_models_report.py::TestReportModel::test_version_and_changelist +tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float +[gw6] [ 70%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float +tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +tests/test_utils.py::TestCompose::test_partial +[gw8] [ 71%] PASSED tests/test_utils.py::TestCompose::test_partial +tests/test_models_report_column.py::TestColumn::test_repr +[gw9] [ 72%] PASSED tests/test_models_report_column.py::TestColumn::test_repr +[gw11] [ 73%] PASSED tests/test_models_report.py::TestReportSpec::test_report_validation +tests/test_models_report.py::TestReportSpec::test_format_metric tests/test_models_report.py::TestReportModel::test_load_from_file -[gw0] [ 41%] PASSED tests/test_models_report.py::TestReportModel::test_load_from_file +[gw0] [ 73%] PASSED tests/test_models_report.py::TestReportModel::test_load_from_file tests/test_models_report.py::TestReportModel::test_to_dict_multi -[gw0] [ 42%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict_multi +[gw0] [ 74%] PASSED tests/test_models_report.py::TestReportModel::test_to_dict_multi tests/test_models_report.py::TestReportModel::test_get_attribute_by_id -[gw0] [ 42%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id +tests/test_models_common.py::TestLoadFileTypes::test_is_valid +[gw4] [ 75%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_is_valid +tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +tests/test_models_common.py::TestDataStore::test_datastore_paths +[gw10] [ 76%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_paths +tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity +[gw10] [ 76%] PASSED tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity +tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice +[gw7] [ 77%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice +tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +[gw7] [ 78%] PASSED tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +[gw11] [ 79%] PASSED tests/test_models_report.py::TestReportSpec::test_format_metric +tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json +[gw8] [ 80%] PASSED tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json +tests/test_models_report.py::TestMalformedReport::test_bad_01 +tests/test_smrtlink_client.py::test_smrtlink_client_get +[gw9] [ 80%] SKIPPED tests/test_smrtlink_client.py::test_smrtlink_client_get +tests/test_validators.py::TestValidators::test_validate_report_fails +[gw1] [ 81%] PASSED tests/test_validators.py::TestValidators::test_validate_report_fails +tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice +[gw3] [ 82%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice +tests/test_utils.py::TestSingleton::test_basic +[gw3] [ 83%] PASSED tests/test_utils.py::TestSingleton::test_basic +tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option +[gw5] [ 84%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option +tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator +[gw2] [ 84%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline +[gw5] [ 85%] PASSED tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator +[gw0] [ 86%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id -[gw0] [ 43%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id +[gw0] [ 87%] PASSED tests/test_models_report.py::TestReportModel::test_get_attribute_by_id_with_bad_id +[gw6] [ 88%] PASSED tests/test_models_report.py::TestMalformedReport::test_bad_01 +[gw4] [ 88%] PASSED tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +tests/test_models_report.py::TestReportSpec::test_apply_view +tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks +[gw7] [ 89%] PASSED tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks +tests/test_utils.py::TestUtils::test_get_dataset_metadata +[gw4] [ 90%] SKIPPED tests/test_utils.py::TestUtils::test_get_dataset_metadata +[gw11] [ 91%] PASSED tests/test_models_report.py::TestReportSpec::test_apply_view tests/test_models_report.py::TestReportModel::test_get_table_by_id -[gw0] [ 44%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id +[gw0] [ 92%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id -[gw0] [ 45%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id +[gw0] [ 92%] PASSED tests/test_models_report.py::TestReportModel::test_get_table_by_id_with_bad_id tests/test_models_report.py::TestReportModel::test_get_column_by_id -[gw0] [ 46%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id +[gw0] [ 93%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id -[gw0] [ 46%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id +[gw0] [ 94%] PASSED tests/test_models_report.py::TestReportModel::test_get_column_by_id_with_bad_id tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id -[gw0] [ 47%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id +[gw0] [ 95%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id -[gw0] [ 48%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id +[gw0] [ 96%] PASSED tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id tests/test_models_report.py::TestReportModel::test_get_plot_by_id -[gw1] [ 49%] PASSED tests/test_validators.py::TestValidators::test_validate_report -[gw0] [ 50%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id +[gw0] [ 96%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id -[gw0] [ 50%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id +[gw0] [ 97%] PASSED tests/test_models_report.py::TestReportModel::test_get_plot_by_id_with_bad_id tests/test_models_report.py::TestReportModel::test_merge -[gw0] [ 51%] PASSED tests/test_models_report.py::TestReportModel::test_merge -tests/test_models_report_attribute.py::TestAttribute::test_repr -tests/test_models_report_table.py::TestEmptyTable::test_to_dict -tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type -[gw6] [ 52%] PASSED tests/test_models_report_plotgroup.py::TestPlotGroup::test_adding_incorrect_type -tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit -[gw10] [ 53%] PASSED tests/test_models_report_table.py::TestEmptyTable::test_to_dict -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id -[gw4] [ 53%] PASSED tests/test_models_report_attribute.py::TestAttribute::test_repr -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id -[gw4] [ 54%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_id -[gw6] [ 55%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_convert_to_xunit -tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid -tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple -[gw6] [ 56%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_xunit_file_to_jenkins -tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files -[gw10] [ 57%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_id -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes -[gw10] [ 57%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_attributes -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups -[gw10] [ 58%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plotgroups -[gw4] [ 59%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_uuid -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title -tests/test_models_report_table.py::TestTable::test_add_data_by_column_id -[gw11] [ 60%] PASSED tests/test_models_report_table.py::TestTable::test_add_data_by_column_id -[gw6] [ 61%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files -[gw4] [ 61%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_title -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option -[gw11] [ 62%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int -[gw2] [ 63%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_bad_value_float_tuple -tests/test_utils.py::TestCompose::test_simple -[gw2] [ 64%] PASSED tests/test_utils.py::TestCompose::test_simple -tests/test_utils.py::TestCompose::test_no_args_list -[gw2] [ 65%] PASSED tests/test_utils.py::TestCompose::test_no_args_list -tests/test_utils.py::TestCompose::test_empty_list -[gw2] [ 65%] PASSED tests/test_utils.py::TestCompose::test_empty_list -[gw11] [ 66%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int -tests/test_models_report_plot.py::TestPlot::test_plotly_plot -[gw5] [ 67%] PASSED tests/test_models_report_plot.py::TestPlot::test_plotly_plot -tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option -[gw5] [ 68%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option -tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices -[gw5] [ 69%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_sanity_choice_option -[gw3] [ 69%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_choices -tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option -[gw3] [ 70%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_option -tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string -tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option -[gw8] [ 71%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_bad_value_string -tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option -[gw8] [ 72%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_option -tests/test_models_report_table.py::TestBasicTable::test_to_csv -[gw3] [ 73%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_sanity_choice_option -tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option -[gw7] [ 73%] PASSED tests/test_models_report_table.py::TestBasicTable::test_to_csv -tests/test_models_report.py::TestReportSpec::test_report_validation -[gw8] [ 74%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_sanity_choice_option -tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean -[gw9] [ 75%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntOptionTest::test_bad_value_boolean -tests/test_validators.py::TestValidators::test_validate_report_fails -[gw1] [ 76%] PASSED tests/test_validators.py::TestValidators::test_validate_report_fails -tests/test_models_common.py::TestDataStore::test_datastore_file -[gw1] [ 76%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_file -[gw7] [ 77%] PASSED tests/test_models_report.py::TestReportSpec::test_report_validation -tests/test_models_report.py::TestReportSpec::test_format_metric -[gw7] [ 78%] PASSED tests/test_models_report.py::TestReportSpec::test_format_metric -tests/test_models_common.py::TestLoadFileTypes::test_file_types -[gw9] [ 79%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_file_types +[gw0] [ 98%] PASSED tests/test_models_report.py::TestReportModel::test_merge tests/test_models_report.py::TestReportModel::test_merge_tables -[gw0] [ 80%] PASSED tests/test_models_report.py::TestReportModel::test_merge_tables -tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline -tests/test_models_report_column.py::TestColumn::test_column -tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots -[gw0] [ 80%] PASSED tests/test_models_report_column.py::TestColumn::test_column -tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes -tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float -[gw11] [ 81%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_float -[gw10] [ 82%] PASSED tests/test_pb_io_report.py::TestSerializationAdapterReport::test_plots -tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option -[gw10] [ 83%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicOptionTest::test_sanity_option -[gw4] [ 84%] PASSED tests/test_pb_io_report.py::TestSerializationOverviewReport::test_attributes -tests/test_models_report.py::TestMalformedReport::test_bad_01 -[gw4] [ 84%] PASSED tests/test_models_report.py::TestMalformedReport::test_bad_01 -tests/test_utils.py::TestCompose::test_partial -[gw2] [ 85%] PASSED tests/test_utils.py::TestCompose::test_partial -tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice -[gw5] [ 86%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioBasicChoiceTest::test_bad_invalid_choice -tests/test_utils.py::TestLogging::test_get_parsed_args_log_level -tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks -tests/test_smrtlink_client.py::test_smrtlink_client_get -[gw2] [ 87%] SKIPPED tests/test_smrtlink_client.py::test_smrtlink_client_get -[gw11] [ 88%] PASSED tests/test_pb_io_common.py::TestWriteChunk::test_write_chunks -tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice -[gw3] [ 88%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioChoiceStringOptionTest::test_bad_invalid_choice -[gw5] [ 89%] PASSED tests/test_utils.py::TestLogging::test_get_parsed_args_log_level -tests/test_models_report.py::TestReportSpec::test_apply_view -[gw7] [ 90%] PASSED tests/test_models_report.py::TestReportSpec::test_apply_view -tests/test_models_common.py::TestLoadFileTypes::test_is_valid -[gw9] [ 91%] PASSED tests/test_models_common.py::TestLoadFileTypes::test_is_valid -tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json -[gw10] [ 92%] PASSED tests/test_models_legacy.py::TestLegacyModels::test_load_pipeline_from_json -tests/test_utils.py::TestSingleton::test_basic -[gw11] [ 92%] PASSED tests/test_utils.py::TestSingleton::test_basic -tests/test_utils.py::TestUtils::test_get_dataset_metadata -[gw5] [ 93%] SKIPPED tests/test_utils.py::TestUtils::test_get_dataset_metadata -tests/test_models_report_column.py::TestColumn::test_repr -[gw0] [ 94%] PASSED tests/test_models_report_column.py::TestColumn::test_repr -tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice -[gw8] [ 95%] PASSED tests/test_models_common_pacbio_options.py::TestPacBioIntChoiceOptionTest::test_bad_invalid_choice -tests/test_models_common.py::TestDataStore::test_datastore_paths -[gw1] [ 96%] PASSED tests/test_models_common.py::TestDataStore::test_datastore_paths -tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator -[gw2] [ 96%] PASSED tests/test_testkit.py::TestBaseUtils::test_pb_requirements_decorator -tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity -[gw4] [ 97%] PASSED tests/test_models_report.py::TestRepotSchemaVersion100WithPlots::test_sanity -[gw6] [ 98%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline -tests/test_models_common.py::TestAlarm::test_pacbio_alarm -[gw6] [ 99%] PASSED tests/test_models_common.py::TestAlarm::test_pacbio_alarm -tests/test_models_report.py::TestReportSchemaVersion100::test_sanity -[gw6] [100%] PASSED tests/test_models_report.py::TestReportSchemaVersion100::test_sanity +[gw0] [ 99%] PASSED tests/test_models_report.py::TestReportModel::test_merge_tables +[gw2] [100%] PASSED tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline =============================== warnings summary =============================== ../../../../../../usr/lib/python3/dist-packages/pbcore/__init__.py:1: 12 warnings @@ -1885,22 +1922,27 @@ Coverage XML written to file coverage.xml ============================= slowest 20 durations ============================= -0.55s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline -0.02s call tests/test_validators.py::TestValidators::test_validate_file_fails -0.01s call tests/test_models_report.py::TestReportModel::test_report_null_ns -0.01s teardown tests/test_models_common_pacbio_options.py::TestPacBioBooleanOptionTest::test_sanity_option -0.01s setup tests/test_validators.py::TestValidators::test_validate_report -0.01s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files -0.01s setup tests/test_models_report_table.py::TestBasicTable::test_str -0.01s call tests/test_validators.py::TestValidators::test_validate_output_dir -0.01s call tests/test_models_report.py::TestReportModel::test_from_simple_dict -0.01s call tests/test_models_report_table.py::TestBasicTable::test_str -0.01s setup tests/test_models_report.py::TestReportSpec::test_report_validation -0.01s call tests/test_utils.py::TestLogging::test_get_parsed_args_log_level -0.01s teardown tests/test_models_common_pacbio_options.py::TestPacBioFloatChoiceOptionTest::test_bad_invalid_choice - -(7 durations < 0.005s hidden. Use -vv to show these durations.) -================= 124 passed, 2 skipped, 12 warnings in 3.93s ================== +1.64s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files_cmdline +0.09s call tests/test_testkit_xunit.py::TestXunitOutput::test_merge_junit_files +0.08s call tests/test_utils.py::TestLogging::test_get_parsed_args_log_level +0.06s setup tests/test_models_report.py::TestReportSpec::test_report_validation +0.05s setup tests/test_utils.py::TestCompose::test_empty_list +0.05s call tests/test_models_common_pacbio_options.py::TestPacBioStringOptionTest::test_bad_value_int +0.05s teardown tests/test_models_report.py::TestReportModel::test_from_simple_dict +0.04s call tests/test_models_report.py::TestMalformedReport::test_bad_01 +0.04s call tests/test_validators.py::TestValidators::test_validate_file_fails +0.04s teardown tests/test_models_common_pacbio_options.py::TestPacBioFloatOptionTest::test_sanity_option +0.04s setup tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +0.03s call tests/test_models_report.py::TestReportModel::test_get_column_by_id +0.03s call tests/test_validators.py::TestValidators::test_validate_output_dir +0.03s call tests/test_models_report.py::TestReportModel::test_merge +0.03s call tests/test_validators.py::TestValidators::test_validate_nonempty_file_fails +0.03s setup tests/test_models_report.py::TestReportModel::test_uppercase_id +0.03s teardown tests/test_models_report.py::TestReportModel::test_get_plotgroup_by_id_with_bad_id +0.03s call tests/test_models_report.py::TestReportModel::test_merge_tables +0.03s call tests/test_models_report.py::TestReportModel::test_load_from_file +0.02s call tests/test_models_report_table.py::TestEmptyTable::test_str +================= 124 passed, 2 skipped, 12 warnings in 16.12s ================= create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1913,8 +1955,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -2107,8 +2149,8 @@ Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead. - By 2025-Mar-03, you need to update your project and remove deprecated calls - or your builds will no longer be supported. + This deprecation is overdue, please update your project and remove deprecated + calls to avoid build errors in the future. See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details. ******************************************************************************** @@ -2212,8 +2254,8 @@ creating /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services creating /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/smrtlink_client.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ -copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/_service_access_layer.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/utils.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ +copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/_service_access_layer.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/models.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__pycache__/__init__.cpython-313.pyc -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services/__pycache__ copying /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/.pybuild/cpython3_3.13_pbcommand/build/pbcommand/services/__init__.py -> /build/reproducible-path/python-pbcommand-2.1.1+git20231020.28d1635/debian/python3-pbcommand/usr/lib/python3.13/dist-packages/pbcommand/services @@ -2311,12 +2353,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1601695/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/34297 and its subdirectories -I: Current time: Mon Feb 17 08:27:53 -12 2025 -I: pbuilder-time-stamp: 1739824073 +I: removing directory /srv/workspace/pbuilder/1601695 and its subdirectories +I: Current time: Mon Mar 23 16:58:27 +14 2026 +I: pbuilder-time-stamp: 1774234707