Diff of the two buildlogs: -- --- b1/build.log 2025-09-11 14:14:09.017249697 +0000 +++ b2/build.log 2025-09-11 14:15:24.233343017 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Sep 11 02:12:07 -12 2025 -I: pbuilder-time-stamp: 1757599927 +I: Current time: Thu Oct 15 10:37:14 +14 2026 +I: pbuilder-time-stamp: 1792010234 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -24,53 +24,85 @@ dpkg-source: info: applying use-archive-xopen.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/3844498/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/D01_modify_environment starting +debug: Running on codethink03-arm64. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Oct 14 20:37 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='arm64' - DEBIAN_FRONTEND='noninteractive' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="3" [2]="3" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") + BASH_VERSION='5.3.3(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=arm64 + DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='arm64' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=aarch64 + HOST_ARCH=arm64 IFS=' ' - INVOCATION_ID='fedd31e5d5b048d58397bc0d3784938d' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='3844498' - PS1='# ' - PS2='> ' + INVOCATION_ID=391115bcdfb1414f9dbe3342b466f2b8 + LANG=C + LANGUAGE=nl_BE:nl + LC_ALL=C + MACHTYPE=aarch64-unknown-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=1792438 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xfzsJ5NA/pbuilderrc_gv9N --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xfzsJ5NA/b1 --logfile b1/build.log vcfanno_0.3.5+ds-3.dsc' - SUDO_GID='109' - SUDO_HOME='/var/lib/jenkins' - SUDO_UID='104' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://192.168.101.4:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.xfzsJ5NA/pbuilderrc_Pm8J --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.xfzsJ5NA/b2 --logfile b2/build.log vcfanno_0.3.5+ds-3.dsc' + SUDO_GID=109 + SUDO_HOME=/var/lib/jenkins + SUDO_UID=104 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://192.168.101.4:3128 I: uname -a - Linux codethink04-arm64 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux + Linux i-capture-the-hostname 6.12.43+deb13-cloud-arm64 #1 SMP Debian 6.12.43-1 (2025-08-27) aarch64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 10 12:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/3844498/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -234,7 +266,7 @@ Get: 100 http://deb.debian.org/debian unstable/main arm64 libncurses6 arm64 6.5+20250216-2 [96.1 kB] Get: 101 http://deb.debian.org/debian unstable/main arm64 samtools arm64 1.22.1-1 [666 kB] Get: 102 http://deb.debian.org/debian unstable/main arm64 tabix arm64 1.22.1+ds2-1 [469 kB] -Fetched 117 MB in 4s (29.8 MB/s) +Fetched 117 MB in 0s (289 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) @@ -657,7 +689,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-3_source.changes +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/vcfanno-0.3.5+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../vcfanno_0.3.5+ds-3_source.changes dpkg-buildpackage: info: source package vcfanno dpkg-buildpackage: info: source version 0.3.5+ds-3 dpkg-buildpackage: info: source distribution unstable @@ -681,38 +717,38 @@ dh_auto_configure -O--buildsystem=golang dh_auto_build -O--buildsystem=golang cd obj-aarch64-linux-gnu && go install -trimpath -v -p 12 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared +internal/byteorder +internal/goexperiment internal/profilerecord +internal/coverage/rtcov +internal/godebugs encoding +internal/goos internal/goarch +internal/cpu internal/asan -internal/goos -internal/goexperiment -internal/coverage/rtcov -internal/msan -internal/byteorder -internal/godebugs internal/unsafeheader +internal/msan +internal/runtime/syscall cmp internal/itoa -internal/cpu -internal/abi -internal/runtime/math -unicode/utf8 math/bits -internal/runtime/syscall +unicode/utf8 sync/atomic -unicode +internal/abi +internal/runtime/math unicode/utf16 +unicode log/internal -internal/chacha8rand github.com/dsnet/compress/bzip2/internal/sais github.com/dsnet/compress/internal -math crypto/internal/fips140/alias crypto/internal/fips140deps/byteorder -crypto/internal/fips140/subtle -github.com/klauspost/compress/internal/le crypto/internal/boring/sig +internal/chacha8rand +math +github.com/klauspost/compress/internal/le +crypto/internal/fips140/subtle github.com/ulikunitz/xz/internal/hash container/list vendor/golang.org/x/crypto/cryptobyte/asn1 @@ -722,121 +758,115 @@ internal/runtime/atomic internal/runtime/sys crypto/internal/fips140deps/cpu -internal/runtime/exithook internal/stringslite -github.com/klauspost/compress +internal/runtime/exithook internal/race internal/sync internal/runtime/maps +github.com/klauspost/compress runtime +internal/reflectlite iter crypto/subtle weak -internal/reflectlite sync -maps slices +maps +errors +sort +internal/bisect internal/testlog internal/singleflight unique -internal/bisect -errors -sort runtime/cgo -io internal/oserror path +strconv math/rand/v2 +io vendor/golang.org/x/net/dns/dnsmessage -strconv syscall internal/godebug -strings bytes hash +strings +reflect container/heap -hash/crc32 -math/rand -crypto/internal/fips140deps/godebug crypto/internal/randutil -reflect crypto +hash/crc32 hash/crc64 net/netip +math/rand +crypto/internal/fips140deps/godebug vendor/golang.org/x/text/transform +bufio github.com/brentp/irelate/interfaces regexp/syntax +github.com/dsnet/compress/internal/errors crypto/internal/fips140 crypto/internal/impl -github.com/dsnet/compress/internal/errors -bufio net/http/internal/ascii -crypto/tls/internal/fips140tls -crypto/internal/fips140/sha3 crypto/internal/fips140/sha256 +crypto/internal/fips140/sha3 crypto/internal/fips140/sha512 +crypto/tls/internal/fips140tls crypto/sha3 -github.com/dsnet/compress crypto/internal/fips140/hmac -crypto/internal/fips140/check +github.com/dsnet/compress crypto/internal/fips140hash -internal/syscall/unix -internal/syscall/execenv -time +crypto/internal/fips140/check crypto/internal/fips140/edwards25519/field +crypto/internal/fips140/aes crypto/internal/fips140/nistec/fiat -crypto/internal/fips140/hkdf -crypto/internal/fips140/tls12 crypto/internal/fips140/bigmod -crypto/internal/fips140/aes +crypto/internal/fips140/tls12 +crypto/internal/fips140/hkdf +time +internal/syscall/unix +internal/syscall/execenv crypto/internal/fips140/tls13 crypto/internal/fips140/edwards25519 regexp -crypto/internal/fips140/nistec io/fs github.com/BurntSushi/toml/internal context internal/poll +crypto/internal/fips140/nistec internal/filepathlite os -encoding/binary internal/fmtsort +encoding/binary encoding/base64 github.com/cespare/xxhash github.com/klauspost/compress/internal/snapref vendor/golang.org/x/crypto/internal/poly1305 -fmt +encoding/pem io/ioutil -path/filepath crypto/internal/sysrand +fmt +path/filepath net crypto/internal/entropy -encoding/pem crypto/internal/fips140/drbg -crypto/internal/fips140/aes/gcm crypto/internal/fips140only crypto/internal/fips140/ecdh -crypto/internal/fips140/ecdsa crypto/internal/fips140/ed25519 -crypto/internal/fips140/mlkem crypto/internal/fips140/rsa +crypto/internal/fips140/aes/gcm +crypto/internal/fips140/mlkem +crypto/internal/fips140/ecdsa os/exec -crypto/rc4 crypto/md5 +crypto/rc4 crypto/cipher -crypto/internal/boring -crypto/des vendor/golang.org/x/crypto/chacha20 -crypto/aes -crypto/sha512 -crypto/sha256 -crypto/hmac -crypto/sha1 -crypto/ecdh +crypto/des +crypto/internal/boring flag -encoding/hex encoding/json compress/flate +encoding/hex net/url encoding/csv log @@ -847,44 +877,50 @@ math/big github.com/klauspost/compress/fse runtime/debug +crypto/sha256 github.com/brentp/vcfgo github.com/yuin/gopher-lua/parse github.com/ulikunitz/xz/internal/xlog -vendor/golang.org/x/crypto/chacha20poly1305 compress/gzip github.com/klauspost/compress/flate +crypto/aes +crypto/ecdh +crypto/sha512 +github.com/dsnet/compress/bzip2 +github.com/klauspost/compress/huff0 github.com/ulikunitz/xz/lzma +github.com/biogo/hts/bgzf +crypto/hmac +vendor/golang.org/x/crypto/chacha20poly1305 +crypto/sha1 vendor/golang.org/x/text/unicode/bidi vendor/golang.org/x/text/unicode/norm -github.com/dsnet/compress/bzip2 -github.com/biogo/hts/bgzf -github.com/klauspost/compress/huff0 vendor/golang.org/x/net/http2/hpack -mime github.com/yuin/gopher-lua +mime github.com/biogo/hts/bgzf/index -vendor/golang.org/x/text/secure/bidirule mime/quotedprintable net/http/internal github.com/biogo/hts/csi github.com/biogo/hts/internal +vendor/golang.org/x/text/secure/bidirule os/user -github.com/ulikunitz/xz github.com/biogo/hts/tabix github.com/biogo/hts/sam -vendor/golang.org/x/net/idna +github.com/ulikunitz/xz github.com/BurntSushi/toml github.com/klauspost/pgzip -crypto/rand +crypto/elliptic crypto/internal/boring/bbig encoding/asn1 -crypto/elliptic crypto/dsa -github.com/klauspost/compress/zstd -crypto/ed25519 -github.com/biogo/hts/bam +crypto/rand crypto/internal/hpke +crypto/ed25519 +github.com/klauspost/compress/zstd crypto/rsa +vendor/golang.org/x/net/idna +github.com/biogo/hts/bam github.com/brentp/irelate/parsers crypto/x509/pkix vendor/golang.org/x/crypto/cryptobyte @@ -894,9 +930,9 @@ github.com/yuin/gluare github.com/brentp/goluaez github.com/brentp/vcfanno/api -crypto/x509 -net/textproto vendor/golang.org/x/net/http/httpproxy +net/textproto +crypto/x509 vendor/golang.org/x/net/http/httpguts mime/multipart crypto/tls @@ -909,10 +945,10 @@ cd obj-aarch64-linux-gnu && go test -vet=off -v -p 12 github.com/brentp/vcfanno github.com/brentp/vcfanno/api github.com/brentp/vcfanno/shared testing: warning: no tests to run PASS -ok github.com/brentp/vcfanno 0.048s [no tests to run] +ok github.com/brentp/vcfanno 0.015s [no tests to run] === RUN Test OK: 13 passed ---- PASS: Test (0.07s) +--- PASS: Test (0.01s) === RUN TestHandleA --- PASS: TestHandleA (0.00s) === RUN TestHandlAMulti @@ -920,7 +956,7 @@ === RUN TestByAlt --- PASS: TestByAlt (0.00s) PASS -ok github.com/brentp/vcfanno/api 0.093s +ok github.com/brentp/vcfanno/api 0.024s ? github.com/brentp/vcfanno/shared [no test files] create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=golang @@ -975,14 +1011,14 @@ dh_installdeb -O--buildsystem=golang dh_golang -O--buildsystem=golang dh_gencontrol -O--buildsystem=golang -dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined dpkg-gencontrol: warning: Depends field of package vcfanno-examples: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined +dpkg-gencontrol: warning: package vcfanno: substitution variable ${misc:Static-Built-Using} unused, but is defined dh_md5sums -O--buildsystem=golang dh_builddeb -O--buildsystem=golang +dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-3_arm64.deb'. dpkg-deb: building package 'vcfanno-dbgsym' in '../vcfanno-dbgsym_0.3.5+ds-3_arm64.deb'. dpkg-deb: building package 'vcfanno-examples' in '../vcfanno-examples_0.3.5+ds-3_all.deb'. -dpkg-deb: building package 'vcfanno' in '../vcfanno_0.3.5+ds-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../vcfanno_0.3.5+ds-3_arm64.buildinfo dpkg-genchanges --build=binary -O../vcfanno_0.3.5+ds-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) @@ -990,12 +1026,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/1792438/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/3844498 and its subdirectories -I: Current time: Thu Sep 11 02:14:08 -12 2025 -I: pbuilder-time-stamp: 1757600048 +I: removing directory /srv/workspace/pbuilder/1792438 and its subdirectories +I: Current time: Thu Oct 15 10:38:23 +14 2026 +I: pbuilder-time-stamp: 1792010303