Diff of the two buildlogs: -- --- b1/build.log 2024-12-24 01:27:49.479254320 +0000 +++ b2/build.log 2024-12-24 01:32:23.866751380 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Dec 23 13:20:36 -12 2024 -I: pbuilder-time-stamp: 1735003236 +I: Current time: Tue Dec 24 15:28:07 +14 2024 +I: pbuilder-time-stamp: 1735003687 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -27,52 +27,84 @@ dpkg-source: info: applying fix-underlinking.patch I: using fakeroot in build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/18001/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/D01_modify_environment starting +debug: Running on virt64z. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 24 01:28 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='f033023c5b9d47098900e8b688285cc0' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='18001' - PS1='# ' - PS2='> ' + INVOCATION_ID=a2e6eabe4b564d898ad738c59ec63392 + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=11126 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.uSAcL8FD/pbuilderrc_zW4L --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.uSAcL8FD/b1 --logfile b1/build.log libghemical_3.0.0-4.4.dsc' - SUDO_GID='113' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.uSAcL8FD/pbuilderrc_clK9 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.uSAcL8FD/b2 --logfile b2/build.log libghemical_3.0.0-4.4.dsc' + SUDO_GID=110 + SUDO_UID=103 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux ff4a 6.1.0-28-armmp-lpae #1 SMP Debian 6.1.119-1 (2024-11-22) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-28-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/18001/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -318,7 +350,7 @@ Get: 187 http://deb.debian.org/debian unstable/main armhf libsc-dev armhf 2.3.1-22+b2 [287 kB] Get: 188 http://deb.debian.org/debian unstable/main armhf mesa-common-dev armhf 24.2.8-1 [2700 kB] Get: 189 http://deb.debian.org/debian unstable/main armhf pkg-config armhf 1.8.1-4 [14.0 kB] -Fetched 114 MB in 6s (20.5 MB/s) +Fetched 114 MB in 12s (9447 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19694 files and directories currently installed.) @@ -941,8 +973,8 @@ Setting up tzdata (2024b-4) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Dec 24 01:22:16 UTC 2024. -Universal Time is now: Tue Dec 24 01:22:16 UTC 2024. +Local time is now: Tue Dec 24 01:29:14 UTC 2024. +Universal Time is now: Tue Dec 24 01:29:14 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libxcb-present0:armhf (1.17.0-2+b1) ... @@ -1125,7 +1157,11 @@ fakeroot is already the newest version (1.36.2-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package -I: Running cd /build/reproducible-path/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libghemical_3.0.0-4.4_source.changes +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/libghemical-3.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libghemical_3.0.0-4.4_source.changes dpkg-buildpackage: info: source package libghemical dpkg-buildpackage: info: source version 3.0.0-4.4 dpkg-buildpackage: info: source distribution unstable @@ -1328,7 +1364,7 @@ checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for ar... /usr/bin/ar -checking for sh... /bin/bash +checking for sh... /bin/sh checking whether make sets $(MAKE)... (cached) yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes @@ -1401,25 +1437,19 @@ config.status: executing po/stamp-it commands make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_build - make -j3 + make -j4 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making all in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make all-am make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o atom.lo atom.cpp -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o bond.lo bond.cpp -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o constraint.lo constraint.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c bond.cpp -fPIC -DPIC -o .libs/bond.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o atom.lo atom.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o bond.lo bond.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o constraint.lo constraint.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c constraint.cpp -fPIC -DPIC -o .libs/constraint.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c bond.cpp -fPIC -DPIC -o .libs/bond.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c atom.cpp -fPIC -DPIC -o .libs/atom.o -atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] - 33 | element element::current_element = element("C"); - | ^~~ -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c constraint.cpp -o constraint.o >/dev/null 2>&1 -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c atom.cpp -o atom.o >/dev/null 2>&1 -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c bond.cpp -o bond.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o model.lo model.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c model.cpp -fPIC -DPIC -o .libs/model.o In file included from local_i18n.h:38, from model.cpp:46: @@ -1453,10 +1483,10 @@ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o engine.lo engine.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c engine.cpp -fPIC -DPIC -o .libs/engine.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o typerule.lo typerule.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o +atom.cpp:33:44: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] + 33 | element element::current_element = element("C"); + | ^~~ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c constraint.cpp -o constraint.o >/dev/null 2>&1 In file included from model.cpp:31: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] @@ -1466,6 +1496,8 @@ eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c bond.cpp -o bond.o >/dev/null 2>&1 +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c atom.cpp -o atom.o >/dev/null 2>&1 eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } @@ -1482,22 +1514,16 @@ eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ -typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': -typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] - 172 | i32s tmp1[2] = { strlen(buffer), 0 }; - | ~~~~~~^~~~~~~~ model.cpp: In member function 'bool model::GetCRDSetVisible(i32u)': model.cpp:319:30: warning: control reaches end of non-void function [-Wreturn-type] 319 | else assertion_failed(__FILE__, __LINE__, "index overflow"); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] - 183 | newring[tmp1[1]] = 0; - | ~~~~~~~~~~~~~~~~~^~~ -typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []' - 182 | signed char * newring = new signed char[tmp1[1] + 1]; - | ^ -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c typerule.cpp -o typerule.o >/dev/null 2>&1 -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c engine.cpp -o engine.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o engine.lo engine.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c engine.cpp -fPIC -DPIC -o .libs/engine.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o typerule.lo typerule.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o utility.lo utility.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c typerule.cpp -fPIC -DPIC -o .libs/typerule.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c utility.cpp -fPIC -DPIC -o .libs/utility.o model.cpp: In member function 'virtual void model::RemoveAtom(iter_al)': model.cpp:636:6: note: parameter passing for argument of type 'iter_al' {aka 'std::__cxx11::list::iterator'} changed in GCC 7.1 636 | void model::RemoveAtom(iter_al it1) @@ -1510,10 +1536,10 @@ model.cpp:1960:35: note: parameter passing for argument of type 'iter_al' {aka 'std::__cxx11::list::iterator'} changed in GCC 7.1 1960 | RemoveAtom(ita1); // now this iterator is invalidated?!?!?! | ~~~~~~~~~~^~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o utility.lo utility.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c utility.cpp -fPIC -DPIC -o .libs/utility.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o chn_info.lo chn_info.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o +typerule.cpp: In member function 'i32s typerule::ReadSubRule(std::istream*, std::ostream*)': +typerule.cpp:172:56: warning: narrowing conversion of 'strlen(((const char*)((char*)(&((typerule*)this)->typerule::buffer))))' from 'size_t' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] + 172 | i32s tmp1[2] = { strlen(buffer), 0 }; + | ~~~~~~^~~~~~~~ utility.cpp: In function 'void DefineSecondaryStructure(model*)': utility.cpp:308:42: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 308 | i32s tmp1[2] = { n1, n2 }; @@ -1569,16 +1595,23 @@ utility.cpp:370:79: warning: narrowing conversion of 'n1' from 'i32u' {aka 'unsigned int'} to 'i32s' {aka 'int'} [-Wnarrowing] 370 | i32s t8a[2] = { n1, n3 - 1 }; i32s t8b[2] = { n1, n2 + 1 }; | ^~ -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c chn_info.cpp -o chn_info.o >/dev/null 2>&1 +typerule.cpp:183:50: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] + 183 | newring[tmp1[1]] = 0; + | ~~~~~~~~~~~~~~~~~^~~ +typerule.cpp:182:84: note: at offset -1 into destination object of size 0 allocated by 'operator new []' + 182 | signed char * newring = new signed char[tmp1[1] + 1]; + | ^ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c typerule.cpp -o typerule.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c utility.cpp -o utility.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o seqbuild.lo seqbuild.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c engine.cpp -o engine.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o chn_info.lo chn_info.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c chn_info.cpp -fPIC -DPIC -o .libs/chn_info.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o seqbuild.lo seqbuild.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c seqbuild.cpp -fPIC -DPIC -o .libs/seqbuild.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o mfinder.lo mfinder.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_qm.cpp -fPIC -DPIC -o .libs/eng1_qm.o In file included from local_i18n.h:38, from eng1_qm.cpp:27: @@ -1621,7 +1654,9 @@ 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_qm.cpp -o eng1_qm.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi 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-I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_qm_mpqc.cpp -fPIC -DPIC -o .libs/eng1_qm_mpqc.o In file included from local_i18n.h:38, from eng1_qm_mpqc.cpp:24: @@ -1691,9 +1726,9 @@ eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time 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-D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_qm_mpqc.cpp -o eng1_qm_mpqc.o >/dev/null 2>&1 In file included from eng1_qm_mopac.h:30, from eng1_qm_mopac.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': @@ -1725,38 +1760,40 @@ eng1_qm_mopac.cpp:181:15: warning: ignoring return value of 'int system(const char*)' declared with attribute 'warn_unused_result' [-Wunused-result] 181 | system(cs_SHUTDOWN.str().c_str()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time 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notice.cpp In file included from local_i18n.h:38, from eng2_qm_mm.cpp:24: libghemicalconfig.h:102:9: warning: "PACKAGE_NAME" redefined @@ -1789,6 +1826,7 @@ /usr/include/sc/scconfig.h:293:9: note: this is the location of the previous definition 293 | #define PACKAGE_VERSION "" | ^~~~~~~~~~~~~~~ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c notice.cpp -fPIC -DPIC -o .libs/notice.o In file included from eng2_qm_mm.h:28: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng1_qm.h:128:155: warning: no return statement in function returning non-void [-Wreturn-type] @@ -1798,6 +1836,7 @@ eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c notice.cpp -o notice.o >/dev/null 2>&1 eng2_qm_mm.h: In member function 'virtual bool eng2_qm_mm_mopac::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': eng2_qm_mm.h:90:155: warning: no return statement in function returning non-void [-Wreturn-type] 90 | virtual bool SetTorsionConstraint(atom *, atom *, atom *, atom *, f64, f64, bool) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } @@ -1814,20 +1853,15 @@ eng2_qm_mm.h:128:142: warning: no return statement in function returning non-void [-Wreturn-type] 128 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o conjgrad.lo conjgrad.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng2_qm_mm.cpp -o eng2_qm_mm.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o notice.lo notice.cpp -libtool: 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--tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o conjgrad.lo conjgrad.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c conjgrad.cpp -fPIC -DPIC -o .libs/conjgrad.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o intcrd.lo intcrd.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o +/bin/sh 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compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c intcrd.cpp -o intcrd.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o search.lo search.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c intcrd.cpp -fPIC -DPIC -o .libs/intcrd.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o search.lo search.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c search.cpp -fPIC -DPIC -o .libs/search.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o geomopt.lo geomopt.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o geomopt.lo geomopt.cpp In file included from search.h:35, from search.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': @@ -1838,6 +1872,8 @@ eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c geomopt.cpp -fPIC -DPIC -o .libs/geomopt.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c intcrd.cpp -o intcrd.o >/dev/null 2>&1 In file included from geomopt.h:31, from geomopt.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': @@ -1853,15 +1889,12 @@ search.cpp:714:32: note: parameter passing for argument of type 'iter_al' {aka 'std::__cxx11::list::iterator'} changed in GCC 7.1 714 | mdl->RemoveAtom(it1); | ~~~~~~~~~~~~~~~^~~~~ -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE 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-D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o moldyn.lo moldyn.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c search.cpp -o search.o >/dev/null 2>&1 -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c moldyn.cpp -o moldyn.o >/dev/null 2>&1 -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o pop_ana.lo pop_ana.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c moldyn.cpp -fPIC -DPIC -o .libs/moldyn.o +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o pop_ana.lo pop_ana.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c pop_ana.cpp -fPIC -DPIC -o .libs/pop_ana.o -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o sasaeval.lo sasaeval.cpp -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c eng1_sf.cpp -o eng1_sf.o >/dev/null 2>&1 In file included from pop_ana.h:31, from pop_ana.cpp:22: eng1_qm.h: In member function 'virtual bool eng1_qm::SetTorsionConstraint(atom*, atom*, atom*, atom*, f64, f64, bool)': @@ -1872,12 +1905,15 @@ eng1_qm.h:129:142: warning: no return statement in function returning non-void [-Wreturn-type] 129 | virtual bool RemoveTorsionConstraint(atom *, atom *, atom *, atom *) { assertion_failed(__FILE__, __LINE__, "not yet implemented!"); } | ^ +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c moldyn.cpp -o moldyn.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c pop_ana.cpp -o pop_ana.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o resonance.lo resonance.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o sasaeval.lo sasaeval.cpp +/bin/sh ../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\""/usr/share/locale"\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c -o resonance.lo resonance.cpp +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c sasaeval.cpp -fPIC -DPIC -o .libs/sasaeval.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c resonance.cpp -fPIC -DPIC -o .libs/resonance.o -libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c sasaeval.cpp -o sasaeval.o >/dev/null 2>&1 libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c resonance.cpp -o resonance.o >/dev/null 2>&1 -/bin/bash ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -o libghemical.la -rpath /usr/lib/arm-linux-gnueabihf atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -llapack -lblas -lm -L/usr/lib -lmopac7 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc +libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../src -I/usr/include/sc -I/usr/include/mpi -DLOCALE_DIR=\"/usr/share/locale\" -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/sc -I/usr/include/mpi -I/usr/lib/arm-linux-gnueabihf/mpich/include -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -c sasaeval.cpp -o sasaeval.o >/dev/null 2>&1 +/bin/sh ../libtool --tag=CXX --mode=link g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/libghemical-3.0.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -version-info 5:1:0 -Wl,-z,relro -Wl,--as-needed -o libghemical.la -rpath /usr/lib/arm-linux-gnueabihf atom.lo bond.lo constraint.lo model.lo engine.lo typerule.lo utility.lo chn_info.lo seqbuild.lo mfinder.lo eng1_qm.lo eng1_qm_mpqc.lo eng1_qm_mopac.lo eng1_mm.lo eng1_mm_tripos52.lo tab_mm_tripos52.lo eng1_mm_default.lo tab_mm_default.lo eng1_mm_prmfit.lo tab_mm_prmfit.lo eng1_sf.lo eng1_sf_ua.lo eng1_sf_cg.lo eng2_qm_mm.lo notice.lo conjgrad.lo intcrd.lo search.lo geomopt.lo moldyn.lo pop_ana.lo sasaeval.lo resonance.lo -llapack -lblas -lm -L/usr/lib -lmopac7 -Wl,-z,relro -Wl,-z,now -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/arm-linux-gnueabihf/14/../../../arm-linux-gnueabihf/crti.o /usr/lib/gcc/arm-linux-gnueabihf/14/crtbeginS.o .libs/atom.o .libs/bond.o .libs/constraint.o .libs/model.o .libs/engine.o .libs/typerule.o .libs/utility.o .libs/chn_info.o .libs/seqbuild.o .libs/mfinder.o .libs/eng1_qm.o .libs/eng1_qm_mpqc.o .libs/eng1_qm_mopac.o .libs/eng1_mm.o .libs/eng1_mm_tripos52.o .libs/tab_mm_tripos52.o .libs/eng1_mm_default.o .libs/tab_mm_default.o .libs/eng1_mm_prmfit.o .libs/tab_mm_prmfit.o .libs/eng1_sf.o .libs/eng1_sf_ua.o .libs/eng1_sf_cg.o .libs/eng2_qm_mm.o .libs/notice.o .libs/conjgrad.o .libs/intcrd.o .libs/search.o .libs/geomopt.o .libs/moldyn.o .libs/pop_ana.o .libs/sasaeval.o .libs/resonance.o -llapack -lblas -L/usr/lib -lmopac7 -L/usr/lib/arm-linux-gnueabihf/mpich/lib -lmpichfort -lmpich -lpthread -lhwloc -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/arm-linux-gnueabihf/14/crtendS.o /usr/lib/gcc/arm-linux-gnueabihf/14/../../../arm-linux-gnueabihf/crtn.o -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,--as-needed -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libghemical.so.5 -o .libs/libghemical.so.5.0.1 libtool: link: (cd ".libs" && rm -f "libghemical.so.5" && ln -s "libghemical.so.5.0.1" "libghemical.so.5") libtool: link: (cd ".libs" && rm -f "libghemical.so" && ln -s "libghemical.so.5.0.1" "libghemical.so") @@ -1948,7 +1984,7 @@ make[2]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' make[1]: Leaving directory '/build/reproducible-path/libghemical-3.0.0' dh_auto_test - make -j3 check "TESTSUITEFLAGS=-j3 --verbose" VERBOSE=1 + make -j4 check "TESTSUITEFLAGS=-j4 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libghemical-3.0.0' Making check in src make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' @@ -2020,7 +2056,7 @@ make[2]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' make[3]: Entering directory '/build/reproducible-path/libghemical-3.0.0/src' /usr/bin/mkdir -p '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf' - /bin/bash ../libtool --mode=install /usr/bin/install -c libghemical.la '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf' + /bin/sh ../libtool --mode=install /usr/bin/install -c libghemical.la '/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/libghemical.so.5.0.1 /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 libtool: install: (cd /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libghemical.so.5.0.1 libghemical.so.5 || { rm -f libghemical.so.5 && ln -s libghemical.so.5.0.1 libghemical.so.5; }; }) libtool: install: (cd /build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f libghemical.so.5.0.1 libghemical.so || { rm -f libghemical.so && ln -s libghemical.so.5.0.1 libghemical.so; }; }) @@ -2113,7 +2149,7 @@ linguas="de fi mk pt_BR ru sq "; \ for lang in $linguas; do \ dir=/build/reproducible-path/libghemical-3.0.0/debian/tmp/usr/share/locale/$lang/LC_MESSAGES; \ - /bin/bash /build/reproducible-path/libghemical-3.0.0/install-sh -d $dir; \ + /bin/sh /build/reproducible-path/libghemical-3.0.0/install-sh -d $dir; \ if test -r $lang.gmo; then \ /usr/bin/install -c -m 644 $lang.gmo $dir/libghemical.mo; \ echo "installing $lang.gmo as $dir/libghemical.mo"; \ @@ -2161,12 +2197,12 @@ dh_perl dh_link dh_strip_nondeterminism - Normalized debian/libghemical-data/usr/share/locale/ru/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/sq/LC_MESSAGES/libghemical.mo - Normalized debian/libghemical-data/usr/share/locale/de/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/pt_BR/LC_MESSAGES/libghemical.mo - Normalized debian/libghemical-data/usr/share/locale/mk/LC_MESSAGES/libghemical.mo Normalized debian/libghemical-data/usr/share/locale/fi/LC_MESSAGES/libghemical.mo + Normalized debian/libghemical-data/usr/share/locale/mk/LC_MESSAGES/libghemical.mo + Normalized debian/libghemical-data/usr/share/locale/ru/LC_MESSAGES/libghemical.mo + Normalized debian/libghemical-data/usr/share/locale/de/LC_MESSAGES/libghemical.mo dh_compress dh_fixperms dh_missing @@ -2193,16 +2229,16 @@ diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged -dpkg-shlibdeps: warning: symbol _ZN2sc11RegionTimer23set_default_regiontimerERKNS_3RefIS0_EE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZTIN2sc8RefCountE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc8MaterialC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc10OOGLRenderC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZNK2sc14DescribedClass10class_nameEv used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc6EFCOptC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc15PointChargeDataC1EiPKPKdS2_i used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN2sc9ThreadGrp21get_default_threadgrpEv used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN2sc14SCVectordoubleD1Ev used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN2sc12Wavefunction8integralEv used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _ZN2sc13ProcMemoryGrpC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN2sc16MolecularFormulaD1Ev used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZN2sc21DiscreteConnollyShapeC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries -dpkg-shlibdeps: warning: symbol _ZTVN2sc8RefCountE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc18SteepestDescentOptC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc11RefSCVectorC1ERKNS_14RefSCDimensionERKNS_3RefINS_11SCMatrixKitEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc11RefSCVectorD1Ev used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries +dpkg-shlibdeps: warning: symbol _ZN2sc13ConnollyShapeC1ERKNS_3RefINS_6KeyValEEE used by debian/libghemical5t64/usr/lib/arm-linux-gnueabihf/libghemical.so.5.0.1 found in none of the libraries dpkg-shlibdeps: warning: 86 other similar warnings have been skipped (use -v to see them all) dh_installdeb dh_gencontrol @@ -2219,12 +2255,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/11126/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/18001 and its subdirectories -I: Current time: Mon Dec 23 13:27:45 -12 2024 -I: pbuilder-time-stamp: 1735003665 +I: removing directory /srv/workspace/pbuilder/11126 and its subdirectories +I: Current time: Tue Dec 24 15:32:19 +14 2024 +I: pbuilder-time-stamp: 1735003939