Diff of the two buildlogs: -- --- b1/build.log 2025-02-12 00:06:25.885328953 +0000 +++ b2/build.log 2025-02-12 00:18:11.533501329 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Tue Feb 11 11:55:54 -12 2025 -I: pbuilder-time-stamp: 1739318154 +I: Current time: Wed Feb 12 14:07:47 +14 2025 +I: pbuilder-time-stamp: 1739318867 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,52 +25,84 @@ dpkg-source: info: applying python2to3_for_executables.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/18875/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/D01_modify_environment starting +debug: Running on virt64z. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Feb 12 00:08 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='armhf' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='armhf' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=armhf + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=arm + HOST_ARCH=armhf IFS=' ' - INVOCATION_ID='8ab0f153c4914c1fa75ce61970b0986e' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='18875' - PS1='# ' - PS2='> ' + INVOCATION_ID=4c1dc1d3ee254b9ab118aed80d18157d + LANG=C + LANGUAGE=it_CH:it + LC_ALL=C + MACHTYPE=arm-unknown-linux-gnueabihf + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnueabihf + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=20967 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.fCGmxFLQ/pbuilderrc_MeOM --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.fCGmxFLQ/b1 --logfile b1/build.log python-deeptools_3.5.6+dfsg-1.dsc' - SUDO_GID='112' - SUDO_UID='106' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://10.0.0.15:3142/' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.fCGmxFLQ/pbuilderrc_rvF6 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.fCGmxFLQ/b2 --logfile b2/build.log python-deeptools_3.5.6+dfsg-1.dsc' + SUDO_GID=110 + SUDO_UID=103 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://10.0.0.15:3142/ I: uname -a - Linux virt32b 6.1.0-31-armmp-lpae #1 SMP Debian 6.1.128-1 (2025-02-07) armv7l GNU/Linux + Linux i-capture-the-hostname 6.1.0-31-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/18875/tmp/hooks/D02_print_environment finished +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -355,7 +387,7 @@ Get: 219 http://deb.debian.org/debian unstable/main armhf python3-pybigwig armhf 0.3.23+dfsg-1+b2 [34.0 kB] Get: 220 http://deb.debian.org/debian unstable/main armhf python3-pysam armhf 0.23.0+ds-1 [3848 kB] Get: 221 http://deb.debian.org/debian unstable/main armhf python3-pytest all 8.3.4-1 [250 kB] -Fetched 122 MB in 6s (22.2 MB/s) +Fetched 122 MB in 30s (4093 kB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19531 files and directories currently installed.) @@ -1074,8 +1106,8 @@ Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Tue Feb 11 23:57:56 UTC 2025. -Universal Time is now: Tue Feb 11 23:57:56 UTC 2025. +Local time is now: Wed Feb 12 00:11:15 UTC 2025. +Universal Time is now: Wed Feb 12 00:11:15 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -1283,7 +1315,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/python-deeptools-3.5.6+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-deeptools_3.5.6+dfsg-1_source.changes +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/python-deeptools-3.5.6+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-deeptools_3.5.6+dfsg-1_source.changes dpkg-buildpackage: info: source package python-deeptools dpkg-buildpackage: info: source version 3.5.6+dfsg-1 dpkg-buildpackage: info: source distribution unstable @@ -1326,48 +1362,48 @@ running build running build_py creating build/lib/deeptools -copying deeptools/multiBigwigSummary.py -> build/lib/deeptools +copying deeptools/writeBedGraph.py -> build/lib/deeptools copying deeptools/writeBedGraph_bam_and_bw.py -> build/lib/deeptools -copying deeptools/mapReduce.py -> build/lib/deeptools -copying deeptools/SES_scaleFactor.py -> build/lib/deeptools -copying deeptools/multiBamSummary.py -> build/lib/deeptools -copying deeptools/plotFingerprint.py -> build/lib/deeptools -copying deeptools/plotPCA.py -> build/lib/deeptools -copying deeptools/bamCoverage.py -> build/lib/deeptools copying deeptools/plotCorrelation.py -> build/lib/deeptools -copying deeptools/__init__.py -> build/lib/deeptools -copying deeptools/bamCompare.py -> build/lib/deeptools -copying deeptools/plotCoverage.py -> build/lib/deeptools -copying deeptools/getRatio.py -> build/lib/deeptools -copying deeptools/computeMatrix.py -> build/lib/deeptools +copying deeptools/plotFingerprint.py -> build/lib/deeptools copying deeptools/getFragmentAndReadSize.py -> build/lib/deeptools -copying deeptools/writeBedGraph.py -> build/lib/deeptools -copying deeptools/getScaleFactor.py -> build/lib/deeptools -copying deeptools/correlation.py -> build/lib/deeptools -copying deeptools/bamHandler.py -> build/lib/deeptools -copying deeptools/parserCommon.py -> build/lib/deeptools -copying deeptools/estimateScaleFactor.py -> build/lib/deeptools -copying deeptools/sumCoveragePerBin.py -> build/lib/deeptools -copying deeptools/bigwigAverage.py -> build/lib/deeptools -copying deeptools/plotHeatmap.py -> build/lib/deeptools copying deeptools/utilities.py -> build/lib/deeptools -copying deeptools/correlation_heatmap.py -> build/lib/deeptools -copying deeptools/cm.py -> build/lib/deeptools -copying deeptools/heatmapper_utilities.py -> build/lib/deeptools -copying deeptools/countReadsPerBin.py -> build/lib/deeptools -copying deeptools/computeGCBias.py -> build/lib/deeptools -copying deeptools/computeMatrixOperations.py -> build/lib/deeptools copying deeptools/correctGCBias.py -> build/lib/deeptools +copying deeptools/multiBigwigSummary.py -> build/lib/deeptools +copying deeptools/sumCoveragePerBin.py -> build/lib/deeptools copying deeptools/estimateReadFiltering.py -> build/lib/deeptools +copying deeptools/correlation.py -> build/lib/deeptools +copying deeptools/heatmapper.py -> build/lib/deeptools +copying deeptools/multiBamSummary.py -> build/lib/deeptools +copying deeptools/getScaleFactor.py -> build/lib/deeptools +copying deeptools/__init__.py -> build/lib/deeptools +copying deeptools/computeMatrixOperations.py -> build/lib/deeptools copying deeptools/alignmentSieve.py -> build/lib/deeptools -copying deeptools/plotProfile.py -> build/lib/deeptools +copying deeptools/computeGCBias.py -> build/lib/deeptools +copying deeptools/bamCoverage.py -> build/lib/deeptools +copying deeptools/plotPCA.py -> build/lib/deeptools +copying deeptools/parserCommon.py -> build/lib/deeptools +copying deeptools/cm.py -> build/lib/deeptools +copying deeptools/SES_scaleFactor.py -> build/lib/deeptools copying deeptools/getScorePerBigWigBin.py -> build/lib/deeptools -copying deeptools/deeptools_list_tools.py -> build/lib/deeptools +copying deeptools/computeMatrix.py -> build/lib/deeptools +copying deeptools/correlation_heatmap.py -> build/lib/deeptools +copying deeptools/heatmapper_utilities.py -> build/lib/deeptools +copying deeptools/bamCompare.py -> build/lib/deeptools +copying deeptools/bamHandler.py -> build/lib/deeptools copying deeptools/bigwigCompare.py -> build/lib/deeptools +copying deeptools/estimateScaleFactor.py -> build/lib/deeptools +copying deeptools/plotCoverage.py -> build/lib/deeptools copying deeptools/bamPEFragmentSize.py -> build/lib/deeptools -copying deeptools/misc.py -> build/lib/deeptools +copying deeptools/mapReduce.py -> build/lib/deeptools +copying deeptools/countReadsPerBin.py -> build/lib/deeptools +copying deeptools/getRatio.py -> build/lib/deeptools +copying deeptools/plotHeatmap.py -> build/lib/deeptools +copying deeptools/deeptools_list_tools.py -> build/lib/deeptools copying deeptools/plotEnrichment.py -> build/lib/deeptools -copying deeptools/heatmapper.py -> build/lib/deeptools +copying deeptools/bigwigAverage.py -> build/lib/deeptools +copying deeptools/plotProfile.py -> build/lib/deeptools +copying deeptools/misc.py -> build/lib/deeptools running egg_info creating deepTools.egg-info writing deepTools.egg-info/PKG-INFO @@ -1389,53 +1425,53 @@ running install_lib creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/deeptools -copying build/lib/deeptools/multiBigwigSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/writeBedGraph.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/writeBedGraph_bam_and_bw.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/mapReduce.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/SES_scaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/multiBamSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/plotCorrelation.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/getRatio.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeMatrix.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/getFragmentAndReadSize.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/writeBedGraph.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/getScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/correlation.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamHandler.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/parserCommon.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/estimateScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/sumCoveragePerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bigwigAverage.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotHeatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/correlation_heatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/cm.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/heatmapper_utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/countReadsPerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeMatrixOperations.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/correctGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/multiBigwigSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/sumCoveragePerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/estimateReadFiltering.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/correlation.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/heatmapper.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/multiBamSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/getScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeMatrixOperations.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/alignmentSieve.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/parserCommon.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/cm.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/SES_scaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/getScorePerBigWigBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/deeptools_list_tools.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeMatrix.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/correlation_heatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/heatmapper_utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamHandler.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/bigwigCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/estimateScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/bamPEFragmentSize.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/misc.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/mapReduce.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/countReadsPerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/getRatio.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotHeatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/deeptools_list_tools.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/plotEnrichment.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/heatmapper.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bigwigAverage.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/misc.py -> build/bdist.linux-armv7l/wheel/./deeptools running install_egg_info Copying deepTools.egg-info to build/bdist.linux-armv7l/wheel/./deepTools-3.5.6.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/deepTools-3.5.6.dist-info/WHEEL -creating '/build/reproducible-path/python-deeptools-3.5.6+dfsg/.pybuild/cpython3_3.12_deeptools/.tmp-jskjaxo6/deepTools-3.5.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it +creating '/build/reproducible-path/python-deeptools-3.5.6+dfsg/.pybuild/cpython3_3.12_deeptools/.tmp-o57pivpi/deepTools-3.5.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'deeptools/SES_scaleFactor.py' adding 'deeptools/__init__.py' adding 'deeptools/alignmentSieve.py' @@ -1512,53 +1548,53 @@ running install_lib creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/deeptools -copying build/lib/deeptools/multiBigwigSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/writeBedGraph.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/writeBedGraph_bam_and_bw.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/mapReduce.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/SES_scaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/multiBamSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/plotCorrelation.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/getRatio.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeMatrix.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotFingerprint.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/getFragmentAndReadSize.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/writeBedGraph.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/getScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/correlation.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bamHandler.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/parserCommon.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/estimateScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/sumCoveragePerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/bigwigAverage.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotHeatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/correlation_heatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/cm.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/heatmapper_utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/countReadsPerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/computeMatrixOperations.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/correctGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/multiBigwigSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/sumCoveragePerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/estimateReadFiltering.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/correlation.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/heatmapper.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/multiBamSummary.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/getScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/__init__.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeMatrixOperations.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/alignmentSieve.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeGCBias.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotPCA.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/parserCommon.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/cm.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/SES_scaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/getScorePerBigWigBin.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/deeptools_list_tools.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/computeMatrix.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/correlation_heatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/heatmapper_utilities.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bamHandler.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/bigwigCompare.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/estimateScaleFactor.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotCoverage.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/bamPEFragmentSize.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/misc.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/mapReduce.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/countReadsPerBin.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/getRatio.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotHeatmap.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/deeptools_list_tools.py -> build/bdist.linux-armv7l/wheel/./deeptools copying build/lib/deeptools/plotEnrichment.py -> build/bdist.linux-armv7l/wheel/./deeptools -copying build/lib/deeptools/heatmapper.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/bigwigAverage.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/plotProfile.py -> build/bdist.linux-armv7l/wheel/./deeptools +copying build/lib/deeptools/misc.py -> build/bdist.linux-armv7l/wheel/./deeptools running install_egg_info Copying deepTools.egg-info to build/bdist.linux-armv7l/wheel/./deepTools-3.5.6.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/deepTools-3.5.6.dist-info/WHEEL -creating '/build/reproducible-path/python-deeptools-3.5.6+dfsg/.pybuild/cpython3_3.13_deeptools/.tmp-1fh_b8dw/deepTools-3.5.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it +creating '/build/reproducible-path/python-deeptools-3.5.6+dfsg/.pybuild/cpython3_3.13_deeptools/.tmp-o916wbyu/deepTools-3.5.6-py3-none-any.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'deeptools/SES_scaleFactor.py' adding 'deeptools/__init__.py' adding 'deeptools/alignmentSieve.py' @@ -1722,7 +1758,7 @@ ../../../deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[bam] PASSED [ 99%] ../../../deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[cram] PASSED [100%] -=================== 99 passed, 1 skipped in 71.18s (0:01:11) =================== +======================== 99 passed, 1 skipped in 48.14s ======================== I: pybuild base:311: cd /build/reproducible-path/python-deeptools-3.5.6+dfsg/.pybuild/cpython3_3.13_deeptools/build; python3.13 -m pytest -v /build/reproducible-path/python-deeptools-3.5.6+dfsg/deeptools/ ============================= test session starts ============================== platform linux -- Python 3.13.2, pytest-8.3.4, pluggy-1.5.0 -- /usr/bin/python3.13 @@ -1833,8 +1869,8 @@ ../../../deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[bam] PASSED [ 99%] ../../../deeptools/test/test_writeBedGraph.py::TestWriteBedGraph::test_writeBedGraph_cigar[cram] PASSED [100%] -=================== 99 passed, 1 skipped in 65.49s (0:01:05) =================== - rm -fr -- /tmp/dh-xdg-rundir-wvboiU7Y +======================== 99 passed, 1 skipped in 50.44s ======================== + rm -fr -- /tmp/dh-xdg-rundir-eANOrXuU create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild @@ -1893,7 +1929,7 @@ D: dh_python3 pydist:175: trying to find dependency for deeptoolsintervals>=0.1.8 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps -D: dh_python3 depends:253: D={'python3-deeptoolsintervals', 'python3-numpydoc', 'python3-pybigwig', 'python3-plotly', 'python3-scipy', 'python3:any', 'python3-matplotlib', 'python3-numpy', 'python3-pysam', 'python3-py2bit'}; R=[]; S=[]; E=[], B=[]; RT=[] +D: dh_python3 depends:253: D={'python3-numpy', 'python3-py2bit', 'python3-pysam', 'python3:any', 'python3-plotly', 'python3-numpydoc', 'python3-deeptoolsintervals', 'python3-scipy', 'python3-matplotlib', 'python3-pybigwig'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild @@ -1940,12 +1976,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/20967/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/18875 and its subdirectories -I: Current time: Tue Feb 11 12:06:21 -12 2025 -I: pbuilder-time-stamp: 1739318781 +I: removing directory /srv/workspace/pbuilder/20967 and its subdirectories +I: Current time: Wed Feb 12 14:18:07 +14 2025 +I: pbuilder-time-stamp: 1739319487