Diff of the two buildlogs: -- --- b1/build.log 2025-03-15 20:56:31.552317100 +0000 +++ b2/build.log 2025-03-15 21:01:06.591902394 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Fri Apr 17 15:18:35 -12 2026 -I: pbuilder-time-stamp: 1776482315 +I: Current time: Sun Mar 16 10:56:34 +14 2025 +I: pbuilder-time-stamp: 1742072194 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -25,54 +25,86 @@ dpkg-source: info: applying remove-signedcompare-warning.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/64109/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Mar 15 20:56 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='a5ed88a7cb2448659276e2e94a837579' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='64109' - PS1='# ' - PS2='> ' + INVOCATION_ID=96a07b4cf96744b3bb3cfd878251f68e + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=64293 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.l9w0uBrj/pbuilderrc_Voj9 --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.l9w0uBrj/b1 --logfile b1/build.log andi_0.14-3.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.l9w0uBrj/pbuilderrc_8Vvz --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.l9w0uBrj/b2 --logfile b2/build.log andi_0.14-3.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-32-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.129-1 (2025-03-06) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Mar 4 2025 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/64109/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Mar 4 11:20 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -193,7 +225,7 @@ Get: 73 http://deb.debian.org/debian unstable/main i386 libgslcblas0 i386 2.8+dfsg-5 [106 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libgsl28 i386 2.8+dfsg-5 [978 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libgsl-dev i386 2.8+dfsg-5 [1240 kB] -Fetched 39.0 MB in 0s (120 MB/s) +Fetched 39.0 MB in 1s (28.2 MB/s) Preconfiguring packages ... Selecting previously unselected package libpython3.13-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19771 files and directories currently installed.) @@ -448,8 +480,8 @@ Setting up tzdata (2025a-2) ... Current default time zone: 'Etc/UTC' -Local time is now: Sat Apr 18 03:18:54 UTC 2026. -Universal Time is now: Sat Apr 18 03:18:54 UTC 2026. +Local time is now: Sat Mar 15 20:57:52 UTC 2025. +Universal Time is now: Sat Mar 15 20:57:52 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libsysprof-capture-4-dev:i386 (48~beta-2) ... @@ -521,7 +553,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/andi-0.14/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../andi_0.14-3_source.changes +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/andi-0.14/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../andi_0.14-3_source.changes dpkg-buildpackage: info: source package andi dpkg-buildpackage: info: source version 0.14-3 dpkg-buildpackage: info: source distribution unstable @@ -663,7 +699,7 @@ config.status: executing depfiles commands make[1]: Leaving directory '/build/reproducible-path/andi-0.14' dh_auto_build - make -j22 + make -j10 make[1]: Entering directory '/build/reproducible-path/andi-0.14' Making all in . make[2]: Entering directory '/build/reproducible-path/andi-0.14' @@ -718,12 +754,6 @@ gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-esa.o `test -f '../src/esa.c' || echo './'`../src/esa.c gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-io.o `test -f '../src/io.c' || echo './'`../src/io.c gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-model.o `test -f '../src/model.c' || echo './'`../src/model.c -gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-process.o `test -f '../src/process.c' || echo './'`../src/process.c -gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-sequence.o `test -f '../src/sequence.c' || echo './'`../src/sequence.c -../src/process.c: In function 'anchor': -../src/process.c:114:72: warning: unused parameter 'last_match' [-Wunused-parameter] - 114 | const struct anchor *last_match, - | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ ../src/sequence.c: In function 'normalize': ../src/sequence.c:279: warning: ignoring '#pragma omp atomic' [-Wunknown-pragmas] 279 | #pragma omp atomic @@ -751,6 +781,12 @@ test_esa.c:176:45: warning: unused parameter 'test_data' [-Wunused-parameter] 176 | void prefix( esa_fixture *ef, gconstpointer test_data){ | ~~~~~~~~~~~~~~^~~~~~~~~ +gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-process.o `test -f '../src/process.c' || echo './'`../src/process.c +gcc -DHAVE_CONFIG_H -I. -I../src -fopenmp -I../src -I../opt -I../libs -DDEBUG -std=gnu99 -Wdate-time -D_FORTIFY_SOURCE=2 -fms-extensions -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -c -o test_process-sequence.o `test -f '../src/sequence.c' || echo './'`../src/sequence.c +../src/process.c: In function 'anchor': +../src/process.c:114:72: warning: unused parameter 'last_match' [-Wunused-parameter] + 114 | const struct anchor *last_match, + | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ gcc -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o test_seq test_seq-test_seq.o test_seq-sequence.o -lglib-2.0 ../opt/libcompat.a -ldivsufsort -lgsl -lgslcblas -lm gcc -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o test_esa test_esa-test_esa.o test_esa-esa.o test_esa-sequence.o -lglib-2.0 ../opt/libcompat.a -ldivsufsort -lgsl -lgslcblas -lm gcc -fopenmp -Wall -Wextra -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -Wno-missing-field-initializers -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/andi-0.14=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o test_process test_process-test_process.o test_process-esa.o test_process-io.o test_process-model.o test_process-process.o test_process-sequence.o -lglib-2.0 ../opt/libcompat.a ../libs/libpfasta.a -ldivsufsort -lgsl -lgslcblas -lm @@ -758,7 +794,7 @@ make[2]: Leaving directory '/build/reproducible-path/andi-0.14/test' make[1]: Leaving directory '/build/reproducible-path/andi-0.14' dh_auto_test - make -j22 check "TESTSUITEFLAGS=-j22 --verbose" VERBOSE=1 + make -j10 check "TESTSUITEFLAGS=-j10 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/andi-0.14' Making check in . make[2]: Entering directory '/build/reproducible-path/andi-0.14' @@ -816,7 +852,7 @@ create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/andi/ - make -j22 install DESTDIR=/build/reproducible-path/andi-0.14/debian/andi AM_UPDATE_INFO_DIR=no + make -j10 install DESTDIR=/build/reproducible-path/andi-0.14/debian/andi AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/andi-0.14' Making install in . make[2]: Entering directory '/build/reproducible-path/andi-0.14' @@ -843,8 +879,8 @@ Making install in src make[2]: Entering directory '/build/reproducible-path/andi-0.14/src' make[3]: Entering directory '/build/reproducible-path/andi-0.14/src' -make[3]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/andi-0.14/debian/andi/usr/bin' +make[3]: Nothing to be done for 'install-data-am'. /usr/bin/install -c andi '/build/reproducible-path/andi-0.14/debian/andi/usr/bin' make[3]: Leaving directory '/build/reproducible-path/andi-0.14/src' make[2]: Leaving directory '/build/reproducible-path/andi-0.14/src' @@ -890,12 +926,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/64293/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/64109 and its subdirectories -I: Current time: Fri Apr 17 15:19:30 -12 2026 -I: pbuilder-time-stamp: 1776482370 +I: removing directory /srv/workspace/pbuilder/64293 and its subdirectories +I: Current time: Sun Mar 16 11:01:05 +14 2025 +I: pbuilder-time-stamp: 1742072465