Diff of the two buildlogs: -- --- b1/build.log 2025-01-24 11:29:36.884492024 +0000 +++ b2/build.log 2025-01-24 11:48:38.957116874 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Thu Feb 26 05:42:09 -12 2026 -I: pbuilder-time-stamp: 1772127729 +I: Current time: Sat Jan 25 01:29:45 +14 2025 +I: pbuilder-time-stamp: 1737718185 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -30,54 +30,86 @@ dpkg-source: info: applying remove-recogniser-tests.patch I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/11109/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/D01_modify_environment starting +debug: Running on ionos2-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Jan 24 11:30 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=22 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.37(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='8ad75cf174934b47a36f267727a43608' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='11109' - PS1='# ' - PS2='> ' + INVOCATION_ID=16f17062be894ec2818073e18056142c + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=13393 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7nuACe0w/pbuilderrc_mZlQ --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7nuACe0w/b1 --logfile b1/build.log oscar4_5.2.0+dfsg-3.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://213.165.73.152:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.7nuACe0w/pbuilderrc_35CC --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.7nuACe0w/b2 --logfile b2/build.log oscar4_5.2.0+dfsg-3.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://46.16.76.132:3128 I: uname -a - Linux ionos16-i386 6.1.0-30-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.124-1 (2025-01-12) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-30-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.124-1 (2025-01-12) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/11109/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -458,7 +490,7 @@ Get: 315 http://deb.debian.org/debian unstable/main i386 maven-repo-helper all 1.11 [142 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 unzip i386 6.0-28 [166 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 maven-debian-helper all 2.6.7 [108 kB] -Fetched 368 MB in 5s (71.5 MB/s) +Fetched 368 MB in 7s (55.5 MB/s) Preconfiguring packages ... Selecting previously unselected package libsystemd-shared:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19818 files and directories currently installed.) @@ -1957,7 +1989,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/oscar4-5.2.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../oscar4_5.2.0+dfsg-3_source.changes +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/oscar4-5.2.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../oscar4_5.2.0+dfsg-3_source.changes dpkg-buildpackage: info: source package oscar4 dpkg-buildpackage: info: source version 5.2.0+dfsg-3 dpkg-buildpackage: info: source distribution unstable @@ -2585,24 +2621,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.218 s] -[INFO] oscar4-core ........................................ SUCCESS [ 2.329 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.816 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 1.222 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.358 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.888 s] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.675 s] -[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.216 s] -[INFO] oscar4-opsin ....................................... SUCCESS [ 0.152 s] -[INFO] oscar4-api ......................................... SUCCESS [ 0.182 s] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.073 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.061 s] -[INFO] oscar4-data ........................................ SUCCESS [ 0.174 s] +[INFO] oscar4-parent ...................................... SUCCESS [ 0.833 s] +[INFO] oscar4-core ........................................ SUCCESS [ 11.846 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 1.883 s] +[INFO] oscar4-obo ......................................... SUCCESS [ 2.554 s] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.804 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [ 2.315 s] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 1.741 s] +[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.534 s] +[INFO] oscar4-opsin ....................................... SUCCESS [ 0.759 s] +[INFO] oscar4-api ......................................... SUCCESS [ 0.988 s] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.535 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.264 s] +[INFO] oscar4-data ........................................ SUCCESS [ 0.706 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 7.505 s -[INFO] Finished at: 2026-02-26T17:43:10Z +[INFO] Total time: 26.257 s +[INFO] Finished at: 2025-01-24T11:32:07Z [INFO] ------------------------------------------------------------------------ dh_auto_test /usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/oscar4-5.2.0\+dfsg -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/oscar4-5.2.0\+dfsg/debian -Dmaven.repo.local=/build/reproducible-path/oscar4-5.2.0\+dfsg/debian/maven-repo --batch-mode test @@ -2657,37 +2693,37 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest -[WARNING] Tests run: 9, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.122 s - in uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest -[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.11 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.xmltools.XOMToolsTest -[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.xmltools.XOMToolsTest +[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.xmltools.XOMToolsTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.document.TokenTest [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.NamedEntitityTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.document.TokenSequenceTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 23, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.194 s - in uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizerTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.normalize.NormalizingReaderTest +[INFO] Tests run: 23, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.511 s - in uk.ac.cam.ch.wwmm.oscar.terms.TermSetsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest +[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.009 s - in uk.ac.cam.ch.wwmm.oscar.tools.StringToolsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.168 s - in uk.ac.cam.ch.wwmm.oscar.tools.StandoffTableTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest +[WARNING] Tests run: 9, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.061 s - in uk.ac.cam.ch.wwmm.oscar.tools.ResourceGetterTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest [INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.types.NamedEntityTypeTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.types.BioTagTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.types.BioTagTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscar.types.BioTagTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.types.BioTypeTest [INFO] Tests run: 14, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.types.BioTypeTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.util.CacheMapTest [INFO] [INFO] Results: [INFO] @@ -2718,27 +2754,27 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.228 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.007 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.139 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.738 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.tools.ResourceGetterTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.545 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ImmutableChemNameDictTest +[INFO] Tests run: 18, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.634 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.ChemNameDictRegistryTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ResolvedNamedEntityTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.entities.ChemicalStructureTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.core.MutableChemNameDictTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.ChEBIDictionaryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.042 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.DefaultDictionaryTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.023 s - in uk.ac.cam.ch.wwmm.oscar.chemnamedict.dictionaries.PolymerDictionaryTest [INFO] [INFO] Results: [INFO] @@ -2769,17 +2805,17 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.07 s - in uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest -[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.553 s - in uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.431 s - in uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.536 s - in uk.ac.cam.ch.wwmm.oscar.ont.OntologyTermsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest +[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.252 s - in uk.ac.cam.ch.wwmm.oscar.ont.TermsFileReaderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscar.ont.EquivalentTermSetTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 12.769 s - in uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 71.932 s - in uk.ac.cam.ch.wwmm.oscar.obo.OBOOntologyTest [INFO] [INFO] Results: [INFO] @@ -2810,19 +2846,19 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.401 s - in uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest -[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.002 s - in uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest -[INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest -[WARNING] Tests run: 35, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.412 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.864 s - in uk.ac.cam.ch.wwmm.oscar.document.ProcessingDocumentFactoryTest +[INFO] Running uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest +[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 s - in uk.ac.cam.ch.wwmm.oscar.document.AdditionalTokenSequenceTest [INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.008 s - in uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.847 s - in uk.ac.cam.ch.wwmm.oscartokeniser.HyphenTokeniserTest [INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.031 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.065 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokenClassifierTest +[INFO] Running uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest +[WARNING] Tests run: 35, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.126 s - in uk.ac.cam.ch.wwmm.oscartokeniser.TokeniserTest [INFO] [INFO] Results: [INFO] @@ -2853,29 +2889,29 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.415 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.776 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest -[WARNING] Tests run: 8, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 4.427 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest +[WARNING] Tests run: 11, Failures: 0, Errors: 0, Skipped: 3, Time elapsed: 35.341 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest +[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.017 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.014 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.TermMapsTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest +[WARNING] Tests run: 8, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 11.587 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAFinderTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest -[WARNING] Tests run: 6, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.009 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest +[WARNING] Tests run: 6, Failures: 0, Errors: 0, Skipped: 1, Time elapsed: 0.011 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFASupplementaryTermFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest +[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.972 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.DFAONTCPRFinderTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.finder.AutomatonStateTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest -[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.004 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest +[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.34 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.regex.RegexRecogniserTest [INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest -[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest -[WARNING] Tests run: 11, Failures: 0, Errors: 0, Skipped: 3, Time elapsed: 21.435 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.NGramBuilderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest -[INFO] Tests run: 4, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.tokenanalysis.PrefixFinderTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.265 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.extractedtrainingdata.ExtractedTrainingDataTest +[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscarrecogniser.saf.StandoffResolverTest [INFO] [INFO] Results: [INFO] @@ -2906,23 +2942,23 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.057 s - in uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 36.87 s - in uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.099 s - in uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest -[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.658 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.837 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.PubMedModelTest [INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest -[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.829 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest +[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.952 s - in uk.ac.cam.ch.wwmm.oscarMEMM.models.ChemPapersModelTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscarMEMM.rescorer.ProbabilityConvertorTest [INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest -[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 7.111 s - in uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest +[INFO] Tests run: 13, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 14.615 s - in uk.ac.cam.ch.wwmm.oscarMEMM.Oscar4RegressionTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.001 s - in uk.ac.cam.ch.wwmm.oscarMEMM.ResourceGetterTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.855 s - in uk.ac.cam.ch.wwmm.oscarMEMM.memm.MEMMModelTest +[INFO] Running uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest +[INFO] Tests run: 31, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 66.714 s - in uk.ac.cam.ch.wwmm.oscarMEMM.MEMMRecogniserTest [INFO] [INFO] Results: [INFO] @@ -2957,7 +2993,7 @@ SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 59.316 s - in uk.ac.cam.ch.wwmm.oscarpattern.PatternRecogniserTest +[INFO] Tests run: 22, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 123.514 s - in uk.ac.cam.ch.wwmm.oscarpattern.PatternRecogniserTest [INFO] [INFO] Results: [INFO] @@ -2989,12 +3025,12 @@ [INFO] T E S T S [INFO] ------------------------------------------------------- [INFO] Running uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest -[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.029 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest +[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.862 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinDictionaryTest [INFO] Running uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.57 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.141 s - in uk.ac.cam.ch.wwmm.oscar.opsin.OpsinResolutionTest [INFO] [INFO] Results: [INFO] @@ -3029,7 +3065,7 @@ SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 50.903 s - in uk.ac.cam.ch.wwmm.oscar.OscarTest +[INFO] Tests run: 19, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 119.343 s - in uk.ac.cam.ch.wwmm.oscar.OscarTest [INFO] [INFO] Results: [INFO] @@ -3061,7 +3097,7 @@ [INFO] T E S T S [INFO] ------------------------------------------------------- [INFO] Running uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.068 s - in uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.161 s - in uk.ac.cam.ch.wwmm.oscarpreprocessor.InputAnalyzerTest [INFO] [INFO] Results: [INFO] @@ -3114,19 +3150,19 @@ [INFO] ------------------------------------------------------- [INFO] T E S T S [INFO] ------------------------------------------------------- -[INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest +[INFO] Running uk.ac.cam.ch.wwmm.oscardata.RPNodeTest SLF4J: Failed to load class "org.slf4j.impl.StaticLoggerBinder". SLF4J: Defaulting to no-operation (NOP) logger implementation SLF4J: See http://www.slf4j.org/codes.html#StaticLoggerBinder for further details. -[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.056 s - in uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest -[INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataParserTest -[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.058 s - in uk.ac.cam.ch.wwmm.oscardata.DataParserTest -[INFO] Running uk.ac.cam.ch.wwmm.oscardata.RPNodeTest -[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.005 s - in uk.ac.cam.ch.wwmm.oscardata.RPNodeTest +[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.086 s - in uk.ac.cam.ch.wwmm.oscardata.RPNodeTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.015 s - in uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.05 s - in uk.ac.cam.ch.wwmm.oscardata.RegexValidationTest +[INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest +[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.911 s - in uk.ac.cam.ch.wwmm.oscardata.DataAnnotationTest +[INFO] Running uk.ac.cam.ch.wwmm.oscardata.DataParserTest +[INFO] Tests run: 10, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.216 s - in uk.ac.cam.ch.wwmm.oscardata.DataParserTest [INFO] Running uk.ac.cam.ch.wwmm.oscardata.OscarDataTest -[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.003 s - in uk.ac.cam.ch.wwmm.oscardata.OscarDataTest +[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in uk.ac.cam.ch.wwmm.oscardata.OscarDataTest [INFO] [INFO] Results: [INFO] @@ -3135,24 +3171,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.232 s] -[INFO] oscar4-core ........................................ SUCCESS [ 31.473 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 31.313 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 44.488 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 31.439 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [01:00 min] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [01:23 min] -[INFO] oscar4-patternrecogniser ........................... SUCCESS [01:30 min] -[INFO] oscar4-opsin ....................................... SUCCESS [ 32.339 s] -[INFO] oscar4-api ......................................... SUCCESS [01:21 min] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 30.666 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.042 s] -[INFO] oscar4-data ........................................ SUCCESS [ 31.733 s] +[INFO] oscar4-parent ...................................... SUCCESS [ 0.491 s] +[INFO] oscar4-core ........................................ SUCCESS [ 33.764 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 38.880 s] +[INFO] oscar4-obo ......................................... SUCCESS [01:59 min] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 50.615 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [01:39 min] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [02:33 min] +[INFO] oscar4-patternrecogniser ........................... SUCCESS [02:42 min] +[INFO] oscar4-opsin ....................................... SUCCESS [ 44.412 s] +[INFO] oscar4-api ......................................... SUCCESS [02:34 min] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 52.979 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.553 s] +[INFO] oscar4-data ........................................ SUCCESS [ 35.687 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 09:09 min -[INFO] Finished at: 2026-02-26T17:52:22Z +[INFO] Total time: 15:48 min +[INFO] Finished at: 2025-01-24T11:47:59Z [INFO] ------------------------------------------------------------------------ create-stamp debian/debhelper-build-stamp dh_prep @@ -3348,24 +3384,24 @@ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for oscar4-parent 5.2.0: [INFO] -[INFO] oscar4-parent ...................................... SUCCESS [ 0.341 s] -[INFO] oscar4-core ........................................ SUCCESS [ 0.040 s] -[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.034 s] -[INFO] oscar4-obo ......................................... SUCCESS [ 0.043 s] -[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.025 s] -[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.031 s] -[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.031 s] -[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.024 s] -[INFO] oscar4-opsin ....................................... SUCCESS [ 0.025 s] -[INFO] oscar4-api ......................................... SUCCESS [ 0.025 s] -[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.031 s] -[INFO] oscar4-formatter ................................... SUCCESS [ 0.023 s] -[INFO] oscar4-data ........................................ SUCCESS [ 0.023 s] +[INFO] oscar4-parent ...................................... SUCCESS [ 1.062 s] +[INFO] oscar4-core ........................................ SUCCESS [ 0.115 s] +[INFO] Chemical Name Dictionaries ......................... SUCCESS [ 0.185 s] +[INFO] oscar4-obo ......................................... SUCCESS [ 0.102 s] +[INFO] oscar4-tokenizer ................................... SUCCESS [ 0.052 s] +[INFO] oscar4-recogniser-core ............................. SUCCESS [ 0.070 s] +[INFO] oscar4-memmrecogniser .............................. SUCCESS [ 0.065 s] +[INFO] oscar4-patternrecogniser ........................... SUCCESS [ 0.048 s] +[INFO] oscar4-opsin ....................................... SUCCESS [ 0.049 s] +[INFO] oscar4-api ......................................... SUCCESS [ 0.046 s] +[INFO] oscar4-preprocessor ................................ SUCCESS [ 0.083 s] +[INFO] oscar4-formatter ................................... SUCCESS [ 0.042 s] +[INFO] oscar4-data ........................................ SUCCESS [ 0.052 s] [INFO] ------------------------------------------------------------------------ [INFO] BUILD SUCCESS [INFO] ------------------------------------------------------------------------ -[INFO] Total time: 0.872 s -[INFO] Finished at: 2026-02-26T17:52:24Z +[INFO] Total time: 2.462 s +[INFO] Finished at: 2025-01-24T11:48:08Z [INFO] ------------------------------------------------------------------------ mh_resolve_dependencies --non-interactive --offline --build -pliboscar4-java --base-directory=/build/reproducible-path/oscar4-5.2.0\+dfsg --non-explore Analysing pom.xml... @@ -3415,12 +3451,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/13393/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/11109 and its subdirectories -I: Current time: Thu Feb 26 05:52:36 -12 2026 -I: pbuilder-time-stamp: 1772128356 +I: removing directory /srv/workspace/pbuilder/13393 and its subdirectories +I: Current time: Sat Jan 25 01:48:37 +14 2025 +I: pbuilder-time-stamp: 1737719317