Diff of the two buildlogs: -- --- b1/build.log 2024-11-18 17:46:56.415156904 +0000 +++ b2/build.log 2024-11-18 17:56:15.553894871 +0000 @@ -1,6 +1,6 @@ I: pbuilder: network access will be disabled during build -I: Current time: Mon Nov 18 05:45:23 -12 2024 -I: pbuilder-time-stamp: 1731951923 +I: Current time: Mon Dec 22 14:10:06 +14 2025 +I: pbuilder-time-stamp: 1766362206 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration @@ -26,54 +26,86 @@ dpkg-source: info: unpacking svim_2.0.0-3.debian.tar.xz I: Not using root during the build. I: Installing the build-deps -I: user script /srv/workspace/pbuilder/61007/tmp/hooks/D02_print_environment starting +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/D01_modify_environment starting +debug: Running on ionos16-i386. +I: Changing host+domainname to test build reproducibility +I: Adding a custom variable just for the fun of it... +I: Changing /bin/sh to bash +'/bin/sh' -> '/bin/bash' +lrwxrwxrwx 1 root root 9 Dec 22 00:11 /bin/sh -> /bin/bash +I: Setting pbuilder2's login shell to /bin/bash +I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/D01_modify_environment finished +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/D02_print_environment starting I: set - BUILDDIR='/build/reproducible-path' - BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' - BUILDUSERNAME='pbuilder1' - BUILD_ARCH='i386' - DEBIAN_FRONTEND='noninteractive' - DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=11 ' - DISTRIBUTION='unstable' - HOME='/root' - HOST_ARCH='i386' + BASH=/bin/sh + BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath + BASH_ALIASES=() + BASH_ARGC=() + BASH_ARGV=() + BASH_CMDS=() + BASH_LINENO=([0]="12" [1]="0") + BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. + BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") + BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") + BASH_VERSION='5.2.32(1)-release' + BUILDDIR=/build/reproducible-path + BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' + BUILDUSERNAME=pbuilder2 + BUILD_ARCH=i386 + DEBIAN_FRONTEND=noninteractive + DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' + DIRSTACK=() + DISTRIBUTION=unstable + EUID=0 + FUNCNAME=([0]="Echo" [1]="main") + GROUPS=() + HOME=/root + HOSTNAME=i-capture-the-hostname + HOSTTYPE=i686 + HOST_ARCH=i386 IFS=' ' - INVOCATION_ID='50e0916adb004b50a2f2da70c88bf0e8' - LANG='C' - LANGUAGE='en_US:en' - LC_ALL='C' - LD_LIBRARY_PATH='/usr/lib/libeatmydata' - LD_PRELOAD='libeatmydata.so' - MAIL='/var/mail/root' - OPTIND='1' - PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' - PBCURRENTCOMMANDLINEOPERATION='build' - PBUILDER_OPERATION='build' - PBUILDER_PKGDATADIR='/usr/share/pbuilder' - PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' - PBUILDER_SYSCONFDIR='/etc' - PPID='61007' - PS1='# ' - PS2='> ' + INVOCATION_ID=0714e7d1005d4b9b83575f9e9d70675e + LANG=C + LANGUAGE=de_CH:de + LC_ALL=C + LD_LIBRARY_PATH=/usr/lib/libeatmydata + LD_PRELOAD=libeatmydata.so + MACHTYPE=i686-pc-linux-gnu + MAIL=/var/mail/root + OPTERR=1 + OPTIND=1 + OSTYPE=linux-gnu + PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + PBCURRENTCOMMANDLINEOPERATION=build + PBUILDER_OPERATION=build + PBUILDER_PKGDATADIR=/usr/share/pbuilder + PBUILDER_PKGLIBDIR=/usr/lib/pbuilder + PBUILDER_SYSCONFDIR=/etc + PIPESTATUS=([0]="0") + POSIXLY_CORRECT=y + PPID=22185 PS4='+ ' - PWD='/' - SHELL='/bin/bash' - SHLVL='2' - SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1bUFpm5Y/pbuilderrc_Wmtq --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1bUFpm5Y/b1 --logfile b1/build.log svim_2.0.0-3.dsc' - SUDO_GID='112' - SUDO_UID='107' - SUDO_USER='jenkins' - TERM='unknown' - TZ='/usr/share/zoneinfo/Etc/GMT+12' - USER='root' - _='/usr/bin/systemd-run' - http_proxy='http://46.16.76.132:3128' + PWD=/ + SHELL=/bin/bash + SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix + SHLVL=3 + SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.1bUFpm5Y/pbuilderrc_t47P --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.1bUFpm5Y/b2 --logfile b2/build.log svim_2.0.0-3.dsc' + SUDO_GID=112 + SUDO_UID=107 + SUDO_USER=jenkins + TERM=unknown + TZ=/usr/share/zoneinfo/Etc/GMT-14 + UID=0 + USER=root + _='I: set' + http_proxy=http://213.165.73.152:3128 I: uname -a - Linux ionos2-i386 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux + Linux i-capture-the-hostname 6.1.0-27-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.115-1 (2024-11-01) x86_64 GNU/Linux I: ls -l /bin - lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin -I: user script /srv/workspace/pbuilder/61007/tmp/hooks/D02_print_environment finished + lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy @@ -287,7 +319,7 @@ Get: 156 http://deb.debian.org/debian unstable/main i386 python3-matplotlib i386 3.8.3-3+b1 [5660 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 python3-pysam i386 0.22.1+ds-2+b2 [4429 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 python3-pyspoa i386 0.0.10-1+b3 [82.9 kB] -Fetched 103 MB in 1s (73.7 MB/s) +Fetched 103 MB in 14s (7415 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19952 files and directories currently installed.) @@ -814,8 +846,8 @@ Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' -Local time is now: Mon Nov 18 17:45:57 UTC 2024. -Universal Time is now: Mon Nov 18 17:45:57 UTC 2024. +Local time is now: Mon Dec 22 00:13:20 UTC 2025. +Universal Time is now: Mon Dec 22 00:13:20 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... @@ -953,7 +985,11 @@ Building tag database... -> Finished parsing the build-deps I: Building the package -I: Running cd /build/reproducible-path/svim-2.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../svim_2.0.0-3_source.changes +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/A99_set_merged_usr starting +Not re-configuring usrmerge for unstable +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/A99_set_merged_usr finished +hostname: Name or service not known +I: Running cd /build/reproducible-path/svim-2.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../svim_2.0.0-3_source.changes dpkg-buildpackage: info: source package svim dpkg-buildpackage: info: source version 2.0.0-3 dpkg-buildpackage: info: source distribution unstable @@ -981,32 +1017,32 @@ I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py -creating /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_genotyping.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_inter.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_plot.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_alignment.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_input_parsing.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_COMBINE.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_clustering.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVCandidate.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_intra.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_merging.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVSignature.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/__init__.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_COLLECT.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim -copying src/svim/SVIM_CLUSTER.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim creating /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/test_input_parsing.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/test_intra.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests copying src/tests/test_Signature.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/test_Collect.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/test_SVCandidate.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/__init__.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests -copying src/tests/test_clustering.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests copying src/tests/test_satag.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests copying src/tests/test_consensus.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/test_Collect.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests copying src/tests/test_inter.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/test_intra.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/__init__.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/test_clustering.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/test_input_parsing.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +copying src/tests/test_SVCandidate.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests +creating /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_input_parsing.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_intra.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_alignment.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_plot.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVCandidate.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_clustering.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_CLUSTER.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/__init__.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_inter.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVSignature.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_COLLECT.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_genotyping.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_merging.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim +copying src/svim/SVIM_COMBINE.py -> /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim running build_scripts creating build/scripts-3.12 copying and adjusting src/svim/svim -> build/scripts-3.12 @@ -1042,7 +1078,7 @@ test_satag_length (test_satag.TestSAExtraction.test_satag_length) ... ok ---------------------------------------------------------------------- -Ran 25 tests in 1.303s +Ran 25 tests in 7.506s OK make[1]: Leaving directory '/build/reproducible-path/svim-2.0.0' @@ -1070,67 +1106,67 @@ running build_scripts running install_lib creating /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages +creating /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_Signature.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_satag.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_consensus.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_Collect.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_inter.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_intra.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/__init__.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_clustering.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_input_parsing.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_SVCandidate.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests creating /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_genotyping.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_inter.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_plot.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_input_parsing.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_intra.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_alignment.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_plot.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVCandidate.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_clustering.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_CLUSTER.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__init__.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_inter.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVSignature.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim creating /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVSignature.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVCandidate.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_COLLECT.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_intra.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_merging.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVSignature.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_input_parsing.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_clustering.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_COMBINE.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_inter.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_clustering.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVCandidate.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_input_parsing.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_merging.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__pycache__/SVIM_COLLECT.cpython-312.pyc -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__pycache__ -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_input_parsing.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_COMBINE.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_clustering.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVCandidate.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_intra.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_merging.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVSignature.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/__init__.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_COLLECT.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_CLUSTER.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim -creating /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_input_parsing.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_intra.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_Signature.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_Collect.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_SVCandidate.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/__init__.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_clustering.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_satag.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_consensus.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/tests/test_inter.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_genotyping.py to SVIM_genotyping.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_inter.py to SVIM_inter.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_plot.py to SVIM_plot.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_alignment.py to SVIM_alignment.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_input_parsing.py to SVIM_input_parsing.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_COMBINE.py to SVIM_COMBINE.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_clustering.py to SVIM_clustering.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVCandidate.py to SVCandidate.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_intra.py to SVIM_intra.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_merging.py to SVIM_merging.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVSignature.py to SVSignature.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__init__.py to __init__.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_COLLECT.py to SVIM_COLLECT.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_CLUSTER.py to SVIM_CLUSTER.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_input_parsing.py to test_input_parsing.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_intra.py to test_intra.cpython-312.pyc +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_genotyping.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_merging.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim +copying /build/reproducible-path/svim-2.0.0/.pybuild/cpython3_3.12/build/svim/SVIM_COMBINE.py -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_Signature.py to test_Signature.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_Collect.py to test_Collect.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_SVCandidate.py to test_SVCandidate.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/__init__.py to __init__.cpython-312.pyc -byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_clustering.py to test_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_satag.py to test_satag.cpython-312.pyc byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_consensus.py to test_consensus.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_Collect.py to test_Collect.cpython-312.pyc byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_inter.py to test_inter.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_intra.py to test_intra.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_clustering.py to test_clustering.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_input_parsing.py to test_input_parsing.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/tests/test_SVCandidate.py to test_SVCandidate.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_input_parsing.py to SVIM_input_parsing.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_intra.py to SVIM_intra.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_alignment.py to SVIM_alignment.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_plot.py to SVIM_plot.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVCandidate.py to SVCandidate.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_clustering.py to SVIM_clustering.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_CLUSTER.py to SVIM_CLUSTER.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/__init__.py to __init__.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_inter.py to SVIM_inter.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVSignature.py to SVSignature.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_COLLECT.py to SVIM_COLLECT.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_genotyping.py to SVIM_genotyping.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_merging.py to SVIM_merging.cpython-312.pyc +byte-compiling /build/reproducible-path/svim-2.0.0/debian/svim/usr/lib/python3.12/dist-packages/svim/SVIM_COMBINE.py to SVIM_COMBINE.cpython-312.pyc running install_data copying LICENSE -> /build/reproducible-path/svim-2.0.0/debian/svim/usr/. running install_egg_info @@ -1179,12 +1215,14 @@ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/B01_cleanup starting +I: user script /srv/workspace/pbuilder/22185/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env -I: removing directory /srv/workspace/pbuilder/61007 and its subdirectories -I: Current time: Mon Nov 18 05:46:55 -12 2024 -I: pbuilder-time-stamp: 1731952015 +I: removing directory /srv/workspace/pbuilder/22185 and its subdirectories +I: Current time: Mon Dec 22 14:19:11 +14 2025 +I: pbuilder-time-stamp: 1766362751