I: pbuilder: network access will be disabled during build
I: Current time: Sat Apr 22 17:08:59 -12 2023
I: pbuilder-time-stamp: 1682226539
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [elph_1.0.1-5.dsc]
I: copying [./elph_1.0.1.orig.tar.xz]
I: copying [./elph_1.0.1-5.debian.tar.xz]
I: Extracting source
gpgv: Signature made Tue Jun 30 03:51:42 2020 -12
gpgv: using RSA key 3E99A526F5DCC0CBBF1CEEA600BAE74B343369F1
gpgv: issuer "npatra974@gmail.com"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./elph_1.0.1-5.dsc: no acceptable signature found
dpkg-source: info: extracting elph in elph-1.0.1
dpkg-source: info: unpacking elph_1.0.1.orig.tar.xz
dpkg-source: info: unpacking elph_1.0.1-5.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying toplevelmakefile.patch
dpkg-source: info: applying reproduciblebuild.patch
dpkg-source: info: applying clang.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/2560404/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15'
DISTRIBUTION='bookworm'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='969ecdba59a34ccdb7cb6e65e7a6ce76'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='2560404'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.vMNg6SGJ/pbuilderrc_nyPL --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.vMNg6SGJ/b1 --logfile b1/build.log elph_1.0.1-5.dsc'
SUDO_GID='111'
SUDO_UID='106'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://78.137.99.97:3128'
I: uname -a
Linux ionos11-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux
I: ls -l /bin
total 5632
-rwxr-xr-x 1 root root 1265648 Feb 12 08:05 bash
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2
-rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore
-rwxr-xr-x 1 root root 44016 Sep 20 2022 cat
-rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp
-rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod
-rwxr-xr-x 1 root root 72752 Sep 20 2022 chown
-rwxr-xr-x 1 root root 151152 Sep 20 2022 cp
-rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash
-rwxr-xr-x 1 root root 121904 Sep 20 2022 date
-rwxr-xr-x 1 root root 89240 Sep 20 2022 dd
-rwxr-xr-x 1 root root 102200 Sep 20 2022 df
-rwxr-xr-x 1 root root 151344 Sep 20 2022 dir
-rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg
lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname
-rwxr-xr-x 1 root root 43856 Sep 20 2022 echo
-rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep
-rwxr-xr-x 1 root root 35664 Sep 20 2022 false
-rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep
-rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt
-rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount
-rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep
-rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip
-rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe
-rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip
-rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname
-rwxr-xr-x 1 root root 72824 Sep 20 2022 ln
-rwxr-xr-x 1 root root 53024 Mar 23 00:40 login
-rwxr-xr-x 1 root root 151344 Sep 20 2022 ls
-rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk
-rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir
-rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod
-rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp
-rwxr-xr-x 1 root root 59712 Mar 22 22:02 more
-rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount
-rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint
-rwxr-xr-x 1 root root 142968 Sep 20 2022 mv
lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd
lrwxrwxrwx 1 root root 4 Feb 12 08:05 rbash -> bash
-rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink
-rwxr-xr-x 1 root root 72752 Sep 20 2022 rm
-rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir
-rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts
-rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed
lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash
-rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep
-rwxr-xr-x 1 root root 85008 Sep 20 2022 stty
-rwsr-xr-x 1 root root 72000 Mar 22 22:02 su
-rwxr-xr-x 1 root root 39824 Sep 20 2022 sync
-rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar
-rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile
-rwxr-xr-x 1 root root 109616 Sep 20 2022 touch
-rwxr-xr-x 1 root root 35664 Sep 20 2022 true
-rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server
-rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount
-rwxr-xr-x 1 root root 43888 Sep 20 2022 uname
-rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress
-rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir
-rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl
lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat
-rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp
-rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff
-rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep
-rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep
-rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce
-rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep
-rwxr-xr-x 1 root root 2206 Apr 9 2022 zless
-rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore
-rwxr-xr-x 1 root root 4577 Apr 9 2022 znew
I: user script /srv/workspace/pbuilder/2560404/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), help2man
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19596 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on help2man; however:
Package help2man is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget
0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded.
Need to get 18.9 MB of archives. After unpacking 73.0 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main amd64 liblocale-gettext-perl amd64 1.07-5 [15.4 kB]
Get: 2 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 3 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB]
Get: 4 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB]
Get: 5 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB]
Get: 6 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB]
Get: 7 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB]
Get: 8 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB]
Get: 9 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB]
Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB]
Get: 11 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB]
Get: 12 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB]
Get: 13 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB]
Get: 14 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 15 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 16 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB]
Get: 17 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 18 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB]
Get: 19 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 20 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 21 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B]
Get: 22 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 23 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 24 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB]
Get: 25 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB]
Get: 26 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB]
Get: 27 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB]
Get: 28 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB]
Get: 29 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 30 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 31 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB]
Get: 32 http://deb.debian.org/debian bookworm/main amd64 help2man amd64 1.49.3 [198 kB]
Fetched 18.9 MB in 0s (41.9 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package liblocale-gettext-perl.
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(Reading database ... 19596 files and directories currently installed.)
Preparing to unpack .../00-liblocale-gettext-perl_1.07-5_amd64.deb ...
Unpacking liblocale-gettext-perl (1.07-5) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ...
Unpacking sensible-utils (0.0.17+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_amd64.deb ...
Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:amd64.
Preparing to unpack .../03-libmagic1_1%3a5.44-3_amd64.deb ...
Unpacking libmagic1:amd64 (1:5.44-3) ...
Selecting previously unselected package file.
Preparing to unpack .../04-file_1%3a5.44-3_amd64.deb ...
Unpacking file (1:5.44-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../05-gettext-base_0.21-12_amd64.deb ...
Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:amd64.
Preparing to unpack .../06-libuchardet0_0.0.7-1_amd64.deb ...
Unpacking libuchardet0:amd64 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../07-groff-base_1.22.4-10_amd64.deb ...
Unpacking groff-base (1.22.4-10) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_amd64.deb ...
Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:amd64.
Preparing to unpack .../09-libpipeline1_1.5.7-1_amd64.deb ...
Unpacking libpipeline1:amd64 (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../10-man-db_2.11.2-2_amd64.deb ...
Unpacking man-db (2.11.2-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../11-m4_1.4.19-3_amd64.deb ...
Unpacking m4 (1.4.19-3) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../12-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../15-autopoint_0.21-12_all.deb ...
Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ...
Unpacking libdebhelper-perl (13.11.4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../17-libtool_2.4.7-5_all.deb ...
Unpacking libtool (2.4.7-5) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../18-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:amd64.
Preparing to unpack .../23-libelf1_0.188-2.1_amd64.deb ...
Unpacking libelf1:amd64 (0.188-2.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../24-dwz_0.15-1_amd64.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:amd64.
Preparing to unpack .../25-libicu72_72.1-3_amd64.deb ...
Unpacking libicu72:amd64 (72.1-3) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.1+b3_amd64.deb ...
Unpacking libxml2:amd64 (2.9.14+dfsg-1.1+b3) ...
Selecting previously unselected package gettext.
Preparing to unpack .../27-gettext_0.21-12_amd64.deb ...
Unpacking gettext (0.21-12) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../30-debhelper_13.11.4_all.deb ...
Unpacking debhelper (13.11.4) ...
Selecting previously unselected package help2man.
Preparing to unpack .../31-help2man_1.49.3_amd64.deb ...
Unpacking help2man (1.49.3) ...
Setting up libpipeline1:amd64 (1.5.7-1) ...
Setting up libicu72:amd64 (72.1-3) ...
Setting up bsdextrautils (2.38.1-5+b1) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up libmagic1:amd64 (1:5.44-3) ...
Setting up gettext-base (0.21-12) ...
Setting up m4 (1.4.19-3) ...
Setting up file (1:5.44-3) ...
Setting up autotools-dev (20220109.1) ...
Setting up autopoint (0.21-12) ...
Setting up autoconf (2.71-3) ...
Setting up sensible-utils (0.0.17+nmu1) ...
Setting up libuchardet0:amd64 (0.0.7-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libelf1:amd64 (0.188-2.1) ...
Setting up libxml2:amd64 (2.9.14+dfsg-1.1+b3) ...
Setting up liblocale-gettext-perl (1.07-5) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gettext (0.21-12) ...
Setting up libtool (2.4.7-5) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up help2man (1.49.3) ...
Setting up dh-autoreconf (20) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-10) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.11.2-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up debhelper (13.11.4) ...
Processing triggers for libc-bin (2.36-9) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/elph-1.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../elph_1.0.1-5_source.changes
dpkg-buildpackage: info: source package elph
dpkg-buildpackage: info: source version 1.0.1-5
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Nilesh Patra <npatra974@gmail.com>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean --sourcedirectory=sources
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/elph-1.0.1'
dh_auto_clean
cd sources && make -j15 clean
make[2]: Entering directory '/build/elph-1.0.1/sources'
make[2]: Leaving directory '/build/elph-1.0.1/sources'
rm -f debian/elph.1
make[1]: Leaving directory '/build/elph-1.0.1'
dh_autoreconf_clean -O--sourcedirectory=sources
dh_clean -O--sourcedirectory=sources
rm -f debian/debhelper-build-stamp
rm -rf debian/.debhelper/
rm -f -- debian/elph.substvars debian/files
rm -fr -- debian/elph/ debian/tmp/
find . \( \( \
\( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \
\( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
-o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
-o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
-o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
\) -exec rm -f {} + \) -o \
\( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \)
debian/rules binary
dh binary --sourcedirectory=sources
dh_update_autotools_config -O--sourcedirectory=sources
dh_autoreconf -O--sourcedirectory=sources
dh_auto_configure -O--sourcedirectory=sources
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/elph-1.0.1'
dpkg-architecture -f -aamd64 -c dh_auto_build -- LINKER='$(CXX)'
cd sources && make -j15 "INSTALL=install --strip-program=true" LINKER=\$\(CXX\)
make[2]: Entering directory '/build/elph-1.0.1/sources'
g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c elph.cc -o elph.o
g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c motif.cc -o motif.o
g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GBase.cpp -o GBase.o
g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GString.cpp -o GString.o
In file included from elph.cc:5:
GString.h:128:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
128 | GString& trim(char* c=" \t\n\r");
| ^~~~~~~~~
GString.h:129:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
129 | GString& trimR(char* c=" \t\n\r"); //trim only right end
| ^~~~~~~~~
GString.h:131:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
131 | GString& trimL(char* c=" \t\n\r"); //trim only left end
| ^~~~~~~~~
GString.h:136:51: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096);
| ^~~~
elph.cc: In function 'int main(int, char**)':
elph.cc:81:26: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
81 | GArgs args(argc, argv, "ho:abreglvdzxt:p:s:m:n:LEN=ITERNO=MAXLOOP=SGFNO=");
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -Wall -I. -fno-exceptions -fno-rtti -D_REENTRANT -g -g -O2 -ffile-prefix-map=/build/elph-1.0.1/sources=. -fstack-protector-strong -Wformat -Werror=format-security -c GArgs.cpp -o GArgs.o
motif.cc: In member function 'double Motif::findMotif(int, int, int, int, int)':
motif.cc:2876:14: warning: variable 'prevProb' set but not used [-Wunused-but-set-variable]
2876 | double prevProb=0;
| ^~~~~~~~
motif.cc:2878:14: warning: variable 'locMaxInfo' set but not used [-Wunused-but-set-variable]
2878 | double locMaxInfo=0;
| ^~~~~~~~~~
GBase.cpp: In function 'int strhash(const char*)':
GBase.cpp:211:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
211 | register int h=0;
| ^
GBase.cpp:212:16: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
212 | register int g;
| ^
elph.cc:134:30: warning: 'info' may be used uninitialized [-Wmaybe-uninitialized]
134 | globAlignProb=M->optimize(globAlignProb,info,closest);
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
elph.cc:127:12: note: 'info' was declared here
127 | double info;
| ^~~~
GBase.cpp: In function 'char* Gsubstr(const char*, char*, char*)':
GBase.cpp:100:13: warning: 'subs' may be used uninitialized [-Wmaybe-uninitialized]
100 | subs[newlen]='\0';
| ^
GBase.cpp:97:8: note: 'subs' was declared here
97 | char* subs;
| ^~~~
In file included from GString.cpp:2:
GString.h:128:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
128 | GString& trim(char* c=" \t\n\r");
| ^~~~~~~~~
GString.h:129:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
129 | GString& trimR(char* c=" \t\n\r"); //trim only right end
| ^~~~~~~~~
GString.h:131:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
131 | GString& trimL(char* c=" \t\n\r"); //trim only left end
| ^~~~~~~~~
GString.h:136:51: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
136 | size_t read(FILE* stream, char* delimiter="\n", size_t bufsize=4096);
| ^~~~
GString.cpp: In member function 'GString& GString::trim(char)':
GString.cpp:367:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
367 | register int istart;
| ^~~~~~
GString.cpp:368:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
368 | register int iend;
| ^~~~
GString.cpp: In member function 'GString& GString::trim(char*)':
GString.cpp:387:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
387 | register int istart;
| ^~~~~~
GString.cpp:388:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
388 | register int iend;
| ^~~~
GString.cpp: In member function 'GString& GString::trimR(char)':
GString.cpp:408:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
408 | register int iend;
| ^~~~
GString.cpp: In member function 'GString& GString::trimR(char*)':
GString.cpp:426:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
426 | register int iend;
| ^~~~
GString.cpp: In member function 'GString& GString::trimL(char)':
GString.cpp:443:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
443 | register int istart;
| ^~~~~~
GString.cpp: In member function 'GString& GString::trimL(char*)':
GString.cpp:460:15: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
460 | register int istart;
| ^~~~~~
GString.cpp: In member function 'bool GString::is_space() const':
GString.cpp:601:31: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
601 | for (register const char *p = chars(); *p; p++)
| ^
GString.cpp: In member function 'GString& GString::upper()':
GString.cpp:892:23: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
892 | for (register char *p = chrs(); *p; p++)
| ^
GString.cpp: In member function 'GString& GString::lower()':
GString.cpp:903:25: warning: ISO C++17 does not allow 'register' storage class specifier [-Wregister]
903 | for (register char *p = chrs(); *p; p++)
| ^
GString.cpp: In member function 'GString& GString::trimR(char)':
GString.cpp:420:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 18446744071562067969 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
420 | ::memcpy(data->chars, chars(), newlen);
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GString.cpp: In member function 'GString& GString::trimR(char*)':
GString.cpp:437:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 18446744071562067969 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
437 | ::memcpy(data->chars, chars(), newlen);
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GString.cpp: In member function 'GString& GString::trimL(char)':
GString.cpp:454:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 18446744071562067971 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
454 | ::memcpy(data->chars, &chars()[istart], newlen);
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
GString.cpp: In member function 'GString& GString::trimL(char*)':
GString.cpp:472:10: warning: 'void* memcpy(void*, const void*, size_t)' specified bound between 18446744071562067971 and 18446744073709551615 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=]
472 | ::memcpy(data->chars, &chars()[istart], newlen);
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
motif.cc: In member function 'double Motif::findMDet(int)':
motif.cc:1222:9: warning: 'maxinfo' may be used uninitialized [-Wmaybe-uninitialized]
1222 | diff=maxinfo-optinfo;
| ~~~~^~~~~~~~~~~~~~~~
motif.cc:1187:12: note: 'maxinfo' was declared here
1187 | double maxinfo;
| ^~~~~~~
motif.cc: In constructor 'Motif::Motif(const char*, FILE*, seqType, const char*, const char*, int, int, int, int, int)':
motif.cc:1045:29: warning: 'info' may be used uninitialized [-Wmaybe-uninitialized]
1045 | globAlignProb=optimize(globAlignProb,info,0);
| ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
motif.cc:1042:14: note: 'info' was declared here
1042 | double info;
| ^~~~
g++ -o elph elph.o motif.o GBase.o GString.o GArgs.o
make[2]: Leaving directory '/build/elph-1.0.1/sources'
help2man -h "-h" -n ELPH --version-string=1.0.1 --no-discard-stderr sources/elph > debian/elph.1
make[1]: Leaving directory '/build/elph-1.0.1'
dh_auto_test -O--sourcedirectory=sources
rm -fr -- /tmp/dh-xdg-rundir-AjQQS1Jl
create-stamp debian/debhelper-build-stamp
dh_testroot -O--sourcedirectory=sources
dh_prep -O--sourcedirectory=sources
rm -f -- debian/elph.substvars
rm -fr -- debian/.debhelper/generated/elph/ debian/elph/ debian/tmp/
dh_auto_install --destdir=debian/elph/ -O--sourcedirectory=sources
install -m0755 -d /build/elph-1.0.1/debian/elph
dh_install -O--sourcedirectory=sources
install -m0755 -d debian/elph/usr/bin
cp --reflink=auto -a ./sources/elph debian/elph/usr/bin/
dh_installdocs -O--sourcedirectory=sources
install -m0755 -d debian/elph/usr/share/doc/elph
install -m0755 -d debian/elph/usr/share/doc/elph
cp --reflink=auto -a ./debian/README.Debian debian/elph/usr/share/doc/elph
cp --reflink=auto -a ./debian/README.source debian/elph/usr/share/doc/elph
cp --reflink=auto -a ./README debian/elph/usr/share/doc/elph
cp --reflink=auto -a ./Readme.ELPH debian/elph/usr/share/doc/elph
chmod -R u\+rw,go=rX debian/elph/usr/share/doc
install -p -m0644 debian/README.Debian debian/elph/usr/share/doc/elph/README.Debian
install -p -m0644 debian/copyright debian/elph/usr/share/doc/elph/copyright
dh_installchangelogs -O--sourcedirectory=sources
install -m0755 -d debian/elph/usr/share/doc/elph
install -p -m0644 debian/.debhelper/generated/elph/dh_installchangelogs.dch.trimmed debian/elph/usr/share/doc/elph/changelog.Debian
dh_installman -O--sourcedirectory=sources
install -m0755 -d debian/elph/usr/share/man/man1/
install -p -m0644 ./debian/elph.1 debian/elph/usr/share/man/man1/elph.1
man-recode --to-code UTF-8 --suffix .dh-new debian/elph/usr/share/man/man1/elph.1
mv debian/elph/usr/share/man/man1/elph.1.dh-new debian/elph/usr/share/man/man1/elph.1
chmod 0644 -- debian/elph/usr/share/man/man1/elph.1
dh_installsystemduser -O--sourcedirectory=sources
dh_perl -O--sourcedirectory=sources
dh_link -O--sourcedirectory=sources
dh_strip_nondeterminism -O--sourcedirectory=sources
dh_compress -O--sourcedirectory=sources
cd debian/elph
chmod a-x usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1
gzip -9nf usr/share/doc/elph/Readme.ELPH usr/share/doc/elph/changelog.Debian usr/share/man/man1/elph.1
cd '/build/elph-1.0.1'
dh_fixperms -O--sourcedirectory=sources
find debian/elph ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
find debian/elph/usr/share/doc -type f -a -true -a ! -regex 'debian/elph/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644
find debian/elph/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755
find debian/elph/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/elph -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644
find debian/elph/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x
dh_missing -O--sourcedirectory=sources
dh_dwz -a -O--sourcedirectory=sources
dwz -- debian/elph/usr/bin/elph
dh_strip -a -O--sourcedirectory=sources
install -m0755 -d debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/d6
objcopy --only-keep-debug --compress-debug-sections debian/elph/usr/bin/elph debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/d6/0833457c1145f3c67d19b51510dcc92f76611a.debug
chmod 0644 -- debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/d6/0833457c1145f3c67d19b51510dcc92f76611a.debug
strip --remove-section=.comment --remove-section=.note debian/elph/usr/bin/elph
objcopy --add-gnu-debuglink debian/.debhelper/elph/dbgsym-root/usr/lib/debug/.build-id/d6/0833457c1145f3c67d19b51510dcc92f76611a.debug debian/elph/usr/bin/elph
install -m0755 -d debian/.debhelper/elph/dbgsym-root/usr/share/doc
ln -s elph debian/.debhelper/elph/dbgsym-root/usr/share/doc/elph-dbgsym
install -m0755 -d debian/.debhelper/elph
dh_makeshlibs -a -O--sourcedirectory=sources
rm -f debian/elph/DEBIAN/shlibs
dh_shlibdeps -a -O--sourcedirectory=sources
install -m0755 -d debian/elph/DEBIAN
dpkg-shlibdeps -Tdebian/elph.substvars debian/elph/usr/bin/elph
dh_installdeb -O--sourcedirectory=sources
install -m0755 -d debian/elph/DEBIAN
dh_gencontrol -O--sourcedirectory=sources
install -m0755 -d debian/elph/DEBIAN
echo misc:Depends= >> debian/elph.substvars
echo misc:Pre-Depends= >> debian/elph.substvars
install -m0755 -d debian/.debhelper/elph/dbgsym-root/DEBIAN
dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -Pdebian/.debhelper/elph/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=elph-dbgsym "-DDepends=elph (= \${binary:Version})" "-DDescription=debug symbols for elph" -DBuild-Ids=d60833457c1145f3c67d19b51510dcc92f76611a -DSection=debug -UMulti-Arch -UReplaces -UBreaks
chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/control
dpkg-gencontrol -pelph -ldebian/changelog -Tdebian/elph.substvars -Pdebian/elph
chmod 0644 -- debian/elph/DEBIAN/control
dh_md5sums -O--sourcedirectory=sources
install -m0755 -d debian/elph/DEBIAN
cd debian/elph >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/elph/DEBIAN/md5sums
install -m0755 -d debian/.debhelper/elph/dbgsym-root/DEBIAN
cd debian/.debhelper/elph/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums
chmod 0644 -- debian/.debhelper/elph/dbgsym-root/DEBIAN/md5sums
dh_builddeb -O--sourcedirectory=sources
dpkg-deb --root-owner-group --build debian/.debhelper/elph/dbgsym-root ..
dpkg-deb --root-owner-group --build debian/elph ..
dpkg-deb: building package 'elph-dbgsym' in '../elph-dbgsym_1.0.1-5_amd64.deb'.
dpkg-deb: building package 'elph' in '../elph_1.0.1-5_amd64.deb'.
dpkg-genbuildinfo --build=binary -O../elph_1.0.1-5_amd64.buildinfo
dpkg-genchanges --build=binary -O../elph_1.0.1-5_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/2560404 and its subdirectories
I: Current time: Sat Apr 22 17:09:55 -12 2023
I: pbuilder-time-stamp: 1682226595