I: pbuilder: network access will be disabled during build
I: Current time: Fri Apr 21 13:02:42 -12 2023
I: pbuilder-time-stamp: 1682125362
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [hdmf_3.5.1-1.dsc]
I: copying [./hdmf_3.5.1.orig.tar.gz]
I: copying [./hdmf_3.5.1-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sun Feb  5 08:44:17 2023 -12
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./hdmf_3.5.1-1.dsc: no acceptable signature found
dpkg-source: info: extracting hdmf in hdmf-3.5.1
dpkg-source: info: unpacking hdmf_3.5.1.orig.tar.gz
dpkg-source: info: unpacking hdmf_3.5.1-1.debian.tar.xz
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/732994/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='amd64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15'
  DISTRIBUTION='bookworm'
  HOME='/root'
  HOST_ARCH='amd64'
  IFS=' 	
  '
  INVOCATION_ID='76e4237bbc73445db773844e07be239e'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='732994'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YsVMm229/pbuilderrc_P8oy --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YsVMm229/b1 --logfile b1/build.log hdmf_3.5.1-1.dsc'
  SUDO_GID='111'
  SUDO_UID='106'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://78.137.99.97:3128'
I: uname -a
  Linux ionos11-amd64 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux
I: ls -l /bin
  total 5632
  -rwxr-xr-x 1 root root 1265648 Feb 12 08:05 bash
  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bunzip2
  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzcat
  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzcmp -> bzdiff
  -rwxr-xr-x 1 root root    2225 Sep 18  2022 bzdiff
  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzegrep -> bzgrep
  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzfgrep -> bzgrep
  -rwxr-xr-x 1 root root    3775 Sep 18  2022 bzgrep
  -rwxr-xr-x 3 root root   39224 Sep 18  2022 bzip2
  -rwxr-xr-x 1 root root   14568 Sep 18  2022 bzip2recover
  lrwxrwxrwx 1 root root       6 Sep 18  2022 bzless -> bzmore
  -rwxr-xr-x 1 root root    1297 Sep 18  2022 bzmore
  -rwxr-xr-x 1 root root   44016 Sep 20  2022 cat
  -rwxr-xr-x 1 root root   68656 Sep 20  2022 chgrp
  -rwxr-xr-x 1 root root   64496 Sep 20  2022 chmod
  -rwxr-xr-x 1 root root   72752 Sep 20  2022 chown
  -rwxr-xr-x 1 root root  151152 Sep 20  2022 cp
  -rwxr-xr-x 1 root root  125640 Jan  5 01:20 dash
  -rwxr-xr-x 1 root root  121904 Sep 20  2022 date
  -rwxr-xr-x 1 root root   89240 Sep 20  2022 dd
  -rwxr-xr-x 1 root root  102200 Sep 20  2022 df
  -rwxr-xr-x 1 root root  151344 Sep 20  2022 dir
  -rwxr-xr-x 1 root root   88656 Mar 22 22:02 dmesg
  lrwxrwxrwx 1 root root       8 Dec 19 01:33 dnsdomainname -> hostname
  lrwxrwxrwx 1 root root       8 Dec 19 01:33 domainname -> hostname
  -rwxr-xr-x 1 root root   43856 Sep 20  2022 echo
  -rwxr-xr-x 1 root root      41 Jan 24 02:43 egrep
  -rwxr-xr-x 1 root root   35664 Sep 20  2022 false
  -rwxr-xr-x 1 root root      41 Jan 24 02:43 fgrep
  -rwxr-xr-x 1 root root   85600 Mar 22 22:02 findmnt
  -rwsr-xr-x 1 root root   35128 Mar 22 20:35 fusermount
  -rwxr-xr-x 1 root root  203152 Jan 24 02:43 grep
  -rwxr-xr-x 2 root root    2346 Apr  9  2022 gunzip
  -rwxr-xr-x 1 root root    6447 Apr  9  2022 gzexe
  -rwxr-xr-x 1 root root   98136 Apr  9  2022 gzip
  -rwxr-xr-x 1 root root   22680 Dec 19 01:33 hostname
  -rwxr-xr-x 1 root root   72824 Sep 20  2022 ln
  -rwxr-xr-x 1 root root   53024 Mar 23 00:40 login
  -rwxr-xr-x 1 root root  151344 Sep 20  2022 ls
  -rwxr-xr-x 1 root root  207168 Mar 22 22:02 lsblk
  -rwxr-xr-x 1 root root   97552 Sep 20  2022 mkdir
  -rwxr-xr-x 1 root root   72912 Sep 20  2022 mknod
  -rwxr-xr-x 1 root root   43952 Sep 20  2022 mktemp
  -rwxr-xr-x 1 root root   59712 Mar 22 22:02 more
  -rwsr-xr-x 1 root root   59704 Mar 22 22:02 mount
  -rwxr-xr-x 1 root root   18744 Mar 22 22:02 mountpoint
  -rwxr-xr-x 1 root root  142968 Sep 20  2022 mv
  lrwxrwxrwx 1 root root       8 Dec 19 01:33 nisdomainname -> hostname
  lrwxrwxrwx 1 root root      14 Apr  2 18:25 pidof -> /sbin/killall5
  -rwxr-xr-x 1 root root   43952 Sep 20  2022 pwd
  lrwxrwxrwx 1 root root       4 Feb 12 08:05 rbash -> bash
  -rwxr-xr-x 1 root root   52112 Sep 20  2022 readlink
  -rwxr-xr-x 1 root root   72752 Sep 20  2022 rm
  -rwxr-xr-x 1 root root   56240 Sep 20  2022 rmdir
  -rwxr-xr-x 1 root root   27560 Nov  2 04:31 run-parts
  -rwxr-xr-x 1 root root  126424 Jan  5 07:55 sed
  lrwxrwxrwx 1 root root       4 Jan  5 01:20 sh -> dash
  -rwxr-xr-x 1 root root   43888 Sep 20  2022 sleep
  -rwxr-xr-x 1 root root   85008 Sep 20  2022 stty
  -rwsr-xr-x 1 root root   72000 Mar 22 22:02 su
  -rwxr-xr-x 1 root root   39824 Sep 20  2022 sync
  -rwxr-xr-x 1 root root  531984 Apr  6 02:25 tar
  -rwxr-xr-x 1 root root   14520 Nov  2 04:31 tempfile
  -rwxr-xr-x 1 root root  109616 Sep 20  2022 touch
  -rwxr-xr-x 1 root root   35664 Sep 20  2022 true
  -rwxr-xr-x 1 root root   14568 Mar 22 20:35 ulockmgr_server
  -rwsr-xr-x 1 root root   35128 Mar 22 22:02 umount
  -rwxr-xr-x 1 root root   43888 Sep 20  2022 uname
  -rwxr-xr-x 2 root root    2346 Apr  9  2022 uncompress
  -rwxr-xr-x 1 root root  151344 Sep 20  2022 vdir
  -rwxr-xr-x 1 root root   72024 Mar 22 22:02 wdctl
  lrwxrwxrwx 1 root root       8 Dec 19 01:33 ypdomainname -> hostname
  -rwxr-xr-x 1 root root    1984 Apr  9  2022 zcat
  -rwxr-xr-x 1 root root    1678 Apr  9  2022 zcmp
  -rwxr-xr-x 1 root root    6460 Apr  9  2022 zdiff
  -rwxr-xr-x 1 root root      29 Apr  9  2022 zegrep
  -rwxr-xr-x 1 root root      29 Apr  9  2022 zfgrep
  -rwxr-xr-x 1 root root    2081 Apr  9  2022 zforce
  -rwxr-xr-x 1 root root    8103 Apr  9  2022 zgrep
  -rwxr-xr-x 1 root root    2206 Apr  9  2022 zless
  -rwxr-xr-x 1 root root    1842 Apr  9  2022 zmore
  -rwxr-xr-x 1 root root    4577 Apr  9  2022 znew
I: user script /srv/workspace/pbuilder/732994/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: dh-python, python3-setuptools, python3-all, debhelper-compat (= 13), python3-certifi, python3-chardet, python3-h5py (>= 2.9~), python3-idna, python3-numpy, python3-scipy, python3-dateutil, python3-requests, python3-ruamel.yaml, python3-six, python3-urllib3, python3-pandas, python3-unittest2
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19596 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on python3-all; however:
  Package python3-all is not installed.
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on python3-certifi; however:
  Package python3-certifi is not installed.
 pbuilder-satisfydepends-dummy depends on python3-chardet; however:
  Package python3-chardet is not installed.
 pbuilder-satisfydepends-dummy depends on python3-h5py (>= 2.9~); however:
  Package python3-h5py is not installed.
 pbuilder-satisfydepends-dummy depends on python3-idna; however:
  Package python3-idna is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-scipy; however:
  Package python3-scipy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-dateutil; however:
  Package python3-dateutil is not installed.
 pbuilder-satisfydepends-dummy depends on python3-requests; however:
  Package python3-requests is not installed.
 pbuilder-satisfydepends-dummy depends on python3-ruamel.yaml; however:
  Package python3-ruamel.yaml is not installed.
 pbuilder-satisfydepends-dummy depends on python3-six; however:
  Package python3-six is not installed.
 pbuilder-satisfydepends-dummy depends on python3-urllib3; however:
  Package python3-urllib3 is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pandas; however:
  Package python3-pandas is not installed.
 pbuilder-satisfydepends-dummy depends on python3-unittest2; however:
  Package python3-unittest2 is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-hl-100{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libpipeline1{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} libxsimd-dev{a} m4{a} man-db{a} media-types{a} openssl{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-beniget{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-gast{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-ply{a} python3-pythran{a} python3-requests{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-tz{a} python3-unittest2{a} python3-urllib3{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-matplotlib python3-numba python3-numexpr python3-odf python3-openpyxl python3-pil python3-tables wget 
0 packages upgraded, 109 newly installed, 0 to remove and 0 not upgraded.
Need to get 92.5 MB of archives. After unpacking 550 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-minimal amd64 3.11.2-6 [813 kB]
Get: 2 http://deb.debian.org/debian bookworm/main amd64 libexpat1 amd64 2.5.0-1 [99.3 kB]
Get: 3 http://deb.debian.org/debian bookworm/main amd64 python3.11-minimal amd64 3.11.2-6 [2064 kB]
Get: 4 http://deb.debian.org/debian bookworm/main amd64 python3-minimal amd64 3.11.2-1+b1 [26.3 kB]
Get: 5 http://deb.debian.org/debian bookworm/main amd64 media-types all 10.0.0 [26.1 kB]
Get: 6 http://deb.debian.org/debian bookworm/main amd64 readline-common all 8.2-1.3 [69.0 kB]
Get: 7 http://deb.debian.org/debian bookworm/main amd64 libreadline8 amd64 8.2-1.3 [166 kB]
Get: 8 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-stdlib amd64 3.11.2-6 [1796 kB]
Get: 9 http://deb.debian.org/debian bookworm/main amd64 python3.11 amd64 3.11.2-6 [572 kB]
Get: 10 http://deb.debian.org/debian bookworm/main amd64 libpython3-stdlib amd64 3.11.2-1+b1 [9312 B]
Get: 11 http://deb.debian.org/debian bookworm/main amd64 python3 amd64 3.11.2-1+b1 [26.3 kB]
Get: 12 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 13 http://deb.debian.org/debian bookworm/main amd64 openssl amd64 3.0.8-1 [1407 kB]
Get: 14 http://deb.debian.org/debian bookworm/main amd64 ca-certificates all 20230311 [153 kB]
Get: 15 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB]
Get: 16 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB]
Get: 17 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB]
Get: 18 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB]
Get: 19 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB]
Get: 20 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB]
Get: 21 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB]
Get: 22 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB]
Get: 23 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB]
Get: 24 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB]
Get: 25 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB]
Get: 26 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 27 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 28 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB]
Get: 29 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 30 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB]
Get: 31 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 32 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 33 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B]
Get: 34 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 35 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 36 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB]
Get: 37 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB]
Get: 38 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB]
Get: 39 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.1+b3 [687 kB]
Get: 40 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB]
Get: 41 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 42 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 43 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB]
Get: 44 http://deb.debian.org/debian bookworm/main amd64 python3-lib2to3 all 3.11.2-2 [76.2 kB]
Get: 45 http://deb.debian.org/debian bookworm/main amd64 python3-distutils all 3.11.2-2 [131 kB]
Get: 46 http://deb.debian.org/debian bookworm/main amd64 dh-python all 5.20230130 [104 kB]
Get: 47 http://deb.debian.org/debian bookworm/main amd64 libaec0 amd64 1.0.6-1+b1 [21.1 kB]
Get: 48 http://deb.debian.org/debian bookworm/main amd64 libblas3 amd64 3.11.0-2 [149 kB]
Get: 49 http://deb.debian.org/debian bookworm/main amd64 libboost1.74-dev amd64 1.74.0+ds1-20 [9510 kB]
Get: 50 http://deb.debian.org/debian bookworm/main amd64 libboost-dev amd64 1.74.0.3 [4548 B]
Get: 51 http://deb.debian.org/debian bookworm/main amd64 libbrotli1 amd64 1.0.9-2+b6 [275 kB]
Get: 52 http://deb.debian.org/debian bookworm/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg-10 [20.3 kB]
Get: 53 http://deb.debian.org/debian bookworm/main amd64 libsasl2-2 amd64 2.1.28+dfsg-10 [59.7 kB]
Get: 54 http://deb.debian.org/debian bookworm/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5 [183 kB]
Get: 55 http://deb.debian.org/debian bookworm/main amd64 libnghttp2-14 amd64 1.52.0-1 [72.3 kB]
Get: 56 http://deb.debian.org/debian bookworm/main amd64 libpsl5 amd64 0.21.2-1 [58.7 kB]
Get: 57 http://deb.debian.org/debian bookworm/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB]
Get: 58 http://deb.debian.org/debian bookworm/main amd64 libssh2-1 amd64 1.10.0-3+b1 [179 kB]
Get: 59 http://deb.debian.org/debian bookworm/main amd64 libcurl4 amd64 7.88.1-8 [386 kB]
Get: 60 http://deb.debian.org/debian bookworm/main amd64 libexpat1-dev amd64 2.5.0-1 [150 kB]
Get: 61 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB]
Get: 62 http://deb.debian.org/debian bookworm/main amd64 libsz2 amd64 1.0.6-1+b1 [7804 B]
Get: 63 http://deb.debian.org/debian bookworm/main amd64 libhdf5-103-1 amd64 1.10.8+repack1-1 [1237 kB]
Get: 64 http://deb.debian.org/debian bookworm/main amd64 libhdf5-hl-100 amd64 1.10.8+repack1-1 [67.8 kB]
Get: 65 http://deb.debian.org/debian bookworm/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 66 http://deb.debian.org/debian bookworm/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 67 http://deb.debian.org/debian bookworm/main amd64 libjs-sphinxdoc all 5.3.0-4 [130 kB]
Get: 68 http://deb.debian.org/debian bookworm/main amd64 libopenblas0-pthread amd64 0.3.21+ds-4 [6709 kB]
Get: 69 http://deb.debian.org/debian bookworm/main amd64 liblapack3 amd64 3.11.0-2 [2323 kB]
Get: 70 http://deb.debian.org/debian bookworm/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1 [28.9 kB]
Get: 71 http://deb.debian.org/debian bookworm/main amd64 liblzf1 amd64 3.6-3 [10.2 kB]
Get: 72 http://deb.debian.org/debian bookworm/main amd64 libopenblas0 amd64 0.3.21+ds-4 [32.6 kB]
Get: 73 http://deb.debian.org/debian bookworm/main amd64 libopenblas-pthread-dev amd64 0.3.21+ds-4 [4971 kB]
Get: 74 http://deb.debian.org/debian bookworm/main amd64 libopenblas-dev amd64 0.3.21+ds-4 [44.9 kB]
Get: 75 http://deb.debian.org/debian bookworm/main amd64 libpython3.11 amd64 3.11.2-6 [1988 kB]
Get: 76 http://deb.debian.org/debian bookworm/main amd64 zlib1g-dev amd64 1:1.2.13.dfsg-1 [916 kB]
Get: 77 http://deb.debian.org/debian bookworm/main amd64 libpython3.11-dev amd64 3.11.2-6 [4738 kB]
Get: 78 http://deb.debian.org/debian bookworm/main amd64 libpython3-dev amd64 3.11.2-1+b1 [9572 B]
Get: 79 http://deb.debian.org/debian bookworm/main amd64 libpython3-all-dev amd64 3.11.2-1+b1 [1068 B]
Get: 80 http://deb.debian.org/debian bookworm/main amd64 libxsimd-dev amd64 8.1.0-7 [88.8 kB]
Get: 81 http://deb.debian.org/debian bookworm/main amd64 python3-all amd64 3.11.2-1+b1 [1056 B]
Get: 82 http://deb.debian.org/debian bookworm/main amd64 python3.11-dev amd64 3.11.2-6 [615 kB]
Get: 83 http://deb.debian.org/debian bookworm/main amd64 python3-dev amd64 3.11.2-1+b1 [26.2 kB]
Get: 84 http://deb.debian.org/debian bookworm/main amd64 python3-all-dev amd64 3.11.2-1+b1 [1072 B]
Get: 85 http://deb.debian.org/debian bookworm/main amd64 python3-gast all 0.5.2-2 [9364 B]
Get: 86 http://deb.debian.org/debian bookworm/main amd64 python3-beniget all 0.4.1-3 [9920 B]
Get: 87 http://deb.debian.org/debian bookworm/main amd64 python3-certifi all 2022.9.24-1 [153 kB]
Get: 88 http://deb.debian.org/debian bookworm/main amd64 python3-pkg-resources all 66.1.1-1 [296 kB]
Get: 89 http://deb.debian.org/debian bookworm/main amd64 python3-chardet all 5.1.0+dfsg-2 [110 kB]
Get: 90 http://deb.debian.org/debian bookworm/main amd64 python3-charset-normalizer all 3.0.1-2 [49.3 kB]
Get: 91 http://deb.debian.org/debian bookworm/main amd64 python3-six all 1.16.0-4 [17.5 kB]
Get: 92 http://deb.debian.org/debian bookworm/main amd64 python3-dateutil all 2.8.2-2 [78.3 kB]
Get: 93 http://deb.debian.org/debian bookworm/main amd64 python3-decorator all 5.1.1-3 [14.9 kB]
Get: 94 http://deb.debian.org/debian bookworm/main amd64 python3-numpy amd64 1:1.24.2-1 [5209 kB]
Get: 95 http://deb.debian.org/debian bookworm/main amd64 python3-h5py-serial amd64 3.7.0-8 [804 kB]
Get: 96 http://deb.debian.org/debian bookworm/main amd64 python3-h5py all 3.7.0-8 [10.3 kB]
Get: 97 http://deb.debian.org/debian bookworm/main amd64 python3-idna all 3.3-1 [39.4 kB]
Get: 98 http://deb.debian.org/debian bookworm/main amd64 python3-tz all 2022.7.1-3 [30.1 kB]
Get: 99 http://deb.debian.org/debian bookworm/main amd64 python3-pandas-lib amd64 1.5.3+dfsg-2 [3499 kB]
Get: 100 http://deb.debian.org/debian bookworm/main amd64 python3-pandas all 1.5.3+dfsg-2 [2885 kB]
Get: 101 http://deb.debian.org/debian bookworm/main amd64 python3-ply all 3.11-5 [65.8 kB]
Get: 102 http://deb.debian.org/debian bookworm/main amd64 python3-pythran amd64 0.11.0+ds-7 [427 kB]
Get: 103 http://deb.debian.org/debian bookworm/main amd64 python3-urllib3 all 1.26.12-1 [117 kB]
Get: 104 http://deb.debian.org/debian bookworm/main amd64 python3-requests all 2.28.1+dfsg-1 [67.9 kB]
Get: 105 http://deb.debian.org/debian bookworm/main amd64 python3-ruamel.yaml.clib amd64 0.2.7-1+b2 [113 kB]
Get: 106 http://deb.debian.org/debian bookworm/main amd64 python3-ruamel.yaml all 0.17.21-1 [103 kB]
Get: 107 http://deb.debian.org/debian bookworm/main amd64 python3-scipy amd64 1.10.1-2 [15.2 MB]
Get: 108 http://deb.debian.org/debian bookworm/main amd64 python3-setuptools all 66.1.1-1 [521 kB]
Get: 109 http://deb.debian.org/debian bookworm/main amd64 python3-unittest2 all 1.1.0-9 [75.8 kB]
Fetched 92.5 MB in 1s (62.9 MB/s)
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Setting up libxsimd-dev:amd64 (8.1.0-7) ...
Setting up autotools-dev (20220109.1) ...
Setting up libblas3:amd64 (3.11.0-2) ...
update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode
Setting up libexpat1-dev:amd64 (2.5.0-1) ...
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update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode
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update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode
update-alternatives: using /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/x86_64-linux-gnu/libopenblas.so (libopenblas.so-x86_64-linux-gnu) in auto mode
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done.
Reading package lists...
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 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/hdmf-3.5.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../hdmf_3.5.1-1_source.changes
dpkg-buildpackage: info: source package hdmf
dpkg-buildpackage: info: source version 3.5.1-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
dpkg-source: info: using options from hdmf-3.5.1/debian/source/options: --extend-diff-ignore=^src/[^/]+\.egg-info/
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
I: pybuild base:240: python3.11 setup.py clean 
found these packages: ['hdmf', 'hdmf.validate', 'hdmf.testing', 'hdmf.spec', 'hdmf.common', 'hdmf.build', 'hdmf.backends', 'hdmf.common.io', 'hdmf.backends.hdf5']
['h5py>=2.10,<4', 'jsonschema>=2.6.0,<5', 'numpy>=1.16,<1.24', 'pandas>=1.0.5,<2', 'ruamel.yaml>=0.16,<1', 'scipy>=1.1,<2', 'setuptools']
running clean
removing '/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build' (and everything under it)
'build/bdist.linux-x86_64' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:240: python3.11 setup.py config 
found these packages: ['hdmf', 'hdmf.validate', 'hdmf.testing', 'hdmf.spec', 'hdmf.common', 'hdmf.build', 'hdmf.backends', 'hdmf.common.io', 'hdmf.backends.hdf5']
['h5py>=2.10,<4', 'jsonschema>=2.6.0,<5', 'numpy>=1.16,<1.24', 'pandas>=1.0.5,<2', 'ruamel.yaml>=0.16,<1', 'scipy>=1.1,<2', 'setuptools']
running config
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py build 
found these packages: ['hdmf', 'hdmf.validate', 'hdmf.testing', 'hdmf.spec', 'hdmf.common', 'hdmf.build', 'hdmf.backends', 'hdmf.common.io', 'hdmf.backends.hdf5']
['h5py>=2.10,<4', 'jsonschema>=2.6.0,<5', 'numpy>=1.16,<1.24', 'pandas>=1.0.5,<2', 'ruamel.yaml>=0.16,<1', 'scipy>=1.1,<2', 'setuptools']
running build
running build_py
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/utils.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/region.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/query.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/monitor.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/data_utils.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/container.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/array.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/_version.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/_due.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
copying src/hdmf/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate
copying src/hdmf/validate/validator.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate
copying src/hdmf/validate/errors.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate
copying src/hdmf/validate/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing
copying src/hdmf/testing/validate_spec.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing
copying src/hdmf/testing/utils.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing
copying src/hdmf/testing/testcase.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing
copying src/hdmf/testing/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
copying src/hdmf/spec/write.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
copying src/hdmf/spec/spec.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
copying src/hdmf/spec/namespace.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
copying src/hdmf/spec/catalog.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
copying src/hdmf/spec/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/table.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/sparse.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/resources.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/multi.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/hierarchicaltable.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/alignedtable.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
copying src/hdmf/common/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/warnings.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/objectmapper.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/map.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/manager.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/errors.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/classgenerator.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/builders.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
copying src/hdmf/build/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
copying src/hdmf/backends/warnings.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
copying src/hdmf/backends/utils.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
copying src/hdmf/backends/io.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
copying src/hdmf/backends/errors.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
copying src/hdmf/backends/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
copying src/hdmf/common/io/table.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
copying src/hdmf/common/io/resources.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
copying src/hdmf/common/io/multi.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
copying src/hdmf/common/io/alignedtable.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
copying src/hdmf/common/io/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5
copying src/hdmf/backends/hdf5/h5tools.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5
copying src/hdmf/backends/hdf5/h5_utils.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5
copying src/hdmf/backends/hdf5/__init__.py -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema
creating /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/table.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/sparse.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/resources.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/namespace.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/experimental.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
copying src/hdmf/common/hdmf-common-schema/common/base.yaml -> /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common
UPDATING /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_version.py
set /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_version.py to '3.5.1'
   dh_auto_test -O--buildsystem=pybuild
I: pybuild base:240: cd /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build; python3.11 -m unittest discover -v 
test_append_1_0_5 (tests.unit.back_compat_tests.test_1_1_0.Test1_1_0.test_append_1_0_5)
Test whether we can append to files made by hdmf version 1.0.5 ... ok
test_read_1_0_5 (tests.unit.back_compat_tests.test_1_1_0.Test1_1_0.test_read_1_0_5)
Test whether we can read files made by hdmf version 1.0.5 ... ok
test_build_added_attr (tests.unit.build_tests.mapper_tests.test_build.TestBuildDatasetAddedAttrs.test_build_added_attr)
Test build of BarHolder which can contain multiple extended BarData objects, which have a new attribute. ... ok
test_build_correct_dtype (tests.unit.build_tests.mapper_tests.test_build.TestBuildDatasetNotRefinedDtype.test_build_correct_dtype)
Test build of BarDataHolder which contains a BarData. ... ok
test_build_incorrect_dtype (tests.unit.build_tests.mapper_tests.test_build.TestBuildDatasetNotRefinedDtype.test_build_incorrect_dtype)
Test build of BarDataHolder which contains a BarData ... ok
test_build_refined_dtype_convert (tests.unit.build_tests.mapper_tests.test_build.TestBuildDatasetRefinedDtype.test_build_refined_dtype_convert)
Test build of BarDataHolder which contains a BarData with data that needs to be converted to the refined dtype. ... ok
test_build_added_attr (tests.unit.build_tests.mapper_tests.test_build.TestBuildGroupAddedAttr.test_build_added_attr)
Test build of BarHolder which can contain multiple extended Bar objects, which have a new attribute. ... ok
test_build_refined_attr (tests.unit.build_tests.mapper_tests.test_build.TestBuildGroupRefinedAttr.test_build_refined_attr)
Test build of BarHolder which can contain multiple extended Bar objects, which have a modified attr2. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildMultiTypeInc.test_build_two)
Test building a container which contains multiple containers of different types as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeDef.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeDef.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeDef.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeDef.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeInc.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeInc.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeInc.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeInc.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeIncUntypedGroup.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeIncUntypedGroup.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeIncUntypedGroup.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneOrManyTypeIncUntypedGroup.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeDef.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeDef.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeDef.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeDef.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeInc.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeInc.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeInc.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeInc.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeIncUntypedGroup.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeIncUntypedGroup.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeIncUntypedGroup.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneTypeIncUntypedGroup.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_data (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneUntyped.test_build_data)
Test building a container which contains an untyped empty subgroup and an untyped non-empty dataset. ... ok
test_build_empty_data (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildOneUntyped.test_build_empty_data)
Test building a container which contains an untyped empty subgroup and an untyped empty dataset. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeDef.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeDef.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeDef.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeDef.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeInc.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeInc.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeInc.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeInc.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeIncUntypedGroup.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeIncUntypedGroup.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeIncUntypedGroup.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildTwoTypeIncUntypedGroup.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeDef.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeDef.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeDef.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeDef.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeInc.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeInc.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeInc.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeInc.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeIncUntypedGroup.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeIncUntypedGroup.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeIncUntypedGroup.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrManyTypeIncUntypedGroup.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeDef.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeDef.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeDef.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeDef.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeInc.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeInc.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeInc.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeInc.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_mismatch (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeIncUntypedGroup.test_build_mismatch)
Test building a container which contains no containers that match the spec as the spec allows. ... ok
test_build_one (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeIncUntypedGroup.test_build_one)
Test building a container which contains one container as the spec allows. ... ok
test_build_two (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeIncUntypedGroup.test_build_two)
Test building a container which contains multiple containers as the spec allows. ... ok
test_build_zero (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneTypeIncUntypedGroup.test_build_zero)
Test building a container which contains no containers as the spec allows. ... ok
test_build_data (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneUntyped.test_build_data)
Test building a container which contains an untyped empty subgroup and an untyped non-empty dataset. ... ok
test_build_empty_data (tests.unit.build_tests.mapper_tests.test_build_quantity.TestBuildZeroOrOneUntyped.test_build_empty_data)
Test building a container which contains an untyped empty subgroup and an untyped empty dataset. ... ok
test_constructor (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_constructor) ... ok
test_constructor_data_builder_dtype (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_constructor_data_builder_dtype) ... ok
test_constructor_data_builder_no_dtype (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_constructor_data_builder_no_dtype) ... ok
test_overwrite_data (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_overwrite_data) ... ok
test_overwrite_dtype (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_overwrite_dtype) ... ok
test_overwrite_parent (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_overwrite_parent) ... ok
test_overwrite_source (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_overwrite_source) ... ok
test_repr (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_repr) ... ok
test_set_data (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_set_data) ... ok
test_set_dtype (tests.unit.build_tests.test_builder.TestDatasetBuilder.test_set_dtype) ... ok
test_constructor (tests.unit.build_tests.test_builder.TestGroupBuilder.test_constructor) ... ok
test_constructor_dset_none (tests.unit.build_tests.test_builder.TestGroupBuilder.test_constructor_dset_none) ... ok
test_overwrite_location (tests.unit.build_tests.test_builder.TestGroupBuilder.test_overwrite_location) ... ok
test_repr (tests.unit.build_tests.test_builder.TestGroupBuilder.test_repr) ... ok
test_set_location (tests.unit.build_tests.test_builder.TestGroupBuilder.test_set_location) ... ok
test_set_source (tests.unit.build_tests.test_builder.TestGroupBuilder.test_set_source)
Test that setting source sets the children builder source. ... ok
test_set_source_no_reset (tests.unit.build_tests.test_builder.TestGroupBuilder.test_set_source_no_reset)
Test that setting source does not set the children builder source if children already have a source. ... ok
test_get_attr (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_attr)
Test get() for attributes ... ok
test_get_dataset (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_dataset)
Test get() for datasets ... ok
test_get_group (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_group)
Test get() for groups ... ok
test_get_group_deeper (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_group_deeper)
Test get() for groups deeper in hierarchy ... ok
test_get_invalid_key (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_invalid_key)
Test get() for invalid key ... ok
test_get_link (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_get_link)
Test get() for links ... ok
test_getitem_attr (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_attr)
Test __getitem__ for attributes ... ok
test_getitem_dataset (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_dataset)
Test __getitem__ for datasets ... ok
test_getitem_group (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_group)
Test __getitem__ for groups ... ok
test_getitem_group_deeper (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_group_deeper)
Test __getitem__ for groups deeper in hierarchy ... ok
test_getitem_invalid_key (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_invalid_key)
Test __getitem__ for invalid key ... ok
test_getitem_invalid_key_deeper (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_invalid_key_deeper)
Test __getitem__ for invalid key ... ok
test_getitem_link (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_getitem_link)
Test __getitem__ for links ... ok
test_items (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_items)
Test items() ... ok
test_keys (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_keys)
Test keys() ... ok
test_path (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_path) ... ok
test_values (tests.unit.build_tests.test_builder.TestGroupBuilderGetters.test_values)
Test values() ... ok
test_is_empty_false_attribute (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_attribute)
Test is_empty() when group has an attribute ... ok
test_is_empty_false_dataset (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_dataset)
Test is_empty() when group has a dataset ... ok
test_is_empty_false_group_attribute (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_group_attribute)
Test is_empty() when group has subgroup with an attribute ... ok
test_is_empty_false_group_dataset (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_group_dataset)
Test is_empty() when group has a subgroup with a dataset ... ok
test_is_empty_false_group_link (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_group_link)
Test is_empty() when group has subgroup with a link ... ok
test_is_empty_false_link (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_false_link)
Test is_empty() when group has a link ... ok
test_is_empty_true (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_true)
Test empty when group has nothing in it ... ok
test_is_empty_true_group_empty (tests.unit.build_tests.test_builder.TestGroupBuilderIsEmpty.test_is_empty_true_group_empty)
Test is_empty() when group has an empty subgroup ... ok
test_set_attribute (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_set_attribute) ... ok
test_set_dataset (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_set_dataset) ... ok
test_set_exists_wrong_type (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_set_exists_wrong_type) ... ok
test_set_group (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_set_group) ... ok
test_set_link (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_set_link) ... ok
test_setitem_disabled (tests.unit.build_tests.test_builder.TestGroupBuilderSetters.test_setitem_disabled)
Test __setitem__ is disabled ... ok
test_constructor (tests.unit.build_tests.test_builder.TestLinkBuilder.test_constructor) ... ok
test_constructor_no_name (tests.unit.build_tests.test_builder.TestLinkBuilder.test_constructor_no_name) ... ok
test_constructor (tests.unit.build_tests.test_builder.TestReferenceBuilder.test_constructor) ... ok
test_constructor (tests.unit.build_tests.test_builder.TestRegionBuilder.test_constructor) ... ok
test_post_process_default_name (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_post_process_default_name)
Test that docval generation for a class with a default name has the default value for name set. ... ok
test_post_process_fixed_name (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_post_process_fixed_name)
Test that docval generation for a class with a fixed name does not contain a docval arg for name. ... ok
test_process_field_spec_link (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_process_field_spec_link)
Test that processing a link spec does not set child=True in __fields__. ... ok
test_process_field_spec_overwrite (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_process_field_spec_overwrite)
Test that docval generation overwrites previous docval args. ... ok
test_update_docval (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval)
Test update_docval_args for a variety of data types and mapping configurations. ... ok
test_update_docval_attr_shape (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_attr_shape)
Test that update_docval_args for an attribute with shape sets the type and shape keys. ... ok
test_update_docval_default_value (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_default_value)
Test that update_docval_args for an optional field with default value sets the default key. ... ok
test_update_docval_default_value_none (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_default_value_none)
Test that update_docval_args for an optional field sets default: None. ... ok
test_update_docval_default_value_none_required_parent (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_default_value_none_required_parent)
Test that update_docval_args for an optional field with a required parent sets default: None. ... ok
test_update_docval_dset_shape (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_dset_shape)
Test that update_docval_args for a dataset with shape sets the type and shape keys. ... ok
test_update_docval_required_field_optional_parent (tests.unit.build_tests.test_classgenerator.TestBaseProcessFieldSpec.test_update_docval_required_field_optional_parent)
Test that update_docval_args for a required field with an optional parent sets default: None. ... ok
test_bad_generator (tests.unit.build_tests.test_classgenerator.TestClassGenerator.test_bad_generator)
Test that register_generator raises an error if the generator is not an instance of CustomClassGenerator. ... ok
test_no_generators (tests.unit.build_tests.test_classgenerator.TestClassGenerator.test_no_generators)
Test that a ClassGenerator without registered generators does nothing. ... ok
test_register_generator (tests.unit.build_tests.test_classgenerator.TestClassGenerator.test_register_generator)
Test TypeMap.register_generator and ClassGenerator.register_generator. ... ok
test_dynamic_container_composition (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_composition) ... ok
test_dynamic_container_composition_missing_type (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_composition_missing_type) ... ok
test_dynamic_container_composition_reverse_order (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_composition_reverse_order) ... ok
test_dynamic_container_constructor (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_constructor) ... ok
test_dynamic_container_constructor_name (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_constructor_name) ... ok
test_dynamic_container_constructor_name_default_name (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_constructor_name_default_name) ... ok
test_dynamic_container_creation (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_creation) ... ok
test_dynamic_container_creation_defaults (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_creation_defaults) ... ok
test_dynamic_container_default_name (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_default_name) ... ok
test_dynamic_container_fixed_name (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_fixed_name)
Test that dynamic class generation for an extended type with a fixed name works. ... ok
test_dynamic_container_super_init_fixed_value (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_dynamic_container_super_init_fixed_value)
Test that dynamic class generation when the superclass init does not include all fields works ... ok
test_multi_container_spec (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_multi_container_spec) ... ok
test_multi_container_spec_optional (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_multi_container_spec_optional) ... ok
test_multi_container_spec_with_inc (tests.unit.build_tests.test_classgenerator.TestDynamicContainer.test_multi_container_spec_with_inc) ... ok
test_get_class_include_from_separate_ns_1 (tests.unit.build_tests.test_classgenerator.TestGetClassSeparateNamespace.test_get_class_include_from_separate_ns_1)
Test that get_class correctly sets the name and includes types correctly across namespaces. ... ok
test_get_class_include_from_separate_ns_2 (tests.unit.build_tests.test_classgenerator.TestGetClassSeparateNamespace.test_get_class_include_from_separate_ns_2)
Test that get_class correctly sets the name and includes types correctly across namespaces. ... ok
test_get_class_include_from_separate_ns_3 (tests.unit.build_tests.test_classgenerator.TestGetClassSeparateNamespace.test_get_class_include_from_separate_ns_3)
Test that get_class correctly sets the name and includes types correctly across namespaces. ... ok
test_get_class_include_from_separate_ns_4 (tests.unit.build_tests.test_classgenerator.TestGetClassSeparateNamespace.test_get_class_include_from_separate_ns_4)
Test that get_class correctly sets the name and includes types correctly across namespaces. ... ok
test_get_class_separate_ns (tests.unit.build_tests.test_classgenerator.TestGetClassSeparateNamespace.test_get_class_separate_ns)
Test that get_class correctly sets the name and type hierarchy across namespaces. ... ok
test_post_process (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_post_process) ... ok
test_post_process_already_multi (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_post_process_already_multi) ... ok
test_post_process_container (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_post_process_container) ... ok
test_update_docval (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_update_docval) ... ok
test_update_init_one_or_more (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_update_init_one_or_more) ... ok
test_update_init_zero_or_more (tests.unit.build_tests.test_classgenerator.TestMCIProcessFieldSpec.test_update_init_zero_or_more) ... ok
test_ascii_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_ascii_spec) ... ok
test_bool_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_bool_spec) ... ok
test_compound_type (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_compound_type)
Test that convert_dtype passes through arguments if spec dtype is a list without any validation. ... ok
test_convert_to_64bit_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_64bit_spec)
Test that if given any value for a spec with a 64-bit dtype, convert_dtype will convert to the spec type. ... ok
test_convert_to_bool_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_bool_spec)
Test conversion of various types to bool. ... ok
test_convert_to_float32_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_float32_spec)
Test conversion of various types to float32. ... ok
test_convert_to_int16_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_int16_spec)
Test conversion of various types to int16. ... ok
test_convert_to_int32_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_int32_spec)
Test conversion of various types to int32. ... ok
test_convert_to_uint16_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_uint16_spec)
Test conversion of various types to uint16. ... ok
test_convert_to_uint32_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_convert_to_uint32_spec)
Test conversion of various types to uint32. ... ok
test_dci_input (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_dci_input) ... ok
test_isodatetime_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_isodatetime_spec) ... ok
test_no_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_no_spec) ... ok
test_numeric_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_numeric_spec) ... ok
test_override_type_int_restrict_precision (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_override_type_int_restrict_precision) ... ok
test_override_type_none_to_bool (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_override_type_none_to_bool) ... ok
test_override_type_numeric_to_uint (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_override_type_numeric_to_uint) ... ok
test_override_type_numeric_to_uint_list (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_override_type_numeric_to_uint_list) ... ok
test_text_spec (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_text_spec) ... ok
test_value_none (tests.unit.build_tests.test_convert_dtype.TestConvertDtype.test_value_none) ... ok
test_build (tests.unit.build_tests.test_io_manager.TestBuildManager.test_build) ... ok
test_build_memoization (tests.unit.build_tests.test_io_manager.TestBuildManager.test_build_memoization) ... ok
test_construct (tests.unit.build_tests.test_io_manager.TestBuildManager.test_construct) ... ok
test_construct_memoization (tests.unit.build_tests.test_io_manager.TestBuildManager.test_construct_memoization) ... ok
test_build (tests.unit.build_tests.test_io_manager.TestNestedContainersNoSubgroups.test_build)
Test default mapping for an Container that has an Container as an attribute value ... ok
test_construct (tests.unit.build_tests.test_io_manager.TestNestedContainersNoSubgroups.test_construct) ... ok
test_build (tests.unit.build_tests.test_io_manager.TestNestedContainersSubgroup.test_build)
Test default mapping for an Container that has an Container as an attribute value ... ok
test_construct (tests.unit.build_tests.test_io_manager.TestNestedContainersSubgroup.test_construct) ... ok
test_build (tests.unit.build_tests.test_io_manager.TestNestedContainersSubgroupSubgroup.test_build)
Test default mapping for an Container that has an Container as an attribute value ... ok
test_construct (tests.unit.build_tests.test_io_manager.TestNestedContainersSubgroupSubgroup.test_construct) ... ok
test_build (tests.unit.build_tests.test_io_manager.TestNoAttribute.test_build)
Test that an error is raised when a spec is mapped to a non-existent container attribute. ... ok
test_get_ns_dt (tests.unit.build_tests.test_io_manager.TestTypeMap.test_get_ns_dt) ... ok
test_get_ns_dt_missing (tests.unit.build_tests.test_io_manager.TestTypeMap.test_get_ns_dt_missing) ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestFixedAttributeValue.test_default_mapping) ... ok
test_required_attr_missing (tests.unit.build_tests.test_io_map.TestFixedAttributeValue.test_required_attr_missing)
Test mapping when one container has a required attribute with a fixed value. ... ok
test_bad_name (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_bad_name)
Test get_subspec on a builder that doesn't map to the spec. ... ok
test_bad_name_no_data_type (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_bad_name_no_data_type)
Test get_subspec on a builder without a data type that doesn't map to the spec. ... ok
test_named_dataset (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_named_dataset)
Test get_subspec on a builder that maps to a named dataset of the given spec. ... ok
test_named_group (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_named_group)
Test get_subspec on a builder that maps to a named subgroup of the given spec. ... ok
test_named_link_data_type_inc (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_named_link_data_type_inc)
Test get_subspec on a builder that maps to an named link. ... ok
test_named_link_hierarchy_data_type_inc (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_named_link_hierarchy_data_type_inc)
Test get_subspec on a builder that maps to an named link. ... ok
test_unnamed_group_data_type_def (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_unnamed_group_data_type_def)
Test get_subspec on a builder that maps to an unnamed subgroup of the given spec using data_type_def. ... ok
test_unnamed_group_data_type_inc (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_unnamed_group_data_type_inc)
Test get_subspec on a builder that maps to an unnamed subgroup of the given spec using data_type_inc. ... ok
test_unnamed_link_data_type_inc (tests.unit.build_tests.test_io_map.TestGetSubSpec.test_unnamed_link_data_type_inc)
Test get_subspec on a builder that maps to an unnamed link. ... ok
test_build_broken_link_no_parent (tests.unit.build_tests.test_io_map.TestLinkedContainer.test_build_broken_link_no_parent)
Test that building a container with a broken link that has no parent raises an error. ... ok
test_build_broken_link_parent (tests.unit.build_tests.test_io_map.TestLinkedContainer.test_build_broken_link_parent)
Test that building a container with a broken link that has a parent raises an error. ... expected failure
test_build_child_link (tests.unit.build_tests.test_io_map.TestLinkedContainer.test_build_child_link)
Test default mapping functionality when one container contains a child link to another container ... ok
test_build_1d (tests.unit.build_tests.test_io_map.TestMapStrings.test_build_1d) ... ok
test_build_dataio (tests.unit.build_tests.test_io_map.TestMapStrings.test_build_dataio) ... ok
test_build_scalar (tests.unit.build_tests.test_io_map.TestMapStrings.test_build_scalar) ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestMissingRequiredAttribute.test_default_mapping) ... ok
test_required_attr_missing (tests.unit.build_tests.test_io_map.TestMissingRequiredAttribute.test_required_attr_missing)
Test mapping when one container is missing a required attribute. ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestMissingRequiredAttributeRef.test_default_mapping) ... ok
test_required_attr_ref_missing (tests.unit.build_tests.test_io_map.TestMissingRequiredAttributeRef.test_required_attr_ref_missing)
Test mapping when one container is missing a required attribute reference. ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestMissingRequiredDataset.test_default_mapping) ... ok
test_required_dataset_missing (tests.unit.build_tests.test_io_map.TestMissingRequiredDataset.test_required_dataset_missing)
Test mapping when one container is missing a required dataset. ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestMissingRequiredGroup.test_default_mapping) ... ok
test_required_group_missing (tests.unit.build_tests.test_io_map.TestMissingRequiredGroup.test_required_group_missing)
Test mapping when one container is missing a required group. ... ok
test_bad_value (tests.unit.build_tests.test_io_map.TestObjectMapperBadValue.test_bad_value)
Test that an error is raised if the container attribute value for a spec with a data type is not a container ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestObjectMapperContainer.test_default_mapping) ... ok
test_default_mapping_keys (tests.unit.build_tests.test_io_map.TestObjectMapperContainer.test_default_mapping_keys) ... ok
test_build (tests.unit.build_tests.test_io_map.TestObjectMapperNested.test_build)
Test default mapping functionality when object attributes map to an  attribute deeper ... ok
test_construct (tests.unit.build_tests.test_io_map.TestObjectMapperNested.test_construct)
Test default mapping functionality when object attributes map to an attribute ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestObjectMapperNested.test_default_mapping) ... ok
test_default_mapping_keys (tests.unit.build_tests.test_io_map.TestObjectMapperNested.test_default_mapping_keys) ... ok
test_remap_keys (tests.unit.build_tests.test_io_map.TestObjectMapperNested.test_remap_keys) ... ok
test_build (tests.unit.build_tests.test_io_map.TestObjectMapperNoNesting.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build_empty (tests.unit.build_tests.test_io_map.TestObjectMapperNoNesting.test_build_empty)
Test default mapping functionality when no attributes are nested ... ok
test_construct (tests.unit.build_tests.test_io_map.TestObjectMapperNoNesting.test_construct) ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestObjectMapperNoNesting.test_default_mapping) ... ok
test_default_mapping_keys (tests.unit.build_tests.test_io_map.TestObjectMapperNoNesting.test_default_mapping_keys) ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestOptionalEmptyGroup.test_default_mapping) ... ok
test_optional_group_empty (tests.unit.build_tests.test_io_map.TestOptionalEmptyGroup.test_optional_group_empty)
Test mapping when one container has an optional empty group. ... ok
test_optional_group_not_empty (tests.unit.build_tests.test_io_map.TestOptionalEmptyGroup.test_optional_group_not_empty)
Test mapping when one container has an optional not empty group. ... ok
test_build_attr_ref (tests.unit.build_tests.test_io_map.TestReference.test_build_attr_ref)
Test default mapping functionality when one container contains an attribute reference to another container. ... ok
test_build_attr_ref_invalid (tests.unit.build_tests.test_io_map.TestReference.test_build_attr_ref_invalid)
Test default mapping functionality when one container contains an attribute reference to another container. ... ok
test_default_mapping (tests.unit.build_tests.test_io_map.TestRequiredEmptyGroup.test_default_mapping) ... ok
test_required_group_empty (tests.unit.build_tests.test_io_map.TestRequiredEmptyGroup.test_required_group_empty)
Test mapping when one container has a required empty group. ... ok
test_get_map (tests.unit.build_tests.test_io_map.TestTypeMap.test_get_map) ... ok
test_get_map_register (tests.unit.build_tests.test_io_map.TestTypeMap.test_get_map_register) ... ok
test_get_map_unique_mappers (tests.unit.build_tests.test_io_map.TestTypeMap.test_get_map_unique_mappers) ... ok
test_build (tests.unit.build_tests.test_io_map_data.TestBuildCompoundDatasetOfReferences.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build (tests.unit.build_tests.test_io_map_data.TestBuildDatasetOfReferencesUnbuiltTarget.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build (tests.unit.build_tests.test_io_map_data.TestBuildTypedDatasetOfReferences.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build (tests.unit.build_tests.test_io_map_data.TestBuildUntypedDatasetOfReferences.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build_datachunkiterator (tests.unit.build_tests.test_io_map_data.TestDataIOEdgeCases.test_build_datachunkiterator)
Test building of a dataset with data_type and no dtype with value DataChunkIterator. ... ok
test_build_dataio (tests.unit.build_tests.test_io_map_data.TestDataIOEdgeCases.test_build_dataio)
Test building of a dataset with data_type and no dtype with value DataIO. ... ok
test_build_dataio_datachunkiterator (tests.unit.build_tests.test_io_map_data.TestDataIOEdgeCases.test_build_dataio_datachunkiterator)
Test building of a dataset with no dtype and no data_type with value DataIO wrapping a DCI. ... ok
test_append (tests.unit.build_tests.test_io_map_data.TestDataMap.test_append) ... ok
test_build (tests.unit.build_tests.test_io_map_data.TestDataMap.test_build)
Test default mapping functionality when no attributes are nested ... ok
test_build_empty_data (tests.unit.build_tests.test_io_map_data.TestDataMap.test_build_empty_data)
Test building of a Data object with empty data. ... ok
test_extend (tests.unit.build_tests.test_io_map_data.TestDataMap.test_extend) ... ok
test_construct_scalar_dataset (tests.unit.build_tests.test_io_map_data.TestDataMapScalar.test_construct_scalar_dataset)
Test constructing a Data object with an h5py.Dataset with shape (1, ) for scalar spec. ... ok
test_construct_scalar_compound_dataset (tests.unit.build_tests.test_io_map_data.TestDataMapScalarCompound.test_construct_scalar_compound_dataset)
Test construct on a compound h5py.Dataset with shape (1, ) for scalar spec does not resolve the data. ... ok
test_add_category (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_category)
Test that we can correct a non-empty category to an existing table ... ok
test_add_category_already_in_table (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_category_already_in_table) ... ok
test_add_category_misaligned_rows (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_category_misaligned_rows)
Test that we can correct a non-empty category to an existing table ... ok
test_add_column (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_column) ... ok
test_add_column_bad_category (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_column_bad_category)
Test add column with bad category ... ok
test_add_column_bad_length (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_column_bad_length)
Test add column that is too short ... ok
test_add_column_to_subcategory (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_column_to_subcategory)
Test adding a column to a subcategory ... ok
test_add_row (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_add_row)
Test adding a row to a non_empty table ... ok
test_dynamictable_region_to_aligneddynamictable (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_dynamictable_region_to_aligneddynamictable)
Test to ensure data is being retrieved correctly when pointing to an AlignedDynamicTable. ... ok
test_get_colnames (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_get_colnames)
Test the AlignedDynamicTable.get_colnames function ... ok
test_get_item (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_get_item)
Test getting elements from the table ... ok
test_init (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init)
Test that just checks that populating the tables with data works correctly ... ok
test_init_categories_without_category_tables_error (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_categories_without_category_tables_error) ... ok
test_init_category_table_names_do_not_match_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_category_table_names_do_not_match_categories) ... ok
test_init_duplicate_category_table_name (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_duplicate_category_table_name) ... ok
test_init_length_mismatch_between_categories_and_category_tables (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_length_mismatch_between_categories_and_category_tables) ... ok
test_init_misaligned_category_tables (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_misaligned_category_tables)
Test misaligned category tables ... ok
test_init_with_bad_custom_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_bad_custom_categories)
Test that we cannot provide a category that is not a DynamicTable ... ok
test_init_with_custom_empty_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_custom_empty_categories)
Test that we can create an empty table with custom categories ... ok
test_init_with_custom_misaligned_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_custom_misaligned_categories)
Test that we cannot create an empty table with custom categories ... ok
test_init_with_custom_nonempty_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_custom_nonempty_categories)
Test that we can create an empty table with custom categories ... ok
test_init_with_custom_nonempty_categories_and_main (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_custom_nonempty_categories_and_main)
Test that we can create a non-empty table with custom non-empty categories ... ok
test_init_with_duplicate_custom_categories (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_init_with_duplicate_custom_categories)
Test that we can create an empty table with custom categories ... ok
test_nested_aligned_dynamic_table_not_allowed (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_nested_aligned_dynamic_table_not_allowed)
Test that using and AlignedDynamicTable as category for an AlignedDynamicTable is not allowed ... ok
test_round_trip_container (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_round_trip_container)
Test read and write the container by itself ... ok
test_to_dataframe (tests.unit.common.test_alignedtable.TestAlignedDynamicTableContainer.test_to_dataframe)
Test that the to_dataframe method works ... ok
test_base_types (tests.unit.common.test_common.TestCommonTypeMap.test_base_types) ... ok
test_write_cache_spec (tests.unit.common.test_common_io.TestCacheSpec.test_write_cache_spec)
Roundtrip test for writing spec and reading it back in. ... ok
test_write_cache_spec_injected (tests.unit.common.test_common_io.TestCacheSpec.test_write_cache_spec_injected)
Roundtrip test for writing spec and reading it back in when HDF5IO is passed an open h5py.File. ... ok
test_write_no_cache_spec (tests.unit.common.test_common_io.TestCacheSpec.test_write_no_cache_spec)
Roundtrip test for not writing spec. ... ok
test_gethdf5io (tests.unit.common.test_common_io.TestGetHdf5IO.test_gethdf5io)
Test the get_hdf5io convenience method with manager=None. ... ok
test_gethdf5io_manager (tests.unit.common.test_common_io.TestGetHdf5IO.test_gethdf5io_manager)
Test the get_hdf5io convenience method with manager set. ... ok
test_dynamic_column (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_column) ... ok
test_dynamic_table (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_table) ... ok
test_dynamic_table_region (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_table_region) ... ok
test_dynamic_table_region_bad_target_col (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_table_region_bad_target_col) ... ok
test_dynamic_table_region_non_dtr_target (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_table_region_non_dtr_target) ... ok
test_dynamic_table_region_optional (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_dynamic_table_region_optional) ... ok
test_forbids_incorrect_col (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_forbids_incorrect_col) ... ok
test_optional_col (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_optional_col) ... ok
test_roundtrip (tests.unit.common.test_generate_table.TestDynamicDynamicTable.test_roundtrip) ... ok
test_drop_id_columns (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_drop_id_columns) ... ok
test_flatten_column_index (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_flatten_column_index) ... ok
test_flatten_column_index_already_flat_index (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_flatten_column_index_already_flat_index) ... ok
test_flatten_column_index_bad_maxlevels (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_flatten_column_index_bad_maxlevels) ... ok
test_to_hierarchical_dataframe (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe) ... ok
test_to_hierarchical_dataframe_empty_tables (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_empty_tables) ... ok
test_to_hierarchical_dataframe_flat_table (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_flat_table) ... ok
test_to_hierarchical_dataframe_indexed_data_list (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_indexed_data_list) ... ok
test_to_hierarchical_dataframe_indexed_data_nparray (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_indexed_data_nparray) ... ok
test_to_hierarchical_dataframe_indexed_dtr_on_last_level (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_indexed_dtr_on_last_level) ... ok
test_to_hierarchical_dataframe_multilevel (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_multilevel) ... ok
test_to_hierarchical_dataframe_no_dtr_on_top_level (tests.unit.common.test_linkedtables.TestHierarchicalTable.test_to_hierarchical_dataframe_no_dtr_on_top_level) ... ok
test_get_foreign_column_in_main_and_category_table (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_foreign_column_in_main_and_category_table) ... ok
test_get_foreign_columns (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_foreign_columns) ... ok
test_get_foreign_columns_none (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_foreign_columns_none)
Test false if there are no DynamicTableRegionColumns ... ok
test_get_linked_tables (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_linked_tables) ... ok
test_get_linked_tables_complex_link (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_linked_tables_complex_link) ... ok
test_get_linked_tables_none (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_linked_tables_none)
Test false if there are no DynamicTableRegionColumns ... ok
test_get_linked_tables_simple_link (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_get_linked_tables_simple_link) ... ok
test_has_foreign_column_in_main_table (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_has_foreign_column_in_main_table) ... ok
test_has_foreign_columns_false (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_has_foreign_columns_false)
Test false if there are no DynamicTableRegionColumns ... ok
test_has_foreign_columns_in_category_tables (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_has_foreign_columns_in_category_tables)
Test confirming working order for DynamicTableRegions in subtables ... ok
test_to_hierarchical_dataframe (tests.unit.common.test_linkedtables.TestLinkedAlignedDynamicTables.test_to_hierarchical_dataframe)
Test that converting an AlignedDynamicTable with links works ... ok
test_get_foreign_columns (tests.unit.common.test_linkedtables.TestLinkedDynamicTables.test_get_foreign_columns)
Test DynamicTable.get_foreign_columns ... ok
test_get_linked_tables (tests.unit.common.test_linkedtables.TestLinkedDynamicTables.test_get_linked_tables)
Test DynamicTable.get_linked_tables ... ok
test_has_foreign_columns (tests.unit.common.test_linkedtables.TestLinkedDynamicTables.test_has_foreign_columns)
Test DynamicTable.get_foreign_columns ... ok
test_populate_table_hierarchy (tests.unit.common.test_linkedtables.TestLinkedDynamicTables.test_populate_table_hierarchy)
Test that just checks that populating the tables with data works correctly ... ok
test_roundtrip (tests.unit.common.test_multi.SimpleMultiContainerRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_multi.SimpleMultiContainerRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_add_ref (tests.unit.common.test_resources.TestExternalResources.test_add_ref) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_attribute (tests.unit.common.test_resources.TestExternalResources.test_add_ref_attribute) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_bad_arg (tests.unit.common.test_resources.TestExternalResources.test_add_ref_bad_arg) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_column_as_attribute (tests.unit.common.test_resources.TestExternalResources.test_add_ref_column_as_attribute) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_compound_data (tests.unit.common.test_resources.TestExternalResources.test_add_ref_compound_data) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_duplicate_resource (tests.unit.common.test_resources.TestExternalResources.test_add_ref_duplicate_resource) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_same_key_diff_objfield (tests.unit.common.test_resources.TestExternalResources.test_add_ref_same_key_diff_objfield) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_same_keyname (tests.unit.common.test_resources.TestExternalResources.test_add_ref_same_keyname) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_two_keys (tests.unit.common.test_resources.TestExternalResources.test_add_ref_two_keys) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_two_resources (tests.unit.common.test_resources.TestExternalResources.test_add_ref_two_resources) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_check_object_field_add (tests.unit.common.test_resources.TestExternalResources.test_check_object_field_add) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_check_object_field_multi_error (tests.unit.common.test_resources.TestExternalResources.test_check_object_field_multi_error) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_check_object_field_not_in_obj_table (tests.unit.common.test_resources.TestExternalResources.test_check_object_field_not_in_obj_table) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_keys (tests.unit.common.test_resources.TestExternalResources.test_get_keys) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_keys_subset (tests.unit.common.test_resources.TestExternalResources.test_get_keys_subset) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_object_resources (tests.unit.common.test_resources.TestExternalResources.test_get_object_resources) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_resources (tests.unit.common.test_resources.TestExternalResources.test_get_resources) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_invalid_entity_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_invalid_entity_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_invalid_keys_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_invalid_keys_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_invalid_object_keys_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_invalid_object_keys_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_invalid_objects_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_invalid_objects_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_invalid_resources_assert_external_resources_equal (tests.unit.common.test_resources.TestExternalResources.test_invalid_resources_assert_external_resources_equal) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py:629: FutureWarning: ExternalResources.__init__: Using positional arguments for this method is discouraged and will be deprecated in a future major release. Please use keyword arguments to ensure future compatibility.
  warnings.warn(msg, FutureWarning)
ok
test_object_key_unqiueness (tests.unit.common.test_resources.TestExternalResources.test_object_key_unqiueness) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_piecewise_add (tests.unit.common.test_resources.TestExternalResources.test_piecewise_add) ... skipped 'Outdated do to privatization'
test_roundtrip (tests.unit.common.test_resources.TestExternalResources.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip_export (tests.unit.common.test_resources.TestExternalResources.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_dataframe (tests.unit.common.test_resources.TestExternalResources.test_to_dataframe) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_tsv_and_from_tsv (tests.unit.common.test_resources.TestExternalResources.test_to_tsv_and_from_tsv) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_tsv_and_from_tsv_missing_entitiesidx (tests.unit.common.test_resources.TestExternalResources.test_to_tsv_and_from_tsv_missing_entitiesidx) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_tsv_and_from_tsv_missing_keyidx (tests.unit.common.test_resources.TestExternalResources.test_to_tsv_and_from_tsv_missing_keyidx) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_tsv_and_from_tsv_missing_objectidx (tests.unit.common.test_resources.TestExternalResources.test_to_tsv_and_from_tsv_missing_objectidx) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_to_tsv_and_from_tsv_missing_resourcesidx (tests.unit.common.test_resources.TestExternalResources.test_to_tsv_and_from_tsv_missing_resourcesidx) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_bad_arg (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_bad_arg) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_doesnt_exist (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_doesnt_exist) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_same_keyname_all (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_same_keyname_all) ... skipped 'Outdated do to privatization'
test_get_key_same_keyname_specific (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_same_keyname_specific) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_w_bad_object_info (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_w_bad_object_info) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_w_object_info (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_w_object_info) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_key_without_container (tests.unit.common.test_resources.TestExternalResourcesGetKey.test_get_key_without_container) ... skipped 'Outdated do to privatization'
test_add_ref_deep_nested (tests.unit.common.test_resources.TestExternalResourcesNestedAttributes.test_add_ref_deep_nested) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_ref_nested (tests.unit.common.test_resources.TestExternalResourcesNestedAttributes.test_add_ref_nested) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: ExternalResources is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_2d_data (tests.unit.common.test_sparse.TestCSRMatrix.test_2d_data) ... ok
test_array_bad_dim (tests.unit.common.test_sparse.TestCSRMatrix.test_array_bad_dim) ... ok
test_constructor_bad_indices (tests.unit.common.test_sparse.TestCSRMatrix.test_constructor_bad_indices) ... ok
test_constructor_bad_indices_dim (tests.unit.common.test_sparse.TestCSRMatrix.test_constructor_bad_indices_dim) ... ok
test_constructor_bad_shape (tests.unit.common.test_sparse.TestCSRMatrix.test_constructor_bad_shape) ... ok
test_constructor_indices_missing (tests.unit.common.test_sparse.TestCSRMatrix.test_constructor_indices_missing) ... ok
test_from_dense_2D_array (tests.unit.common.test_sparse.TestCSRMatrix.test_from_dense_2D_array) ... ok
test_from_sparse_matrix (tests.unit.common.test_sparse.TestCSRMatrix.test_from_sparse_matrix) ... ok
test_getattrs (tests.unit.common.test_sparse.TestCSRMatrix.test_getattrs) ... ok
test_to_spmat (tests.unit.common.test_sparse.TestCSRMatrix.test_to_spmat) ... ok
test_valueerror_from_ndarray (tests.unit.common.test_sparse.TestCSRMatrix.test_valueerror_from_ndarray) ... ok
test_valueerror_missing_indptr_indices_or_shape (tests.unit.common.test_sparse.TestCSRMatrix.test_valueerror_missing_indptr_indices_or_shape) ... ok
test_valueerror_non_1d_indptr_or_indicies (tests.unit.common.test_sparse.TestCSRMatrix.test_valueerror_non_1d_indptr_or_indicies) ... ok
test_valueerror_non_2D_shape (tests.unit.common.test_sparse.TestCSRMatrix.test_valueerror_non_2D_shape) ... ok
test_valueerror_non_int_indptr_or_indicies (tests.unit.common.test_sparse.TestCSRMatrix.test_valueerror_non_int_indptr_or_indicies) ... ok
test_roundtrip (tests.unit.common.test_sparse.TestCSRMatrixRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_sparse.TestCSRMatrixRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_roundtrip (tests.unit.common.test_sparse.TestCSRMatrixRoundTripFromLists.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_sparse.TestCSRMatrixRoundTripFromLists.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_get_int (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_int) ... ok
test_get_list (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_list) ... ok
test_get_list_single (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_list_single) ... ok
test_get_nested_int (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nested_int) ... ok
test_get_nested_list (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nested_list) ... ok
test_get_nested_list_single (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nested_list_single) ... ok
test_get_nested_slice (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nested_slice) ... ok
test_get_nodf_int (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nodf_int) ... ok
test_get_nodf_list (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nodf_list) ... ok
test_get_nodf_list_single (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nodf_list_single) ... ok
test_get_nodf_slice (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_nodf_slice) ... ok
test_get_slice (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_get_slice) ... ok
test_getitem_badcol (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_badcol) ... ok
test_getitem_int (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_int) ... ok
test_getitem_int_str (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_int_str)
Test DynamicTableRegion.__getitem__ with (int, str). ... ok
test_getitem_list (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_list) ... ok
test_getitem_list_single (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_list_single) ... ok
test_getitem_oor (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_oor) ... ok
test_getitem_slice (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_slice) ... ok
test_getitem_str (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_getitem_str)
Test DynamicTableRegion.__getitem__ with str. ... ok
test_roundtrip (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.DynamicTableRegionRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_double_index (tests.unit.common.test_table.TestDTDoubleIndex.test_double_index) ... ok
test_double_index_colnames (tests.unit.common.test_table.TestDTDoubleIndex.test_double_index_colnames) ... ok
test_double_index_reverse (tests.unit.common.test_table.TestDTDoubleIndex.test_double_index_reverse) ... ok
test_double_index_reverse_colnames (tests.unit.common.test_table.TestDTDoubleIndex.test_double_index_reverse_colnames) ... ok
test_index (tests.unit.common.test_table.TestDTDoubleIndexSkipMiddle.test_index) ... ok
test_dtr_references (tests.unit.common.test_table.TestDTRReferences.test_dtr_references)
Test roundtrip of a table with a ragged DTR to another table containing a column of references. ... ok
test_roundtrip (tests.unit.common.test_table.TestDataIOColumns.test_roundtrip) ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDataIOColumns.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_append (tests.unit.common.test_table.TestDataIOIndex.test_append)
Write the container to an HDF5 file, read the container from the file, and append to it. ... ok
test_roundtrip (tests.unit.common.test_table.TestDataIOIndex.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDataIOIndex.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_roundtrip (tests.unit.common.test_table.TestDataIOIndexedColumns.test_roundtrip) ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDataIOIndexedColumns.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_add_vector (tests.unit.common.test_table.TestDoubleIndex.test_add_vector) ... ok
test_index (tests.unit.common.test_table.TestDoubleIndex.test_index) ... ok
test_roundtrip (tests.unit.common.test_table.TestDoubleIndexRoundtrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDoubleIndexRoundtrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_add_column (tests.unit.common.test_table.TestDynamicTable.test_add_column) ... ok
test_add_column_auto_index_bool (tests.unit.common.test_table.TestDynamicTable.test_add_column_auto_index_bool)
Add a column as a list of lists after we have already added data so that we need to create a single VectorIndex ... ok
test_add_column_auto_index_int (tests.unit.common.test_table.TestDynamicTable.test_add_column_auto_index_int)
Add a column as a list of lists after we have already added data so that we need to create a single VectorIndex ... ok
test_add_column_auto_multi_index_int (tests.unit.common.test_table.TestDynamicTable.test_add_column_auto_multi_index_int)
Add a column as a list of lists of lists after we have already added data so that we need to create a ... ok
test_add_column_auto_multi_index_int_bad_index_levels (tests.unit.common.test_table.TestDynamicTable.test_add_column_auto_multi_index_int_bad_index_levels)
Add a column as a list of lists if lists after we have already added data so that we need to create a ... ok
test_add_column_auto_multi_index_int_with_empty_slots (tests.unit.common.test_table.TestDynamicTable.test_add_column_auto_multi_index_int_with_empty_slots)
Add a column as a list of lists of lists after we have already added data so that we need to create 2 ... ok
test_add_column_existing_attr (tests.unit.common.test_table.TestDynamicTable.test_add_column_existing_attr) ... ok
test_add_column_multi_index (tests.unit.common.test_table.TestDynamicTable.test_add_column_multi_index) ... ok
test_add_column_twice (tests.unit.common.test_table.TestDynamicTable.test_add_column_twice) ... ok
test_add_column_vectorindex (tests.unit.common.test_table.TestDynamicTable.test_add_column_vectorindex) ... ok
test_add_row (tests.unit.common.test_table.TestDynamicTable.test_add_row) ... ok
test_auto_multi_index (tests.unit.common.test_table.TestDynamicTable.test_auto_multi_index) ... ok
test_auto_multi_index_required (tests.unit.common.test_table.TestDynamicTable.test_auto_multi_index_required) ... ok
test_bad_id_type_error (tests.unit.common.test_table.TestDynamicTable.test_bad_id_type_error) ... ok
test_colnames_none (tests.unit.common.test_table.TestDynamicTable.test_colnames_none) ... ok
test_constructor_ElementIdentifier_ids (tests.unit.common.test_table.TestDynamicTable.test_constructor_ElementIdentifier_ids) ... ok
test_constructor_bad_columns (tests.unit.common.test_table.TestDynamicTable.test_constructor_bad_columns) ... ok
test_constructor_colnames (tests.unit.common.test_table.TestDynamicTable.test_constructor_colnames)
Test that passing colnames correctly sets the order of the columns. ... ok
test_constructor_colnames_no_columns (tests.unit.common.test_table.TestDynamicTable.test_constructor_colnames_no_columns)
Test that passing colnames without columns raises an error. ... ok
test_constructor_colnames_vectorindex (tests.unit.common.test_table.TestDynamicTable.test_constructor_colnames_vectorindex)
Test that passing colnames with a VectorIndex column puts the index in the right location in columns. ... ok
test_constructor_colnames_vectorindex_rev (tests.unit.common.test_table.TestDynamicTable.test_constructor_colnames_vectorindex_rev)
Test that passing colnames with a VectorIndex column puts the index in the right location in columns. ... ok
test_constructor_dup_index (tests.unit.common.test_table.TestDynamicTable.test_constructor_dup_index)
Test that passing two indices for the same column raises an error. ... ok
test_constructor_ids (tests.unit.common.test_table.TestDynamicTable.test_constructor_ids) ... ok
test_constructor_ids_bad_ids (tests.unit.common.test_table.TestDynamicTable.test_constructor_ids_bad_ids) ... ok
test_constructor_ids_default (tests.unit.common.test_table.TestDynamicTable.test_constructor_ids_default) ... ok
test_constructor_index_missing_target (tests.unit.common.test_table.TestDynamicTable.test_constructor_index_missing_target)
Test that passing an index without its target raises an error. ... ok
test_constructor_spec (tests.unit.common.test_table.TestDynamicTable.test_constructor_spec) ... ok
test_constructor_table_columns (tests.unit.common.test_table.TestDynamicTable.test_constructor_table_columns) ... ok
test_constructor_unequal_length_columns (tests.unit.common.test_table.TestDynamicTable.test_constructor_unequal_length_columns) ... ok
test_enforce_unique_id_error (tests.unit.common.test_table.TestDynamicTable.test_enforce_unique_id_error) ... ok
test_eq (tests.unit.common.test_table.TestDynamicTable.test_eq) ... ok
test_eq_bad_type (tests.unit.common.test_table.TestDynamicTable.test_eq_bad_type) ... ok
test_eq_diff_desc (tests.unit.common.test_table.TestDynamicTable.test_eq_diff_desc) ... ok
test_eq_diff_missing_col (tests.unit.common.test_table.TestDynamicTable.test_eq_diff_missing_col) ... ok
test_eq_diff_name (tests.unit.common.test_table.TestDynamicTable.test_eq_diff_name) ... ok
test_eq_from_df (tests.unit.common.test_table.TestDynamicTable.test_eq_from_df) ... ok
test_extra_columns (tests.unit.common.test_table.TestDynamicTable.test_extra_columns) ... ok
test_from_dataframe (tests.unit.common.test_table.TestDynamicTable.test_from_dataframe) ... ok
test_from_dataframe_dup_attr (tests.unit.common.test_table.TestDynamicTable.test_from_dataframe_dup_attr)
Test that when a DynamicTable is generated from a dataframe where one of the column names is an existing ... ok
test_from_dataframe_eq (tests.unit.common.test_table.TestDynamicTable.test_from_dataframe_eq) ... ok
test_get (tests.unit.common.test_table.TestDynamicTable.test_get) ... ok
test_get_item (tests.unit.common.test_table.TestDynamicTable.test_get_item) ... ok
test_get_not_found (tests.unit.common.test_table.TestDynamicTable.test_get_not_found) ... ok
test_get_not_found_default (tests.unit.common.test_table.TestDynamicTable.test_get_not_found_default) ... ok
test_getitem_col_select_and_row_slice (tests.unit.common.test_table.TestDynamicTable.test_getitem_col_select_and_row_slice) ... ok
test_getitem_column (tests.unit.common.test_table.TestDynamicTable.test_getitem_column) ... ok
test_getitem_invalid_keytype (tests.unit.common.test_table.TestDynamicTable.test_getitem_invalid_keytype) ... ok
test_getitem_list_idx (tests.unit.common.test_table.TestDynamicTable.test_getitem_list_idx) ... ok
test_getitem_point_idx (tests.unit.common.test_table.TestDynamicTable.test_getitem_point_idx) ... ok
test_getitem_point_idx_colidx (tests.unit.common.test_table.TestDynamicTable.test_getitem_point_idx_colidx) ... ok
test_getitem_point_idx_colname (tests.unit.common.test_table.TestDynamicTable.test_getitem_point_idx_colname) ... ok
test_getitem_row_num (tests.unit.common.test_table.TestDynamicTable.test_getitem_row_num) ... ok
test_getitem_row_slice (tests.unit.common.test_table.TestDynamicTable.test_getitem_row_slice) ... ok
test_getitem_row_slice_with_step (tests.unit.common.test_table.TestDynamicTable.test_getitem_row_slice_with_step) ... ok
test_id_search (tests.unit.common.test_table.TestDynamicTable.test_id_search) ... ok
test_index_out_of_bounds (tests.unit.common.test_table.TestDynamicTable.test_index_out_of_bounds) ... ok
test_init_columns_existing_attr (tests.unit.common.test_table.TestDynamicTable.test_init_columns_existing_attr) ... ok
test_missing_columns (tests.unit.common.test_table.TestDynamicTable.test_missing_columns) ... ok
test_multidim_col (tests.unit.common.test_table.TestDynamicTable.test_multidim_col) ... ok
test_multidim_col_one_elt_list (tests.unit.common.test_table.TestDynamicTable.test_multidim_col_one_elt_list) ... ok
test_multidim_col_one_elt_tuple (tests.unit.common.test_table.TestDynamicTable.test_multidim_col_one_elt_tuple) ... ok
test_nd_array_to_df (tests.unit.common.test_table.TestDynamicTable.test_nd_array_to_df) ... ok
test_no_df_nested (tests.unit.common.test_table.TestDynamicTable.test_no_df_nested) ... ok
test_not_enforce_unique_id_error (tests.unit.common.test_table.TestDynamicTable.test_not_enforce_unique_id_error) ... ok
test_pandas_roundtrip (tests.unit.common.test_table.TestDynamicTable.test_pandas_roundtrip) ... ok
test_repr (tests.unit.common.test_table.TestDynamicTable.test_repr) ... ok
test_to_dataframe (tests.unit.common.test_table.TestDynamicTable.test_to_dataframe) ... ok
test_enum (tests.unit.common.test_table.TestDynamicTableAddEnum.test_enum) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_enum_index (tests.unit.common.test_table.TestDynamicTableAddEnum.test_enum_index) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip (tests.unit.common.test_table.TestDynamicTableAddEnumRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip_export (tests.unit.common.test_table.TestDynamicTableAddEnumRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip (tests.unit.common.test_table.TestDynamicTableAddIndexRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDynamicTableAddIndexRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_add_opt_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column)
Test that adding an optional column from __columns__ with matching specs except for description works. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_opt_column_after_data (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_after_data)
Test that adding an optional column from __columns__ with data works. ... ok
test_add_opt_column_mismatched_col_cls (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_mismatched_col_cls)
Test that adding an optional column from __columns__ with non-matched table raises a warning. ... ok
test_add_opt_column_mismatched_index_data (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_mismatched_index_data)
Test that adding an optional column from __columns__ with non-matched table raises a warning. ... ok
test_add_opt_column_mismatched_index_true (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_mismatched_index_true)
Test that adding an optional column from __columns__ with non-matched table raises a warning. ... ok
test_add_opt_column_mismatched_table_table (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_mismatched_table_table)
Test that adding an optional column from __columns__ with non-matched table raises a warning. ... ok
test_add_opt_column_mismatched_table_true (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_mismatched_table_true)
Test that adding an optional column from __columns__ with non-matched table raises a warning. ... ok
test_add_opt_column_twice (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_column_twice)
Test that adding an optional column from __columns__ twice fails the second time. ... ok
test_add_opt_ind_column_after_data (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_opt_ind_column_after_data)
Test that adding an optional, indexed column from __columns__ with data works. ... ok
test_add_req_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_req_column)
Test that adding a required column from __columns__ raises an error. ... ok
test_add_req_ind_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_req_ind_column)
Test that adding a required, indexed column from __columns__ raises an error. ... ok
test_add_row_opt_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_row_opt_column)
Test that adding a row with an optional column works. ... ok
test_add_row_opt_column_after_data (tests.unit.common.test_table.TestDynamicTableClassColumns.test_add_row_opt_column_after_data)
Test that adding a row with an optional column after adding a row without the column raises an error. ... ok
test_bad_predefined_columns (tests.unit.common.test_table.TestDynamicTableClassColumns.test_bad_predefined_columns)
Test that gathering columns across a type hierarchy works. ... ok
test_gather_columns_inheritance (tests.unit.common.test_table.TestDynamicTableClassColumns.test_gather_columns_inheritance)
Test that gathering columns across a type hierarchy works. ... ok
test_init (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init)
Test that required columns, and not optional columns, in __columns__ are created on init. ... ok
test_init_columns_add_dup_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init_columns_add_dup_column)
Test that passing two columns with the same name raises an error. ... ok
test_init_columns_add_opt_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init_columns_add_opt_column)
Test that passing an optional column to init works. ... ok
test_init_columns_add_req_column (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init_columns_add_req_column)
Test that passing a required column to init works. ... ok
test_init_columns_add_req_column_mismatch_index (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init_columns_add_req_column_mismatch_index)
Test that passing a required column that does not match the predefined column specs raises an error. ... ok
test_init_columns_add_req_column_mismatch_table (tests.unit.common.test_table.TestDynamicTableClassColumns.test_init_columns_add_req_column_mismatch_table)
Test that passing a required column that does not match the predefined column specs raises an error. ... ok
test_roundtrip (tests.unit.common.test_table.TestDynamicTableInitIndexRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.TestDynamicTableInitIndexRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_dynamic_table_region_getitem_bad_index (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_getitem_bad_index) ... ok
test_dynamic_table_region_getitem_single_cell (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_getitem_single_cell) ... ok
test_dynamic_table_region_getitem_single_row_by_index (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_getitem_single_row_by_index) ... ok
test_dynamic_table_region_getitem_slice (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_getitem_slice) ... ok
test_dynamic_table_region_getitem_slice_of_column (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_getitem_slice_of_column) ... ok
test_dynamic_table_region_iteration (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_iteration) ... ok
test_dynamic_table_region_set_table_prop (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_set_table_prop) ... ok
test_dynamic_table_region_set_table_prop_to_none (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_set_table_prop_to_none) ... ok
test_dynamic_table_region_set_with_bad_data (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_set_with_bad_data) ... skipped 'we no longer check data contents for performance reasons'
test_dynamic_table_region_shape (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_shape) ... ok
test_dynamic_table_region_table_prop (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_table_prop) ... ok
test_dynamic_table_region_to_dataframe (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_to_dataframe) ... ok
test_dynamic_table_region_to_dataframe_exclude_cols (tests.unit.common.test_table.TestDynamicTableRegion.test_dynamic_table_region_to_dataframe_exclude_cols) ... ok
test_indexed_dynamic_table_region (tests.unit.common.test_table.TestDynamicTableRegion.test_indexed_dynamic_table_region) ... ok
test_no_df_nested (tests.unit.common.test_table.TestDynamicTableRegion.test_no_df_nested) ... ok
test_repr (tests.unit.common.test_table.TestDynamicTableRegion.test_repr) ... ok
test_index_out_of_bounds (tests.unit.common.test_table.TestDynamicTableRoundTrip.test_index_out_of_bounds) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip (tests.unit.common.test_table.TestDynamicTableRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_roundtrip_export (tests.unit.common.test_table.TestDynamicTableRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
/build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_identifier_search_single_int (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_int) ... ok
test_identifier_search_single_int_not_found (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_int_not_found) ... ok
test_identifier_search_single_list (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_list) ... ok
test_identifier_search_single_list_all_match (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_list_all_match) ... ok
test_identifier_search_single_list_not_found (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_list_not_found) ... ok
test_identifier_search_single_list_partial_match (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_single_list_partial_match) ... ok
test_identifier_search_with_bad_ids (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_with_bad_ids) ... ok
test_identifier_search_with_element_identifier (tests.unit.common.test_table.TestElementIdentifiers.test_identifier_search_with_element_identifier) ... ok
test_roundtrip (tests.unit.common.test_table.TestEmptyDynamicTableRoundTrip.test_roundtrip)
Test whether the container read from a written file is the same as the original file. ... ok
test_roundtrip_export (tests.unit.common.test_table.TestEmptyDynamicTableRoundTrip.test_roundtrip_export)
Test whether the container read from a written and then exported file is the same as the original file. ... ok
test_add_row (tests.unit.common.test_table.TestEnumData.test_add_row) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_row_index (tests.unit.common.test_table.TestEnumData.test_add_row_index) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get (tests.unit.common.test_table.TestEnumData.test_get) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_2d (tests.unit.common.test_table.TestEnumData.test_get_2d) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_2d_w_2d (tests.unit.common.test_table.TestEnumData.test_get_2d_w_2d) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_list (tests.unit.common.test_table.TestEnumData.test_get_list) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_list_indices (tests.unit.common.test_table.TestEnumData.test_get_list_indices) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_get_list_join (tests.unit.common.test_table.TestEnumData.test_get_list_join) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_init (tests.unit.common.test_table.TestEnumData.test_init) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_2d_row_index (tests.unit.common.test_table.TestIndexedEnumData.test_add_2d_row_index) ... skipped 'feature is not yet supported'
test_add_row (tests.unit.common.test_table.TestIndexedEnumData.test_add_row) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_add_row_index (tests.unit.common.test_table.TestIndexedEnumData.test_add_row_index) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_init (tests.unit.common.test_table.TestIndexedEnumData.test_init) ... /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py:187: UserWarning: EnumData is experimental -- it may be removed in the future and is not guaranteed to maintain backward compatibility
  warn(_exp_warn_msg(cls))
ok
test_array (tests.unit.common.test_table.TestSelectionArray.test_array) ... ok
test_array_nested (tests.unit.common.test_table.TestSelectionArray.test_array_nested) ... ok
test_array_no_df (tests.unit.common.test_table.TestSelectionArray.test_array_no_df) ... ok
test_array_single (tests.unit.common.test_table.TestSelectionArray.test_array_single) ... ok
test_array_single_nested (tests.unit.common.test_table.TestSelectionArray.test_array_single_nested) ... ok
test_array_single_no_df (tests.unit.common.test_table.TestSelectionArray.test_array_single_no_df) ... ok
test_list (tests.unit.common.test_table.TestSelectionArray.test_list) ... ok
test_list_nested (tests.unit.common.test_table.TestSelectionArray.test_list_nested) ... ok
test_list_no_df (tests.unit.common.test_table.TestSelectionArray.test_list_no_df) ... ok
test_list_single (tests.unit.common.test_table.TestSelectionArray.test_list_single) ... ok
test_list_single_nested (tests.unit.common.test_table.TestSelectionArray.test_list_single_nested) ... ok
test_list_single_no_df (tests.unit.common.test_table.TestSelectionArray.test_list_single_no_df) ... ok
test_single_item (tests.unit.common.test_table.TestSelectionArray.test_single_item) ... ok
test_single_item_nested (tests.unit.common.test_table.TestSelectionArray.test_single_item_nested) ... ok
test_single_item_no_df (tests.unit.common.test_table.TestSelectionArray.test_single_item_no_df) ... ok
test_slice (tests.unit.common.test_table.TestSelectionArray.test_slice) ... ok
test_slice_nested (tests.unit.common.test_table.TestSelectionArray.test_slice_nested) ... ok
test_slice_no_df (tests.unit.common.test_table.TestSelectionArray.test_slice_no_df) ... ok
test_slice_single (tests.unit.common.test_table.TestSelectionArray.test_slice_single) ... ok
test_slice_single_nested (tests.unit.common.test_table.TestSelectionArray.test_slice_single_nested) ... ok
test_slice_single_no_df (tests.unit.common.test_table.TestSelectionArray.test_slice_single_no_df) ... ok
test_to_dataframe (tests.unit.common.test_table.TestSelectionArray.test_to_dataframe) ... ok
test_to_dataframe_nested (tests.unit.common.test_table.TestSelectionArray.test_to_dataframe_nested) ... ok
test_array (tests.unit.common.test_table.TestSelectionH5Dataset.test_array) ... ok
test_array_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_array_nested) ... ok
test_array_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_array_no_df) ... ok
test_array_single (tests.unit.common.test_table.TestSelectionH5Dataset.test_array_single) ... ok
test_array_single_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_array_single_nested) ... ok
test_array_single_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_array_single_no_df) ... ok
test_list (tests.unit.common.test_table.TestSelectionH5Dataset.test_list) ... ok
test_list_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_list_nested) ... ok
test_list_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_list_no_df) ... ok
test_list_single (tests.unit.common.test_table.TestSelectionH5Dataset.test_list_single) ... ok
test_list_single_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_list_single_nested) ... ok
test_list_single_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_list_single_no_df) ... ok
test_single_item (tests.unit.common.test_table.TestSelectionH5Dataset.test_single_item) ... ok
test_single_item_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_single_item_nested) ... ok
test_single_item_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_single_item_no_df) ... ok
test_slice (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice) ... ok
test_slice_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice_nested) ... ok
test_slice_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice_no_df) ... ok
test_slice_single (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice_single) ... ok
test_slice_single_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice_single_nested) ... ok
test_slice_single_no_df (tests.unit.common.test_table.TestSelectionH5Dataset.test_slice_single_no_df) ... ok
test_to_dataframe (tests.unit.common.test_table.TestSelectionH5Dataset.test_to_dataframe) ... ok
test_to_dataframe_nested (tests.unit.common.test_table.TestSelectionH5Dataset.test_to_dataframe_nested) ... ok
test_array (tests.unit.common.test_table.TestSelectionList.test_array) ... ok
test_array_nested (tests.unit.common.test_table.TestSelectionList.test_array_nested) ... ok
test_array_no_df (tests.unit.common.test_table.TestSelectionList.test_array_no_df) ... ok
test_array_single (tests.unit.common.test_table.TestSelectionList.test_array_single) ... ok
test_array_single_nested (tests.unit.common.test_table.TestSelectionList.test_array_single_nested) ... ok
test_array_single_no_df (tests.unit.common.test_table.TestSelectionList.test_array_single_no_df) ... ok
test_list (tests.unit.common.test_table.TestSelectionList.test_list) ... ok
test_list_nested (tests.unit.common.test_table.TestSelectionList.test_list_nested) ... ok
test_list_no_df (tests.unit.common.test_table.TestSelectionList.test_list_no_df) ... ok
test_list_single (tests.unit.common.test_table.TestSelectionList.test_list_single) ... ok
test_list_single_nested (tests.unit.common.test_table.TestSelectionList.test_list_single_nested) ... ok
test_list_single_no_df (tests.unit.common.test_table.TestSelectionList.test_list_single_no_df) ... ok
test_single_item (tests.unit.common.test_table.TestSelectionList.test_single_item) ... ok
test_single_item_nested (tests.unit.common.test_table.TestSelectionList.test_single_item_nested) ... ok
test_single_item_no_df (tests.unit.common.test_table.TestSelectionList.test_single_item_no_df) ... ok
test_slice (tests.unit.common.test_table.TestSelectionList.test_slice) ... ok
test_slice_nested (tests.unit.common.test_table.TestSelectionList.test_slice_nested) ... ok
test_slice_no_df (tests.unit.common.test_table.TestSelectionList.test_slice_no_df) ... ok
test_slice_single (tests.unit.common.test_table.TestSelectionList.test_slice_single) ... ok
test_slice_single_nested (tests.unit.common.test_table.TestSelectionList.test_slice_single_nested) ... ok
test_slice_single_no_df (tests.unit.common.test_table.TestSelectionList.test_slice_single_no_df) ... ok
test_to_dataframe (tests.unit.common.test_table.TestSelectionList.test_to_dataframe) ... ok
test_to_dataframe_nested (tests.unit.common.test_table.TestSelectionList.test_to_dataframe_nested) ... ok
test_init_data (tests.unit.common.test_table.TestVectorIndex.test_init_data) ... ok
test_init_empty (tests.unit.common.test_table.TestVectorIndex.test_init_empty) ... ok
test_array_inc_precision (tests.unit.common.test_table.TestVectorIndexDtype.test_array_inc_precision) ... ok
test_array_inc_precision_1step (tests.unit.common.test_table.TestVectorIndexDtype.test_array_inc_precision_1step) ... ok
test_array_inc_precision_2steps (tests.unit.common.test_table.TestVectorIndexDtype.test_array_inc_precision_2steps) ... ok
test_array_prev_data_inc_precision_2steps (tests.unit.common.test_table.TestVectorIndexDtype.test_array_prev_data_inc_precision_2steps) ... ok
test_list_inc_precision (tests.unit.common.test_table.TestVectorIndexDtype.test_list_inc_precision) ... ok
test_list_inc_precision_1step (tests.unit.common.test_table.TestVectorIndexDtype.test_list_inc_precision_1step) ... ok
test_list_inc_precision_2steps (tests.unit.common.test_table.TestVectorIndexDtype.test_list_inc_precision_2steps) ... ok
test_list_prev_data_inc_precision_2steps (tests.unit.common.test_table.TestVectorIndexDtype.test_list_prev_data_inc_precision_2steps) ... ok
test_both_value_and_default_value_set (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_both_value_and_default_value_set) ... ok
test_build_spec (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_build_spec) ... ok
test_build_spec_no_doc (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_build_spec_no_doc) ... ok
test_build_spec_reftype (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_build_spec_reftype) ... ok
test_colliding_shape_and_dims (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_colliding_shape_and_dims) ... ok
test_constructor (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_constructor) ... ok
test_default_value (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_default_value) ... ok
test_dims_without_shape (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_dims_without_shape) ... ok
test_invalid_dtype (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_invalid_dtype) ... ok
test_shape (tests.unit.spec_tests.test_attribute_spec.AttributeSpecTests.test_shape) ... ok
test_constructor (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor) ... ok
test_constructor_datatype (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_datatype) ... ok
test_constructor_default_value (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_default_value) ... ok
test_constructor_invalid_table (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_invalid_table) ... ok
test_constructor_invalidate_dtype (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_invalidate_dtype) ... ok
test_constructor_ref_spec (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_ref_spec) ... ok
test_constructor_shape (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_shape) ... ok
test_constructor_table (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_constructor_table) ... ok
test_data_type_property_value (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_data_type_property_value)
Test that the property data_type has the expected value ... ok
test_datatype_extension (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_extension) ... ok
test_datatype_extension_groupspec (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_extension_groupspec)
Test to make sure DatasetSpec catches when a GroupSpec used as data_type_inc ... ok
test_datatype_table_extension (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_table_extension) ... ok
test_datatype_table_extension_diff_format (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_table_extension_diff_format) ... ok
test_datatype_table_extension_higher_precision (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_table_extension_higher_precision) ... ok
test_datatype_table_extension_lower_precision (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_datatype_table_extension_lower_precision) ... ok
test_name_with_compatible_quantity (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_name_with_compatible_quantity) ... ok
test_name_with_incompatible_quantity (tests.unit.spec_tests.test_dataset_spec.DatasetSpecTests.test_name_with_incompatible_quantity) ... ok
test_check_dtype_bad (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_check_dtype_bad) ... ok
test_check_dtype_ok (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_check_dtype_ok) ... ok
test_check_dtype_ref (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_check_dtype_ref) ... ok
test_recommended_dtypes (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_recommended_dtypes) ... ok
test_simplify_cpd_type (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_simplify_cpd_type) ... ok
test_simplify_cpd_type_ref (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_simplify_cpd_type_ref) ... ok
test_valid_primary_dtypes (tests.unit.spec_tests.test_dtype_spec.DtypeSpecHelper.test_valid_primary_dtypes) ... ok
test_build_spec (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_build_spec) ... ok
test_constructor (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_constructor) ... ok
test_invalid_dtype (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_invalid_dtype) ... ok
test_invalid_refspec_dict (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_invalid_refspec_dict)
Test missing or bad target key for RefSpec. ... ok
test_is_ref (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_is_ref) ... ok
test_refspec_dtype (tests.unit.spec_tests.test_dtype_spec.DtypeSpecTests.test_refspec_dtype) ... ok
test_add_attribute (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_add_attribute) ... ok
test_add_group (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_add_group) ... ok
test_add_link (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_add_link) ... ok
test_constructor (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_constructor) ... ok
test_constructor_datatype (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_constructor_datatype) ... ok
test_data_type_property_value (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_data_type_property_value)
Test that the property data_type has the expected value ... ok
test_get_data_type_spec (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_get_data_type_spec) ... ok
test_get_namespace_spec (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_get_namespace_spec) ... ok
test_path (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_path) ... ok
test_path_complicated (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_path_complicated) ... ok
test_path_no_name (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_path_no_name) ... ok
test_set_dataset (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_set_dataset) ... ok
test_set_group (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_set_group) ... ok
test_set_link (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_set_link) ... ok
test_set_parent_exists (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_set_parent_exists) ... ok
test_type_extension (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_type_extension) ... ok
test_update_attribute_spec (tests.unit.spec_tests.test_group_spec.GroupSpecTests.test_update_attribute_spec) ... ok
test_constructor (tests.unit.spec_tests.test_group_spec.GroupSpecWithLinksTest.test_constructor) ... ok
test_extension_no_overwrite (tests.unit.spec_tests.test_group_spec.GroupSpecWithLinksTest.test_extension_no_overwrite) ... ok
test_extension_overwrite (tests.unit.spec_tests.test_group_spec.GroupSpecWithLinksTest.test_extension_overwrite) ... ok
test_named_unnamed_dataset_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_named_unnamed_dataset_same_type)
Test get_data_type when a group contains both a named and unnamed dataset with type X. ... ok
test_named_unnamed_dataset_with_def_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_named_unnamed_dataset_with_def_same_type)
Test get_data_type when a group contains both a named and unnamed dataset with type X. ... ok
test_named_unnamed_group_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_named_unnamed_group_same_type)
Test get_data_type when a group contains both a named and unnamed group with type X. ... ok
test_named_unnamed_group_with_def_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_named_unnamed_group_with_def_same_type)
Test get_data_type when a group contains both a named and unnamed group with type X. ... ok
test_named_unnamed_link_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_named_unnamed_link_same_type)
Test get_target_type when a group contains both a named and unnamed link with type X. ... ok
test_three_named_datasets_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_three_named_datasets_same_type)
Test get_target_type when a group contains three named links with type X. ... ok
test_three_named_links_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_three_named_links_same_type)
Test get_target_type when a group contains three named links with type X. ... ok
test_two_named_datasets_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_named_datasets_same_type)
Test get_data_type when a group contains multiple named datasets with type X. ... ok
test_two_named_group_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_named_group_same_type)
Test get_data_type when a group contains multiple named groups with type X. ... ok
test_two_named_links_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_named_links_same_type)
Test get_target_type when a group contains multiple named links with type X. ... ok
test_two_named_unnamed_dataset_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_named_unnamed_dataset_same_type)
Test get_data_type when a group contains two named and one unnamed dataset with type X. ... ok
test_two_named_unnamed_link_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_named_unnamed_link_same_type)
Test get_target_type when a group contains two named and one unnamed link with type X. ... ok
test_two_unnamed_datasets_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_unnamed_datasets_same_type)
Test creating a group contains multiple unnamed datasets with type X. ... ok
test_two_unnamed_group_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_unnamed_group_same_type)
Test creating a group contains multiple unnamed groups with type X. ... ok
test_two_unnamed_links_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_two_unnamed_links_same_type)
Test creating a group contains multiple unnamed links with type X. ... ok
test_unnamed_named_dataset_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_unnamed_named_dataset_same_type)
Test get_data_type when a group contains both an unnamed and named dataset with type X. ... ok
test_unnamed_named_group_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_unnamed_named_group_same_type)
Test get_data_type when a group contains both an unnamed and named group with type X. ... ok
test_unnamed_named_link_same_type (tests.unit.spec_tests.test_group_spec.SpecWithDupsTest.test_unnamed_named_link_same_type)
Test get_target_type when a group contains both an unnamed and named link with type X. ... ok
test_unnamed_dataset_link_same_type (tests.unit.spec_tests.test_group_spec.SpecWithGroupsLinksTest.test_unnamed_dataset_link_same_type) ... ok
test_unnamed_group_link_same_type (tests.unit.spec_tests.test_group_spec.SpecWithGroupsLinksTest.test_unnamed_group_link_same_type) ... ok
test_name_with_multiple (tests.unit.spec_tests.test_group_spec.TestNotAllowedConfig.test_name_with_multiple) ... ok
test_no_name_no_def_no_inc (tests.unit.spec_tests.test_group_spec.TestNotAllowedConfig.test_no_name_no_def_no_inc) ... ok
test_is_inherited_attribute (tests.unit.spec_tests.test_group_spec.TestResolveAttrs.test_is_inherited_attribute) ... ok
test_is_inherited_spec (tests.unit.spec_tests.test_group_spec.TestResolveAttrs.test_is_inherited_spec) ... ok
test_is_overridden_attribute (tests.unit.spec_tests.test_group_spec.TestResolveAttrs.test_is_overridden_attribute) ... ok
test_is_overridden_spec (tests.unit.spec_tests.test_group_spec.TestResolveAttrs.test_is_overridden_spec) ... ok
test_resolved (tests.unit.spec_tests.test_group_spec.TestResolveAttrs.test_resolved) ... ok
test_constructor (tests.unit.spec_tests.test_link_spec.LinkSpecTests.test_constructor) ... ok
test_constructor_defaults (tests.unit.spec_tests.test_link_spec.LinkSpecTests.test_constructor_defaults) ... ok
test_constructor_target_spec_def (tests.unit.spec_tests.test_link_spec.LinkSpecTests.test_constructor_target_spec_def) ... ok
test_constructor_target_spec_inc (tests.unit.spec_tests.test_link_spec.LinkSpecTests.test_constructor_target_spec_inc) ... ok
test_required_is_many (tests.unit.spec_tests.test_link_spec.LinkSpecTests.test_required_is_many) ... ok
test_catch_dup_name (tests.unit.spec_tests.test_load_namespace.TestCatchDupNS.test_catch_dup_name) ... ok
test_catch_dup_name_same_version (tests.unit.spec_tests.test_load_namespace.TestCatchDupNS.test_catch_dup_name_same_version) ... ok
test_constructor_getters (tests.unit.spec_tests.test_load_namespace.TestCustomSpecClasses.test_constructor_getters) ... ok
test_load_namespaces (tests.unit.spec_tests.test_load_namespace.TestCustomSpecClasses.test_load_namespaces) ... ok
test_load_namespaces_bad_path (tests.unit.spec_tests.test_load_namespace.TestCustomSpecClasses.test_load_namespaces_bad_path) ... ok
test_load_namespaces_ext (tests.unit.spec_tests.test_load_namespace.TestCustomSpecClasses.test_load_namespaces_ext) ... ok
test_load_namespaces_twice (tests.unit.spec_tests.test_load_namespace.TestCustomSpecClasses.test_load_namespaces_twice) ... ok
test_inherited_attributes (tests.unit.spec_tests.test_load_namespace.TestSpecLoad.test_inherited_attributes) ... ok
test_inherited_attributes_not_resolved (tests.unit.spec_tests.test_load_namespace.TestSpecLoad.test_inherited_attributes_not_resolved) ... ok
test_build_namespace_missing_version (tests.unit.spec_tests.test_load_namespace.TestSpecLoadEdgeCase.test_build_namespace_missing_version)
Test that building/creating a SpecNamespace without a version works but raises a warning. ... ok
test_get_namespace_missing_version (tests.unit.spec_tests.test_load_namespace.TestSpecLoadEdgeCase.test_get_namespace_missing_version)
Test that SpecNamespace.version returns the constant for a missing version if version gets removed. ... ok
test_load_namespace_none_version (tests.unit.spec_tests.test_load_namespace.TestSpecLoadEdgeCase.test_load_namespace_none_version)
Test that reading a namespace file without a version works but raises a warning. ... ok
test_load_namespace_unversioned_version (tests.unit.spec_tests.test_load_namespace.TestSpecLoadEdgeCase.test_load_namespace_unversioned_version)
Test that reading a namespace file with version=unversioned string works but raises a warning. ... ok
test_missing_version_string (tests.unit.spec_tests.test_load_namespace.TestSpecLoadEdgeCase.test_missing_version_string)
Test that the constant variable representing a missing version has not changed. ... ok
test_constructor (tests.unit.spec_tests.test_ref_spec.RefSpecTests.test_constructor) ... ok
test_isregion (tests.unit.spec_tests.test_ref_spec.RefSpecTests.test_isregion) ... ok
test_wrong_reference_type (tests.unit.spec_tests.test_ref_spec.RefSpecTests.test_wrong_reference_type) ... ok
test_catch_duplicate_spec_different (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_catch_duplicate_spec_different) ... ok
test_catch_duplicate_spec_different_source (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_catch_duplicate_spec_different_source) ... ok
test_catch_duplicate_spec_nested (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_catch_duplicate_spec_nested) ... ok
test_copy_spec_catalog (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_copy_spec_catalog) ... ok
test_deepcopy_spec_catalog (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_deepcopy_spec_catalog) ... ok
test_get_full_hierarchy (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_get_full_hierarchy)
BaseContainer--+-->AContainer--->ADContainer ... ok
test_get_spec_source_file (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_get_spec_source_file) ... ok
test_hierarchy (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_hierarchy) ... ok
test_register_spec (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_register_spec) ... ok
test_subtypes (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_subtypes)
-BaseContainer--+-->AContainer--->ADContainer ... ok
test_subtypes_norecursion (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_subtypes_norecursion)
-BaseContainer--+-->AContainer--->ADContainer ... ok
test_subtypes_unknown_type (tests.unit.spec_tests.test_spec_catalog.SpecCatalogTest.test_subtypes_unknown_type) ... ok
test_export (tests.unit.spec_tests.test_spec_write.TestExportSpec.test_export)
Test that export_spec writes the correct files. ... ok
test_missing_data_types (tests.unit.spec_tests.test_spec_write.TestExportSpec.test_missing_data_types)
Test that calling export_spec on a namespace builder without data types raises a warning. ... ok
test_export_namespace (tests.unit.spec_tests.test_spec_write.TestNamespaceBuilder.test_export_namespace) ... ok
test_get_source_description (tests.unit.spec_tests.test_spec_write.TestNamespaceBuilder.test_get_source_description) ... ok
test_get_source_files (tests.unit.spec_tests.test_spec_write.TestNamespaceBuilder.test_get_source_files) ... ok
test_missing_version (tests.unit.spec_tests.test_spec_write.TestNamespaceBuilder.test_missing_version)
Test that creating a namespace builder without a version raises an error. ... ok
test_read_namespace (tests.unit.spec_tests.test_spec_write.TestNamespaceBuilder.test_read_namespace) ... ok
test_get_name (tests.unit.spec_tests.test_spec_write.TestYAMLSpecWrite.test_get_name) ... ok
test_init (tests.unit.spec_tests.test_spec_write.TestYAMLSpecWrite.test_init) ... ok
test_write_namespace (tests.unit.spec_tests.test_spec_write.TestYAMLSpecWrite.test_write_namespace) ... ok
test_bad_field_conf_key (tests.unit.test_container.TestAbstractContainerFieldsConf.test_bad_field_conf_key) ... ok
test_bad_field_missing_name (tests.unit.test_container.TestAbstractContainerFieldsConf.test_bad_field_missing_name) ... ok
test_bad_fields_type (tests.unit.test_container.TestAbstractContainerFieldsConf.test_bad_fields_type) ... ok
test_empty_fields (tests.unit.test_container.TestAbstractContainerFieldsConf.test_empty_fields) ... ok
test_inheritance (tests.unit.test_container.TestAbstractContainerFieldsConf.test_inheritance) ... ok
test_inheritance_override (tests.unit.test_container.TestAbstractContainerFieldsConf.test_inheritance_override) ... ok
test_mult_inheritance_base_container (tests.unit.test_container.TestAbstractContainerFieldsConf.test_mult_inheritance_base_container) ... ok
test_mult_inheritance_base_mixin (tests.unit.test_container.TestAbstractContainerFieldsConf.test_mult_inheritance_base_mixin) ... ok
test_named_fields (tests.unit.test_container.TestAbstractContainerFieldsConf.test_named_fields) ... ok
test_not_settable (tests.unit.test_container.TestAbstractContainerFieldsConf.test_not_settable)
Test that __fields__ related attributes are set correctly. ... ok
test_with_doc (tests.unit.test_container.TestAbstractContainerFieldsConf.test_with_doc)
Test that __fields__ related attributes are set correctly. ... ok
test_fields (tests.unit.test_container.TestChangeFieldsName.test_fields) ... ok
test_fields_inheritance (tests.unit.test_container.TestChangeFieldsName.test_fields_inheritance) ... ok
test_add_child (tests.unit.test_container.TestContainer.test_add_child)
Test that add child creates deprecation warning and also properly sets child's parent and modified ... ok
test_generate_new_id_child (tests.unit.test_container.TestContainer.test_generate_new_id_child)
Test that generate_new_id sets a new ID on the container and not its parent and sets modified on both. ... ok
test_generate_new_id_parent (tests.unit.test_container.TestContainer.test_generate_new_id_parent)
Test that generate_new_id sets a new ID on the container and its children and sets modified on all. ... ok
test_generate_new_id_parent_no_recurse (tests.unit.test_container.TestContainer.test_generate_new_id_parent_no_recurse)
Test that generate_new_id(recurse=False) sets a new ID on the container and not its children. ... ok
test_init (tests.unit.test_container.TestContainer.test_init)
Test that __init__ properly sets object ID and other fields. ... ok
test_new (tests.unit.test_container.TestContainer.test_new)
Test that __new__ properly sets parent and other fields. ... ok
test_new_construct_mode (tests.unit.test_container.TestContainer.test_new_construct_mode)
Test that passing in_construct_mode to __new__ sets _in_construct_mode and _in_construct_mode can be reset. ... ok
test_new_object_id_none (tests.unit.test_container.TestContainer.test_new_object_id_none)
Test that passing object_id=None to __new__ is OK and results in a non-None object ID being assigned. ... ok
test_reassign_container_source (tests.unit.test_container.TestContainer.test_reassign_container_source)
Test that reassign container source throws error ... ok
test_remove_child (tests.unit.test_container.TestContainer.test_remove_child)
Test that removing a child removes only the child. ... ok
test_remove_child_nonchild (tests.unit.test_container.TestContainer.test_remove_child_nonchild)
Test that removing a non-Container child raises an error. ... ok
test_remove_child_noncontainer (tests.unit.test_container.TestContainer.test_remove_child_noncontainer)
Test that removing a non-Container child raises an error. ... ok
test_repr (tests.unit.test_container.TestContainer.test_repr) ... ok
test_reset_parent (tests.unit.test_container.TestContainer.test_reset_parent)
Test that removing a child removes only the child. ... ok
test_reset_parent_no_parent (tests.unit.test_container.TestContainer.test_reset_parent_no_parent)
Test that resetting a non-existent parent has no effect. ... ok
test_reset_parent_parent_noncontainer (tests.unit.test_container.TestContainer.test_reset_parent_parent_noncontainer)
Test that resetting a parent that is not a container raises an error. ... ok
test_set_modified_parent (tests.unit.test_container.TestContainer.test_set_modified_parent)
Test that set modified properly sets parent modified ... ok
test_set_parent (tests.unit.test_container.TestContainer.test_set_parent)
Test that parent setter properly sets parent ... ok
test_set_parent_exists (tests.unit.test_container.TestContainer.test_set_parent_exists)
Test that setting a parent a second time does nothing ... ok
test_set_parent_overwrite (tests.unit.test_container.TestContainer.test_set_parent_overwrite)
Test that parent setter properly blocks overwriting ... ok
test_set_parent_overwrite_proxy (tests.unit.test_container.TestContainer.test_set_parent_overwrite_proxy)
Test that parent setter properly blocks overwriting with proxy/object ... ok
test_slash_restriction (tests.unit.test_container.TestContainer.test_slash_restriction) ... ok
test_type_hierarchy (tests.unit.test_container.TestContainer.test_type_hierarchy) ... ok
test_child (tests.unit.test_container.TestContainerFieldsConf.test_child) ... ok
test_required_name (tests.unit.test_container.TestContainerFieldsConf.test_required_name) ... ok
test_setter_set_modified (tests.unit.test_container.TestContainerFieldsConf.test_setter_set_modified) ... ok
test_bool_false (tests.unit.test_container.TestData.test_bool_false)
Test that __bool__ method works correctly on empty data ... ok
test_bool_true (tests.unit.test_container.TestData.test_bool_true)
Test that __bool__ method works correctly on data with len ... ok
test_constructor_scalar (tests.unit.test_container.TestData.test_constructor_scalar)
Test that constructor works correctly on scalar data ... ok
test_shape_list (tests.unit.test_container.TestData.test_shape_list)
Test that shape works for np.array ... ok
test_shape_nparray (tests.unit.test_container.TestData.test_shape_nparray)
Test that shape works for np.array ... ok
test_dataset_shape (tests.unit.test_io_hdf5.TestHDF5Writer.test_dataset_shape) ... ok
test_read_builder (tests.unit.test_io_hdf5.TestHDF5Writer.test_read_builder) ... ok
test_write_attribute_reference_builder (tests.unit.test_io_hdf5.TestHDF5Writer.test_write_attribute_reference_builder) ... ok
test_write_attribute_reference_container (tests.unit.test_io_hdf5.TestHDF5Writer.test_write_attribute_reference_container) ... ok
test_write_builder (tests.unit.test_io_hdf5.TestHDF5Writer.test_write_builder) ... ok
test_write_context_manager (tests.unit.test_io_hdf5.TestHDF5Writer.test_write_context_manager) ... ok
test_dataio_bad_args (tests.unit.test_io_hdf5_h5tools.H5DataIOTests.test_dataio_bad_args) ... ok
test_dataio_len (tests.unit.test_io_hdf5_h5tools.H5DataIOTests.test_dataio_len) ... ok
test_dataio_shape_then_data (tests.unit.test_io_hdf5_h5tools.H5DataIOTests.test_dataio_shape_then_data) ... ok
test_link (tests.unit.test_io_hdf5_h5tools.H5DataIOValid.test_link)
Test that wrapping of linked data within H5DataIO ... ok
test_read_valid (tests.unit.test_io_hdf5_h5tools.H5DataIOValid.test_read_valid)
Test that h5py.H5Dataset.id.valid works as expected ... ok
test_valid (tests.unit.test_io_hdf5_h5tools.H5DataIOValid.test_valid) ... ok
test__chunked_iter_fill (tests.unit.test_io_hdf5_h5tools.H5IOTest.test__chunked_iter_fill)
Matrix test of HDF5IO.__chunked_iter_fill__ using a DataChunkIterator with different parameters ... ok
test_chunk_shape_override_through_wrapper (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_chunk_shape_override_through_wrapper) ... ok
test_copy_h5py_dataset_h5dataio_input (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_copy_h5py_dataset_h5dataio_input) ... ok
test_copy_h5py_dataset_input (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_copy_h5py_dataset_input) ... ok
test_dci_h5dataset (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_dci_h5dataset) ... ok
test_dci_h5dataset_scalar (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_dci_h5dataset_scalar) ... ok
test_dci_h5dataset_sparse_matched (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_dci_h5dataset_sparse_matched) ... ok
test_dci_h5dataset_sparse_unmatched (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_dci_h5dataset_sparse_unmatched) ... ok
test_error_on_unsupported_compression_filter (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_error_on_unsupported_compression_filter) ... ok
test_h5dataio_array_conversion_datachunkiterator (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_h5dataio_array_conversion_datachunkiterator) ... ok
test_h5dataio_array_conversion_list (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_h5dataio_array_conversion_list) ... ok
test_h5dataio_array_conversion_numpy (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_h5dataio_array_conversion_numpy) ... ok
test_link_h5py_dataset_h5dataio_input (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_link_h5py_dataset_h5dataio_input) ... ok
test_link_h5py_dataset_input (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_link_h5py_dataset_input) ... ok
test_list_fill_empty (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_list_fill_empty) ... ok
test_list_fill_empty_no_dtype (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_list_fill_empty_no_dtype) ... ok
test_pass_through_of_chunk_shape_generic_data_chunk_iterator (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_pass_through_of_chunk_shape_generic_data_chunk_iterator) ... ok
test_pass_through_of_recommended_chunks (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_pass_through_of_recommended_chunks) ... ok
test_read_str (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_read_str) ... ok
test_value_error_on_incompatible_compression_opts (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_value_error_on_incompatible_compression_opts) ... ok
test_warning_on_linking_of_regular_array (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_warning_on_linking_of_regular_array) ... ok
test_warning_on_non_gzip_compression (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_warning_on_non_gzip_compression) ... ok
test_warning_on_setting_io_options_on_h5dataset_input (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_warning_on_setting_io_options_on_h5dataset_input) ... ok
test_write_dataset_data_chunk_iterator (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_data_chunk_iterator) ... ok
test_write_dataset_data_chunk_iterator_with_compression (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_data_chunk_iterator_with_compression) ... ok
test_write_dataset_generic_data_chunk_iterator (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_generic_data_chunk_iterator) ... ok
test_write_dataset_generic_data_chunk_iterator_with_compression (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_generic_data_chunk_iterator_with_compression) ... ok
test_write_dataset_iterable (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_iterable) ... ok
test_write_dataset_iterable_multidimensional_array (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_iterable_multidimensional_array) ... ok
test_write_dataset_iterable_multidimensional_array_compression (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_iterable_multidimensional_array_compression) ... ok
test_write_dataset_list (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list) ... ok
test_write_dataset_list_chunked (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_chunked) ... ok
test_write_dataset_list_compress_available_int_filters (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_compress_available_int_filters) ... ok
test_write_dataset_list_compress_gzip (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_compress_gzip) ... ok
test_write_dataset_list_compress_lzf (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_compress_lzf) ... ok
test_write_dataset_list_compress_szip (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_compress_szip) ... ok
test_write_dataset_list_disable_default_compress (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_disable_default_compress) ... ok
test_write_dataset_list_enable_default_compress (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_enable_default_compress) ... ok
test_write_dataset_list_fillvalue (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_list_fillvalue) ... ok
test_write_dataset_scalar (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_scalar) ... ok
test_write_dataset_string (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_dataset_string) ... ok
test_write_multi_dci_conc (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_multi_dci_conc)
Test writing multiple DataChunkIterators, concurrently ... ok
test_write_multi_dci_oaat (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_multi_dci_oaat)
Test writing multiple DataChunkIterators, one at a time ... ok
test_write_table (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_table) ... ok
test_write_table_nested (tests.unit.test_io_hdf5_h5tools.H5IOTest.test_write_table_nested) ... ok
test_setup_empty_dset (tests.unit.test_io_hdf5_h5tools.HDF5IOClassmethodTests.test_setup_empty_dset) ... ok
test_setup_empty_dset_create_exception (tests.unit.test_io_hdf5_h5tools.HDF5IOClassmethodTests.test_setup_empty_dset_create_exception) ... ok
test_setup_empty_dset_req_args (tests.unit.test_io_hdf5_h5tools.HDF5IOClassmethodTests.test_setup_empty_dset_req_args) ... ok
test_overwrite_dataset (tests.unit.test_io_hdf5_h5tools.HDF5IOEmptyDataset.test_overwrite_dataset) ... ok
test_write_empty_dataset (tests.unit.test_io_hdf5_h5tools.HDF5IOEmptyDataset.test_write_empty_dataset) ... ok
test_init_file_exists_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOInitFileExistsTest.test_init_file_exists_ok) ... ok
test_init_wminus_file_exists (tests.unit.test_io_hdf5_h5tools.HDF5IOInitFileExistsTest.test_init_wminus_file_exists) ... ok
test_init_x_file_exists (tests.unit.test_io_hdf5_h5tools.HDF5IOInitFileExistsTest.test_init_x_file_exists) ... ok
test_init_no_file_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOInitNoFileTest.test_init_no_file_ok) ... ok
test_init_no_file_r (tests.unit.test_io_hdf5_h5tools.HDF5IOInitNoFileTest.test_init_no_file_r) ... ok
test_init_no_file_rplus (tests.unit.test_io_hdf5_h5tools.HDF5IOInitNoFileTest.test_init_no_file_rplus) ... ok
test_copy_file_with_external_links (tests.unit.test_io_hdf5_h5tools.HDF5IOMultiFileTest.test_copy_file_with_external_links) ... ok
test_read_closed (tests.unit.test_io_hdf5_h5tools.HDF5IOReadBuilderClosed.test_read_closed) ... ok
test_read_file_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOReadData.test_read_file_ok) ... ok
test_read_file_w (tests.unit.test_io_hdf5_h5tools.HDF5IOReadData.test_read_file_w) ... ok
test_read_no_data_a (tests.unit.test_io_hdf5_h5tools.HDF5IOReadNoDataTest.test_read_no_data_a) ... ok
test_read_no_data_r (tests.unit.test_io_hdf5_h5tools.HDF5IOReadNoDataTest.test_read_no_data_r) ... ok
test_read_no_data_rplus (tests.unit.test_io_hdf5_h5tools.HDF5IOReadNoDataTest.test_read_no_data_rplus) ... ok
test_write_a (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteFileExists.test_write_a) ... ok
test_write_r (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteFileExists.test_write_r) ... ok
test_write_rplus (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteFileExists.test_write_rplus) ... ok
test_write_w (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteFileExists.test_write_w) ... ok
test_write_no_file_a_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteNoFile.test_write_no_file_a_ok) ... ok
test_write_no_file_w_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteNoFile.test_write_no_file_w_ok) ... ok
test_write_no_file_wminus_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteNoFile.test_write_no_file_wminus_ok) ... ok
test_write_no_file_x_ok (tests.unit.test_io_hdf5_h5tools.HDF5IOWriteNoFile.test_write_no_file_x_ok) ... ok
test_external_link_to_external_link (tests.unit.test_io_hdf5_h5tools.TestBuildWriteLinkToLink.test_external_link_to_external_link)
Test writing a file with external links to external links. ... ok
test_external_link_to_soft_link (tests.unit.test_io_hdf5_h5tools.TestBuildWriteLinkToLink.test_external_link_to_soft_link)
Test writing a file with external links to external links. ... ok
test_cache_spec (tests.unit.test_io_hdf5_h5tools.TestCacheSpec.test_cache_spec) ... ok
test_close_linked_files_auto (tests.unit.test_io_hdf5_h5tools.TestCloseLinks.test_close_linked_files_auto)
Test closing a file with close_links=True (default). ... ok
test_close_linked_files_explicit (tests.unit.test_io_hdf5_h5tools.TestCloseLinks.test_close_linked_files_explicit)
Test closing a file with close_links=False and calling close_linked_files(). ... ok
test_close_linked_files_not_disruptive (tests.unit.test_io_hdf5_h5tools.TestCloseLinks.test_close_linked_files_not_disruptive)
Test closing a file with close_links=True (default) does not interfere with other open file handles. ... ok
test_close_links_manually_and_close (tests.unit.test_io_hdf5_h5tools.TestCloseLinks.test_close_links_manually_and_close)
Test closing a file with close_links=False, manually closing open links, and calling close_linked_files(). ... ok
test_roundtrip (tests.unit.test_io_hdf5_h5tools.TestCpdDatasetRefs.test_roundtrip) ... ok
test_roundtrip (tests.unit.test_io_hdf5_h5tools.TestDatasetRefs.test_roundtrip) ... ok
test_append_data (tests.unit.test_io_hdf5_h5tools.TestExport.test_append_data)
Test that exporting a written container after adding groups, links, and references to it works. ... ok
test_append_external_link_copy_data (tests.unit.test_io_hdf5_h5tools.TestExport.test_append_external_link_copy_data)
Test that exporting a written container after adding a link with link_data=False copies the data. ... ok
test_append_external_link_data (tests.unit.test_io_hdf5_h5tools.TestExport.test_append_external_link_data)
Test that exporting a written container after adding a link with link_data=True creates external links. ... ok
test_attr_reference (tests.unit.test_io_hdf5_h5tools.TestExport.test_attr_reference)
Test that exporting a written file with attribute references maintains the references. ... ok
test_basic (tests.unit.test_io_hdf5_h5tools.TestExport.test_basic)
Test that exporting a written container works. ... ok
test_basic_container (tests.unit.test_io_hdf5_h5tools.TestExport.test_basic_container)
Test that exporting a written container, passing in the container arg, works. ... ok
test_cache_spec_false (tests.unit.test_io_hdf5_h5tools.TestExport.test_cache_spec_false)
Test that exporting with cache_spec works. ... ok
test_container_part (tests.unit.test_io_hdf5_h5tools.TestExport.test_container_part)
Test that exporting a part of a written container raises an error. ... ok
test_container_unknown (tests.unit.test_io_hdf5_h5tools.TestExport.test_container_unknown)
Test that exporting a container that did not come from the src_io object raises an error. ... ok
test_export_cpd_dset_refs (tests.unit.test_io_hdf5_h5tools.TestExport.test_export_cpd_dset_refs)
Test that exporting a written container with a compound dataset with references works. ... ok
test_export_dset_refs (tests.unit.test_io_hdf5_h5tools.TestExport.test_export_dset_refs)
Test that exporting a written container with a dataset of references works. ... ok
test_export_io (tests.unit.test_io_hdf5_h5tools.TestExport.test_export_io)
Test that exporting a written container using HDF5IO.export_io works. ... ok
test_external_link_dataset (tests.unit.test_io_hdf5_h5tools.TestExport.test_external_link_dataset)
Test that exporting a written file with external linked datasets maintains the links. ... ok
test_external_link_group (tests.unit.test_io_hdf5_h5tools.TestExport.test_external_link_group)
Test that exporting a written file with external linked groups maintains the links. ... ok
test_external_link_link (tests.unit.test_io_hdf5_h5tools.TestExport.test_external_link_link)
Test that exporting a written file with external links to external links maintains the links. ... ok
test_new_soft_link (tests.unit.test_io_hdf5_h5tools.TestExport.test_new_soft_link)
Test that exporting a file with a newly created soft link makes the link internally. ... ok
test_non_HDF5_src_link_data_true (tests.unit.test_io_hdf5_h5tools.TestExport.test_non_HDF5_src_link_data_true)
Test that exporting with a src_io without a manager raises an error. ... ok
test_non_manager_container (tests.unit.test_io_hdf5_h5tools.TestExport.test_non_manager_container)
Test that exporting with a src_io without a manager raises an error. ... ok
test_pop_data (tests.unit.test_io_hdf5_h5tools.TestExport.test_pop_data)
Test that exporting a written container after removing an element from it works. ... ok
test_pop_linked_group (tests.unit.test_io_hdf5_h5tools.TestExport.test_pop_linked_group)
Test that exporting a written container after removing a linked element from it works. ... ok
test_soft_link_dataset (tests.unit.test_io_hdf5_h5tools.TestExport.test_soft_link_dataset)
Test that exporting a written file with soft linked datasets keeps links within the file. ... ok
test_soft_link_group (tests.unit.test_io_hdf5_h5tools.TestExport.test_soft_link_group)
Test that exporting a written file with soft linked groups keeps links within the file. ... ok
test_with_new_id (tests.unit.test_io_hdf5_h5tools.TestExport.test_with_new_id)
Test that exporting with a src_io without a manager raises an error. ... ok
test_wrong_mode (tests.unit.test_io_hdf5_h5tools.TestExport.test_wrong_mode)
Test that exporting with a src_io without a manager raises an error. ... ok
test_get_namespaces_different_versions (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_different_versions)
Test getting namespaces with multiple versions given a path. ... ok
test_get_namespaces_multiple_namespaces (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_multiple_namespaces)
Test getting multiple namespaces given a path. ... ok
test_get_namespaces_no_specloc (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_no_specloc)
Test getting namespaces where the file does not contain a SPEC_LOC_ATTR. ... ok
test_get_namespaces_none_and_other_version (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_none_and_other_version)
Test getting namespaces file has a namespace with a normal version and an 'None" version. ... ok
test_get_namespaces_none_version (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_none_version)
Test getting namespaces where file has one None-versioned namespace. ... ok
test_get_namespaces_unversioned (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_unversioned)
Test getting namespaces where file has one unversioned namespace. ... ok
test_get_namespaces_unversioned_and_other (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_unversioned_and_other)
Test getting namespaces file has a namespace with a normal version and an 'unversioned" version. ... ok
test_get_namespaces_with_file (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_with_file)
Test getting namespaces given a file object. ... ok
test_get_namespaces_with_path (tests.unit.test_io_hdf5_h5tools.TestGetNamespaces.test_get_namespaces_with_path)
Test getting namespaces given a path. ... ok
test_constructor (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_constructor) ... ok
test_delete_with_incomplete_construction_missing_file (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_delete_with_incomplete_construction_missing_file)
Here we test what happens when `close` is called before `HDF5IO.__init__` has ... ok
test_delete_with_incomplete_construction_missing_open_files (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_delete_with_incomplete_construction_missing_open_files)
Here we test what happens when `close` is called before `HDF5IO.__init__` has ... ok
test_path_or_file (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_path_or_file) ... ok
test_pathlib_path (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_pathlib_path) ... ok
test_set_file_mismatch (tests.unit.test_io_hdf5_h5tools.TestHDF5IO.test_set_file_mismatch) ... ok
test_link_data_false (tests.unit.test_io_hdf5_h5tools.TestLinkData.test_link_data_false)
Test that the argument link_data=False for write_builder copies the data. ... ok
test_link_data_true (tests.unit.test_io_hdf5_h5tools.TestLinkData.test_link_data_true)
Test that the argument link_data=True for write_builder creates an external link. ... ok
test_load_namespaces_file_no_path (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_file_no_path)
Test that loading namespaces from an h5py.File not backed by a file on disk is OK and does not close the file. ... ok
test_load_namespaces_file_path_matched (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_file_path_matched)
Test that loading namespaces given an h5py.File and path is OK and does not close the file. ... ok
test_load_namespaces_file_path_mismatched (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_file_path_mismatched)
Test that loading namespaces given an h5py.File and path that are mismatched raises an error. ... ok
test_load_namespaces_no_path_no_file (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_no_path_no_file)
Test that loading namespaces without a path or file raises an error. ... ok
test_load_namespaces_no_specloc (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_no_specloc)
Test loading namespaces where the file does not contain a SPEC_LOC_ATTR. ... ok
test_load_namespaces_none_version (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_none_version)
Test that reading a file with a cached namespace and None version works but raises a warning. ... ok
test_load_namespaces_path (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_path)
Test that loading namespaces given a path is OK and returns the correct dictionary. ... ok
test_load_namespaces_resolve_custom_deps (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_resolve_custom_deps)
Test that reading a file with a cached namespace and different def/inc keys works. ... ok
test_load_namespaces_unversioned (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_unversioned)
Test that reading a file with a cached, unversioned version works but raises a warning. ... ok
test_load_namespaces_with_dependencies (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_with_dependencies)
Test loading namespaces where one includes another. ... ok
test_load_namespaces_with_pathlib_path (tests.unit.test_io_hdf5_h5tools.TestLoadNamespaces.test_load_namespaces_with_pathlib_path)
Test that loading a namespace using a valid pathlib Path is OK and returns the correct dictionary. ... ok
test_double_append_new_manager (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_double_append_new_manager)
Test writing to a container in append mode twice using a new manager without changing the container. ... skipped 'Functionality not yet supported'
test_double_append_same_manager (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_double_append_same_manager)
Test writing to a container in append mode twice using the same manager without changing the container. ... skipped 'Functionality not yet supported'
test_double_write_new_manager (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_double_write_new_manager)
Test writing to a container in write mode twice using a new manager without changing the container. ... ok
test_double_write_same_manager (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_double_write_same_manager)
Test writing to a container in write mode twice using the same manager without changing the container. ... ok
test_write_add_append_bucket (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_write_add_append_bucket)
Test appending a container to a file. ... ok
test_write_add_append_double_write (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_write_add_append_double_write)
Test using the same IO object to append a container to a file twice. ... ok
test_write_add_write (tests.unit.test_io_hdf5_h5tools.TestMultiWrite.test_write_add_write)
Test writing a container, adding to the in-memory container, then overwriting the same file. ... ok
test_no_cache_spec (tests.unit.test_io_hdf5_h5tools.TestNoCacheSpec.test_no_cache_spec) ... ok
test_broken_link (tests.unit.test_io_hdf5_h5tools.TestReadLink.test_broken_link)
Test that opening a file with a broken link raises a warning but is still readable. ... ok
test_broken_linked_data (tests.unit.test_io_hdf5_h5tools.TestReadLink.test_broken_linked_data)
Test that opening a file with a broken link raises a warning but is still readable. ... ok
test_link_to_link (tests.unit.test_io_hdf5_h5tools.TestReadLink.test_link_to_link)
Test that link to link gets written and read properly ... ok
test_set_link_loc (tests.unit.test_io_hdf5_h5tools.TestReadLink.test_set_link_loc)
Test that Builder location is set when it is read as a link ... ok
test_roundtrip_basic (tests.unit.test_io_hdf5_h5tools.TestRoundTrip.test_roundtrip_basic) ... ok
test_roundtrip_empty_dataset (tests.unit.test_io_hdf5_h5tools.TestRoundTrip.test_roundtrip_empty_dataset) ... ok
test_roundtrip_empty_group (tests.unit.test_io_hdf5_h5tools.TestRoundTrip.test_roundtrip_empty_group) ... ok
test_roundtrip_pathlib_path (tests.unit.test_io_hdf5_h5tools.TestRoundTrip.test_roundtrip_pathlib_path) ... ok
test_roundtrip_basic (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_roundtrip_basic) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_roundtrip_empty_dataset (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_roundtrip_empty_dataset) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_write_zarr_dataset_compress_gzip (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_write_zarr_dataset_compress_gzip) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_write_zarr_float32_dataset (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_write_zarr_float32_dataset) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_write_zarr_int32_dataset (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_write_zarr_int32_dataset) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_write_zarr_string_dataset (tests.unit.test_io_hdf5_h5tools.TestWriteHDF5withZarrInput.test_write_zarr_string_dataset) ... skipped 'Skipping TestRoundTripHDF5withZarrInput because Zarr is not installed'
test_set_written_on_write (tests.unit.test_io_hdf5_h5tools.TestWritten.test_set_written_on_write)
Test that write_builder changes the written flag of the builder and its children from False to True. ... ok
test_create_multiple_types (tests.unit.test_multicontainerinterface.TestBadClsConf.test_create_multiple_types)
Test that an error is raised if __clsconf__ specifies 'create' key with multiple types. ... ok
test_create_multiple_types_multi (tests.unit.test_multicontainerinterface.TestBadClsConf.test_create_multiple_types_multi)
Test that an error is raised if one item of a __clsconf__ list specifies 'create' key with multiple types. ... ok
test_missing_add (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_add)
Test that an error is raised if __clsconf__ is missing the add key. ... ok
test_missing_add_multi (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_add_multi)
Test that an error is raised if one item of a __clsconf__ list is missing the add key. ... ok
test_missing_attr (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_attr)
Test that an error is raised if __clsconf__ is missing the attr key. ... ok
test_missing_attr_multi (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_attr_multi)
Test that an error is raised if one item of a __clsconf__ list is missing the attr key. ... ok
test_missing_type (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_type)
Test that an error is raised if __clsconf__ is missing the type key. ... ok
test_missing_type_multi (tests.unit.test_multicontainerinterface.TestBadClsConf.test_missing_type_multi)
Test that an error is raised if one item of a __clsconf__ list is missing the type key. ... ok
test_wrong_type (tests.unit.test_multicontainerinterface.TestBadClsConf.test_wrong_type)
Test that an error is raised if __clsconf__ is missing the add key. ... ok
test_add_dict (tests.unit.test_multicontainerinterface.TestBasic.test_add_dict)
Test that adding a dict to the attribute dict correctly adds the input dict values. ... ok
test_add_docval (tests.unit.test_multicontainerinterface.TestBasic.test_add_docval)
Test that the docval for the add method is set correctly. ... ok
test_add_list (tests.unit.test_multicontainerinterface.TestBasic.test_add_list)
Test that adding a list to the attribute dict correctly adds the items. ... ok
test_add_single (tests.unit.test_multicontainerinterface.TestBasic.test_add_single)
Test that adding a container to the attribute dict correctly adds the container. ... ok
test_add_single_dup (tests.unit.test_multicontainerinterface.TestBasic.test_add_single_dup)
Test that adding a container to the attribute dict correctly adds the container. ... ok
test_add_single_modified (tests.unit.test_multicontainerinterface.TestBasic.test_add_single_modified)
Test that adding a container to the attribute dict correctly makes the MCI as modified. ... ok
test_add_single_not_parent (tests.unit.test_multicontainerinterface.TestBasic.test_add_single_not_parent)
Test that adding a container with a parent to the attribute dict correctly adds the container. ... ok
test_add_single_not_parent_modified (tests.unit.test_multicontainerinterface.TestBasic.test_add_single_not_parent_modified)
Test that adding a container with a parent to the attribute dict correctly marks the MCI as modified. ... ok
test_attr_getter (tests.unit.test_multicontainerinterface.TestBasic.test_attr_getter)
Test that the getter for the attribute dict returns a LabelledDict. ... ok
test_attr_property (tests.unit.test_multicontainerinterface.TestBasic.test_attr_property)
Test that a property is created for the attribute. ... ok
test_attr_setter_none (tests.unit.test_multicontainerinterface.TestBasic.test_attr_setter_none)
Test that setting the attribute dict to None does not alter the dict. ... ok
test_create_docval (tests.unit.test_multicontainerinterface.TestBasic.test_create_docval)
Test that the docval for the create method is set correctly. ... ok
test_getitem (tests.unit.test_multicontainerinterface.TestBasic.test_getitem)
Test that getitem works. ... ok
test_getitem_docval (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_docval)
Test that the docval for __getitem__ is set correctly. ... ok
test_getitem_empty (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_empty)
Test that an error is raised if the attribute dict is empty and no name is given to getitem. ... ok
test_getitem_multiconf (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_multiconf)
Test that classes with multiple attribute configurations cannot use getitem. ... ok
test_getitem_multiple (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_multiple)
Test that an error is raised if the attribute dict has multiple values and no name is given to getitem. ... ok
test_getitem_not_found (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_not_found)
Test that a KeyError is raised if the key is not found using getitem. ... ok
test_getitem_single_none (tests.unit.test_multicontainerinterface.TestBasic.test_getitem_single_none)
Test that getitem works wwhen there is a single item and no name is given to getitem. ... ok
test_getter_docval (tests.unit.test_multicontainerinterface.TestBasic.test_getter_docval)
Test that the docval for the get method is set correctly. ... ok
test_getter_empty (tests.unit.test_multicontainerinterface.TestBasic.test_getter_empty)
Test that calling the getter with no args and no items in the attribute dict raises an error. ... ok
test_getter_name (tests.unit.test_multicontainerinterface.TestBasic.test_getter_name)
Test that calling the getter with a correct key works. ... ok
test_getter_name_not_found (tests.unit.test_multicontainerinterface.TestBasic.test_getter_name_not_found)
Test that calling the getter with a key not in the attribute dict raises a KeyError. ... ok
test_getter_none (tests.unit.test_multicontainerinterface.TestBasic.test_getter_none)
Test that calling the getter with no args and one item in the attribute returns the item. ... ok
test_getter_none_multiple (tests.unit.test_multicontainerinterface.TestBasic.test_getter_none_multiple)
Test that calling the getter with no args and multiple items in the attribute dict raises an error. ... ok
test_init_custom_name (tests.unit.test_multicontainerinterface.TestBasic.test_init_custom_name)
Test that initializing the MCI with a custom name works. ... ok
test_init_docval (tests.unit.test_multicontainerinterface.TestBasic.test_init_docval)
Test that the docval for the __init__ method is set correctly. ... ok
test_init_empty (tests.unit.test_multicontainerinterface.TestBasic.test_init_empty)
Test that initializing the MCI with no arguments initializes the attribute dict empty. ... ok
test_init_multi (tests.unit.test_multicontainerinterface.TestBasic.test_init_multi)
Test that initializing the MCI with no arguments initializes the attribute dict empty. ... ok
test_remove_child (tests.unit.test_multicontainerinterface.TestBasic.test_remove_child)
Test that removing a child container from the attribute dict resets the parent to None. ... ok
test_remove_non_child (tests.unit.test_multicontainerinterface.TestBasic.test_remove_non_child)
Test that removing a non-child container from the attribute dict resets the parent to None. ... ok
test_init_no_cls_conf (tests.unit.test_multicontainerinterface.TestNoClsConf.test_init_no_cls_conf)
Test that defining an MCI subclass without __clsconf__ raises an error. ... ok
test_init_superclass_no_cls_conf (tests.unit.test_multicontainerinterface.TestNoClsConf.test_init_superclass_no_cls_conf)
Test that a subclass of an MCI class without a __clsconf__ can be initialized. ... ok
test_mci_init (tests.unit.test_multicontainerinterface.TestNoClsConf.test_mci_init)
Test that MultiContainerInterface cannot be instantiated. ... ok
test_override_init (tests.unit.test_multicontainerinterface.TestOverrideInit.test_override_init)
Test that overriding __init__ works. ... ok
test_override_property (tests.unit.test_multicontainerinterface.TestOverrideInit.test_override_property)
Test that overriding the attribute property works. ... ok
test___eq__ (tests.unit.test_query.LinspaceQueryTest.test___eq__)
Test wrapper equals magic method ... ok
test___ge__ (tests.unit.test_query.LinspaceQueryTest.test___ge__)
Test wrapper greater than or equal magic method ... ok
test___getitem__ (tests.unit.test_query.LinspaceQueryTest.test___getitem__)
Test wrapper getitem using slice ... ok
test___getitem__query (tests.unit.test_query.LinspaceQueryTest.test___getitem__query)
Test wrapper getitem using query ... ok
test___gt__ (tests.unit.test_query.LinspaceQueryTest.test___gt__)
Test wrapper greater than magic method ... ok
test___le__ (tests.unit.test_query.LinspaceQueryTest.test___le__)
Test wrapper less than or equal magic method ... ok
test___lt__ (tests.unit.test_query.LinspaceQueryTest.test___lt__)
Test wrapper less than magic method ... ok
test___ne__ (tests.unit.test_query.LinspaceQueryTest.test___ne__)
Test wrapper not equal magic method ... ok
test_get_dataset (tests.unit.test_query.LinspaceQueryTest.test_get_dataset) ... ok
test___eq__ (tests.unit.test_query.SortedQueryTest.test___eq__)
Test wrapper equals magic method ... ok
test___ge__ (tests.unit.test_query.SortedQueryTest.test___ge__)
Test wrapper greater than or equal magic method ... ok
test___getitem__ (tests.unit.test_query.SortedQueryTest.test___getitem__)
Test wrapper getitem using slice ... ok
test___getitem__query (tests.unit.test_query.SortedQueryTest.test___getitem__query)
Test wrapper getitem using query ... ok
test___gt__ (tests.unit.test_query.SortedQueryTest.test___gt__)
Test wrapper greater than magic method ... ok
test___le__ (tests.unit.test_query.SortedQueryTest.test___le__)
Test wrapper less than or equal magic method ... ok
test___lt__ (tests.unit.test_query.SortedQueryTest.test___lt__)
Test wrapper less than magic method ... ok
test___ne__ (tests.unit.test_query.SortedQueryTest.test___ne__)
Test wrapper not equal magic method ... ok
test_get_dataset (tests.unit.test_query.SortedQueryTest.test_get_dataset) ... ok
test___str__ (tests.unit.test_table.TestRow.test___str__) ... ok
test_add_row_getitem (tests.unit.test_table.TestRow.test_add_row_getitem) ... ok
test_init (tests.unit.test_table.TestRow.test_init) ... ok
test_row_no_table (tests.unit.test_table.TestRow.test_row_no_table) ... ok
test_table_init (tests.unit.test_table.TestRow.test_table_init) ... ok
test_todict (tests.unit.test_table.TestRow.test_todict) ... ok
test_add_row_getitem (tests.unit.test_table.TestTable.test_add_row_getitem) ... ok
test_from_dataframe (tests.unit.test_table.TestTable.test_from_dataframe) ... ok
test_init (tests.unit.test_table.TestTable.test_init) ... ok
test_to_dataframe (tests.unit.test_table.TestTable.test_to_dataframe) ... ok
test_datachunk_astype (tests.unit.utils_test.test_core_DataChunk.DataChunkTests.test_datachunk_astype) ... ok
test_datachunk_copy (tests.unit.utils_test.test_core_DataChunk.DataChunkTests.test_datachunk_copy) ... ok
test_datachunk_deepcopy (tests.unit.utils_test.test_core_DataChunk.DataChunkTests.test_datachunk_deepcopy) ... ok
test_custom_iter_first_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_custom_iter_first_axis) ... ok
test_custom_iter_last_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_custom_iter_last_axis) ... ok
test_custom_iter_middle_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_custom_iter_middle_axis) ... ok
test_custom_iter_mismatched_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_custom_iter_mismatched_axis) ... ok
test_dtype (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_dtype) ... ok
test_list_none (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_list_none)
Test that DataChunkIterator has no dtype or chunks when given a list of None. ... ok
test_list_none_dtype (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_list_none_dtype)
Test that DataChunkIterator has the passed-in dtype and no chunks when given a list of None. ... ok
test_list_numpy_scalar (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_list_numpy_scalar) ... ok
test_list_scalar (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_list_scalar) ... ok
test_maxshape (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_maxshape) ... ok
test_multidimensional_list_first_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_multidimensional_list_first_axis)
Test DataChunkIterator with multidimensional list data, no buffering, and iterating on the first dimension. ... ok
test_multidimensional_list_last_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_multidimensional_list_last_axis)
Test DataChunkIterator with multidimensional list data, no buffering, and iterating on the last dimension. ... ok
test_multidimensional_list_middle_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_multidimensional_list_middle_axis)
Test DataChunkIterator with multidimensional list data, no buffering, and iterating on a middle dimension. ... ok
test_none_iter (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_none_iter)
Test that DataChunkIterator __init__ sets defaults correctly and all chunks and recommended shapes are None. ... ok
test_numpy_iter_buffered_first_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_buffered_first_axis)
Test DataChunkIterator with numpy data, buffering, and iterating on the first dimension. ... ok
test_numpy_iter_buffered_last_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_buffered_last_axis)
Test DataChunkIterator with numpy data, buffering, and iterating on the last dimension. ... ok
test_numpy_iter_buffered_middle_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_buffered_middle_axis)
Test DataChunkIterator with numpy data, buffering, and iterating on a middle dimension. ... ok
test_numpy_iter_unbuffered_first_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_unbuffered_first_axis)
Test DataChunkIterator with numpy data, no buffering, and iterating on the first dimension. ... ok
test_numpy_iter_unbuffered_last_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_unbuffered_last_axis)
Test DataChunkIterator with numpy data, no buffering, and iterating on the last dimension. ... ok
test_numpy_iter_unbuffered_middle_axis (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_unbuffered_middle_axis)
Test DataChunkIterator with numpy data, no buffering, and iterating on a middle dimension. ... ok
test_numpy_iter_unmatched_buffer_size (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_numpy_iter_unmatched_buffer_size) ... ok
test_set_maxshape (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_set_maxshape) ... ok
test_sparse_data_buffer_aligned (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_sparse_data_buffer_aligned) ... ok
test_sparse_data_buffer_notaligned (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_sparse_data_buffer_notaligned) ... ok
test_standard_iterator_unbuffered (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_standard_iterator_unbuffered) ... ok
test_standard_iterator_unmatched_buffersized (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_standard_iterator_unmatched_buffersized) ... ok
test_start_with_none (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkIteratorTests.test_start_with_none) ... ok
test_astype (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkTests.test_astype) ... ok
test_dtype (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkTests.test_dtype) ... ok
test_len_operator_no_data (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkTests.test_len_operator_no_data) ... ok
test_len_operator_with_data (tests.unit.utils_test.test_core_DataChunkIterator.DataChunkTests.test_len_operator_with_data) ... ok
test_copy (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_copy) ... ok
test_dataio_options (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_dataio_options)
Test that either data or dtype+shape are specified exclusively ... ok
test_dataio_slice_delegation (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_dataio_slice_delegation) ... ok
test_deepcopy (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_deepcopy) ... ok
test_set_dataio (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_set_dataio)
Test that Data.set_dataio works as intended ... ok
test_set_dataio_data_already_set (tests.unit.utils_test.test_core_DataIO.DataIOTests.test_set_dataio_data_already_set)
Test that Data.set_dataio works as intended ... ok
test_abstract_assertions (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_abstract_assertions) ... ok
test_automated_buffer_shape_attribute_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_automated_buffer_shape_attribute_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_automated_chunk_shape_attribute_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_automated_chunk_shape_attribute_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_buffer_gb_option (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_buffer_gb_option) ... ok
test_buffer_option_assertion_exceed_maxshape (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_buffer_option_assertion_exceed_maxshape) ... ok
test_buffer_option_assertion_negative_buffer_gb (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_buffer_option_assertion_negative_buffer_gb) ... ok
test_buffer_option_assertion_negative_shape (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_buffer_option_assertion_negative_shape) ... ok
test_buffer_shape_option (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_buffer_shape_option) ... ok
test_chunk_mb_option (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_mb_option) ... ok
test_chunk_mb_option_larger_than_total_size (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_mb_option_larger_than_total_size)
Chunk is larger than total data size; should collapse to maxshape. ... ok
test_chunk_mb_option_while_condition (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_mb_option_while_condition)
Test to evoke while condition of default shaping method. ... ok
test_chunk_mb_option_while_condition_unit_maxshape_axis (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_mb_option_while_condition_unit_maxshape_axis)
Test to evoke while condition of default shaping method. ... ok
test_chunk_option_assertion_negative_chunk_mb (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_option_assertion_negative_chunk_mb) ... ok
test_chunk_option_assertion_negative_shape (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_option_assertion_negative_shape) ... ok
test_chunk_shape_option (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_chunk_shape_option) ... ok
test_joint_option_assertions (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_joint_option_assertions) ... ok
test_manual_buffer_shape_attribute_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_manual_buffer_shape_attribute_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_manual_chunk_shape_attribute_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_manual_chunk_shape_attribute_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_maxshape_attribute_contains_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_maxshape_attribute_contains_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_np_dtype_maxshape_attribute_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_np_dtype_maxshape_attribute_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_num_buffers (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_num_buffers) ... ok
test_numpy_array_chunk_iterator (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_numpy_array_chunk_iterator) ... ok
test_progress_bar (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_progress_bar) ... skipped 'optional tqdm module is not installed'
test_progress_bar_assertion (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_progress_bar_assertion) ... skipped 'optional tqdm module is not installed'
test_progress_bar_no_options (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_progress_bar_no_options) ... skipped 'optional tqdm module is installed'
test_selection_slices_int_type (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_selection_slices_int_type)
Motivated by issues described in https://github.com/hdmf-dev/hdmf/pull/780 & 781 regarding return types. ... ok
test_tqdm_not_installed (tests.unit.utils_test.test_core_GenericDataChunkIterator.GenericDataChunkIteratorTests.test_tqdm_not_installed) ... ok
test_default_message (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorResultTests.test_default_message) ... ok
test_ensure_use_of_tuples_during_asignment (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorResultTests.test_ensure_use_of_tuples_during_asignment) ... ok
test_set_error_to_illegal_type (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorResultTests.test_set_error_to_illegal_type) ... ok
test_DataChunkIterator_error_on_undetermined_axis (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_DataChunkIterator_error_on_undetermined_axis) ... ok
test_DataChunkIterator_ignore_undetermined_axis (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_DataChunkIterator_ignore_undetermined_axis) ... ok
test_DataChunkIterators_match (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_DataChunkIterators_match) ... ok
test_DynamicTableRegion_shape_validation (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_DynamicTableRegion_shape_validation) ... ok
test_array_all_dimensions_match (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_all_dimensions_match) ... ok
test_array_axis_index_out_of_bounds_mutilple_axis (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_axis_index_out_of_bounds_mutilple_axis) ... ok
test_array_axis_index_out_of_bounds_single_axis (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_axis_index_out_of_bounds_single_axis) ... ok
test_array_dimensions_mismatch (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_dimensions_mismatch) ... ok
test_array_unequal_number_of_axes_for_comparison (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_unequal_number_of_axes_for_comparison) ... ok
test_array_unequal_number_of_dimensions (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_unequal_number_of_dimensions) ... ok
test_array_unequal_number_of_dimensions_check_multiple_axesy (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_unequal_number_of_dimensions_check_multiple_axesy) ... ok
test_array_unequal_number_of_dimensions_check_one_axis_only (tests.unit.utils_test.test_core_ShapeValidator.ShapeValidatorTests.test_array_unequal_number_of_dimensions_check_one_axis_only) ... ok
test_allow_none (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_none)
Test that docval with allow_none=True and non-None default value works ... ok
test_allow_none_false (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_none_false)
Test that docval with allow_none=True and non-None default value works ... ok
test_allow_none_no_default (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_none_no_default)
Test that docval with allow_none=True and no default raises an error ... ok
test_allow_none_redundant (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_none_redundant)
Test that docval with allow_none=True and default=None works ... ok
test_allow_positional_error (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_positional_error) ... ok
test_allow_positional_warn (tests.unit.utils_test.test_docval.TestDocValidator.test_allow_positional_warn) ... ok
test_bad_shape (tests.unit.utils_test.test_docval.TestDocValidator.test_bad_shape) ... ok
test_bad_type (tests.unit.utils_test.test_docval.TestDocValidator.test_bad_type) ... ok
test_bool_string_type (tests.unit.utils_test.test_docval.TestDocValidator.test_bool_string_type) ... ok
test_bool_type (tests.unit.utils_test.test_docval.TestDocValidator.test_bool_type) ... ok
test_call_docval_func (tests.unit.utils_test.test_docval.TestDocValidator.test_call_docval_func)
Test that call_docval_func strips extra args and calls the function. ... ok
test_catch_dup_names (tests.unit.utils_test.test_docval.TestDocValidator.test_catch_dup_names)
Test that docval does not allow duplicate argument names ... ok
test_docval_add (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add)
Test that docval works with a single positional ... ok
test_docval_add2 (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2)
Test that docval works with two positional ... ok
test_docval_add2_kw_all_kw_syntax (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_all_kw_syntax)
Test that docval works with two positional ... ok
test_docval_add2_kw_default (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_default)
Test that docval works with two positional ... ok
test_docval_add2_kw_default_sub (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_default_sub)
Test that docval works with a four positional arguments and ... ok
test_docval_add2_kw_default_sub_missing_args (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_default_sub_missing_args)
Test that docval catches missing arguments with a four positional arguments ... ok
test_docval_add2_kw_kw_syntax (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_kw_syntax)
Test that docval works with two positional ... ok
test_docval_add2_kw_kwsyntax_sub (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_kwsyntax_sub)
Test that docval works when called with a four positional ... ok
test_docval_add2_kw_kwsyntax_sub_missing_args (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_kwsyntax_sub_missing_args)
Test that docval catches missing arguments when called with a four positional ... ok
test_docval_add2_kw_kwsyntax_sub_nonetype_arg (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_kwsyntax_sub_nonetype_arg)
Test that docval catches NoneType when called with a four positional ... ok
test_docval_add2_kw_pos_syntax (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_pos_syntax)
Test that docval works with two positional ... ok
test_docval_add2_kw_pos_syntax_missing_args (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_kw_pos_syntax_missing_args)
Test that docval catches incorrect type with two positional ... ok
test_docval_add2_pos_as_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_pos_as_kw)
Test that docval works with two positional ... ok
test_docval_add2_w_unicode (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add2_w_unicode)
Test that docval works with two positional ... ok
test_docval_add_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add_kw)
Test that docval works with a single positional ... ok
test_docval_add_missing_args (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add_missing_args)
Test that docval catches missing argument ... ok
test_docval_add_sub (tests.unit.utils_test.test_docval.TestDocValidator.test_docval_add_sub)
Test that docval works with a two positional arguments, ... ok
test_dup_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_dup_kw)
Test that docval raises an error if a keyword argument ... ok
test_enum_bad_type (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_bad_type)
Test that docval with an enum check where the arg type includes an invalid enum type fails ... ok
test_enum_bool_mixed (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_bool_mixed)
Test that the basic usage of an enum check on a tuple of bool, int, float, and string works ... ok
test_enum_float (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_float)
Test that the basic usage of an enum check on floats works ... ok
test_enum_forbidden_values (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_forbidden_values)
Test that docval with enum values that include a forbidden type fails ... ok
test_enum_int (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_int)
Test that the basic usage of an enum check on ints works ... ok
test_enum_none_type (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_none_type)
Test that the basic usage of an enum check on None works ... ok
test_enum_single_allowed (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_single_allowed)
Test that docval with an enum check on a single value fails ... ok
test_enum_str (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_str)
Test that the basic usage of an enum check on strings works ... ok
test_enum_str_default (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_str_default)
Test that docval with an enum check on strings and a default value works ... ok
test_enum_str_none_default (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_str_none_default)
Test that docval with an enum check on strings and a None default value works ... ok
test_enum_uint (tests.unit.utils_test.test_docval.TestDocValidator.test_enum_uint)
Test that the basic usage of an enum check on uints works ... ok
test_extra_args_dup_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_args_dup_kw)
Test that docval raises an error if a keyword argument ... ok
test_extra_args_pos_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_args_pos_kw)
Test that docval raises an error if too many positional ... ok
test_extra_args_pos_kw_ok (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_args_pos_kw_ok)
Test that docval does not raise an error if too many ... ok
test_extra_args_pos_only (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_args_pos_only)
Test that docval raises an error if too many positional ... ok
test_extra_args_pos_only_ok (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_args_pos_only_ok)
Test that docval raises an error if too many positional ... ok
test_extra_kwarg (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_kwarg)
Test that docval parses arguments when only keyword ... ok
test_extra_kwargs_pos_kw (tests.unit.utils_test.test_docval.TestDocValidator.test_extra_kwargs_pos_kw)
Test that docval raises an error if extra keyword ... ok
test_fmt_docval_args (tests.unit.utils_test.test_docval.TestDocValidator.test_fmt_docval_args)
Test that fmt_docval_args parses the args and strips extra args ... ok
test_fmt_docval_args_allow_extra (tests.unit.utils_test.test_docval.TestDocValidator.test_fmt_docval_args_allow_extra)
Test that fmt_docval_args works ... ok
test_fmt_docval_args_no_docval (tests.unit.utils_test.test_docval.TestDocValidator.test_fmt_docval_args_no_docval)
Test that fmt_docval_args raises an error when run on function without docval ... ok
test_get_docval_all (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_all)
Test that get_docval returns a tuple of the docval arguments ... ok
test_get_docval_missing_arg (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_missing_arg)
Test that get_docval throws error if the matching docval argument is not found ... ok
test_get_docval_missing_arg_of_many_ok (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_missing_arg_of_many_ok)
Test that get_docval throws error if the matching docval arguments is not found ... ok
test_get_docval_missing_args (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_missing_args)
Test that get_docval throws error if the matching docval arguments is not found ... ok
test_get_docval_none (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_none)
Test that get_docval returns an empty tuple if there is no docval ... ok
test_get_docval_none_arg (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_none_arg)
Test that get_docval throws error if there is no docval and an argument name is passed ... ok
test_get_docval_one_arg (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_one_arg)
Test that get_docval returns the matching docval argument ... ok
test_get_docval_two_args (tests.unit.utils_test.test_docval.TestDocValidator.test_get_docval_two_args)
Test that get_docval returns the matching docval arguments in order ... ok
test_multi_shape (tests.unit.utils_test.test_docval.TestDocValidator.test_multi_shape) ... ok
test_only_kw_arg1_arg2 (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_arg1_arg2)
Test that docval parses arguments when only keyword ... ok
test_only_kw_arg1_arg2_pos (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_arg1_arg2_pos)
Test that docval parses arguments when only keyword ... ok
test_only_kw_arg1_no_arg2 (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_arg1_no_arg2)
Test that docval parses arguments when only keyword ... ok
test_only_kw_arg1_pos_no_arg2 (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_arg1_pos_no_arg2)
Test that docval parses arguments when only keyword ... ok
test_only_kw_arg2_no_arg1 (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_arg2_no_arg1)
Test that docval parses arguments when only keyword ... ok
test_only_kw_no_args (tests.unit.utils_test.test_docval.TestDocValidator.test_only_kw_no_args)
Test that docval parses arguments when only keyword ... ok
test_uint_string_type (tests.unit.utils_test.test_docval.TestDocValidator.test_uint_string_type)
Test that docval type specification of string 'uint' matches np.uint of all available precisions. ... ok
test_uint_type (tests.unit.utils_test.test_docval.TestDocValidator.test_uint_type)
Test that docval type specification of np.uint32 works as expected. ... ok
test_unsupported_docval_term (tests.unit.utils_test.test_docval.TestDocValidator.test_unsupported_docval_term)
Test that docval does not allow setting of arguments ... ok
test_shape_invalid_unpack (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_invalid_unpack)
Test that passing an object for an argument with required shape and object.argument has an invalid shape ... ok
test_shape_invalid_unpack_default (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_invalid_unpack_default)
Test that passing an object for an argument with required shape and a default value and object.argument has ... ok
test_shape_none_unpack (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_none_unpack)
Test that passing an object for an argument with required shape and object.argument is None is OK ... ok
test_shape_none_unpack_default (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_none_unpack_default)
Test that passing an object for an argument with required shape and a default value and object.argument is ... ok
test_shape_other_unpack (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_other_unpack)
Test that passing an object for an argument with required shape and object.argument is an object without ... ok
test_shape_other_unpack_default (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_other_unpack_default)
Test that passing an object for an argument with required shape and a default value and object.argument is ... ok
test_shape_valid_unpack (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_valid_unpack)
Test that passing an object for an argument with required shape tests the shape of object.argument ... ok
test_shape_valid_unpack_default (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_shape_valid_unpack_default)
Test that passing an object for an argument with required shape and a default value tests the shape of ... ok
test_type_arg (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_type_arg)
Test that passing an object for an argument that allows a specific type works ... ok
test_type_arg_wrong_type (tests.unit.utils_test.test_docval.TestDocValidatorChain.test_type_arg_wrong_type)
Test that passing an object for an argument that does not match a specific type raises an error ... ok
test_arg_not_found_many_args (tests.unit.utils_test.test_docval.TestGetargs.test_arg_not_found_many_args) ... ok
test_arg_not_found_one_arg (tests.unit.utils_test.test_docval.TestGetargs.test_arg_not_found_one_arg) ... ok
test_last_arg_not_dict (tests.unit.utils_test.test_docval.TestGetargs.test_last_arg_not_dict) ... ok
test_many_args_get_all (tests.unit.utils_test.test_docval.TestGetargs.test_many_args_get_all) ... ok
test_many_args_get_some (tests.unit.utils_test.test_docval.TestGetargs.test_many_args_get_some) ... ok
test_many_args_reverse (tests.unit.utils_test.test_docval.TestGetargs.test_many_args_reverse) ... ok
test_many_args_unpack (tests.unit.utils_test.test_docval.TestGetargs.test_many_args_unpack) ... ok
test_one_arg_first (tests.unit.utils_test.test_docval.TestGetargs.test_one_arg_first) ... ok
test_one_arg_second (tests.unit.utils_test.test_docval.TestGetargs.test_one_arg_second) ... ok
test_too_few_args (tests.unit.utils_test.test_docval.TestGetargs.test_too_few_args) ... ok
test_macro (tests.unit.utils_test.test_docval.TestMacro.test_macro) ... ok
test_arg_not_found_many_args (tests.unit.utils_test.test_docval.TestPopargs.test_arg_not_found_many_args) ... ok
test_arg_not_found_one_arg (tests.unit.utils_test.test_docval.TestPopargs.test_arg_not_found_one_arg) ... ok
test_last_arg_not_dict (tests.unit.utils_test.test_docval.TestPopargs.test_last_arg_not_dict) ... ok
test_many_args_pop_all (tests.unit.utils_test.test_docval.TestPopargs.test_many_args_pop_all) ... ok
test_many_args_pop_some (tests.unit.utils_test.test_docval.TestPopargs.test_many_args_pop_some) ... ok
test_many_args_reverse (tests.unit.utils_test.test_docval.TestPopargs.test_many_args_reverse) ... ok
test_many_args_unpack (tests.unit.utils_test.test_docval.TestPopargs.test_many_args_unpack) ... ok
test_one_arg_first (tests.unit.utils_test.test_docval.TestPopargs.test_one_arg_first) ... ok
test_one_arg_second (tests.unit.utils_test.test_docval.TestPopargs.test_one_arg_second) ... ok
test_too_few_args (tests.unit.utils_test.test_docval.TestPopargs.test_too_few_args) ... ok
test_arg_not_found_one_arg (tests.unit.utils_test.test_docval.TestPopargsToDict.test_arg_not_found_one_arg) ... ok
test_many_args_pop_all (tests.unit.utils_test.test_docval.TestPopargsToDict.test_many_args_pop_all) ... ok
test_many_args_pop_some (tests.unit.utils_test.test_docval.TestPopargsToDict.test_many_args_pop_some) ... ok
test_one_arg_first (tests.unit.utils_test.test_docval.TestPopargsToDict.test_one_arg_first) ... ok
test_one_arg_second (tests.unit.utils_test.test_docval.TestPopargsToDict.test_one_arg_second) ... ok
test_add_basic (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_add_basic)
Test add method on object with correct key_attr. ... ok
test_add_callable (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_add_callable)
Test that add properly adds the object and calls the add_callable function. ... ok
test_add_value_missing_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_add_value_missing_key)
Test that add raises an error if the value being set does not have the attribute key_attr. ... ok
test_clear_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_clear_callback) ... ok
test_clear_nocallback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_clear_nocallback) ... ok
test_constructor (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_constructor)
Test that constructor sets arguments properly. ... ok
test_constructor_default (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_constructor_default)
Test that constructor sets default key attribute. ... ok
test_delitem_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_delitem_callback) ... ok
test_delitem_nocallback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_delitem_nocallback) ... ok
test_getitem_eqeq_no_key_attr (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_no_key_attr)
Test that dict[key_attr == val] raises an error if key_attr is not given. ... ok
test_getitem_eqeq_no_key_attr_no_val (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_no_key_attr_no_val)
Test that dict[key_attr == val] raises an error if key_attr is not given and val is not given. ... ok
test_getitem_eqeq_no_val (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_no_val)
Test that dict[key_attr == val] raises an error if val is not given. ... ok
test_getitem_eqeq_nonempty (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_nonempty)
Test that dict[key_attr == val] returns the single matching object. ... ok
test_getitem_eqeq_nonempty_key_attr_no_match (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_nonempty_key_attr_no_match)
Test that dict[key_attr == unknown_val] where a matching value is not found raises a KeyError. ... ok
test_getitem_eqeq_nonempty_unknown_attr (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_nonempty_unknown_attr)
Test that dict[unknown_attr == val] where unknown_attr is not a field on the values raises an error. ... ok
test_getitem_eqeq_other_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_other_key)
Test that dict[other_attr == val] where there are no query matches returns an empty set. ... ok
test_getitem_eqeq_unknown_val (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_eqeq_unknown_val)
Test that dict[unknown_attr == val] where there are no query matches returns an empty set. ... ok
test_getitem_nonempty_other_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_nonempty_other_key)
Test that dict[other_key == val] returns a set of matching objects. ... ok
test_getitem_unknown_val (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_getitem_unknown_val)
Test that dict[unknown_key] where the key unknown_key is not in the dict raises an error. ... ok
test_pop_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_pop_callback) ... ok
test_pop_nocallback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_pop_nocallback) ... ok
test_popitem_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_popitem_callback) ... ok
test_popitem_nocallback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_popitem_nocallback) ... ok
test_set_key_attr (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_set_key_attr)
Test that the key attribute cannot be set after initialization. ... ok
test_setdefault_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setdefault_callback) ... ok
test_setitem_callable (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setitem_callable)
Test that setitem properly sets the object and calls the add_callable function. ... ok
test_setitem_getitem_basic (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setitem_getitem_basic)
Test that setitem and getitem properly set and get the object. ... ok
test_setitem_value_duplicate_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setitem_value_duplicate_key)
Test that setitem raises an error if the key already exists in the dict. ... ok
test_setitem_value_inconsistent_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setitem_value_inconsistent_key)
Test that setitem raises an error if the value being set has an inconsistent key. ... ok
test_setitem_value_missing_key (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_setitem_value_missing_key)
Test that setitem raises an error if the value being set does not have the attribute key_attr. ... ok
test_update_callback (tests.unit.utils_test.test_labelleddict.TestLabelledDict.test_update_callback) ... ok
test_arbitrary_iterable_with_len (tests.unit.utils_test.test_utils.TestGetDataShape.test_arbitrary_iterable_with_len)
Test get_data_shape with strict_no_data_load=True on an arbitrary iterable object with __len__. ... ok
test_dataio (tests.unit.utils_test.test_utils.TestGetDataShape.test_dataio)
Test get_data_shape on DataIO of various shapes and maxshape. ... ok
test_dci (tests.unit.utils_test.test_utils.TestGetDataShape.test_dci)
Test get_data_shape on DataChunkIterators of various shapes and maxshape. ... ok
test_h5dataset (tests.unit.utils_test.test_utils.TestGetDataShape.test_h5dataset)
Test get_data_shape on h5py.Datasets of various shapes and maxshape. ... ok
test_list (tests.unit.utils_test.test_utils.TestGetDataShape.test_list)
Test get_data_shape on lists of various shapes. ... ok
test_nparray (tests.unit.utils_test.test_utils.TestGetDataShape.test_nparray)
Test get_data_shape on numpy arrays of various shapes. ... ok
test_other (tests.unit.utils_test.test_utils.TestGetDataShape.test_other)
Test get_data_shape on miscellaneous edge cases. ... ok
test_set (tests.unit.utils_test.test_utils.TestGetDataShape.test_set)
Test get_data_shape on sets, which have __len__ but are not subscriptable. ... ok
test_strict_no_data_load (tests.unit.utils_test.test_utils.TestGetDataShape.test_strict_no_data_load)
Test get_data_shape with strict_no_data_load=True on nested lists/tuples is the same as when it is False. ... ok
test_string (tests.unit.utils_test.test_utils.TestGetDataShape.test_string)
Test get_data_shape on strings and collections of strings. ... ok
test_tuple (tests.unit.utils_test.test_utils.TestGetDataShape.test_tuple)
Test get_data_shape on tuples of various shapes. ... ok
test_list_float (tests.unit.utils_test.test_utils.TestToUintArray.test_list_float) ... ok
test_list_int (tests.unit.utils_test.test_utils.TestToUintArray.test_list_int) ... ok
test_list_int_neg (tests.unit.utils_test.test_utils.TestToUintArray.test_list_int_neg) ... ok
test_ndarray_float (tests.unit.utils_test.test_utils.TestToUintArray.test_ndarray_float) ... ok
test_ndarray_int (tests.unit.utils_test.test_utils.TestToUintArray.test_ndarray_int) ... ok
test_ndarray_int_neg (tests.unit.utils_test.test_utils.TestToUintArray.test_ndarray_int_neg) ... ok
test_ndarray_uint (tests.unit.utils_test.test_utils.TestToUintArray.test_ndarray_uint) ... ok
test_equal_with_no_location (tests.unit.validator_tests.test_errors.TestErrorEquality.test_equal_with_no_location)
Verify that two errors with no location but the same name are equal ... ok
test_equal_with_overlapping_name_when_location_present (tests.unit.validator_tests.test_errors.TestErrorEquality.test_equal_with_overlapping_name_when_location_present)
Verify that two errors with an overlapping name and a location are equal ... ok
test_equality_with_same_field_values (tests.unit.validator_tests.test_errors.TestErrorEquality.test_equality_with_same_field_values)
Verify that two errors with the same field values are equal ... ok
test_not_equal_with_different_location (tests.unit.validator_tests.test_errors.TestErrorEquality.test_not_equal_with_different_location)
Verify that two errors with a different location are not equal ... ok
test_not_equal_with_different_name (tests.unit.validator_tests.test_errors.TestErrorEquality.test_not_equal_with_different_name)
Verify that two errors with a different name are not equal ... ok
test_not_equal_with_different_reason (tests.unit.validator_tests.test_errors.TestErrorEquality.test_not_equal_with_different_reason)
Verify that two errors with a different reason are not equal ... ok
test_not_equal_with_overlapping_name_when_no_location (tests.unit.validator_tests.test_errors.TestErrorEquality.test_not_equal_with_overlapping_name_when_no_location)
Verify that two errors with an overlapping name but no location are ... ok
test_self_equality (tests.unit.validator_tests.test_errors.TestErrorEquality.test_self_equality)
Verify that one error equals itself ... ok
test_empty_list (tests.unit.validator_tests.test_validate.Test1DArrayValidation.test_empty_list)
Test that validator allows an empty list where an array is specified. ... ok
test_empty_nparray (tests.unit.validator_tests.test_validate.Test1DArrayValidation.test_empty_nparray)
Test that validator allows an empty numpy array where an array is specified. ... ok
test_scalar (tests.unit.validator_tests.test_validate.Test1DArrayValidation.test_scalar)
Test that validator does not allow a scalar where an array is specified. ... ok
test_invalid_incorrect_type_get_validator (tests.unit.validator_tests.test_validate.TestBasicSpec.test_invalid_incorrect_type_get_validator) ... ok
test_invalid_incorrect_type_validate (tests.unit.validator_tests.test_validate.TestBasicSpec.test_invalid_incorrect_type_validate) ... ok
test_invalid_missing (tests.unit.validator_tests.test_validate.TestBasicSpec.test_invalid_missing) ... ok
test_valid (tests.unit.validator_tests.test_validate.TestBasicSpec.test_valid) ... ok
test_invalid_isodatetime (tests.unit.validator_tests.test_validate.TestDateTimeInSpec.test_invalid_isodatetime) ... ok
test_invalid_isodatetime_array (tests.unit.validator_tests.test_validate.TestDateTimeInSpec.test_invalid_isodatetime_array) ... ok
test_valid_isodatetime (tests.unit.validator_tests.test_validate.TestDateTimeInSpec.test_valid_isodatetime) ... ok
test_ascii_for_utf8 (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_ascii_for_utf8)
Test that validator allows ASCII data where UTF8 is specified. ... ok
test_bool_for_numeric (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_bool_for_numeric)
Test that validator does not allow bool data where numeric is specified. ... ok
test_int64_for_int8 (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_int64_for_int8)
Test that validator allows int64 data where int8 is specified. ... ok
test_int64_for_numeric (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_int64_for_numeric)
Test that validator allows int64 data where numeric is specified. ... ok
test_int8_for_int64 (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_int8_for_int64)
Test that validator does not allow int8 data where int64 is specified. ... ok
test_np_bool_for_bool (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_np_bool_for_bool)
Test that validator allows np.bool_ data where bool is specified. ... ok
test_utf8_for_ascii (tests.unit.validator_tests.test_validate.TestDtypeValidation.test_utf8_for_ascii)
Test that validator does not allow UTF8 where ASCII is specified. ... ok
test_invalid_missing_req_type (tests.unit.validator_tests.test_validate.TestEmptySpec.test_invalid_missing_req_type) ... ok
test_valid (tests.unit.validator_tests.test_validate.TestEmptySpec.test_valid) ... ok
test_missing_additional_attribute_on_anonymous_data_type_extension (tests.unit.validator_tests.test_validate.TestExtendedIncDataTypes.test_missing_additional_attribute_on_anonymous_data_type_extension)
Verify that a MissingError is returned when a required attribute from an ... ok
test_redundant_attribute_in_spec (tests.unit.validator_tests.test_validate.TestExtendedIncDataTypes.test_redundant_attribute_in_spec)
Test that only one MissingError is returned when an attribute is missing ... ok
test_validate_child_type_against_anonymous_data_type_extension (tests.unit.validator_tests.test_validate.TestExtendedIncDataTypes.test_validate_child_type_against_anonymous_data_type_extension)
Verify that a MissingError is returned when a required attribute from an ... ok
test_error_on_missing_child_dataset (tests.unit.validator_tests.test_validate.TestLinkAndChildMatchingDataType.test_error_on_missing_child_dataset)
Test that a MissingDataType is returned when the child dataset is missing ... ok
test_error_on_missing_group (tests.unit.validator_tests.test_validate.TestLinkAndChildMatchingDataType.test_error_on_missing_group)
Test that a MissingDataType is returned when the child group is missing ... ok
test_error_on_missing_linked_dataset (tests.unit.validator_tests.test_validate.TestLinkAndChildMatchingDataType.test_error_on_missing_linked_dataset)
Test that a MissingDataType is returned when the linked dataset is missing ... ok
test_error_on_missing_linked_group (tests.unit.validator_tests.test_validate.TestLinkAndChildMatchingDataType.test_error_on_missing_linked_group)
Test that a MissingDataType is returned when the linked group is missing ... ok
test_should_not_validate_illegally_linked_objects (tests.unit.validator_tests.test_validate.TestLinkable.test_should_not_validate_illegally_linked_objects)
Test that an illegally linked child dataset is not validated ... ok
test_typed_linkable_dataset_accepts_link (tests.unit.validator_tests.test_validate.TestLinkable.test_typed_linkable_dataset_accepts_link)
Test that the validator accepts a link when the spec has a typed linkable dataset ... ok
test_typed_linkable_group_accepts_link (tests.unit.validator_tests.test_validate.TestLinkable.test_typed_linkable_group_accepts_link)
Test that the validator accepts a link when the spec has a typed linkable group ... ok
test_typed_nonlinkable_dataset_does_not_accept_link (tests.unit.validator_tests.test_validate.TestLinkable.test_typed_nonlinkable_dataset_does_not_accept_link)
Test that the validator returns an IllegalLinkError when the spec has a typed non-linkable dataset ... ok
test_typed_nonlinkable_group_does_not_accept_link (tests.unit.validator_tests.test_validate.TestLinkable.test_typed_nonlinkable_group_does_not_accept_link)
Test that the validator returns an IllegalLinkError when the spec has a typed non-linkable group ... ok
test_untyped_linkable_dataset_accepts_link (tests.unit.validator_tests.test_validate.TestLinkable.test_untyped_linkable_dataset_accepts_link)
Test that the validator accepts a link when the spec has an untyped linkable dataset ... ok
test_untyped_linkable_group_accepts_link (tests.unit.validator_tests.test_validate.TestLinkable.test_untyped_linkable_group_accepts_link)
Test that the validator accepts a link when the spec has an untyped linkable group ... ok
test_untyped_nonlinkable_dataset_does_not_accept_link (tests.unit.validator_tests.test_validate.TestLinkable.test_untyped_nonlinkable_dataset_does_not_accept_link)
Test that the validator returns an IllegalLinkError when the spec has an untyped non-linkable dataset ... ok
test_untyped_nonlinkable_group_does_not_accept_link (tests.unit.validator_tests.test_validate.TestLinkable.test_untyped_nonlinkable_group_does_not_accept_link)
Test that the validator returns an IllegalLinkError when the spec has an untyped non-linkable group ... ok
test_both_levels_of_hierarchy_validated (tests.unit.validator_tests.test_validate.TestMultipleChildrenAtDifferentLevelsOfInheritance.test_both_levels_of_hierarchy_validated)
Test that when both required children at separate levels of ... ok
test_both_levels_of_hierarchy_validated_inverted_order (tests.unit.validator_tests.test_validate.TestMultipleChildrenAtDifferentLevelsOfInheritance.test_both_levels_of_hierarchy_validated_inverted_order)
Test that when both required children at separate levels of ... skipped 'Functionality not yet supported'
test_error_returned_when_child_at_highest_level_missing (tests.unit.validator_tests.test_validate.TestMultipleChildrenAtDifferentLevelsOfInheritance.test_error_returned_when_child_at_highest_level_missing)
Test that a MissingDataType error is returned when the dataset at ... ok
test_error_returned_when_child_at_lowest_level_missing (tests.unit.validator_tests.test_validate.TestMultipleChildrenAtDifferentLevelsOfInheritance.test_error_returned_when_child_at_lowest_level_missing)
Test that a MissingDataType error is returned when the dataset at ... ok
test_missing_first_dataset_should_return_error (tests.unit.validator_tests.test_validate.TestMultipleNamedChildrenOfSameType.test_missing_first_dataset_should_return_error)
Test that the validator returns a MissingDataType error if the first dataset is missing ... ok
test_missing_first_group_should_return_error (tests.unit.validator_tests.test_validate.TestMultipleNamedChildrenOfSameType.test_missing_first_group_should_return_error)
Test that the validator returns a MissingDataType error if the first group is missing ... ok
test_missing_last_dataset_should_return_error (tests.unit.validator_tests.test_validate.TestMultipleNamedChildrenOfSameType.test_missing_last_dataset_should_return_error)
Test that the validator returns a MissingDataType error if the last dataset is missing ... ok
test_missing_last_group_should_return_error (tests.unit.validator_tests.test_validate.TestMultipleNamedChildrenOfSameType.test_missing_last_group_should_return_error)
Test that the validator returns a MissingDataType error if the last group is missing ... ok
test_no_errors_when_all_children_satisfied (tests.unit.validator_tests.test_validate.TestMultipleNamedChildrenOfSameType.test_no_errors_when_all_children_satisfied)
Test that the validator does not return an error if all child specs are satisfied ... ok
test_invalid_missing_named_req_group (tests.unit.validator_tests.test_validate.TestNestedTypes.test_invalid_missing_named_req_group)
Test that a MissingDataType is returned when a required named nested data type is missing. ... ok
test_invalid_missing_unnamed_req_group (tests.unit.validator_tests.test_validate.TestNestedTypes.test_invalid_missing_unnamed_req_group)
Test that a MissingDataType is returned when a required unnamed nested data type is missing. ... ok
test_invalid_wrong_name_req_type (tests.unit.validator_tests.test_validate.TestNestedTypes.test_invalid_wrong_name_req_type)
Test that a MissingDataType is returned when a required nested data type is given the wrong name. ... ok
test_valid (tests.unit.validator_tests.test_validate.TestNestedTypes.test_valid)
Test that no errors are returned when nested data types are correctly built. ... ok
test_valid_wo_opt_attr (tests.unit.validator_tests.test_validate.TestNestedTypes.test_valid_wo_opt_attr)
"Test that no errors are returned when an optional attribute is omitted from a group. ... ok
test_incorrect_fixed_quantity_should_return_incorrect_quantity_error (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_incorrect_fixed_quantity_should_return_incorrect_quantity_error)
Verify that an incorrect quantity of groups/datasets/links should return an IncorrectQuantityError ... ok
test_incorrect_quantity_error_message (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_incorrect_quantity_error_message)
Verify that an IncorrectQuantityError includes the expected information in the message ... ok
test_incorrect_zero_or_one_quantity_should_return_incorrect_quantity_error (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_incorrect_zero_or_one_quantity_should_return_incorrect_quantity_error)
Verify that an incorrect ZERO_OR_ONE quantity of groups/datasets/links should return ... ok
test_missing_fixed_quantity_should_not_return_incorrect_quantity_error (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_missing_fixed_quantity_should_not_return_incorrect_quantity_error)
Verify that missing groups/datasets/links should not return an IncorrectQuantityError ... ok
test_missing_one_or_many_should_not_return_incorrect_quantity_error (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_missing_one_or_many_should_not_return_incorrect_quantity_error)
Verify that missing ONE_OR_MANY groups/datasets/links should not return an IncorrectQuantityError ... ok
test_valid_fixed_quantity (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_valid_fixed_quantity)
"Verify that groups/datasets/links with a correct fixed quantity correctly pass validation ... ok
test_valid_one_or_many (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_valid_one_or_many)
"Verify that groups/datasets/links with ONE_OR_MANY and a valid quantity correctly pass validation ... ok
test_valid_zero_or_many (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_valid_zero_or_many)
"Verify that groups/datasets/links with ZERO_OR_MANY and a valid quantity correctly pass validation ... ok
test_valid_zero_or_one (tests.unit.validator_tests.test_validate.TestQuantityValidation.test_valid_zero_or_one)
"Verify that groups/datasets/links with ZERO_OR_ONE and a valid quantity correctly pass validation ... ok
test_round_trip_validation_of_compound_dtype_with_reference (tests.unit.validator_tests.test_validate.TestReferenceDatasetsRoundTrip.test_round_trip_validation_of_compound_dtype_with_reference)
Verify that a dataset builder containing data with a compound dtype ... ok
test_round_trip_validation_of_reference_dataset_array (tests.unit.validator_tests.test_validate.TestReferenceDatasetsRoundTrip.test_round_trip_validation_of_reference_dataset_array)
Verify that a dataset builder containing an array of references passes ... ok

----------------------------------------------------------------------
Ran 1365 tests in 17.266s

OK (skipped=17, expected failures=1)
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=pybuild
   dh_prep -O--buildsystem=pybuild
   dh_auto_install --destdir=debian/python3-hdmf/ -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/hdmf-3.5.1/debian/python3-hdmf 
found these packages: ['hdmf', 'hdmf.validate', 'hdmf.testing', 'hdmf.spec', 'hdmf.common', 'hdmf.build', 'hdmf.backends', 'hdmf.common.io', 'hdmf.backends.hdf5']
['h5py>=2.10,<4', 'jsonschema>=2.6.0,<5', 'numpy>=1.16,<1.24', 'pandas>=1.0.5,<2', 'ruamel.yaml>=0.16,<1', 'scipy>=1.1,<2', 'setuptools']
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running build
running build_py
UPDATING /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_version.py
set /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_version.py to '3.5.1'
running install_lib
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_version.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/_due.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/_version.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/region.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/data_utils.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/container.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/utils.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/array.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/query.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__pycache__
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__pycache__/utils.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__pycache__/warnings.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__pycache__/errors.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__pycache__/io.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__pycache__
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/__pycache__/h5tools.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/__pycache__/h5_utils.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/h5_utils.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/hdf5/h5tools.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/errors.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/io.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/utils.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/backends/warnings.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/warnings.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/objectmapper.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/manager.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/errors.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/classgenerator.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/builders.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/builders.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/classgenerator.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/errors.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/manager.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/map.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/objectmapper.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/build/warnings.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/hierarchicaltable.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/sparse.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/alignedtable.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/resources.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/table.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/multi.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__pycache__
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/base.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/experimental.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/namespace.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/resources.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/sparse.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hdmf-common-schema/common/table.yaml -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hdmf-common-schema/common
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__pycache__/alignedtable.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__pycache__/resources.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__pycache__/table.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__pycache__/multi.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/alignedtable.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/multi.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/resources.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/io/table.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/alignedtable.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/hierarchicaltable.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/multi.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/resources.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/sparse.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/common/table.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__pycache__/write.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__pycache__/namespace.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__pycache__/spec.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__pycache__/catalog.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/catalog.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/namespace.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/spec.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/spec/write.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/__pycache__/utils.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/__pycache__/testcase.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/testcase.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/utils.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/testing/validate_spec.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate
creating /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/__pycache__/validator.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/__pycache__/errors.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/__pycache__/__init__.cpython-311.pyc -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/__pycache__
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/errors.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/validate/validator.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/__init__.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/_due.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/array.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/container.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/data_utils.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/monitor.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/query.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/region.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
copying /build/hdmf-3.5.1/.pybuild/cpython3_3.11_hdmf/build/hdmf/utils.py -> /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/_version.py to _version.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/h5_utils.py to h5_utils.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/hdf5/h5tools.py to h5tools.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/errors.py to errors.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/io.py to io.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/utils.py to utils.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/backends/warnings.py to warnings.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/builders.py to builders.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/classgenerator.py to classgenerator.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/errors.py to errors.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/manager.py to manager.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/map.py to map.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/objectmapper.py to objectmapper.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/build/warnings.py to warnings.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/alignedtable.py to alignedtable.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/multi.py to multi.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/resources.py to resources.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/io/table.py to table.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/alignedtable.py to alignedtable.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/hierarchicaltable.py to hierarchicaltable.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/multi.py to multi.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/resources.py to resources.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/sparse.py to sparse.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/common/table.py to table.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/catalog.py to catalog.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/namespace.py to namespace.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/spec.py to spec.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/spec/write.py to write.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/testcase.py to testcase.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/utils.py to utils.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/testing/validate_spec.py to validate_spec.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/errors.py to errors.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/validate/validator.py to validator.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/_due.py to _due.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/array.py to array.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/container.py to container.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/data_utils.py to data_utils.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/monitor.py to monitor.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/query.py to query.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/region.py to region.cpython-311.pyc
byte-compiling /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf/utils.py to utils.cpython-311.pyc
running install_egg_info
running egg_info
writing src/hdmf.egg-info/PKG-INFO
writing dependency_links to src/hdmf.egg-info/dependency_links.txt
writing entry points to src/hdmf.egg-info/entry_points.txt
writing requirements to src/hdmf.egg-info/requires.txt
writing top-level names to src/hdmf.egg-info/top_level.txt
reading manifest file 'src/hdmf.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
writing manifest file 'src/hdmf.egg-info/SOURCES.txt'
Copying src/hdmf.egg-info to /build/hdmf-3.5.1/debian/python3-hdmf/usr/lib/python3.11/dist-packages/hdmf-3.5.1.egg-info
Skipping SOURCES.txt
running install_scripts
Installing validate_hdmf_spec script to /build/hdmf-3.5.1/debian/python3-hdmf/usr/bin
   dh_installdocs -O--buildsystem=pybuild
   dh_installchangelogs -O--buildsystem=pybuild
   dh_installman -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
   dh_installsystemduser -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   dh_compress -O--buildsystem=pybuild
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'python3-hdmf' in '../python3-hdmf_3.5.1-1_all.deb'.
 dpkg-genbuildinfo --build=binary -O../hdmf_3.5.1-1_amd64.buildinfo
 dpkg-genchanges --build=binary -O../hdmf_3.5.1-1_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-source: info: using options from hdmf-3.5.1/debian/source/options: --extend-diff-ignore=^src/[^/]+\.egg-info/
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/732994 and its subdirectories
I: Current time: Fri Apr 21 13:04:02 -12 2023
I: pbuilder-time-stamp: 1682125442