I: pbuilder: network access will be disabled during build
I: Current time: Wed May 3 05:28:05 -12 2023
I: pbuilder-time-stamp: 1683134885
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [profnet_1.0.22-8.dsc]
I: copying [./profnet_1.0.22.orig.tar.gz]
I: copying [./profnet_1.0.22-8.debian.tar.xz]
I: Extracting source
gpgv: Signature made Wed Jan 19 08:09:19 2022 -12
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./profnet_1.0.22-8.dsc: no acceptable signature found
dpkg-source: info: extracting profnet in profnet-1.0.22
dpkg-source: info: unpacking profnet_1.0.22.orig.tar.gz
dpkg-source: info: unpacking profnet_1.0.22-8.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying spelling
dpkg-source: info: applying skip_some_flags_for_fortran.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/3988371/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='amd64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15'
DISTRIBUTION='bookworm'
HOME='/root'
HOST_ARCH='amd64'
IFS='
'
INVOCATION_ID='57ac4f3edcfe443589d8f0cd99bfb5b1'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='3988371'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6yO0fh1f/pbuilderrc_3qII --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6yO0fh1f/b1 --logfile b1/build.log profnet_1.0.22-8.dsc'
SUDO_GID='110'
SUDO_UID='105'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://78.137.99.97:3128'
I: uname -a
Linux ionos1-amd64 5.10.0-22-amd64 #1 SMP Debian 5.10.178-3 (2023-04-22) x86_64 GNU/Linux
I: ls -l /bin
total 5632
-rwxr-xr-x 1 root root 1265648 Apr 23 09:23 bash
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bunzip2
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bzcat
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep
-rwxr-xr-x 3 root root 39224 Sep 18 2022 bzip2
-rwxr-xr-x 1 root root 14568 Sep 18 2022 bzip2recover
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore
-rwxr-xr-x 1 root root 44016 Sep 20 2022 cat
-rwxr-xr-x 1 root root 68656 Sep 20 2022 chgrp
-rwxr-xr-x 1 root root 64496 Sep 20 2022 chmod
-rwxr-xr-x 1 root root 72752 Sep 20 2022 chown
-rwxr-xr-x 1 root root 151152 Sep 20 2022 cp
-rwxr-xr-x 1 root root 125640 Jan 5 01:20 dash
-rwxr-xr-x 1 root root 121904 Sep 20 2022 date
-rwxr-xr-x 1 root root 89240 Sep 20 2022 dd
-rwxr-xr-x 1 root root 102200 Sep 20 2022 df
-rwxr-xr-x 1 root root 151344 Sep 20 2022 dir
-rwxr-xr-x 1 root root 88656 Mar 22 22:02 dmesg
lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname
-rwxr-xr-x 1 root root 43856 Sep 20 2022 echo
-rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep
-rwxr-xr-x 1 root root 35664 Sep 20 2022 false
-rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep
-rwxr-xr-x 1 root root 85600 Mar 22 22:02 findmnt
-rwsr-xr-x 1 root root 35128 Mar 22 20:35 fusermount
-rwxr-xr-x 1 root root 203152 Jan 24 02:43 grep
-rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip
-rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe
-rwxr-xr-x 1 root root 98136 Apr 9 2022 gzip
-rwxr-xr-x 1 root root 22680 Dec 19 01:33 hostname
-rwxr-xr-x 1 root root 72824 Sep 20 2022 ln
-rwxr-xr-x 1 root root 53024 Mar 23 00:40 login
-rwxr-xr-x 1 root root 151344 Sep 20 2022 ls
-rwxr-xr-x 1 root root 207168 Mar 22 22:02 lsblk
-rwxr-xr-x 1 root root 97552 Sep 20 2022 mkdir
-rwxr-xr-x 1 root root 72912 Sep 20 2022 mknod
-rwxr-xr-x 1 root root 43952 Sep 20 2022 mktemp
-rwxr-xr-x 1 root root 59712 Mar 22 22:02 more
-rwsr-xr-x 1 root root 59704 Mar 22 22:02 mount
-rwxr-xr-x 1 root root 18744 Mar 22 22:02 mountpoint
-rwxr-xr-x 1 root root 142968 Sep 20 2022 mv
lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 43952 Sep 20 2022 pwd
lrwxrwxrwx 1 root root 4 Apr 23 09:23 rbash -> bash
-rwxr-xr-x 1 root root 52112 Sep 20 2022 readlink
-rwxr-xr-x 1 root root 72752 Sep 20 2022 rm
-rwxr-xr-x 1 root root 56240 Sep 20 2022 rmdir
-rwxr-xr-x 1 root root 27560 Nov 2 04:31 run-parts
-rwxr-xr-x 1 root root 126424 Jan 5 07:55 sed
lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash
-rwxr-xr-x 1 root root 43888 Sep 20 2022 sleep
-rwxr-xr-x 1 root root 85008 Sep 20 2022 stty
-rwsr-xr-x 1 root root 72000 Mar 22 22:02 su
-rwxr-xr-x 1 root root 39824 Sep 20 2022 sync
-rwxr-xr-x 1 root root 531984 Apr 6 02:25 tar
-rwxr-xr-x 1 root root 14520 Nov 2 04:31 tempfile
-rwxr-xr-x 1 root root 109616 Sep 20 2022 touch
-rwxr-xr-x 1 root root 35664 Sep 20 2022 true
-rwxr-xr-x 1 root root 14568 Mar 22 20:35 ulockmgr_server
-rwsr-xr-x 1 root root 35128 Mar 22 22:02 umount
-rwxr-xr-x 1 root root 43888 Sep 20 2022 uname
-rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress
-rwxr-xr-x 1 root root 151344 Sep 20 2022 vdir
-rwxr-xr-x 1 root root 72024 Mar 22 22:02 wdctl
lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat
-rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp
-rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff
-rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep
-rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep
-rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce
-rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep
-rwxr-xr-x 1 root root 2206 Apr 9 2022 zless
-rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore
-rwxr-xr-x 1 root root 4577 Apr 9 2022 znew
I: user script /srv/workspace/pbuilder/3988371/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), gfortran, rsync, debhelper
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19596 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on gfortran; however:
Package gfortran is not installed.
pbuilder-satisfydepends-dummy depends on rsync; however:
Package rsync is not installed.
pbuilder-satisfydepends-dummy depends on debhelper; however:
Package debhelper is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpopt0{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} rsync{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget
0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded.
Need to get 31.0 MB of archives. After unpacking 117 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main amd64 libpopt0 amd64 1.19+dfsg-1 [43.3 kB]
Get: 2 http://deb.debian.org/debian bookworm/main amd64 rsync amd64 3.2.7-1 [417 kB]
Get: 3 http://deb.debian.org/debian bookworm/main amd64 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 4 http://deb.debian.org/debian bookworm/main amd64 libmagic-mgc amd64 1:5.44-3 [305 kB]
Get: 5 http://deb.debian.org/debian bookworm/main amd64 libmagic1 amd64 1:5.44-3 [104 kB]
Get: 6 http://deb.debian.org/debian bookworm/main amd64 file amd64 1:5.44-3 [42.5 kB]
Get: 7 http://deb.debian.org/debian bookworm/main amd64 gettext-base amd64 0.21-12 [160 kB]
Get: 8 http://deb.debian.org/debian bookworm/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB]
Get: 9 http://deb.debian.org/debian bookworm/main amd64 groff-base amd64 1.22.4-10 [916 kB]
Get: 10 http://deb.debian.org/debian bookworm/main amd64 bsdextrautils amd64 2.38.1-5+b1 [86.6 kB]
Get: 11 http://deb.debian.org/debian bookworm/main amd64 libpipeline1 amd64 1.5.7-1 [38.5 kB]
Get: 12 http://deb.debian.org/debian bookworm/main amd64 man-db amd64 2.11.2-2 [1386 kB]
Get: 13 http://deb.debian.org/debian bookworm/main amd64 m4 amd64 1.4.19-3 [287 kB]
Get: 14 http://deb.debian.org/debian bookworm/main amd64 autoconf all 2.71-3 [332 kB]
Get: 15 http://deb.debian.org/debian bookworm/main amd64 autotools-dev all 20220109.1 [51.6 kB]
Get: 16 http://deb.debian.org/debian bookworm/main amd64 automake all 1:1.16.5-1.3 [823 kB]
Get: 17 http://deb.debian.org/debian bookworm/main amd64 autopoint all 0.21-12 [495 kB]
Get: 18 http://deb.debian.org/debian bookworm/main amd64 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 19 http://deb.debian.org/debian bookworm/main amd64 libtool all 2.4.7-5 [517 kB]
Get: 20 http://deb.debian.org/debian bookworm/main amd64 dh-autoreconf all 20 [17.1 kB]
Get: 21 http://deb.debian.org/debian bookworm/main amd64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 22 http://deb.debian.org/debian bookworm/main amd64 libsub-override-perl all 0.09-4 [9304 B]
Get: 23 http://deb.debian.org/debian bookworm/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 24 http://deb.debian.org/debian bookworm/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 25 http://deb.debian.org/debian bookworm/main amd64 libelf1 amd64 0.188-2.1 [174 kB]
Get: 26 http://deb.debian.org/debian bookworm/main amd64 dwz amd64 0.15-1 [109 kB]
Get: 27 http://deb.debian.org/debian bookworm/main amd64 libicu72 amd64 72.1-3 [9376 kB]
Get: 28 http://deb.debian.org/debian bookworm/main amd64 libxml2 amd64 2.9.14+dfsg-1.2 [687 kB]
Get: 29 http://deb.debian.org/debian bookworm/main amd64 gettext amd64 0.21-12 [1300 kB]
Get: 30 http://deb.debian.org/debian bookworm/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 31 http://deb.debian.org/debian bookworm/main amd64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 32 http://deb.debian.org/debian bookworm/main amd64 debhelper all 13.11.4 [942 kB]
Get: 33 http://deb.debian.org/debian bookworm/main amd64 libgfortran5 amd64 12.2.0-14 [793 kB]
Get: 34 http://deb.debian.org/debian bookworm/main amd64 libgfortran-12-dev amd64 12.2.0-14 [834 kB]
Get: 35 http://deb.debian.org/debian bookworm/main amd64 gfortran-12 amd64 12.2.0-14 [10.2 MB]
Get: 36 http://deb.debian.org/debian bookworm/main amd64 gfortran amd64 4:12.2.0-3 [1428 B]
Fetched 31.0 MB in 2s (20.1 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpopt0:amd64.
(Reading database ...
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(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19596 files and directories currently installed.)
Preparing to unpack .../00-libpopt0_1.19+dfsg-1_amd64.deb ...
Unpacking libpopt0:amd64 (1.19+dfsg-1) ...
Selecting previously unselected package rsync.
Preparing to unpack .../01-rsync_3.2.7-1_amd64.deb ...
Unpacking rsync (3.2.7-1) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ...
Unpacking sensible-utils (0.0.17+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_amd64.deb ...
Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:amd64.
Preparing to unpack .../04-libmagic1_1%3a5.44-3_amd64.deb ...
Unpacking libmagic1:amd64 (1:5.44-3) ...
Selecting previously unselected package file.
Preparing to unpack .../05-file_1%3a5.44-3_amd64.deb ...
Unpacking file (1:5.44-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../06-gettext-base_0.21-12_amd64.deb ...
Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:amd64.
Preparing to unpack .../07-libuchardet0_0.0.7-1_amd64.deb ...
Unpacking libuchardet0:amd64 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../08-groff-base_1.22.4-10_amd64.deb ...
Unpacking groff-base (1.22.4-10) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_amd64.deb ...
Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:amd64.
Preparing to unpack .../10-libpipeline1_1.5.7-1_amd64.deb ...
Unpacking libpipeline1:amd64 (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../11-man-db_2.11.2-2_amd64.deb ...
Unpacking man-db (2.11.2-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../12-m4_1.4.19-3_amd64.deb ...
Unpacking m4 (1.4.19-3) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../13-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../16-autopoint_0.21-12_all.deb ...
Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../17-libdebhelper-perl_13.11.4_all.deb ...
Unpacking libdebhelper-perl (13.11.4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../18-libtool_2.4.7-5_all.deb ...
Unpacking libtool (2.4.7-5) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../19-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../21-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../23-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:amd64.
Preparing to unpack .../24-libelf1_0.188-2.1_amd64.deb ...
Unpacking libelf1:amd64 (0.188-2.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../25-dwz_0.15-1_amd64.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:amd64.
Preparing to unpack .../26-libicu72_72.1-3_amd64.deb ...
Unpacking libicu72:amd64 (72.1-3) ...
Selecting previously unselected package libxml2:amd64.
Preparing to unpack .../27-libxml2_2.9.14+dfsg-1.2_amd64.deb ...
Unpacking libxml2:amd64 (2.9.14+dfsg-1.2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../28-gettext_0.21-12_amd64.deb ...
Unpacking gettext (0.21-12) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../31-debhelper_13.11.4_all.deb ...
Unpacking debhelper (13.11.4) ...
Selecting previously unselected package libgfortran5:amd64.
Preparing to unpack .../32-libgfortran5_12.2.0-14_amd64.deb ...
Unpacking libgfortran5:amd64 (12.2.0-14) ...
Selecting previously unselected package libgfortran-12-dev:amd64.
Preparing to unpack .../33-libgfortran-12-dev_12.2.0-14_amd64.deb ...
Unpacking libgfortran-12-dev:amd64 (12.2.0-14) ...
Selecting previously unselected package gfortran-12.
Preparing to unpack .../34-gfortran-12_12.2.0-14_amd64.deb ...
Unpacking gfortran-12 (12.2.0-14) ...
Selecting previously unselected package gfortran.
Preparing to unpack .../35-gfortran_4%3a12.2.0-3_amd64.deb ...
Unpacking gfortran (4:12.2.0-3) ...
Setting up libpipeline1:amd64 (1.5.7-1) ...
Setting up libicu72:amd64 (72.1-3) ...
Setting up bsdextrautils (2.38.1-5+b1) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up libmagic1:amd64 (1:5.44-3) ...
Setting up gettext-base (0.21-12) ...
Setting up m4 (1.4.19-3) ...
Setting up file (1:5.44-3) ...
Setting up autotools-dev (20220109.1) ...
Setting up autopoint (0.21-12) ...
Setting up libgfortran5:amd64 (12.2.0-14) ...
Setting up autoconf (2.71-3) ...
Setting up sensible-utils (0.0.17+nmu1) ...
Setting up libuchardet0:amd64 (0.0.7-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libelf1:amd64 (0.188-2.1) ...
Setting up libxml2:amd64 (2.9.14+dfsg-1.2) ...
Setting up libpopt0:amd64 (1.19+dfsg-1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gettext (0.21-12) ...
Setting up libtool (2.4.7-5) ...
Setting up libgfortran-12-dev:amd64 (12.2.0-14) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up gfortran-12 (12.2.0-14) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-10) ...
Setting up rsync (3.2.7-1) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.11.2-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up gfortran (4:12.2.0-3) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up debhelper (13.11.4) ...
Processing triggers for libc-bin (2.36-9) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/profnet-1.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../profnet_1.0.22-8_source.changes
dpkg-buildpackage: info: source package profnet
dpkg-buildpackage: info: source version 1.0.22-8
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture amd64
debian/rules clean
dh clean
dh_auto_clean
make -j15 distclean
make[1]: Entering directory '/build/profnet-1.0.22'
make -C src clean
make[2]: Entering directory '/build/profnet-1.0.22/src'
rm -f *.o profnet_prof
rm -rf bval_dir
rm -rf chop_dir
rm -rf con_dir
rm -rf isis_dir
make[2]: Leaving directory '/build/profnet-1.0.22/src'
make -C src-phd clean
make[2]: Entering directory '/build/profnet-1.0.22/src-phd'
rm -f *.o profphd_net
rm -rf md_dir
rm -rf norsnet_dir
make[2]: Leaving directory '/build/profnet-1.0.22/src-phd'
rm -f *.[0123456789].gz
rm -rf prof_dir
rm -rf snapfun_dir
rm -rf\
profnet-1.0.22 \
profnet-1.0.22.tar.gz
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/profnet-1.0.22'
make patch
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p bval_dir && rsync -avC src/. ./bval_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d bval_dir < bval.patch && touch bval_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p chop_dir && rsync -avC src/. ./chop_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d chop_dir < chop.patch && touch chop_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
mkdir -p con_dir && rsync -avC src/. ./con_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d con_dir < con.patch && touch con_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
patching file profPar.f
mkdir -p isis_dir && rsync -avC src/. ./isis_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d isis_dir < isis.patch && touch isis_dir/patch_stamp
patching file Makefile
Hunk #1 succeeded at 1 with fuzz 1.
patching file profPar.f
mkdir -p md_dir && rsync -avC src/. ./md_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d md_dir < md.patch && touch md_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p norsnet_dir && rsync -avC src/. ./norsnet_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 247,158.67 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d norsnet_dir < norsnet.patch && touch norsnet_dir/patch_stamp
patching file Makefile
patching file prof.f
patching file profPar.f
mkdir -p prof_dir && rsync -avC src/. ./prof_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d prof_dir < prof.patch && touch prof_dir/patch_stamp
mkdir -p snapfun_dir && rsync -avC src/. ./snapfun_dir/.
sending incremental file list
./
Doc-lib-nn
Doc-nn.txt
Makefile
PROFin.dat
RUN-special
ReadMe-mac
compile_macintel.csh
lib-LINUX.f
lib-prof.f
lib-sys-ALPHA.f
lib-sys-LINUX.f
lib-sys-MAC.f
lib-sys-MACIBM.f
lib-sys-MACINTEL.f
lib-sys-SGI64.f
make.ALPHA
make.LINUX
make.LINUX-pgi
make.MAC
make.MACIBM
make.MACINTEL
make.SGI32
make.SGI64
make.SGI64_no64
prof.f
profPar.f
tmp.f
sent 370,206 bytes received 532 bytes 741,476.00 bytes/sec
total size is 368,458 speedup is 0.99
patch -p 1 -E -d snapfun_dir < snapfun.patch && touch snapfun_dir/patch_stamp
patching file Makefile
patching file Makefile.orig
patching file profPar.f
make[2]: Leaving directory '/build/profnet-1.0.22'
make CFLAGS="-g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now"
make[2]: Entering directory '/build/profnet-1.0.22'
make -C bval_dir
make[3]: Entering directory '/build/profnet-1.0.22/bval_dir'
--- making profnet_bval
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_bval prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/bval_dir'
make -C chop_dir
make[3]: Entering directory '/build/profnet-1.0.22/chop_dir'
--- making profnet_chop
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_chop prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/chop_dir'
make -C con_dir
make[3]: Entering directory '/build/profnet-1.0.22/con_dir'
--- making profnet_con
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_con prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/con_dir'
make -C isis_dir
make[3]: Entering directory '/build/profnet-1.0.22/isis_dir'
--- making profnet_isis
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_isis prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/isis_dir'
make -C md_dir
make[3]: Entering directory '/build/profnet-1.0.22/md_dir'
--- making profnet_md
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_md prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/md_dir'
make -C norsnet_dir
make[3]: Entering directory '/build/profnet-1.0.22/norsnet_dir'
--- making profnet_norsnet
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_norsnet prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC,VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/norsnet_dir'
make -C prof_dir
make[3]: Entering directory '/build/profnet-1.0.22/prof_dir'
--- making profnet_prof
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_prof prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/prof_dir'
make -C snapfun_dir
make[3]: Entering directory '/build/profnet-1.0.22/snapfun_dir'
--- making profnet_snapfun
gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_snapfun prof.f lib-prof.f lib-sys-LINUX.f
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
prof.f:527:28:
527 | ERRBINSTOP= 0.95
| 1
Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion]
prof.f:1853:24:
1853 | CALL RDPAR_ERR('NUMIN ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1)
prof.f:1856:24:
1856 | CALL RDPAR_ERR('NUMHID ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1859:24:
1859 | CALL RDPAR_ERR('NUMOUT ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1864:24:
1864 | CALL RDPAR_ERR('NUMSAM ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1870:24:
1870 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1873:24:
1873 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1876:24:
1876 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1879:24:
1879 | CALL RDPAR_ERR(HC // ' ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1)
prof.f:1885:24:
1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1)
prof.f:1888:24:
1888 | CALL RDPAR_ERR('STPMAX ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1891:24:
1891 | CALL RDPAR_ERR('STPINF ',VARIN)
| 1
Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1)
prof.f:1334:45:
1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC)
| 1
Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument]
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran
f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran
make[3]: Leaving directory '/build/profnet-1.0.22/snapfun_dir'
pod2man -c 'User Commands' -r "1.0.22-" profnet.pod | gzip -c > profnet.1.gz
profnet.pod around line 27: Expected text after =item, not a number
profnet.pod around line 31: Expected text after =item, not a number
profnet.pod around line 35: Expected text after =item, not a number
profnet.pod around line 39: Expected text after =item, not a number
profnet.pod around line 43: Expected text after =item, not a number
profnet.pod around line 47: Expected text after =item, not a number
profnet.pod around line 51: Expected text after =item, not a number
profnet.pod around line 55: Expected text after =item, not a number
profnet.pod around line 59: Expected text after =item, not a number
profnet.pod around line 63: Expected text after =item, not a number
POD document had syntax errors at /usr/bin/pod2man line 69.
make -C src-phd
make[3]: Entering directory '/build/profnet-1.0.22/src-phd'
gfortran `echo -g -O2 -ffile-prefix-map=/build/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security | sed 's/-Wformat -Werror=format-security/-fallow-argument-mismatch/'` -O3 -fbounds-check -Wall -Wl,-z,relro -Wl,-z,now -o profphd_net phd.f lib-phd.f
phd.f:8107:5:
8107 | 19991 CONTINUE
| 1
Warning: Label 19991 at (1) defined but not used [-Wunused-label]
phd.f:7860:72:
7860 | INTERPROTNAME(1:7)=PROTNAME(1)
| 1
Warning: CHARACTER expression will be truncated in assignment (7/132) at (1) [-Wcharacter-truncation]
phd.f:7785:72:
7785 | INTERPROTNAME(1:7)=PROTNAME(1)
| 1
Warning: CHARACTER expression will be truncated in assignment (7/132) at (1) [-Wcharacter-truncation]
phd.f:4475:72:
4475 | TEMPSTRING(1:)=CSTRING(1:)
| 1
Warning: CHARACTER expression will be truncated in assignment (200/222) at (1) [-Wcharacter-truncation]
phd.f:4479:72:
4479 | TEMPSTRING(1:)=CSTRING(1:)
| 1
Warning: CHARACTER expression will be truncated in assignment (200/222) at (1) [-Wcharacter-truncation]
phd.f:2139:52:
357 | CALL SRMAX1(OUTLOC,NUMOUTMAX,RMAX,IMAX)
| 2
......
2139 | CALL SRMAX1(INTERMAX,NUMOUTMAX,INTERMAXVAL,INTERMAXPOS)
| 1
Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(4)).
phd.f:1437:40:
1437 | CHARACTER*1 FC_REXP_TO_3STCHAR,FC_REXPI_TO_3STCHAR
| 1
Warning: Unused variable 'fc_rexp_to_3stchar' declared at (1) [-Wunused-variable]
phd.f:3687:60:
3687 | + IPROTNAME(MAXALIGNS),ACCNUM(MAXALIGNS),
| 1
Warning: Array 'accnum' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3672:37:
3672 | CHARACTER*7 COLS(NUMRESMAX)
| 1
Warning: Array 'cols' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3597:40:
3597 | CHARACTER*132 CPROTID(MAXALIGNS)
| 1
Warning: Array 'cprotid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3686:39:
3686 | CHARACTER*132 EMBLID(MAXALIGNS),STRID(MAXALIGNS),
| 1
Warning: Array 'emblid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3688:44:
3688 | + EXCLUDEFLAG(MAXALIGNS)
| 1
Warning: Array 'excludeflag' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3687:42:
3687 | + IPROTNAME(MAXALIGNS),ACCNUM(MAXALIGNS),
| 1
Warning: Array 'iprotname' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3587:46:
3587 | INTEGER PROFILE(NUMRESMAX,MAXAA)
| 1
Warning: Array 'profile' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3700:46:
3700 | INTEGER SEQPROF(NUMRESMAX,MAXAA),
| 1
Warning: Array 'seqprof' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3686:56:
3686 | CHARACTER*132 EMBLID(MAXALIGNS),STRID(MAXALIGNS),
| 1
Warning: Array 'strid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising]
phd.f:3923:30:
3923 | + ACC,NOCC,VAR,ALISEQ,ALIPOINTER,
| 1
Warning: Unused dummy argument 'aliseq' at (1) [-Wunused-dummy-argument]
phd.f:3922:58:
3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
| 1
Warning: Unused dummy argument 'bp1' at (1) [-Wunused-dummy-argument]
phd.f:3922:62:
3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
| 1
Warning: Unused dummy argument 'bp2' at (1) [-Wunused-dummy-argument]
phd.f:3924:36:
3924 | + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT,
| 1
Warning: Unused dummy argument 'entropy' at (1) [-Wunused-dummy-argument]
phd.f:3916:31:
3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
| 1
Warning: Unused dummy argument 'maxaligns_loc' at (1) [-Wunused-dummy-argument]
phd.f:3916:43:
3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
| 1
Warning: Unused dummy argument 'maxcore_loc' at (1) [-Wunused-dummy-argument]
phd.f:3916:17:
3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC,
| 1
Warning: Unused dummy argument 'maxres' at (1) [-Wunused-dummy-argument]
phd.f:3924:43:
3924 | + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT,
| 1
Warning: Unused dummy argument 'relent' at (1) [-Wunused-dummy-argument]
phd.f:3922:54:
3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2,
| 1
Warning: Unused dummy argument 'sheetlabel' at (1) [-Wunused-dummy-argument]
phd.f:3923:23:
3923 | + ACC,NOCC,VAR,ALISEQ,ALIPOINTER,
| 1
Warning: Unused dummy argument 'var' at (1) [-Wunused-dummy-argument]
phd.f:64:41:
64 | REAL TIME0,FRTIME_SECNDS
| 1
Warning: Unused variable 'frtime_secnds' declared at (1) [-Wunused-variable]
make[3]: Leaving directory '/build/profnet-1.0.22/src-phd'
make[2]: Leaving directory '/build/profnet-1.0.22'
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_auto_test
create-stamp debian/debhelper-build-stamp
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-bval prefix=/usr install-bval
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-bval/usr/bin && \
cp -a bval_dir/profnet_bval \
/build/profnet-1.0.22/debian/profnet-bval/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1/profnet_bval.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-chop prefix=/usr install-chop
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-chop/usr/bin && \
cp -a chop_dir/profnet_chop \
/build/profnet-1.0.22/debian/profnet-chop/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1/profnet_chop.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-con prefix=/usr install-con
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-con/usr/bin && \
cp -a con_dir/profnet_con \
/build/profnet-1.0.22/debian/profnet-con/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-con/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-con/usr/share/man/man1/profnet_con.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-isis prefix=/usr install-isis
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-isis/usr/bin && \
cp -a isis_dir/profnet_isis \
/build/profnet-1.0.22/debian/profnet-isis/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1/profnet_isis.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-md prefix=/usr install-md
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-md/usr/bin && \
cp -a md_dir/profnet_md \
/build/profnet-1.0.22/debian/profnet-md/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-md/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-md/usr/share/man/man1/profnet_md.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-norsnet prefix=/usr install-norsnet
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-norsnet/usr/bin && \
cp -a norsnet_dir/profnet_norsnet \
/build/profnet-1.0.22/debian/profnet-norsnet/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1/profnet_norsnet.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-prof prefix=/usr install-prof
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-prof/usr/bin && \
cp -a prof_dir/profnet_prof \
/build/profnet-1.0.22/debian/profnet-prof/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1/profnet_prof.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profnet-snapfun prefix=/usr install-snapfun
make[2]: Entering directory '/build/profnet-1.0.22'
mkdir -p /build/profnet-1.0.22/debian/profnet-snapfun/usr/bin && \
cp -a snapfun_dir/profnet_snapfun \
/build/profnet-1.0.22/debian/profnet-snapfun/usr/bin/
mkdir -p /build/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1/profnet_snapfun.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
/usr/bin/make DESTDIR=/build/profnet-1.0.22/debian/profphd-net prefix=/usr install-phd
make[2]: Entering directory '/build/profnet-1.0.22'
/usr/bin/make -C src-phd install
make[3]: Entering directory '/build/profnet-1.0.22/src-phd'
mkdir -p /build/profnet-1.0.22/debian/profphd-net/usr/bin && \
cp profphd_net /build/profnet-1.0.22/debian/profphd-net/usr/bin/
rm -f /build/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994 && ln -s profphd_net /build/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994
make[3]: Leaving directory '/build/profnet-1.0.22/src-phd'
mkdir -p /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1 && cp profnet.1.gz /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/profphd_net.1.gz
rm -f /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz && ln -s profphd_net.1.gz /build/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz
make[2]: Leaving directory '/build/profnet-1.0.22'
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_installdocs
dh_installchangelogs
dh_installexamples
dh_installman
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
debian/rules override_dh_shlibdeps
make[1]: Entering directory '/build/profnet-1.0.22'
dh_shlibdeps
# sneak in common part of package descriptions
for i in $(sed -n '/^Package: / s///p' debian/control); do \
cat debian/Description >> debian/$i.substvars; \
done;
make[1]: Leaving directory '/build/profnet-1.0.22'
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: package profnet-prof: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profphd-net: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-snapfun: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-md: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-isis: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-chop: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-norsnet: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-con: substitution variable ${Description} unused, but is defined
dpkg-gencontrol: warning: package profnet-bval: substitution variable ${Description} unused, but is defined
dh_md5sums
dh_builddeb
dpkg-deb: building package 'profnet-bval' in '../profnet-bval_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-chop' in '../profnet-chop_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-prof' in '../profnet-prof_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-con' in '../profnet-con_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-isis' in '../profnet-isis_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-norsnet' in '../profnet-norsnet_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-md' in '../profnet-md_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-snapfun' in '../profnet-snapfun_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profphd-net' in '../profphd-net_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-bval-dbgsym' in '../profnet-bval-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-md-dbgsym' in '../profnet-md-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-norsnet-dbgsym' in '../profnet-norsnet-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-snapfun-dbgsym' in '../profnet-snapfun-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profphd-net-dbgsym' in '../profphd-net-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-chop-dbgsym' in '../profnet-chop-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-prof-dbgsym' in '../profnet-prof-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-con-dbgsym' in '../profnet-con-dbgsym_1.0.22-8_amd64.deb'.
dpkg-deb: building package 'profnet-isis-dbgsym' in '../profnet-isis-dbgsym_1.0.22-8_amd64.deb'.
dpkg-genbuildinfo --build=binary -O../profnet_1.0.22-8_amd64.buildinfo
dpkg-genchanges --build=binary -O../profnet_1.0.22-8_amd64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/3988371 and its subdirectories
I: Current time: Wed May 3 05:36:14 -12 2023
I: pbuilder-time-stamp: 1683135374