I: pbuilder: network access will be disabled during build I: Current time: Mon Jun 10 12:11:37 +14 2024 I: pbuilder-time-stamp: 1717971097 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libtrexio_2.2.3-3.dsc] I: copying [./libtrexio_2.2.3.orig.tar.gz] I: copying [./libtrexio_2.2.3-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Oct 8 02:14:49 2022 +14 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libtrexio_2.2.3-3.dsc: no acceptable signature found dpkg-source: info: extracting libtrexio in libtrexio-2.2.3 dpkg-source: info: unpacking libtrexio_2.2.3.orig.tar.gz dpkg-source: info: unpacking libtrexio_2.2.3-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixParallelTests.diff dpkg-source: info: applying fix32bitBuilds.diff I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/18686/tmp/hooks/D01_modify_environment starting debug: Running on codethink11-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 10 12:11 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/18686/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/18686/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.15(1)-release' BUILDDIR=/build BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DIRSTACK=() DISTRIBUTION=bookworm EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/var/lib/jenkins HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=18686 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cjxY3Qlw/pbuilderrc_VCcC --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cjxY3Qlw/b2 --logfile b2/build.log --extrapackages usrmerge libtrexio_2.2.3-3.dsc' SUDO_GID=117 SUDO_UID=110 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root USERNAME=root _='I: set' http_proxy=http://192.168.101.16:3128 I: uname -a Linux i-capture-the-hostname 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 9 06:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/18686/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), gfortran, pkg-config, libhdf5-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli1{a} libcurl4{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 37.4 MB of archives. After unpacking 153 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 libgfortran-12-dev arm64 12.2.0-14 [396 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 gfortran-12 arm64 12.2.0-14 [8646 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 gfortran arm64 4:12.2.0-3 [1420 B] Get: 35 http://deb.debian.org/debian bookworm/main arm64 hdf5-helpers arm64 1.10.8+repack1-1 [27.9 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libaec0 arm64 1.0.6-1+b1 [19.9 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libsz2 arm64 1.0.6-1+b1 [7740 B] Get: 38 http://deb.debian.org/debian bookworm/main arm64 libaec-dev arm64 1.0.6-1+b1 [18.7 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 43 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-9 [362 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 libcurl4-openssl-dev arm64 7.88.1-9 [471 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libhdf5-103-1 arm64 1.10.8+repack1-1 [1037 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libhdf5-cpp-103-1 arm64 1.10.8+repack1-1 [119 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 libhdf5-fortran-102 arm64 1.10.8+repack1-1 [91.1 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 libhdf5-hl-100 arm64 1.10.8+repack1-1 [64.0 kB] Get: 53 http://deb.debian.org/debian bookworm/main arm64 libhdf5-hl-fortran-100 arm64 1.10.8+repack1-1 [42.7 kB] Get: 54 http://deb.debian.org/debian bookworm/main arm64 libhdf5-hl-cpp-100 arm64 1.10.8+repack1-1 [25.4 kB] Get: 55 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB] Get: 56 http://deb.debian.org/debian bookworm/main arm64 libjpeg62-turbo arm64 1:2.1.5-2 [171 kB] Get: 57 http://deb.debian.org/debian bookworm/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-2 [292 kB] Get: 58 http://deb.debian.org/debian bookworm/main arm64 libjpeg-dev arm64 1:2.1.5-2 [71.8 kB] Get: 59 http://deb.debian.org/debian bookworm/main arm64 libssl-dev arm64 3.0.8-1 [2296 kB] Get: 60 http://deb.debian.org/debian bookworm/main arm64 libhdf5-dev arm64 1.10.8+repack1-1 [2654 kB] Get: 61 http://deb.debian.org/debian bookworm/main arm64 libpkgconf3 arm64 1.8.1-1 [35.3 kB] Get: 62 http://deb.debian.org/debian bookworm/main arm64 pkgconf-bin arm64 1.8.1-1 [28.9 kB] Get: 63 http://deb.debian.org/debian bookworm/main arm64 pkgconf arm64 1.8.1-1 [25.9 kB] Get: 64 http://deb.debian.org/debian bookworm/main arm64 pkg-config arm64 1.8.1-1 [13.7 kB] Fetched 37.4 MB in 1s (48.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../02-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../22-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../30-libgfortran5_12.2.0-14_arm64.deb ... Unpacking libgfortran5:arm64 (12.2.0-14) ... Selecting previously unselected package libgfortran-12-dev:arm64. Preparing to unpack .../31-libgfortran-12-dev_12.2.0-14_arm64.deb ... Unpacking libgfortran-12-dev:arm64 (12.2.0-14) ... Selecting previously unselected package gfortran-12. Preparing to unpack .../32-gfortran-12_12.2.0-14_arm64.deb ... Unpacking gfortran-12 (12.2.0-14) ... Selecting previously unselected package gfortran. Preparing to unpack .../33-gfortran_4%3a12.2.0-3_arm64.deb ... Unpacking gfortran (4:12.2.0-3) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../34-hdf5-helpers_1.10.8+repack1-1_arm64.deb ... Unpacking hdf5-helpers (1.10.8+repack1-1) ... Selecting previously unselected package libaec0:arm64. Preparing to unpack .../35-libaec0_1.0.6-1+b1_arm64.deb ... Unpacking libaec0:arm64 (1.0.6-1+b1) ... Selecting previously unselected package libsz2:arm64. Preparing to unpack .../36-libsz2_1.0.6-1+b1_arm64.deb ... Unpacking libsz2:arm64 (1.0.6-1+b1) ... Selecting previously unselected package libaec-dev:arm64. Preparing to unpack .../37-libaec-dev_1.0.6-1+b1_arm64.deb ... Unpacking libaec-dev:arm64 (1.0.6-1+b1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../38-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../39-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... 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Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcurl4-openssl-dev:arm64 (7.88.1-9) ... Setting up libhdf5-103-1:arm64 (1.10.8+repack1-1) ... Setting up libhdf5-cpp-103-1:arm64 (1.10.8+repack1-1) ... Setting up libhdf5-hl-100:arm64 (1.10.8+repack1-1) ... Setting up debhelper (13.11.4) ... Setting up libhdf5-hl-cpp-100:arm64 (1.10.8+repack1-1) ... Setting up libhdf5-fortran-102:arm64 (1.10.8+repack1-1) ... Setting up libhdf5-hl-fortran-100:arm64 (1.10.8+repack1-1) ... Setting up libhdf5-dev (1.10.8+repack1-1) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... usrmerge is already the newest version (35). fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: user script /srv/workspace/pbuilder/18686/tmp/hooks/A99_set_merged_usr starting Re-configuring usrmerge... I: user script /srv/workspace/pbuilder/18686/tmp/hooks/A99_set_merged_usr finished hostname: Temporary failure in name resolution I: Running cd /build/libtrexio-2.2.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../libtrexio_2.2.3-3_source.changes dpkg-buildpackage: info: source package libtrexio dpkg-buildpackage: info: source version 2.2.3-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'build-config'. libtoolize: copying file 'build-config/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:14: installing 'build-config/compile' configure.ac:12: installing 'build-config/missing' Makefile.am: installing 'build-config/depcomp' dh_auto_configure ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking whether make supports the include directive... yes (GNU style) checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking for ar... ar checking the archiver (ar) interface... ar checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert aarch64-unknown-linux-gnu file names to aarch64-unknown-linux-gnu format... func_convert_file_noop checking how to convert aarch64-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for file... file checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /usr/bin/dd checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gcc... (cached) gcc checking whether the compiler supports GNU C... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to enable C11 features... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking whether gcc and cc understand -c and -o together... yes checking for gfortran... gfortran checking whether the compiler supports GNU Fortran... yes checking whether gfortran accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... yes checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile .f90 files... none checking whether gfortran understands -c and -o together... yes checking how to get verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/aarch64-linux-gnu/12 -L/usr/lib/gcc/aarch64-linux-gnu/12/../../../aarch64-linux-gnu -L/usr/lib/gcc/aarch64-linux-gnu/12/../../../../lib -L/lib/aarch64-linux-gnu -L/lib/../lib -L/usr/lib/aarch64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/aarch64-linux-gnu/12/../../.. -lgfortran -lm checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking whether ln -s works... yes checking for grep that handles long lines and -e... (cached) /usr/bin/grep checking for fcntl.h... yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for stdbool.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for unistd.h... (cached) yes checking for h5cc... /usr/bin/h5cc checking for HDF5 type... serial checking for HDF5 libraries... yes (version 1.10.8) checking for hdf5.h... yes checking for H5Fcreate in -lhdf5... yes checking for main in -lhdf5_hl... yes checking for matching HDF5 Fortran wrapper... /usr/bin/h5fc checking for hdf5 >= 1.8... yes ./configure: line 18943: -I/usr/include/hdf5/serial : No such file or directory checking for int32_t... yes checking for int64_t... yes checking for size_t... yes checking for uint32_t... yes checking for uint64_t... yes checking for memset... yes checking for mkdir... yes checking for strerror... yes checking for library containing sqrt... none required checking for math.h... yes checking for library containing pthread_create... none required checking for pthread.h... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating pkgconfig/trexio.pc config.status: creating include/config.h config.status: executing depfiles commands config.status: executing libtool commands ------------------------------------------------- trexio Version 2.2.3 8cc4f848f5419534388b33840d4374653a5d8ead Prefix ........: /usr CC ............: gcc CPPFLAGS ......: -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 CFLAGS ........: -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC FC ............: gfortran FCFLAGS .......: -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC LDFLAGS .......: -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro LIBS ..........: -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm Package features: Compilation with HDF5 ..: yes HDF5 version ...........: 1.10.8 Now type 'make []' where the optional is: all - build C library and Fortran binding check - run unit tests install - install the library -------------------------------------------------- dh_auto_build make -j8 make[1]: Entering directory '/build/libtrexio-2.2.3' gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -c -o tests/trexio_f.o tests/trexio_f.f90 make all-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio.lo src/trexio.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio_text.lo src/trexio_text.c /bin/sh ./libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o src/trexio_hdf5.lo src/trexio_hdf5.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_hdf5.c -fPIC -DPIC -o src/.libs/trexio_hdf5.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio.c -fPIC -DPIC -o src/.libs/trexio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_text.c -fPIC -DPIC -o src/.libs/trexio_text.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_hdf5.c -o src/trexio_hdf5.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio_text.c -o src/trexio_text.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c src/trexio.c -o src/trexio.o >/dev/null 2>&1 /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o src/libtrexio.la -rpath /usr/lib/aarch64-linux-gnu src/trexio.lo src/trexio_text.lo src/trexio_hdf5.lo -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -shared -fPIC -DPIC src/.libs/trexio.o src/.libs/trexio_text.o src/.libs/trexio_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-soname -Wl,libtrexio.so.0 -o src/.libs/libtrexio.so.0.0.0 libtool: link: (cd "src/.libs" && rm -f "libtrexio.so.0" && ln -s "libtrexio.so.0.0.0" "libtrexio.so.0") libtool: link: (cd "src/.libs" && rm -f "libtrexio.so" && ln -s "libtrexio.so.0.0.0" "libtrexio.so") libtool: link: ar cr src/.libs/libtrexio.a src/trexio.o src/trexio_text.o src/trexio_hdf5.o libtool: link: ranlib src/.libs/libtrexio.a libtool: link: ( cd "src/.libs" && rm -f "libtrexio.la" && ln -s "../libtrexio.la" "libtrexio.la" ) make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' dh_auto_test make -j8 check "TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1 make[1]: Entering directory '/build/libtrexio-2.2.3' make check-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' make tests/open_text tests/io_num_text tests/io_dset_float_text tests/io_dset_int_text tests/io_dset_sparse_text tests/io_determinant_text tests/io_safe_dset_float_text tests/io_str_text tests/io_dset_str_text tests/delete_group_text tests/overwrite_all_text tests/io_all tests/pre_close tests/open_hdf5 tests/io_num_hdf5 tests/io_dset_float_hdf5 tests/io_dset_int_hdf5 tests/io_dset_sparse_hdf5 tests/io_determinant_hdf5 tests/io_safe_dset_float_hdf5 tests/io_str_hdf5 tests/io_dset_str_hdf5 tests/delete_group_hdf5 tests/overwrite_all_hdf5 tests/test_f make[4]: Entering directory '/build/libtrexio-2.2.3' gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/open_text.o tests/open_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_num_text.o tests/io_num_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_float_text.o tests/io_dset_float_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_int_text.o tests/io_dset_int_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_sparse_text.o tests/io_dset_sparse_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_determinant_text.o tests/io_determinant_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_safe_dset_float_text.o tests/io_safe_dset_float_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_str_text.o tests/io_str_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_str_text.o tests/io_dset_str_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/delete_group_text.o tests/delete_group_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/overwrite_all_text.o tests/overwrite_all_text.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_all.o tests/io_all.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/pre_close.o tests/pre_close.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/open_hdf5.o tests/open_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_num_hdf5.o tests/io_num_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_float_hdf5.o tests/io_dset_float_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_int_hdf5.o tests/io_dset_int_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_sparse_hdf5.o tests/io_dset_sparse_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_determinant_hdf5.o tests/io_determinant_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_safe_dset_float_hdf5.o tests/io_safe_dset_float_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_str_hdf5.o tests/io_str_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/io_dset_str_hdf5.o tests/io_dset_str_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/delete_group_hdf5.o tests/delete_group_hdf5.c gcc -DHAVE_CONFIG_H -I. -I./include -I./src -I./include -I/usr/include -I/usr/include/hdf5/serial -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -c -o tests/overwrite_all_hdf5.o tests/overwrite_all_hdf5.c gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -c -o tests/test_f.o tests/test_f.f90 /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/open_text tests/open_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_num_text tests/io_num_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_float_text tests/io_dset_float_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_int_text tests/io_dset_int_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_sparse_text tests/io_dset_sparse_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_determinant_text tests/io_determinant_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/open_text tests/open_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_num_text tests/io_num_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_float_text tests/io_dset_float_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_int_text tests/io_dset_int_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_safe_dset_float_text tests/io_safe_dset_float_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_sparse_text tests/io_dset_sparse_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_determinant_text tests/io_determinant_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_str_text tests/io_str_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_str_text tests/io_dset_str_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/delete_group_text tests/delete_group_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/overwrite_all_text tests/overwrite_all_text.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_all tests/io_all.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_safe_dset_float_text tests/io_safe_dset_float_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/pre_close tests/pre_close.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/open_hdf5 tests/open_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_str_text tests/io_str_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_str_text tests/io_dset_str_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/overwrite_all_text tests/overwrite_all_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/delete_group_text tests/delete_group_text.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_all tests/io_all.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/pre_close tests/pre_close.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_num_hdf5 tests/io_num_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/open_hdf5 tests/open_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_float_hdf5 tests/io_dset_float_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_int_hdf5 tests/io_dset_int_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_sparse_hdf5 tests/io_dset_sparse_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_determinant_hdf5 tests/io_determinant_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_safe_dset_float_hdf5 tests/io_safe_dset_float_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_num_hdf5 tests/io_num_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_str_hdf5 tests/io_str_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_float_hdf5 tests/io_dset_float_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/io_dset_str_hdf5 tests/io_dset_str_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_int_hdf5 tests/io_dset_int_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_sparse_hdf5 tests/io_dset_sparse_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_determinant_hdf5 tests/io_determinant_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_safe_dset_float_hdf5 tests/io_safe_dset_float_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/delete_group_hdf5 tests/delete_group_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_str_hdf5 tests/io_str_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=CC --mode=link gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/overwrite_all_hdf5 tests/overwrite_all_hdf5.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm /bin/sh ./libtool --tag=FC --mode=link gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-z,relro -o tests/test_f tests/trexio_f.o tests/test_f.o src/libtrexio.la -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/io_dset_str_hdf5 tests/io_dset_str_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/delete_group_hdf5 tests/delete_group_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gcc -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wl,-z -Wl,relro -o tests/.libs/overwrite_all_hdf5 tests/overwrite_all_hdf5.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm libtool: link: gfortran -g -O2 -ffile-prefix-map=/build/libtrexio-2.2.3=. -fstack-protector-strong -ffree-form -fPIC -Wl,-z -Wl,relro -o tests/.libs/test_f tests/trexio_f.o tests/test_f.o -L/usr/lib/aarch64-linux-gnu/hdf5/serial src/.libs/libtrexio.so -lhdf5_hl -lhdf5 -lcrypto -lcurl -lpthread -lsz -lz -ldl -lm make[4]: Leaving directory '/build/libtrexio-2.2.3' make check-TESTS make[4]: Entering directory '/build/libtrexio-2.2.3' make[5]: Entering directory '/build/libtrexio-2.2.3' PASS: tests/io_determinant_text PASS: tests/io_dset_float_text PASS: tests/io_safe_dset_float_text PASS: tests/io_str_text PASS: tests/io_dset_sparse_text PASS: tests/io_dset_int_text PASS: tests/io_num_text PASS: tests/open_text PASS: tests/io_dset_str_text PASS: tests/delete_group_text PASS: tests/io_all PASS: tests/overwrite_all_text PASS: tests/open_hdf5 PASS: tests/io_num_hdf5 PASS: tests/pre_close PASS: tests/io_dset_float_hdf5 PASS: tests/io_dset_int_hdf5 PASS: tests/io_safe_dset_float_hdf5 PASS: tests/io_determinant_hdf5 PASS: tests/io_dset_sparse_hdf5 PASS: tests/io_dset_str_hdf5 PASS: tests/delete_group_hdf5 PASS: tests/io_str_hdf5 PASS: tests/overwrite_all_hdf5 PASS: tests/test_f ============================================================================ Testsuite summary for trexio 2.2.3 ============================================================================ # TOTAL: 25 # PASS: 25 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/libtrexio-2.2.3' make[4]: Leaving directory '/build/libtrexio-2.2.3' make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j1 install DESTDIR=/build/libtrexio-2.2.3/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/libtrexio-2.2.3' make install-recursive make[2]: Entering directory '/build/libtrexio-2.2.3' make[3]: Entering directory '/build/libtrexio-2.2.3' make[4]: Entering directory '/build/libtrexio-2.2.3' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu' /bin/sh ./libtool --mode=install /usr/bin/install -c src/libtrexio.la '/build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu' libtool: install: /usr/bin/install -c src/.libs/libtrexio.so.0.0.0 /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/libtrexio.so.0.0.0 libtool: install: (cd /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libtrexio.so.0.0.0 libtrexio.so.0 || { rm -f libtrexio.so.0 && ln -s libtrexio.so.0.0.0 libtrexio.so.0; }; }) libtool: install: (cd /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu && { ln -s -f libtrexio.so.0.0.0 libtrexio.so || { rm -f libtrexio.so && ln -s libtrexio.so.0.0.0 libtrexio.so; }; }) libtool: install: /usr/bin/install -c src/.libs/libtrexio.lai /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/libtrexio.la libtool: install: /usr/bin/install -c src/.libs/libtrexio.a /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/libtrexio.a libtool: install: chmod 644 /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/libtrexio.a libtool: install: ranlib /build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/libtrexio.a libtool: warning: remember to run 'libtool --finish /usr/lib/aarch64-linux-gnu' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/share/doc/trexio' /usr/bin/install -c -m 644 docs/index.html docs/examples.html docs/templator_hdf5.html docs/trex.html docs/README.html docs/templator_front.html docs/templator_text.html docs/trexio.css docs/tutorial_benzene.html docs/.htmlizer '/build/libtrexio-2.2.3/debian/tmp/usr/share/doc/trexio' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/include' /usr/bin/install -c -m 644 include/trexio.h include/trexio_f.f90 '/build/libtrexio-2.2.3/debian/tmp/usr/include' /usr/bin/mkdir -p '/build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 pkgconfig/trexio.pc '/build/libtrexio-2.2.3/debian/tmp/usr/lib/aarch64-linux-gnu/pkgconfig' make[4]: Leaving directory '/build/libtrexio-2.2.3' make[3]: Leaving directory '/build/libtrexio-2.2.3' make[2]: Leaving directory '/build/libtrexio-2.2.3' make[1]: Leaving directory '/build/libtrexio-2.2.3' dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/aarch64-linux-gnu/libtrexio.la exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/.htmlizer exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/README.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/examples.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/index.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_front.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_hdf5.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/templator_text.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/trex.html exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/trexio.css exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/share/doc/trexio/tutorial_benzene.html exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libtrexio-dev (5), libtrexio0 (2) * dh_installdocs: libtrexio-dev (0), libtrexio0 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "aarch64-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtrexio0' in '../libtrexio0_2.2.3-3_arm64.deb'. dpkg-deb: building package 'libtrexio-dev' in '../libtrexio-dev_2.2.3-3_arm64.deb'. dpkg-deb: building package 'libtrexio0-dbgsym' in '../libtrexio0-dbgsym_2.2.3-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libtrexio_2.2.3-3_arm64.buildinfo dpkg-genchanges --build=binary -O../libtrexio_2.2.3-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/18686/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/18686/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/18686 and its subdirectories I: Current time: Mon Jun 10 12:13:39 +14 2024 I: pbuilder-time-stamp: 1717971219