I: pbuilder: network access will be disabled during build I: Current time: Thu May 30 14:24:29 -12 2024 I: pbuilder-time-stamp: 1717122269 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.14.0-1.dsc] I: copying [./packmol_20.14.0.orig.tar.gz] I: copying [./packmol_20.14.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Feb 2 23:42:57 2023 -12 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./packmol_20.14.0-1.dsc: no acceptable signature found dpkg-source: info: extracting packmol in packmol-20.14.0 dpkg-source: info: unpacking packmol_20.14.0.orig.tar.gz dpkg-source: info: unpacking packmol_20.14.0-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/22703/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='22703' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.u8Foek44/pbuilderrc_bDgg --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.u8Foek44/b1 --logfile b1/build.log packmol_20.14.0-1.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink11-arm64 4.15.0-210-generic #221-Ubuntu SMP Tue Apr 18 08:32:48 UTC 2023 aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 30 04:48 /bin -> usr/bin I: user script /srv/workspace/pbuilder/22703/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-12{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran-12-dev{a} libgfortran5{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 52 newly installed, 0 to remove and 0 not upgraded. Need to get 39.3 MB of archives. After unpacking 155 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main arm64 libproc2-0 arm64 2:4.0.2-3 [60.1 kB] Get: 2 http://deb.debian.org/debian bookworm/main arm64 procps arm64 2:4.0.2-3 [698 kB] Get: 3 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB] Get: 6 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB] Get: 8 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB] Get: 10 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB] Get: 11 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB] Get: 12 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB] Get: 13 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB] Get: 14 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB] Get: 19 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.2 [620 kB] Get: 20 http://deb.debian.org/debian bookworm/main arm64 libarchive13 arm64 3.6.2-1 [316 kB] Get: 21 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB] Get: 22 http://deb.debian.org/debian bookworm/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg-10 [20.8 kB] Get: 23 http://deb.debian.org/debian bookworm/main arm64 libsasl2-2 arm64 2.1.28+dfsg-10 [58.0 kB] Get: 24 http://deb.debian.org/debian bookworm/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5 [171 kB] Get: 25 http://deb.debian.org/debian bookworm/main arm64 libnghttp2-14 arm64 1.52.0-1 [67.9 kB] Get: 26 http://deb.debian.org/debian bookworm/main arm64 libpsl5 arm64 0.21.2-1 [58.6 kB] Get: 27 http://deb.debian.org/debian bookworm/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 28 http://deb.debian.org/debian bookworm/main arm64 libssh2-1 arm64 1.10.0-3+b1 [172 kB] Get: 29 http://deb.debian.org/debian bookworm/main arm64 libcurl4 arm64 7.88.1-9 [362 kB] Get: 30 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB] Get: 31 http://deb.debian.org/debian bookworm/main arm64 libjsoncpp25 arm64 1.9.5-4 [72.3 kB] Get: 32 http://deb.debian.org/debian bookworm/main arm64 librhash0 arm64 1.4.3-3 [131 kB] Get: 33 http://deb.debian.org/debian bookworm/main arm64 libuv1 arm64 1.44.2-1 [133 kB] Get: 34 http://deb.debian.org/debian bookworm/main arm64 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main arm64 cmake arm64 3.25.1-1 [6806 kB] Get: 36 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 37 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB] Get: 38 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 39 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 40 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B] Get: 41 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 42 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 43 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB] Get: 44 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB] Get: 45 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB] Get: 46 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 47 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB] Get: 49 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB] Get: 50 http://deb.debian.org/debian bookworm/main arm64 libgfortran-12-dev arm64 12.2.0-14 [396 kB] Get: 51 http://deb.debian.org/debian bookworm/main arm64 gfortran-12 arm64 12.2.0-14 [8646 kB] Get: 52 http://deb.debian.org/debian bookworm/main arm64 gfortran arm64 4:12.2.0-3 [1420 B] Fetched 39.3 MB in 2s (20.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19616 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_arm64.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_arm64.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../04-libmagic1_1%3a5.44-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_arm64.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_arm64.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_arm64.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.38.1-5+b1_arm64.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../10-libpipeline1_1.5.7-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.11.2-2_arm64.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-3_arm64.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../17-libicu72_72.1-3_arm64.deb ... Unpacking libicu72:arm64 (72.1-3) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../18-libxml2_2.9.14+dfsg-1.2_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.2) ... Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../19-libarchive13_3.6.2-1_arm64.deb ... Unpacking libarchive13:arm64 (3.6.2-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../20-libbrotli1_1.0.9-2+b6_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../21-libsasl2-modules-db_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../22-libsasl2-2_2.1.28+dfsg-10_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../23-libldap-2.5-0_2.5.13+dfsg-5_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../24-libnghttp2-14_1.52.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.52.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../25-libpsl5_0.21.2-1_arm64.deb ... Unpacking libpsl5:arm64 (0.21.2-1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../26-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../27-libssh2-1_1.10.0-3+b1_arm64.deb ... Unpacking libssh2-1:arm64 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../28-libcurl4_7.88.1-9_arm64.deb ... Unpacking libcurl4:arm64 (7.88.1-9) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../29-libexpat1_2.5.0-1_arm64.deb ... Unpacking libexpat1:arm64 (2.5.0-1) ... Selecting previously unselected package libjsoncpp25:arm64. Preparing to unpack .../30-libjsoncpp25_1.9.5-4_arm64.deb ... Unpacking libjsoncpp25:arm64 (1.9.5-4) ... Selecting previously unselected package librhash0:arm64. Preparing to unpack .../31-librhash0_1.4.3-3_arm64.deb ... Unpacking librhash0:arm64 (1.4.3-3) ... Selecting previously unselected package libuv1:arm64. Preparing to unpack .../32-libuv1_1.44.2-1_arm64.deb ... Unpacking libuv1:arm64 (1.44.2-1) ... Selecting previously unselected package cmake-data. Preparing to unpack .../33-cmake-data_3.25.1-1_all.deb ... Unpacking cmake-data (3.25.1-1) ... Selecting previously unselected package cmake. Preparing to unpack .../34-cmake_3.25.1-1_arm64.deb ... Unpacking cmake (3.25.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../35-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../36-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../37-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../38-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../39-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../40-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../41-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:arm64. Preparing to unpack .../42-libelf1_0.188-2.1_arm64.deb ... Unpacking libelf1:arm64 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../43-dwz_0.15-1_arm64.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package gettext. Preparing to unpack .../44-gettext_0.21-12_arm64.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../45-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../46-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../47-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../48-libgfortran5_12.2.0-14_arm64.deb ... Unpacking libgfortran5:arm64 (12.2.0-14) ... Selecting previously unselected package libgfortran-12-dev:arm64. Preparing to unpack .../49-libgfortran-12-dev_12.2.0-14_arm64.deb ... Unpacking libgfortran-12-dev:arm64 (12.2.0-14) ... Selecting previously unselected package gfortran-12. Preparing to unpack .../50-gfortran-12_12.2.0-14_arm64.deb ... Unpacking gfortran-12 (12.2.0-14) ... Selecting previously unselected package gfortran. Preparing to unpack .../51-gfortran_4%3a12.2.0-3_arm64.deb ... Unpacking gfortran (4:12.2.0-3) ... Setting up libexpat1:arm64 (2.5.0-1) ... Setting up libpipeline1:arm64 (1.5.7-1) ... Setting up libpsl5:arm64 (0.21.2-1) ... Setting up libicu72:arm64 (72.1-3) ... Setting up bsdextrautils (2.38.1-5+b1) ... Setting up libmagic-mgc (1:5.44-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b6) ... Setting up libnghttp2-14:arm64 (1.52.0-1) ... Setting up libmagic1:arm64 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg-10) ... Setting up autotools-dev (20220109.1) ... Setting up libuv1:arm64 (1.44.2-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libproc2-0:arm64 (2:4.0.2-3) ... Setting up autopoint (0.21-12) ... Setting up libjsoncpp25:arm64 (1.9.5-4) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg-10) ... Setting up libgfortran5:arm64 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:arm64 (1.4.3-3) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:arm64 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libelf1:arm64 (0.188-2.1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:arm64 (3.6.2-1) ... Setting up libgfortran-12-dev:arm64 (12.2.0-14) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up gfortran-12 (12.2.0-14) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up libcurl4:arm64 (7.88.1-9) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:12.2.0-3) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up cmake (3.25.1-1) ... Setting up debhelper (13.11.4) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.31-1.2). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/packmol-20.14.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../packmol_20.14.0-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 1:20.14.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 2.8.12 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The Fortran compiler identification is GNU 12.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/packmol-20.14.0/obj-aarch64-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles /build/packmol-20.14.0/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' cd /build/packmol-20.14.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/packmol-20.14.0 /build/packmol-20.14.0 /build/packmol-20.14.0/obj-aarch64-linux-gnu /build/packmol-20.14.0/obj-aarch64-linux-gnu /build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake --color= Dependee "/build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/depend.internal". Dependee "/build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/depend.internal". Scanning dependencies of target packmol make[3]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build make[3]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' [ 2%] Building Fortran object CMakeFiles/packmol.dir/src/sizes.f90.o [ 5%] Building Fortran object CMakeFiles/packmol.dir/src/ahestetic.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/sizes.f90 -o CMakeFiles/packmol.dir/src/sizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/ahestetic.f90 -o CMakeFiles/packmol.dir/src/ahestetic.f90.o [ 10%] Building Fortran object CMakeFiles/packmol.dir/src/swaptypemod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/swaptypemod.f90 -o CMakeFiles/packmol.dir/src/swaptypemod.f90.o [ 7%] Building Fortran object CMakeFiles/packmol.dir/src/exit_codes.f90.o [ 12%] Building Fortran object CMakeFiles/packmol.dir/src/gencan.f.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/exit_codes.f90 -o CMakeFiles/packmol.dir/src/exit_codes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gencan.f -o CMakeFiles/packmol.dir/src/gencan.f.o [ 15%] Building Fortran object CMakeFiles/packmol.dir/src/setibox.f90.o /usr/bin/cmake -E cmake_copy_f90_mod ahestetic.mod CMakeFiles/packmol.dir/ahestetic.mod.stamp GNU /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setibox.f90 -o CMakeFiles/packmol.dir/src/setibox.f90.o f951: Warning: Nonconforming tab character in column 1 of line 2193 [-Wtabs] [ 17%] Building Fortran object CMakeFiles/packmol.dir/src/flashsort.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/flashsort.f90 -o CMakeFiles/packmol.dir/src/flashsort.f90.o [ 20%] Building Fortran object CMakeFiles/packmol.dir/src/jacobi.f90.o /usr/bin/cmake -E cmake_copy_f90_mod sizes.mod CMakeFiles/packmol.dir/sizes.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod exit_codes.mod CMakeFiles/packmol.dir/exit_codes.mod.stamp GNU /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/jacobi.f90 -o CMakeFiles/packmol.dir/src/jacobi.f90.o [ 23%] Building Fortran object CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E cmake_copy_f90_mod swaptypemod.mod CMakeFiles/packmol.dir/swaptypemod.mod.stamp GNU /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/random.f90 -o CMakeFiles/packmol.dir/src/random.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/ahestetic.f90.o.provides.build [ 25%] Building Fortran object CMakeFiles/packmol.dir/src/title.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/title.f90 -o CMakeFiles/packmol.dir/src/title.f90.o [ 28%] Building Fortran object CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/comparegrad.f90 -o CMakeFiles/packmol.dir/src/comparegrad.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/exit_codes.f90.o.provides.build [ 30%] Building Fortran object CMakeFiles/packmol.dir/src/compute_data.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/compute_data.f90 -o CMakeFiles/packmol.dir/src/compute_data.f90.o [ 33%] Building Fortran object CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/flashmod.f90 -o CMakeFiles/packmol.dir/src/flashmod.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/sizes.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/swaptypemod.f90.o.provides.build [ 35%] Building Fortran object CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/input.f90 -o CMakeFiles/packmol.dir/src/input.f90.o /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU [ 38%] Building Fortran object CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/flashmod.f90.o.provides.build /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/usegencan.f90 -o CMakeFiles/packmol.dir/src/usegencan.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/compute_data.f90.o.provides.build /build/packmol-20.14.0/src/gencan.f:2574:5: 2574 | 1003 format(6X,I6,T22,D17.6,T43,D17.6) | 1 Warning: Label 1003 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5662:5: 5662 | 110 IF (DABS(DX(I)).LE.XMAX) GO TO 115 | 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5661:5: 5661 | 70 IF (DABS(DX(I)).GT.CUTLO) GO TO 75 | 1 Warning: Label 70 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5654:5: 5654 | 50 IF (DX(I).EQ.ZERO) GO TO 200 | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:5652:5: 5652 | 30 IF (DABS(DX(I)).GT.CUTLO) GO TO 85 | 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] /build/packmol-20.14.0/src/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:40: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:33: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2585:12: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2584:71: 2584 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:61: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:3819:54: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] [ 41%] Building Fortran object CMakeFiles/packmol.dir/src/fparc.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/fparc.f90 -o CMakeFiles/packmol.dir/src/fparc.f90.o /build/packmol-20.14.0/src/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:2981:19: 2981 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:19: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:52: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:56: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5179:12: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:71: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:5178:64: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/packmol-20.14.0/src/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] [ 43%] Building Fortran object CMakeFiles/packmol.dir/src/gparc.f90.o /build/packmol-20.14.0/src/gencan.f:525:37: 525 | double precision lastgpns(tmax) | 1 Warning: Array 'lastgpns' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gparc.f90 -o CMakeFiles/packmol.dir/src/gparc.f90.o [ 46%] Building Fortran object CMakeFiles/packmol.dir/src/gwalls.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/gwalls.f90 -o CMakeFiles/packmol.dir/src/gwalls.f90.o [ 48%] Building Fortran object CMakeFiles/packmol.dir/src/comprest.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/comprest.f90 -o CMakeFiles/packmol.dir/src/comprest.f90.o [ 51%] Building Fortran object CMakeFiles/packmol.dir/src/polartocart.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/polartocart.f90 -o CMakeFiles/packmol.dir/src/polartocart.f90.o [ 53%] Building Fortran object CMakeFiles/packmol.dir/src/resetboxes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/resetboxes.f90 -o CMakeFiles/packmol.dir/src/resetboxes.f90.o [ 56%] Building Fortran object CMakeFiles/packmol.dir/src/tobar.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/tobar.f90 -o CMakeFiles/packmol.dir/src/tobar.f90.o [ 58%] Building Fortran object CMakeFiles/packmol.dir/src/setijk.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setijk.f90 -o CMakeFiles/packmol.dir/src/setijk.f90.o [ 61%] Building Fortran object CMakeFiles/packmol.dir/src/swaptype.f90.o [ 64%] Building Fortran object CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/swaptype.f90 -o CMakeFiles/packmol.dir/src/swaptype.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computef.f90 -o CMakeFiles/packmol.dir/src/computef.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/input.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU [ 66%] Building Fortran object CMakeFiles/packmol.dir/src/computeg.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/computeg.f90 -o CMakeFiles/packmol.dir/src/computeg.f90.o [ 69%] Building Fortran object CMakeFiles/packmol.dir/src/cenmass.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/cenmass.f90 -o CMakeFiles/packmol.dir/src/cenmass.f90.o [ 71%] Building Fortran object CMakeFiles/packmol.dir/src/pgencan.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/pgencan.f90 -o CMakeFiles/packmol.dir/src/pgencan.f90.o [ 74%] Building Fortran object CMakeFiles/packmol.dir/src/initial.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/initial.f90 -o CMakeFiles/packmol.dir/src/initial.f90.o [ 76%] Building Fortran object CMakeFiles/packmol.dir/src/setsizes.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/setsizes.f90 -o CMakeFiles/packmol.dir/src/setsizes.f90.o [ 79%] Building Fortran object CMakeFiles/packmol.dir/src/getinp.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/getinp.f90 -o CMakeFiles/packmol.dir/src/getinp.f90.o [ 82%] Building Fortran object CMakeFiles/packmol.dir/src/strlength.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/strlength.f90 -o CMakeFiles/packmol.dir/src/strlength.f90.o [ 84%] Building Fortran object CMakeFiles/packmol.dir/src/output.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/output.f90 -o CMakeFiles/packmol.dir/src/output.f90.o [ 87%] Building Fortran object CMakeFiles/packmol.dir/src/checkpoint.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/checkpoint.f90 -o CMakeFiles/packmol.dir/src/checkpoint.f90.o [ 89%] Building Fortran object CMakeFiles/packmol.dir/src/writesuccess.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/writesuccess.f90 -o CMakeFiles/packmol.dir/src/writesuccess.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/app/packmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/app/packmol.f90 -o CMakeFiles/packmol.dir/app/packmol.f90.o [ 94%] Building Fortran object CMakeFiles/packmol.dir/src/restmol.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/restmol.f90 -o CMakeFiles/packmol.dir/src/restmol.f90.o [ 97%] Building Fortran object CMakeFiles/packmol.dir/src/heuristics.f90.o /usr/bin/f95 -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong -Wall -c /build/packmol-20.14.0/src/heuristics.f90 -o CMakeFiles/packmol.dir/src/heuristics.f90.o /build/packmol-20.14.0/src/getinp.f90:962:11: 962 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/getinp.f90:947:34: 947 | integer :: iread, ires, ireslast, nres, ioerr | ^ note: 'ireslast' was declared here /usr/bin/cmake -E touch CMakeFiles/packmol.dir/src/usegencan.f90.o.provides.build /build/packmol-20.14.0/src/output.f90:571:32: 571 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/output.f90:18:53: 18 | irest, iimol, ichain, iatom, irec, ilres, ifres,& | ^ note: 'ilres' was declared here /build/packmol-20.14.0/app/packmol.f90:331:50: 331 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/app/packmol.f90:50:42: 50 | integer :: i, iline, iiatom, iat, iirest, iratcount, ival | ^ note: 'iirest' was declared here /build/packmol-20.14.0/src/gencan.f:3346:72: 3346 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3238:24: 3238 | + rnorm2prev,snorm2,snorm2prev | ^ note: 'rnorm2prev' was declared here /build/packmol-20.14.0/src/gencan.f:3650:14: 3650 | if ( rbdtype .eq. 1 ) then | ^ Warning: 'rbdposatype' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3234:68: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ note: 'rbdposatype' was declared here /build/packmol-20.14.0/src/gencan.f:3234:56: 3234 | integer i,itnqmp,rbdnegaind,rbdnegatype,rbdposaind,rbdposatype | ^ Warning: 'rbdposaind' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3237:21: 3237 | + dts,dtw,gnorm2,gts,norm2s,q,qamax,qamaxn,qprev,rnorm2, | ^ note: 'dtw' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtr' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:71: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dtr' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dnorm2' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3236:67: 3236 | + amax2nx,amax2x,bb,bestprog,beta,cc,currprog,dd,dnorm2,dtr, | ^ note: 'dnorm2' was declared here /build/packmol-20.14.0/src/gencan.f:3495:72: 3495 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:49: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1n' was declared here /build/packmol-20.14.0/src/gencan.f:3494:72: 3494 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:42: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'amax1' was declared here /build/packmol-20.14.0/src/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:3235:31: 3235 | double precision aa,alpha,amax,amax1,amax1n,amaxn,amax2,amax2n, | ^ note: 'alpha' was declared here /build/packmol-20.14.0/src/gencan.f:2074:72: 2074 | lamspg = sts / sty | ^ Warning: 'sty' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:41: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sty' was declared here /build/packmol-20.14.0/src/gencan.f:2137:72: 2137 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized [-Wmaybe-uninitialized] /build/packmol-20.14.0/src/gencan.f:1677:37: 1677 | + kappa,lamspg,ometa2,sts,sty,xnorm | ^ note: 'sts' was declared here [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -g -O2 -ffile-prefix-map=/build/packmol-20.14.0=. -fstack-protector-strong CMakeFiles/packmol.dir/src/exit_codes.f90.o CMakeFiles/packmol.dir/src/cenmass.f90.o CMakeFiles/packmol.dir/src/gencan.f.o CMakeFiles/packmol.dir/src/pgencan.f90.o CMakeFiles/packmol.dir/src/initial.f90.o CMakeFiles/packmol.dir/src/title.f90.o CMakeFiles/packmol.dir/src/setsizes.f90.o CMakeFiles/packmol.dir/src/getinp.f90.o CMakeFiles/packmol.dir/src/strlength.f90.o CMakeFiles/packmol.dir/src/output.f90.o CMakeFiles/packmol.dir/src/checkpoint.f90.o CMakeFiles/packmol.dir/src/writesuccess.f90.o CMakeFiles/packmol.dir/src/fparc.f90.o CMakeFiles/packmol.dir/src/gparc.f90.o CMakeFiles/packmol.dir/src/gwalls.f90.o CMakeFiles/packmol.dir/src/comprest.f90.o CMakeFiles/packmol.dir/src/comparegrad.f90.o CMakeFiles/packmol.dir/app/packmol.f90.o CMakeFiles/packmol.dir/src/polartocart.f90.o CMakeFiles/packmol.dir/src/resetboxes.f90.o CMakeFiles/packmol.dir/src/tobar.f90.o CMakeFiles/packmol.dir/src/setijk.f90.o CMakeFiles/packmol.dir/src/setibox.f90.o CMakeFiles/packmol.dir/src/restmol.f90.o CMakeFiles/packmol.dir/src/swaptype.f90.o CMakeFiles/packmol.dir/src/swaptypemod.f90.o CMakeFiles/packmol.dir/src/ahestetic.f90.o CMakeFiles/packmol.dir/src/heuristics.f90.o CMakeFiles/packmol.dir/src/flashsort.f90.o CMakeFiles/packmol.dir/src/jacobi.f90.o CMakeFiles/packmol.dir/src/random.f90.o CMakeFiles/packmol.dir/src/sizes.f90.o CMakeFiles/packmol.dir/src/usegencan.f90.o CMakeFiles/packmol.dir/src/compute_data.f90.o CMakeFiles/packmol.dir/src/flashmod.f90.o CMakeFiles/packmol.dir/src/computef.f90.o CMakeFiles/packmol.dir/src/computeg.f90.o CMakeFiles/packmol.dir/src/input.f90.o -o packmol make[3]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' [100%] Built target packmol make[2]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/packmol-20.14.0/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/packmol/ -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/packmol-20.14.0/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/packmol-20.14.0 -B/build/packmol-20.14.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/packmol-20.14.0/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/packmol-20.14.0/obj-aarch64-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.14.0-1_arm64.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.14.0-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../packmol_20.14.0-1_arm64.buildinfo dpkg-genchanges --build=binary -O../packmol_20.14.0-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/22703 and its subdirectories I: Current time: Thu May 30 14:25:37 -12 2024 I: pbuilder-time-stamp: 1717122337