I: pbuilder: network access will be disabled during build
I: Current time: Sun Jan  7 23:11:33 -12 2024
I: pbuilder-time-stamp: 1704712293
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [tnseq-transit_3.2.7-1.dsc]
I: copying [./tnseq-transit_3.2.7.orig.tar.gz]
I: copying [./tnseq-transit_3.2.7-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sat Oct 22 11:37:09 2022 
gpgv:                using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv:                issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./tnseq-transit_3.2.7-1.dsc: no acceptable signature found
dpkg-source: info: extracting tnseq-transit in tnseq-transit-3.2.7
dpkg-source: info: unpacking tnseq-transit_3.2.7.orig.tar.gz
dpkg-source: info: unpacking tnseq-transit_3.2.7-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying skip_test_requiring_non_existing_input_data.patch
dpkg-source: info: applying fix_problematic_comparison.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1438734/tmp/hooks/D02_print_environment starting
I: set
  BUILDDIR='/build/reproducible-path'
  BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
  BUILDUSERNAME='pbuilder1'
  BUILD_ARCH='arm64'
  DEBIAN_FRONTEND='noninteractive'
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
  DISTRIBUTION='bookworm'
  HOME='/root'
  HOST_ARCH='arm64'
  IFS=' 	
  '
  INVOCATION_ID='443b7e38221e4b7fb67a60ee19ca30c5'
  LANG='C'
  LANGUAGE='en_US:en'
  LC_ALL='C'
  MAIL='/var/mail/root'
  OPTIND='1'
  PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
  PBCURRENTCOMMANDLINEOPERATION='build'
  PBUILDER_OPERATION='build'
  PBUILDER_PKGDATADIR='/usr/share/pbuilder'
  PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
  PBUILDER_SYSCONFDIR='/etc'
  PPID='1438734'
  PS1='# '
  PS2='> '
  PS4='+ '
  PWD='/'
  SHELL='/bin/bash'
  SHLVL='2'
  SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.G87X5jDZ/pbuilderrc_7hqN --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.G87X5jDZ/b1 --logfile b1/build.log tnseq-transit_3.2.7-1.dsc'
  SUDO_GID='109'
  SUDO_UID='104'
  SUDO_USER='jenkins'
  TERM='unknown'
  TZ='/usr/share/zoneinfo/Etc/GMT+12'
  USER='root'
  _='/usr/bin/systemd-run'
  http_proxy='http://192.168.101.104:3128'
I: uname -a
  Linux codethink04-arm64 6.1.0-17-cloud-arm64 #1 SMP Debian 6.1.69-1 (2023-12-30) aarch64 GNU/Linux
I: ls -l /bin
  total 7104
  -rwxr-xr-x 1 root root 1346480 Apr 23  2023 bash
  -rwxr-xr-x 3 root root   67728 Sep 19  2022 bunzip2
  -rwxr-xr-x 3 root root   67728 Sep 19  2022 bzcat
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzcmp -> bzdiff
  -rwxr-xr-x 1 root root    2225 Sep 19  2022 bzdiff
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzegrep -> bzgrep
  -rwxr-xr-x 1 root root    4893 Nov 27  2021 bzexe
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzfgrep -> bzgrep
  -rwxr-xr-x 1 root root    3775 Sep 19  2022 bzgrep
  -rwxr-xr-x 3 root root   67728 Sep 19  2022 bzip2
  -rwxr-xr-x 1 root root   67664 Sep 19  2022 bzip2recover
  lrwxrwxrwx 1 root root       6 Sep 19  2022 bzless -> bzmore
  -rwxr-xr-x 1 root root    1297 Sep 19  2022 bzmore
  -rwxr-xr-x 1 root root   68536 Sep 20  2022 cat
  -rwxr-xr-x 1 root root   68616 Sep 20  2022 chgrp
  -rwxr-xr-x 1 root root   68552 Sep 20  2022 chmod
  -rwxr-xr-x 1 root root   68632 Sep 20  2022 chown
  -rwxr-xr-x 1 root root  200264 Sep 20  2022 cp
  -rwxr-xr-x 1 root root  133640 Jan  5  2023 dash
  -rwxr-xr-x 1 root root  134144 Sep 20  2022 date
  -rwxr-xr-x 1 root root  134248 Sep 20  2022 dd
  -rwxr-xr-x 1 root root  134888 Sep 20  2022 df
  -rwxr-xr-x 1 root root  200440 Sep 20  2022 dir
  -rwxr-xr-x 1 root root  141720 Mar 23  2023 dmesg
  lrwxrwxrwx 1 root root       8 Dec 19  2022 dnsdomainname -> hostname
  lrwxrwxrwx 1 root root       8 Dec 19  2022 domainname -> hostname
  -rwxr-xr-x 1 root root   68408 Sep 20  2022 echo
  -rwxr-xr-x 1 root root      41 Jan 24  2023 egrep
  -rwxr-xr-x 1 root root   68384 Sep 20  2022 false
  -rwxr-xr-x 1 root root      41 Jan 24  2023 fgrep
  -rwxr-xr-x 1 root root  134584 Mar 23  2023 findmnt
  -rwsr-xr-x 1 root root   67744 Mar 23  2023 fusermount
  -rwxr-xr-x 1 root root  198880 Jan 24  2023 grep
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 gunzip
  -rwxr-xr-x 1 root root    6447 Apr 10  2022 gzexe
  -rwxr-xr-x 1 root root   93752 Apr 10  2022 gzip
  -rwxr-xr-x 1 root root   67592 Dec 19  2022 hostname
  -rwxr-xr-x 1 root root   68664 Sep 20  2022 ln
  -rwxr-xr-x 1 root root   69208 Mar 23  2023 login
  -rwxr-xr-x 1 root root  200440 Sep 20  2022 ls
  -rwxr-xr-x 1 root root  264360 Mar 23  2023 lsblk
  -rwxr-xr-x 1 root root  134384 Sep 20  2022 mkdir
  -rwxr-xr-x 1 root root   68768 Sep 20  2022 mknod
  -rwxr-xr-x 1 root root   68472 Sep 20  2022 mktemp
  -rwxr-xr-x 1 root root   67752 Mar 23  2023 more
  -rwsr-xr-x 1 root root   67744 Mar 23  2023 mount
  -rwxr-xr-x 1 root root   67744 Mar 23  2023 mountpoint
  -rwxr-xr-x 1 root root  134728 Sep 20  2022 mv
  lrwxrwxrwx 1 root root       8 Dec 19  2022 nisdomainname -> hostname
  lrwxrwxrwx 1 root root      14 Apr  3  2023 pidof -> /sbin/killall5
  -rwxr-xr-x 1 root root   68496 Sep 20  2022 pwd
  lrwxrwxrwx 1 root root       4 Apr 23  2023 rbash -> bash
  -rwxr-xr-x 1 root root   68456 Sep 20  2022 readlink
  -rwxr-xr-x 1 root root   68592 Sep 20  2022 rm
  -rwxr-xr-x 1 root root   68480 Sep 20  2022 rmdir
  -rwxr-xr-x 1 root root   68392 Jul 28 23:46 run-parts
  -rwxr-xr-x 1 root root  134536 Jan  5  2023 sed
  lrwxrwxrwx 1 root root       4 Jan  5  2023 sh -> dash
  -rwxr-xr-x 1 root root   68432 Sep 20  2022 sleep
  -rwxr-xr-x 1 root root  134088 Sep 20  2022 stty
  -rwsr-xr-x 1 root root  133312 Mar 23  2023 su
  -rwxr-xr-x 1 root root   68448 Sep 20  2022 sync
  -rwxr-xr-x 1 root root  539896 Apr  6  2023 tar
  -rwxr-xr-x 1 root root   67904 Jul 28 23:46 tempfile
  -rwxr-xr-x 1 root root  134160 Sep 20  2022 touch
  -rwxr-xr-x 1 root root   68384 Sep 20  2022 true
  -rwxr-xr-x 1 root root   67664 Mar 23  2023 ulockmgr_server
  -rwsr-xr-x 1 root root   67744 Mar 23  2023 umount
  -rwxr-xr-x 1 root root   68416 Sep 20  2022 uname
  -rwxr-xr-x 2 root root    2346 Apr 10  2022 uncompress
  -rwxr-xr-x 1 root root  200440 Sep 20  2022 vdir
  -rwxr-xr-x 1 root root  133312 Mar 23  2023 wdctl
  lrwxrwxrwx 1 root root       8 Dec 19  2022 ypdomainname -> hostname
  -rwxr-xr-x 1 root root    1984 Apr 10  2022 zcat
  -rwxr-xr-x 1 root root    1678 Apr 10  2022 zcmp
  -rwxr-xr-x 1 root root    6460 Apr 10  2022 zdiff
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zegrep
  -rwxr-xr-x 1 root root      29 Apr 10  2022 zfgrep
  -rwxr-xr-x 1 root root    2081 Apr 10  2022 zforce
  -rwxr-xr-x 1 root root    8103 Apr 10  2022 zgrep
  -rwxr-xr-x 1 root root    2206 Apr 10  2022 zless
  -rwxr-xr-x 1 root root    1842 Apr 10  2022 zmore
  -rwxr-xr-x 1 root root    4577 Apr 10  2022 znew
I: user script /srv/workspace/pbuilder/1438734/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-python, python3-dev, python3-setuptools, python3-numpy, python3-scipy, python3-pil, python3-matplotlib, python3-sklearn, python3-statsmodels, python3-pubsub, bwa
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 18171 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on dh-python; however:
  Package dh-python is not installed.
 pbuilder-satisfydepends-dummy depends on python3-dev; however:
  Package python3-dev is not installed.
 pbuilder-satisfydepends-dummy depends on python3-setuptools; however:
  Package python3-setuptools is not installed.
 pbuilder-satisfydepends-dummy depends on python3-numpy; however:
  Package python3-numpy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-scipy; however:
  Package python3-scipy is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pil; however:
  Package python3-pil is not installed.
 pbuilder-satisfydepends-dummy depends on python3-matplotlib; however:
  Package python3-matplotlib is not installed.
 pbuilder-satisfydepends-dummy depends on python3-sklearn; however:
  Package python3-sklearn is not installed.
 pbuilder-satisfydepends-dummy depends on python3-statsmodels; however:
  Package python3-statsmodels is not installed.
 pbuilder-satisfydepends-dummy depends on python3-pubsub; however:
  Package python3-pubsub is not installed.
 pbuilder-satisfydepends-dummy depends on bwa; however:
  Package bwa is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} bwa{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} liblerc4{a} libmagic-mgc{a} libmagic1{a} libopenblas-dev{a} libopenblas-pthread-dev{a} libopenblas0{a} libopenblas0-pthread{a} libopenjp2-7{a} libpipeline1{a} libpng16-16{a} libproc2-0{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libqhull-r8.0{a} libraqm0{a} libreadline8{a} libsub-override-perl{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxsimd-dev{a} libxslt1.1{a} libxss1{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-beniget{a} python3-brotli{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-fonttools{a} python3-fs{a} python3-gast{a} python3-joblib{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-mpmath{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-patsy{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-ply{a} python3-pubsub{a} python3-pyparsing{a} python3-pythran{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sklearn{a} python3-sklearn-lib{a} python3-statsmodels{a} python3-statsmodels-lib{a} python3-sympy{a} python3-threadpoolctl{a} python3-tk{a} python3-tz{a} python3-ufolib2{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} zlib1g-dev{a} 
The following packages are RECOMMENDED but will NOT be installed:
  ca-certificates curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx psmisc python3-bottleneck python3-bs4 python3-colorama python3-cvxopt python3-html5lib python3-jinja2 python3-nose python3-numexpr python3-odf python3-olefile python3-openpyxl python3-psutil python3-pytest python3-simplejson python3-tables shared-mime-info wget xdg-user-dirs 
0 packages upgraded, 158 newly installed, 0 to remove and 0 not upgraded.
Need to get 128 MB of archives. After unpacking 709 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-minimal arm64 3.11.2-6 [806 kB]
Get: 2 http://deb.debian.org/debian bookworm/main arm64 libexpat1 arm64 2.5.0-1 [84.8 kB]
Get: 3 http://deb.debian.org/debian bookworm/main arm64 python3.11-minimal arm64 3.11.2-6 [1858 kB]
Get: 4 http://deb.debian.org/debian bookworm/main arm64 python3-minimal arm64 3.11.2-1+b1 [26.3 kB]
Get: 5 http://deb.debian.org/debian bookworm/main arm64 media-types all 10.0.0 [26.1 kB]
Get: 6 http://deb.debian.org/debian bookworm/main arm64 mailcap all 3.70+nmu1 [32.0 kB]
Get: 7 http://deb.debian.org/debian bookworm/main arm64 mime-support all 3.66 [10.9 kB]
Get: 8 http://deb.debian.org/debian bookworm/main arm64 readline-common all 8.2-1.3 [69.0 kB]
Get: 9 http://deb.debian.org/debian bookworm/main arm64 libreadline8 arm64 8.2-1.3 [155 kB]
Get: 10 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-stdlib arm64 3.11.2-6 [1747 kB]
Get: 11 http://deb.debian.org/debian bookworm/main arm64 python3.11 arm64 3.11.2-6 [572 kB]
Get: 12 http://deb.debian.org/debian bookworm/main arm64 libpython3-stdlib arm64 3.11.2-1+b1 [9296 B]
Get: 13 http://deb.debian.org/debian bookworm/main arm64 python3 arm64 3.11.2-1+b1 [26.3 kB]
Get: 14 http://deb.debian.org/debian bookworm/main arm64 tzdata all 2023c-5+deb12u1 [296 kB]
Get: 15 http://deb.debian.org/debian bookworm/main arm64 libproc2-0 arm64 2:4.0.2-3 [60.1 kB]
Get: 16 http://deb.debian.org/debian bookworm/main arm64 procps arm64 2:4.0.2-3 [698 kB]
Get: 17 http://deb.debian.org/debian bookworm/main arm64 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 18 http://deb.debian.org/debian bookworm/main arm64 libmagic-mgc arm64 1:5.44-3 [305 kB]
Get: 19 http://deb.debian.org/debian bookworm/main arm64 libmagic1 arm64 1:5.44-3 [98.5 kB]
Get: 20 http://deb.debian.org/debian bookworm/main arm64 file arm64 1:5.44-3 [42.5 kB]
Get: 21 http://deb.debian.org/debian bookworm/main arm64 gettext-base arm64 0.21-12 [159 kB]
Get: 22 http://deb.debian.org/debian bookworm/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB]
Get: 23 http://deb.debian.org/debian bookworm/main arm64 groff-base arm64 1.22.4-10 [861 kB]
Get: 24 http://deb.debian.org/debian bookworm/main arm64 bsdextrautils arm64 2.38.1-5+b1 [86.9 kB]
Get: 25 http://deb.debian.org/debian bookworm/main arm64 libpipeline1 arm64 1.5.7-1 [36.4 kB]
Get: 26 http://deb.debian.org/debian bookworm/main arm64 man-db arm64 2.11.2-2 [1369 kB]
Get: 27 http://deb.debian.org/debian bookworm/main arm64 m4 arm64 1.4.19-3 [276 kB]
Get: 28 http://deb.debian.org/debian bookworm/main arm64 autoconf all 2.71-3 [332 kB]
Get: 29 http://deb.debian.org/debian bookworm/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get: 30 http://deb.debian.org/debian bookworm/main arm64 automake all 1:1.16.5-1.3 [823 kB]
Get: 31 http://deb.debian.org/debian bookworm/main arm64 autopoint all 0.21-12 [495 kB]
Get: 32 http://deb.debian.org/debian bookworm/main arm64 libtcl8.6 arm64 8.6.13+dfsg-2 [973 kB]
Get: 33 http://deb.debian.org/debian bookworm/main arm64 libbrotli1 arm64 1.0.9-2+b6 [269 kB]
Get: 34 http://deb.debian.org/debian bookworm/main arm64 libpng16-16 arm64 1.6.39-2 [269 kB]
Get: 35 http://deb.debian.org/debian bookworm/main arm64 libfreetype6 arm64 2.12.1+dfsg-5 [369 kB]
Get: 36 http://deb.debian.org/debian bookworm/main arm64 fonts-dejavu-core all 2.37-6 [1068 kB]
Get: 37 http://deb.debian.org/debian bookworm/main arm64 fontconfig-config arm64 2.14.1-4 [315 kB]
Get: 38 http://deb.debian.org/debian bookworm/main arm64 libfontconfig1 arm64 2.14.1-4 [381 kB]
Get: 39 http://deb.debian.org/debian bookworm/main arm64 libxau6 arm64 1:1.0.9-1 [19.7 kB]
Get: 40 http://deb.debian.org/debian bookworm/main arm64 libbsd0 arm64 0.11.7-2 [115 kB]
Get: 41 http://deb.debian.org/debian bookworm/main arm64 libxdmcp6 arm64 1:1.1.2-3 [25.4 kB]
Get: 42 http://deb.debian.org/debian bookworm/main arm64 libxcb1 arm64 1.15-1 [143 kB]
Get: 43 http://deb.debian.org/debian bookworm/main arm64 libx11-data all 2:1.8.4-2+deb12u2 [292 kB]
Get: 44 http://deb.debian.org/debian bookworm/main arm64 libx11-6 arm64 2:1.8.4-2+deb12u2 [735 kB]
Get: 45 http://deb.debian.org/debian bookworm/main arm64 libxrender1 arm64 1:0.9.10-1.1 [32.0 kB]
Get: 46 http://deb.debian.org/debian bookworm/main arm64 libxft2 arm64 2.3.6-1 [58.7 kB]
Get: 47 http://deb.debian.org/debian bookworm/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB]
Get: 48 http://deb.debian.org/debian bookworm/main arm64 x11-common all 1:7.7+23 [252 kB]
Get: 49 http://deb.debian.org/debian bookworm/main arm64 libxss1 arm64 1:1.2.3-1 [17.8 kB]
Get: 50 http://deb.debian.org/debian bookworm/main arm64 libtk8.6 arm64 8.6.13-2 [729 kB]
Get: 51 http://deb.debian.org/debian bookworm/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-4.1 [540 kB]
Get: 52 http://deb.debian.org/debian bookworm/main arm64 blt arm64 2.5.3+dfsg-4.1 [14.9 kB]
Get: 53 http://deb.debian.org/debian bookworm/main arm64 bwa arm64 0.7.17-7+b2 [194 kB]
Get: 54 http://deb.debian.org/debian bookworm/main arm64 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 55 http://deb.debian.org/debian bookworm/main arm64 libtool all 2.4.7-5 [517 kB]
Get: 56 http://deb.debian.org/debian bookworm/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 57 http://deb.debian.org/debian bookworm/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 58 http://deb.debian.org/debian bookworm/main arm64 libsub-override-perl all 0.09-4 [9304 B]
Get: 59 http://deb.debian.org/debian bookworm/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 60 http://deb.debian.org/debian bookworm/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 61 http://deb.debian.org/debian bookworm/main arm64 libelf1 arm64 0.188-2.1 [173 kB]
Get: 62 http://deb.debian.org/debian bookworm/main arm64 dwz arm64 0.15-1 [101 kB]
Get: 63 http://deb.debian.org/debian bookworm/main arm64 libicu72 arm64 72.1-3 [9204 kB]
Get: 64 http://deb.debian.org/debian bookworm/main arm64 libxml2 arm64 2.9.14+dfsg-1.3~deb12u1 [619 kB]
Get: 65 http://deb.debian.org/debian bookworm/main arm64 gettext arm64 0.21-12 [1248 kB]
Get: 66 http://deb.debian.org/debian bookworm/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 67 http://deb.debian.org/debian bookworm/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 68 http://deb.debian.org/debian bookworm/main arm64 debhelper all 13.11.4 [942 kB]
Get: 69 http://deb.debian.org/debian bookworm/main arm64 python3-lib2to3 all 3.11.2-3 [76.3 kB]
Get: 70 http://deb.debian.org/debian bookworm/main arm64 python3-distutils all 3.11.2-3 [131 kB]
Get: 71 http://deb.debian.org/debian bookworm/main arm64 dh-python all 5.20230130+deb12u1 [104 kB]
Get: 72 http://deb.debian.org/debian bookworm/main arm64 fonts-lyx all 2.3.7-1 [186 kB]
Get: 73 http://deb.debian.org/debian bookworm/main arm64 libblas3 arm64 3.11.0-2 [91.4 kB]
Get: 74 http://deb.debian.org/debian bookworm/main arm64 libboost1.74-dev arm64 1.74.0+ds1-21 [9508 kB]
Get: 75 http://deb.debian.org/debian bookworm/main arm64 libboost-dev arm64 1.74.0.3 [4548 B]
Get: 76 http://deb.debian.org/debian bookworm/main arm64 libdeflate0 arm64 1.14-1 [54.3 kB]
Get: 77 http://deb.debian.org/debian bookworm/main arm64 libexpat1-dev arm64 2.5.0-1 [135 kB]
Get: 78 http://deb.debian.org/debian bookworm/main arm64 libfribidi0 arm64 1.0.8-2.1 [64.9 kB]
Get: 79 http://deb.debian.org/debian bookworm/main arm64 libgfortran5 arm64 12.2.0-14 [340 kB]
Get: 80 http://deb.debian.org/debian bookworm/main arm64 libglib2.0-0 arm64 2.74.6-2 [1310 kB]
Get: 81 http://deb.debian.org/debian bookworm/main arm64 libgraphite2-3 arm64 1.3.14-1 [75.6 kB]
Get: 82 http://deb.debian.org/debian bookworm/main arm64 libharfbuzz0b arm64 6.0.0+dfsg-3 [1914 kB]
Get: 83 http://deb.debian.org/debian bookworm/main arm64 libimagequant0 arm64 2.17.0-1 [31.3 kB]
Get: 84 http://deb.debian.org/debian bookworm/main arm64 libjbig0 arm64 2.1-6.1 [30.0 kB]
Get: 85 http://deb.debian.org/debian bookworm/main arm64 libjpeg62-turbo arm64 1:2.1.5-2 [171 kB]
Get: 86 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 87 http://deb.debian.org/debian bookworm/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 88 http://deb.debian.org/debian bookworm/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB]
Get: 89 http://deb.debian.org/debian bookworm/main arm64 libjs-sphinxdoc all 5.3.0-4 [130 kB]
Get: 90 http://deb.debian.org/debian bookworm/main arm64 libopenblas0-pthread arm64 0.3.21+ds-4 [4532 kB]
Get: 91 http://deb.debian.org/debian bookworm/main arm64 liblapack3 arm64 3.11.0-2 [1664 kB]
Get: 92 http://deb.debian.org/debian bookworm/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1 [24.9 kB]
Get: 93 http://deb.debian.org/debian bookworm/main arm64 liblcms2-2 arm64 2.14-2 [143 kB]
Get: 94 http://deb.debian.org/debian bookworm/main arm64 liblerc4 arm64 4.0.0+ds-2 [138 kB]
Get: 95 http://deb.debian.org/debian bookworm/main arm64 libopenblas0 arm64 0.3.21+ds-4 [32.6 kB]
Get: 96 http://deb.debian.org/debian bookworm/main arm64 libopenblas-pthread-dev arm64 0.3.21+ds-4 [3169 kB]
Get: 97 http://deb.debian.org/debian bookworm/main arm64 libopenblas-dev arm64 0.3.21+ds-4 [44.9 kB]
Get: 98 http://deb.debian.org/debian bookworm/main arm64 libopenjp2-7 arm64 2.5.0-2 [175 kB]
Get: 99 http://deb.debian.org/debian bookworm/main arm64 libpython3.11 arm64 3.11.2-6 [1841 kB]
Get: 100 http://deb.debian.org/debian bookworm/main arm64 zlib1g-dev arm64 1:1.2.13.dfsg-1 [913 kB]
Get: 101 http://deb.debian.org/debian bookworm/main arm64 libpython3.11-dev arm64 3.11.2-6 [4395 kB]
Get: 102 http://deb.debian.org/debian bookworm/main arm64 libpython3-dev arm64 3.11.2-1+b1 [9564 B]
Get: 103 http://deb.debian.org/debian bookworm/main arm64 libpython3-all-dev arm64 3.11.2-1+b1 [1068 B]
Get: 104 http://deb.debian.org/debian bookworm/main arm64 libqhull-r8.0 arm64 2020.2-5 [230 kB]
Get: 105 http://deb.debian.org/debian bookworm/main arm64 libraqm0 arm64 0.7.0-4.1 [10.4 kB]
Get: 106 http://deb.debian.org/debian bookworm/main arm64 libwebp7 arm64 1.2.4-0.2+deb12u1 [260 kB]
Get: 107 http://deb.debian.org/debian bookworm/main arm64 libtiff6 arm64 4.5.0-6+deb12u1 [301 kB]
Get: 108 http://deb.debian.org/debian bookworm/main arm64 libwebpdemux2 arm64 1.2.4-0.2+deb12u1 [99.3 kB]
Get: 109 http://deb.debian.org/debian bookworm/main arm64 libwebpmux3 arm64 1.2.4-0.2+deb12u1 [109 kB]
Get: 110 http://deb.debian.org/debian bookworm/main arm64 libxsimd-dev arm64 8.1.0-7 [88.8 kB]
Get: 111 http://deb.debian.org/debian bookworm/main arm64 libxslt1.1 arm64 1.1.35-1 [231 kB]
Get: 112 http://deb.debian.org/debian bookworm/main arm64 python-matplotlib-data all 3.6.3-1 [2744 kB]
Get: 113 http://deb.debian.org/debian bookworm/main arm64 python3-all arm64 3.11.2-1+b1 [1064 B]
Get: 114 http://deb.debian.org/debian bookworm/main arm64 python3.11-dev arm64 3.11.2-6 [617 kB]
Get: 115 http://deb.debian.org/debian bookworm/main arm64 python3-dev arm64 3.11.2-1+b1 [26.2 kB]
Get: 116 http://deb.debian.org/debian bookworm/main arm64 python3-all-dev arm64 3.11.2-1+b1 [1076 B]
Get: 117 http://deb.debian.org/debian bookworm/main arm64 python3-appdirs all 1.4.4-3 [13.0 kB]
Get: 118 http://deb.debian.org/debian bookworm/main arm64 python3-attr all 22.2.0-1 [65.4 kB]
Get: 119 http://deb.debian.org/debian bookworm/main arm64 python3-gast all 0.5.2-2 [9364 B]
Get: 120 http://deb.debian.org/debian bookworm/main arm64 python3-beniget all 0.4.1-3 [9920 B]
Get: 121 http://deb.debian.org/debian bookworm/main arm64 python3-brotli arm64 1.0.9-2+b6 [281 kB]
Get: 122 http://deb.debian.org/debian bookworm/main arm64 python3-pkg-resources all 66.1.1-1 [296 kB]
Get: 123 http://deb.debian.org/debian bookworm/main arm64 python3-numpy arm64 1:1.24.2-1 [4751 kB]
Get: 124 http://deb.debian.org/debian bookworm/main arm64 python3-contourpy arm64 1.0.7-1+b1 [154 kB]
Get: 125 http://deb.debian.org/debian bookworm/main arm64 python3-cycler all 0.11.0-1 [8020 B]
Get: 126 http://deb.debian.org/debian bookworm/main arm64 python3-six all 1.16.0-4 [17.5 kB]
Get: 127 http://deb.debian.org/debian bookworm/main arm64 python3-dateutil all 2.8.2-2 [78.3 kB]
Get: 128 http://deb.debian.org/debian bookworm/main arm64 python3-decorator all 5.1.1-3 [14.9 kB]
Get: 129 http://deb.debian.org/debian bookworm/main arm64 python3-ply all 3.11-5 [65.8 kB]
Get: 130 http://deb.debian.org/debian bookworm/main arm64 python3-pythran arm64 0.11.0+ds-7 [427 kB]
Get: 131 http://deb.debian.org/debian bookworm/main arm64 python3-scipy arm64 1.10.1-2 [14.2 MB]
Get: 132 http://deb.debian.org/debian bookworm/main arm64 python3-ufolib2 all 0.14.0+dfsg1-1 [34.3 kB]
Get: 133 http://deb.debian.org/debian bookworm/main arm64 python3-mpmath all 1.2.1-2 [418 kB]
Get: 134 http://deb.debian.org/debian bookworm/main arm64 python3-sympy all 1.11.1-1 [4358 kB]
Get: 135 http://deb.debian.org/debian bookworm/main arm64 python3-tz all 2022.7.1-4 [30.1 kB]
Get: 136 http://deb.debian.org/debian bookworm/main arm64 python3-fs all 2.4.16-2 [95.2 kB]
Get: 137 http://deb.debian.org/debian bookworm/main arm64 python3-lxml arm64 4.9.2-1+b1 [1074 kB]
Get: 138 http://deb.debian.org/debian bookworm/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b2 [25.0 kB]
Get: 139 http://deb.debian.org/debian bookworm/main arm64 unicode-data all 15.0.0-1 [7984 kB]
Get: 140 http://deb.debian.org/debian bookworm/main arm64 python3-fonttools arm64 4.38.0-1+b1 [990 kB]
Get: 141 http://deb.debian.org/debian bookworm/main arm64 python3-joblib all 1.2.0-4 [211 kB]
Get: 142 http://deb.debian.org/debian bookworm/main arm64 python3-kiwisolver arm64 1.4.4-1+b1 [55.4 kB]
Get: 143 http://deb.debian.org/debian bookworm/main arm64 python3-pil arm64 9.4.0-1.1+b1 [452 kB]
Get: 144 http://deb.debian.org/debian bookworm/main arm64 python3-tk arm64 3.11.2-3 [97.7 kB]
Get: 145 http://deb.debian.org/debian bookworm/main arm64 python3-pil.imagetk arm64 9.4.0-1.1+b1 [74.4 kB]
Get: 146 http://deb.debian.org/debian bookworm/main arm64 python3-pyparsing all 3.0.9-1 [138 kB]
Get: 147 http://deb.debian.org/debian bookworm/main arm64 python3-packaging all 23.0-1 [32.5 kB]
Get: 148 http://deb.debian.org/debian bookworm/main arm64 python3-matplotlib arm64 3.6.3-1+b1 [6774 kB]
Get: 149 http://deb.debian.org/debian bookworm/main arm64 python3-pandas-lib arm64 1.5.3+dfsg-2 [3048 kB]
Get: 150 http://deb.debian.org/debian bookworm/main arm64 python3-pandas all 1.5.3+dfsg-2 [2885 kB]
Get: 151 http://deb.debian.org/debian bookworm/main arm64 python3-patsy all 0.5.3-1 [173 kB]
Get: 152 http://deb.debian.org/debian bookworm/main arm64 python3-pubsub all 4.0.3-7 [46.7 kB]
Get: 153 http://deb.debian.org/debian bookworm/main arm64 python3-setuptools all 66.1.1-1 [521 kB]
Get: 154 http://deb.debian.org/debian bookworm/main arm64 python3-threadpoolctl all 3.1.0-1 [21.2 kB]
Get: 155 http://deb.debian.org/debian bookworm/main arm64 python3-sklearn-lib arm64 1.2.1+dfsg-1 [2227 kB]
Get: 156 http://deb.debian.org/debian bookworm/main arm64 python3-sklearn all 1.2.1+dfsg-1 [2103 kB]
Get: 157 http://deb.debian.org/debian bookworm/main arm64 python3-statsmodels-lib arm64 0.13.5+dfsg-7 [1128 kB]
Get: 158 http://deb.debian.org/debian bookworm/main arm64 python3-statsmodels all 0.13.5+dfsg-7 [4515 kB]
Fetched 128 MB in 1s (197 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpython3.11-minimal:arm64.
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Unpacking libpython3.11-minimal:arm64 (3.11.2-6) ...
Selecting previously unselected package libexpat1:arm64.
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Unpacking libexpat1:arm64 (2.5.0-1) ...
Selecting previously unselected package python3.11-minimal.
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Unpacking python3.11-minimal (3.11.2-6) ...
Setting up libpython3.11-minimal:arm64 (3.11.2-6) ...
Setting up libexpat1:arm64 (2.5.0-1) ...
Setting up python3.11-minimal (3.11.2-6) ...
Selecting previously unselected package python3-minimal.
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Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_arm64.deb ...
Unpacking python3-minimal (3.11.2-1+b1) ...
Selecting previously unselected package media-types.
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Unpacking media-types (10.0.0) ...
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Unpacking mailcap (3.70+nmu1) ...
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Unpacking mime-support (3.66) ...
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Unpacking readline-common (8.2-1.3) ...
Selecting previously unselected package libreadline8:arm64.
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Unpacking libreadline8:arm64 (8.2-1.3) ...
Selecting previously unselected package libpython3.11-stdlib:arm64.
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Unpacking libpython3.11-stdlib:arm64 (3.11.2-6) ...
Selecting previously unselected package python3.11.
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Unpacking python3.11 (3.11.2-6) ...
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Unpacking libpython3-stdlib:arm64 (3.11.2-1+b1) ...
Setting up python3-minimal (3.11.2-1+b1) ...
Selecting previously unselected package python3.
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Unpacking python3 (3.11.2-1+b1) ...
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Unpacking tzdata (2023c-5+deb12u1) ...
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Unpacking libproc2-0:arm64 (2:4.0.2-3) ...
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Unpacking procps (2:4.0.2-3) ...
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Unpacking sensible-utils (0.0.17+nmu1) ...
Selecting previously unselected package libmagic-mgc.
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Unpacking libmagic-mgc (1:5.44-3) ...
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Unpacking libmagic1:arm64 (1:5.44-3) ...
Selecting previously unselected package file.
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Unpacking file (1:5.44-3) ...
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Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:arm64.
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Unpacking libuchardet0:arm64 (0.0.7-1) ...
Selecting previously unselected package groff-base.
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Unpacking groff-base (1.22.4-10) ...
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Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:arm64.
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Unpacking libpipeline1:arm64 (1.5.7-1) ...
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Unpacking man-db (2.11.2-2) ...
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Unpacking m4 (1.4.19-3) ...
Selecting previously unselected package autoconf.
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Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
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Unpacking autotools-dev (20220109.1) ...
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Unpacking automake (1:1.16.5-1.3) ...
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Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libtcl8.6:arm64.
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Unpacking libbrotli1:arm64 (1.0.9-2+b6) ...
Selecting previously unselected package libpng16-16:arm64.
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Unpacking libpng16-16:arm64 (1.6.39-2) ...
Selecting previously unselected package libfreetype6:arm64.
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Unpacking libfreetype6:arm64 (2.12.1+dfsg-5) ...
Selecting previously unselected package fonts-dejavu-core.
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Unpacking fonts-dejavu-core (2.37-6) ...
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Unpacking fontconfig-config (2.14.1-4) ...
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Unpacking libfontconfig1:arm64 (2.14.1-4) ...
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Unpacking libxau6:arm64 (1:1.0.9-1) ...
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Unpacking libbsd0:arm64 (0.11.7-2) ...
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Unpacking libxdmcp6:arm64 (1:1.1.2-3) ...
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Unpacking libxcb1:arm64 (1.15-1) ...
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Unpacking libx11-data (2:1.8.4-2+deb12u2) ...
Selecting previously unselected package libx11-6:arm64.
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Unpacking libx11-6:arm64 (2:1.8.4-2+deb12u2) ...
Selecting previously unselected package libxrender1:arm64.
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Unpacking libxrender1:arm64 (1:0.9.10-1.1) ...
Selecting previously unselected package libxft2:arm64.
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Unpacking libxft2:arm64 (2.3.6-1) ...
Selecting previously unselected package libxext6:arm64.
Preparing to unpack .../034-libxext6_2%3a1.3.4-1+b1_arm64.deb ...
Unpacking libxext6:arm64 (2:1.3.4-1+b1) ...
Selecting previously unselected package x11-common.
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Unpacking x11-common (1:7.7+23) ...
Selecting previously unselected package libxss1:arm64.
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Unpacking libxss1:arm64 (1:1.2.3-1) ...
Selecting previously unselected package libtk8.6:arm64.
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invoke-rc.d: could not determine current runlevel
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Current default time zone: 'Etc/UTC'
Local time is now:      Mon Jan  8 11:12:13 UTC 2024.
Universal Time is now:  Mon Jan  8 11:12:13 UTC 2024.
Run 'dpkg-reconfigure tzdata' if you wish to change it.

Setting up unicode-data (15.0.0-1) ...
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode
update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so.0 to provide /usr/lib/aarch64-linux-gnu/libopenblas.so.0 (libopenblas.so.0-aarch64-linux-gnu) in auto mode
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update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libblas.so to provide /usr/lib/aarch64-linux-gnu/libblas.so (libblas.so-aarch64-linux-gnu) in auto mode
update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/liblapack.so to provide /usr/lib/aarch64-linux-gnu/liblapack.so (liblapack.so-aarch64-linux-gnu) in auto mode
update-alternatives: using /usr/lib/aarch64-linux-gnu/openblas-pthread/libopenblas.so to provide /usr/lib/aarch64-linux-gnu/libopenblas.so (libopenblas.so-aarch64-linux-gnu) in auto mode
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Not building database; man-db/auto-update is not 'true'.
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Processing triggers for libc-bin (2.36-9+deb12u3) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/tnseq-transit-3.2.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S  > ../tnseq-transit_3.2.7-1_source.changes
dpkg-buildpackage: info: source package tnseq-transit
dpkg-buildpackage: info: source version 3.2.7-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Étienne Mollier <emollier@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
 debian/rules clean
dh clean --with python3 --buildsystem=pybuild
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/reproducible-path/tnseq-transit-3.2.7'
dh_auto_clean
I: pybuild base:240: python3.11 setup.py clean 
/usr/lib/python3/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
  warnings.warn(
running clean
removing '/build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build' (and everything under it)
'build/bdist.linux-arm64' does not exist -- can't clean it
'build/scripts-3.11' does not exist -- can't clean it
rm -rf tests_invalid_data
rm -rf tnseq_transit.egg-info
make[1]: Leaving directory '/build/reproducible-path/tnseq-transit-3.2.7'
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --with python3 --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/reproducible-path/tnseq-transit-3.2.7'
mkdir -p tests_invalid_data
mv tests/H37Rv.fna tests_invalid_data
dh_auto_configure
I: pybuild base:240: python3.11 setup.py config 
/usr/lib/python3/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
  warnings.warn(
running config
make[1]: Leaving directory '/build/reproducible-path/tnseq-transit-3.2.7'
   dh_auto_build -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py build 
/usr/lib/python3/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
  warnings.warn(
running build
running build_py
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/view_trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/transit_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/transit_gui.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/tnseq_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/stat_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/qcDisplay.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/norm_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/images.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/fileDisplay.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/draw_trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/__main__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
copying src/pytransit/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/tpp_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/tpp_gui.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/__main__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp
copying src/pytpp/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/prot_table.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/mean_counts.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/igv.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/combined_wig.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
copying src/pytransit/export/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/gff_to_prot_table.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert
copying src/pytransit/convert/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/zinb.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/utest.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/ttnfitness.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/tnseq_stats.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/tn5gaps.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/resampling.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/rankproduct.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/pathway_enrichment.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/normalize.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/norm.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/hmm.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/heatmap.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/gumbel.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/griffin.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/gi.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/example.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/corrplot.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/binomial.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/anova.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
copying src/pytransit/analysis/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis
running egg_info
creating tnseq_transit.egg-info
writing tnseq_transit.egg-info/PKG-INFO
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing requirements to tnseq_transit.egg-info/requires.txt
writing top-level names to tnseq_transit.egg-info/top_level.txt
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
adding license file 'LICENSE.md'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'pytransit.data' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'pytransit.data' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'pytransit.data' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'pytransit.data' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'pytransit.genomes' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'pytransit.genomes' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'pytransit.genomes' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'pytransit.genomes' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs-3-11-18.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_associated_Rvs.csv -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_term_names.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/GO_terms_for_each_Rv.obo-3-11-18.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_GO_terms.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/H37Rv_sanger_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/README.md -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_merged.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep1.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep2.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_H37Rv_rep3.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/cholesterol_glycerol_combined.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/gene_ontology.1_2.3-11-18.obo -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_merged.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep1.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/glycerol_H37Rv_rep2.wig -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_covar.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/samples_metadata_cg_interactions.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/sanger_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/smeg_COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
copying src/pytransit/data/smeg_GO_terms.txt -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data
creating /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/BCG.fna -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/BCG.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.fna -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37Rv.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.fna -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvBD_mod3.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.fna -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/H37RvMA2.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/genomes.html -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.fna -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
copying src/pytransit/genomes/mc2_155_tamu.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes
   debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/tnseq-transit-3.2.7'
dh_auto_test -- --system=custom --test-args="PYTHONPATH=tests {interpreter} -m unittest -v tests/*.py"
I: pybuild base:240: PYTHONPATH=tests python3.11 -m unittest -v tests/*.py
test_Binomial (tests.test_analysis_methods.TestMethods.test_Binomial) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback


####################
tests.test_analysis_methods.TestMethods.test_Binomial
####################
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[binomial] Running Binomial Method...  24.6%   
[binomial] Running Binomial Method...  24.7%   
[binomial] Running Binomial Method...  24.8%   
[binomial] Running Binomial Method...  24.9%   
[binomial] Running Binomial Method...  25.0%   
[binomial] Running Binomial Method...  25.1%   
[binomial] Running Binomial Method...  25.2%   
[binomial] Running Binomial Method...  25.3%   
[binomial] Running Binomial Method...  25.4%   
[binomial] Running Binomial Method...  25.5%   
[binomial] Running Binomial Method...  25.5%   
[binomial] Running Binomial Method...  25.6%   
[binomial] Running Binomial Method...  25.7%   
[binomial] Running Binomial Method...  25.8%   
[binomial] Running Binomial Method...  25.9%   
[binomial] Running Binomial Method...  26.0%   
[binomial] Running Binomial Method...  26.1%   
[binomial] Running Binomial Method...  26.2%   
[binomial] Running Binomial Method...  26.3%   
[binomial] Running Binomial Method...  26.4%   
[binomial] Running Binomial Method...  26.5%   
[binomial] Running Binomial Method...  26.5%   
[binomial] Running Binomial Method...  26.6%   
[binomial] Running Binomial Method...  26.7%   
[binomial] Running Binomial Method...  26.8%   
[binomial] Running Binomial Method...  26.9%   
[binomial] Running Binomial Method...  27.0%   
[binomial] Running Binomial Method...  27.1%   
[binomial] Running Binomial Method...  27.2%   
[binomial] Running Binomial Method...  27.3%   
[binomial] Running Binomial Method...  27.4%   
[binomial] Running Binomial Method...  27.5%   
[binomial] Running Binomial Method...  27.5%   
[binomial] Running Binomial Method...  27.6%   
[binomial] Running Binomial Method...  27.7%   
[binomial] Running Binomial Method...  27.8%   
[binomial] Running Binomial Method...  27.9%   
[binomial] Running Binomial Method...  28.0%   
[binomial] Running Binomial Method...  28.1%   
[binomial] Running Binomial Method...  28.2%   
[binomial] Running Binomial Method...  28.3%   
[binomial] Running Binomial Method...  28.4%   
[binomial] Running Binomial Method...  28.5%   
[binomial] Running Binomial Method...  28.5%   
[binomial] Running Binomial Method...  28.6%   
[binomial] Running Binomial Method...  28.7%   
[binomial] Running Binomial Method...  28.8%   
[binomial] Running Binomial Method...  28.9%   
[binomial] Running Binomial Method...  29.0%   
[binomial] Running Binomial Method...  29.1%   
[binomial] Running Binomial Method...  29.2%   
[binomial] Running Binomial Method...  29.3%   
[binomial] Running Binomial Method...  29.4%   
[binomial] Running Binomial Method...  29.5%   
[binomial] Running Binomial Method...  29.5%   
[binomial] Running Binomial Method...  29.6%   
[binomial] Running Binomial Method...  29.7%   
[binomial] Running Binomial Method...  29.8%   
[binomial] Running Binomial Method...  29.9%   
[binomial] Running Binomial Method...  30.0%   
[binomial] Running Binomial Method...  30.1%   
[binomial] Running Binomial Method...  30.2%   
[binomial] Running Binomial Method...  30.3%   
[binomial] Running Binomial Method...  30.4%   
[binomial] Running Binomial Method...  30.5%   
[binomial] Running Binomial Method...  30.5%   
[binomial] Running Binomial Method...  30.6%   
[binomial] Running Binomial Method...  30.7%   
[binomial] Running Binomial Method...  30.8%   
[binomial] Running Binomial Method...  30.9%   
[binomial] Running Binomial Method...  31.0%   
[binomial] Running Binomial Method...  31.1%   
[binomial] Running Binomial Method...  31.2%   
[binomial] Running Binomial Method...  31.3%   
[binomial] Running Binomial Method...  31.4%   
[binomial] Running Binomial Method...  31.5%   
[binomial] Running Binomial Method...  31.5%   
[binomial] Running Binomial Method...  31.6%   
[binomial] Running Binomial Method...  31.7%   
[binomial] Running Binomial Method...  31.8%   
[binomial] Running Binomial Method...  31.9%   
[binomial] Running Binomial Method...  32.0%   
[binomial] Running Binomial Method...  32.1%   
[binomial] Running Binomial Method...  32.2%   
[binomial] Running Binomial Method...  32.3%   
[binomial] Running Binomial Method...  32.4%   
[binomial] Running Binomial Method...  32.5%   
[binomial] Running Binomial Method...  32.5%   
[binomial] Running Binomial Method...  32.6%   
[binomial] Running Binomial Method...  32.7%   
[binomial] Running Binomial Method...  32.8%   
[binomial] Running Binomial Method...  32.9%   
[binomial] Running Binomial Method...  33.0%   
[binomial] Running Binomial Method...  33.1%   
[binomial] Running Binomial Method...  33.2%   
[binomial] Running Binomial Method...  33.3%   
[binomial] Running Binomial Method...  33.4%   
[binomial] Running Binomial Method...  33.5%   
[binomial] Running Binomial Method...  33.5%   
[binomial] Running Binomial Method...  33.6%   
[binomial] Running Binomial Method...  33.7%   
[binomial] Running Binomial Method...  33.8%   
[binomial] Running Binomial Method...  33.9%   
[binomial] Running Binomial Method...  34.0%   
[binomial] Running Binomial Method...  34.1%   
[binomial] Running Binomial Method...  34.2%   
[binomial] Running Binomial Method...  34.3%   
[binomial] Running Binomial Method...  34.4%   
[binomial] Running Binomial Method...  34.5%   
[binomial] Running Binomial Method...  34.5%   
[binomial] Running Binomial Method...  34.6%   
[binomial] Running Binomial Method...  34.7%   
[binomial] Running Binomial Method...  34.8%   
[binomial] Running Binomial Method...  34.9%   
[binomial] Running Binomial Method...  35.0%   
[binomial] Running Binomial Method...  35.1%   
[binomial] Running Binomial Method...  35.2%   
[binomial] Running Binomial Method...  35.3%   
[binomial] Running Binomial Method...  35.4%   
[binomial] Running Binomial Method...  35.5%   
[binomial] Running Binomial Method...  35.5%   
[binomial] Running Binomial Method...  35.6%   
[binomial] Running Binomial Method...  35.7%   
[binomial] Running Binomial Method...  35.8%   
[binomial] Running Binomial Method...  35.9%   
[binomial] Running Binomial Method...  36.0%   
[binomial] Running Binomial Method...  36.1%   
[binomial] Running Binomial Method...  36.2%   
[binomial] Running Binomial Method...  36.3%   
[binomial] Running Binomial Method...  36.4%   
[binomial] Running Binomial Method...  36.5%   
[binomial] Running Binomial Method...  36.5%   
[binomial] Running Binomial Method...  36.6%   
[binomial] Running Binomial Method...  36.7%   
[binomial] Running Binomial Method...  36.8%   
[binomial] Running Binomial Method...  36.9%   
[binomial] Running Binomial Method...  37.0%   
[binomial] Running Binomial Method...  37.1%   
[binomial] Running Binomial Method...  37.2%   
[binomial] Running Binomial Method...  37.3%   
[binomial] Running Binomial Method...  37.4%   
[binomial] Running Binomial Method...  37.5%   
[binomial] Running Binomial Method...  37.5%   
[binomial] Running Binomial Method...  37.6%   
[binomial] Running Binomial Method...  37.7%   
[binomial] Running Binomial Method...  37.8%   
[binomial] Running Binomial Method...  37.9%   
[binomial] Running Binomial Method...  38.0%   
[binomial] Running Binomial Method...  38.1%   
[binomial] Running Binomial Method...  38.2%   
[binomial] Running Binomial Method...  38.3%   
[binomial] Running Binomial Method...  38.4%   
[binomial] Running Binomial Method...  38.5%   
[binomial] Running Binomial Method...  38.5%   
[binomial] Running Binomial Method...  38.6%   
[binomial] Running Binomial Method...  38.7%   
[binomial] Running Binomial Method...  38.8%   
[binomial] Running Binomial Method...  38.9%   
[binomial] Running Binomial Method...  39.0%   
[binomial] Running Binomial Method...  39.1%   
[binomial] Running Binomial Method...  39.2%   
[binomial] Running Binomial Method...  39.3%   
[binomial] Running Binomial Method...  39.4%   
[binomial] Running Binomial Method...  39.5%   
[binomial] Running Binomial Method...  39.5%   
[binomial] Running Binomial Method...  39.6%   
[binomial] Running Binomial Method...  39.7%   
[binomial] Running Binomial Method...  39.8%   
[binomial] Running Binomial Method...  39.9%   
[binomial] Running Binomial Method...  40.0%   
[binomial] Running Binomial Method...  40.1%   
[binomial] Running Binomial Method...  40.2%   
[binomial] Running Binomial Method...  40.3%   
[binomial] Running Binomial Method...  40.4%   
[binomial] Running Binomial Method...  40.5%   
[binomial] Running Binomial Method...  40.5%   
[binomial] Running Binomial Method...  40.6%   
[binomial] Running Binomial Method...  40.7%   
[binomial] Running Binomial Method...  40.8%   
[binomial] Running Binomial Method...  40.9%   
[binomial] Running Binomial Method...  41.0%   
[binomial] Running Binomial Method...  41.1%   
[binomial] Running Binomial Method...  41.2%   
[binomial] Running Binomial Method...  41.3%   
[binomial] Running Binomial Method...  41.4%   
[binomial] Running Binomial Method...  41.5%   
[binomial] Running Binomial Method...  41.5%   
[binomial] Running Binomial Method...  41.6%   
[binomial] Running Binomial Method...  41.7%   
[binomial] Running Binomial Method...  41.8%   
[binomial] Running Binomial Method...  41.9%   
[binomial] Running Binomial Method...  42.0%   
[binomial] Running Binomial Method...  42.1%   
[binomial] Running Binomial Method...  42.2%   
[binomial] Running Binomial Method...  42.3%   
[binomial] Running Binomial Method...  42.4%   
[binomial] Running Binomial Method...  42.5%   
[binomial] Running Binomial Method...  42.5%   
[binomial] Running Binomial Method...  42.6%   
[binomial] Running Binomial Method...  42.7%   
[binomial] Running Binomial Method...  42.8%   
[binomial] Running Binomial Method...  42.9%   
[binomial] Running Binomial Method...  43.0%   
[binomial] Running Binomial Method...  43.1%   
[binomial] Running Binomial Method...  43.2%   
[binomial] Running Binomial Method...  43.3%   
[binomial] Running Binomial Method...  43.4%   
[binomial] Running Binomial Method...  43.5%   
[binomial] Running Binomial Method...  43.5%   
[binomial] Running Binomial Method...  43.6%   
[binomial] Running Binomial Method...  43.7%   
[binomial] Running Binomial Method...  43.8%   
[binomial] Running Binomial Method...  43.9%   
[binomial] Running Binomial Method...  44.0%   
[binomial] Running Binomial Method...  44.1%   
[binomial] Running Binomial Method...  44.2%   
[binomial] Running Binomial Method...  44.3%   
[binomial] Running Binomial Method...  44.4%   
[binomial] Running Binomial Method...  44.5%   
[binomial] Running Binomial Method...  44.5%   
[binomial] Running Binomial Method...  44.6%   
[binomial] Running Binomial Method...  44.7%   
[binomial] Running Binomial Method...  44.8%   
[binomial] Running Binomial Method...  44.9%   
[binomial] Running Binomial Method...  45.0%   
[binomial] Running Binomial Method...  45.1%   
[binomial] Running Binomial Method...  45.2%   
[binomial] Running Binomial Method...  45.3%   
[binomial] Running Binomial Method...  45.4%   
[binomial] Running Binomial Method...  45.5%   
[binomial] Running Binomial Method...  45.5%   
[binomial] Running Binomial Method...  45.6%   
[binomial] Running Binomial Method...  45.7%   
[binomial] Running Binomial Method...  45.8%   
[binomial] Running Binomial Method...  45.9%   
[binomial] Running Binomial Method...  46.0%   
[binomial] Running Binomial Method...  46.1%   
[binomial] Running Binomial Method...  46.2%   
[binomial] Running Binomial Method...  46.3%   
[binomial] Running Binomial Method...  46.4%   
[binomial] Running Binomial Method...  46.5%   
[binomial] Running Binomial Method...  46.5%   
[binomial] Running Binomial Method...  46.6%   
[binomial] Running Binomial Method...  46.7%   
[binomial] Running Binomial Method...  46.8%   
[binomial] Running Binomial Method...  46.9%   
[binomial] Running Binomial Method...  47.0%   
[binomial] Running Binomial Method...  47.1%   
[binomial] Running Binomial Method...  47.2%   
[binomial] Running Binomial Method...  47.3%   
[binomial] Running Binomial Method...  47.4%   
[binomial] Running Binomial Method...  47.5%   
[binomial] Running Binomial Method...  47.5%   
[binomial] Running Binomial Method...  47.6%   
[binomial] Running Binomial Method...  47.7%   
[binomial] Running Binomial Method...  47.8%   
[binomial] Running Binomial Method...  47.9%   
[binomial] Running Binomial Method...  48.0%   
[binomial] Running Binomial Method...  48.1%   
[binomial] Running Binomial Method...  48.2%   
[binomial] Running Binomial Method...  48.3%   
[binomial] Running Binomial Method...  48.4%   
[binomial] Running Binomial Method...  48.5%   
[binomial] Running Binomial Method...  48.5%   
[binomial] Running Binomial Method...  48.6%   
[binomial] Running Binomial Method...  48.7%   
[binomial] Running Binomial Method...  48.8%   
[binomial] Running Binomial Method...  48.9%   
[binomial] Running Binomial Method...  49.0%   
[binomial] Running Binomial Method...  49.1%   
[binomial] Running Binomial Method...  49.2%   
[binomial] Running Binomial Method...  49.3%   
[binomial] Running Binomial Method...  49.4%   
[binomial] Running Binomial Method...  49.5%   
[binomial] Running Binomial Method...  49.5%   
[binomial] Running Binomial Method...  49.6%   
[binomial] Running Binomial Method...  49.7%   
[binomial] Running Binomial Method...  49.8%   
[binomial] Running Binomial Method...  49.9%   
[binomial] Running Binomial Method...  50.0%   
[binomial] Running Binomial Method...  50.1%   
[binomial] Running Binomial Method...  50.2%   
[binomial] Running Binomial Method...  50.3%   
[binomial] Running Binomial Method...  50.4%   
[binomial] Running Binomial Method...  50.5%   
[binomial] Running Binomial Method...  50.5%   
[binomial] Running Binomial Method...  50.6%   
[binomial] Running Binomial Method...  50.7%   
[binomial] Running Binomial Method...  50.8%   
[binomial] Running Binomial Method...  50.9%   
[binomial] Running Binomial Method...  51.0%   
[binomial] Running Binomial Method...  51.1%   
[binomial] Running Binomial Method...  51.2%   
[binomial] Running Binomial Method...  51.3%   
[binomial] Running Binomial Method...  51.4%   
[binomial] Running Binomial Method...  51.5%   
[binomial] Running Binomial Method...  51.5%   
[binomial] Running Binomial Method...  51.6%   
[binomial] Running Binomial Method...  51.7%   
[binomial] Running Binomial Method...  51.8%   
[binomial] Running Binomial Method...  51.9%   
[binomial] Running Binomial Method...  52.0%   
[binomial] Running Binomial Method...  52.1%   
[binomial] Running Binomial Method...  52.2%   
[binomial] Running Binomial Method...  52.3%   
[binomial] Running Binomial Method...  52.4%   
[binomial] Running Binomial Method...  52.5%   
[binomial] Running Binomial Method...  52.5%   
[binomial] Running Binomial Method...  52.6%   
[binomial] Running Binomial Method...  52.7%   
[binomial] Running Binomial Method...  52.8%   
[binomial] Running Binomial Method...  52.9%   
[binomial] Running Binomial Method...  53.0%   
[binomial] Running Binomial Method...  53.1%   
[binomial] Running Binomial Method...  53.2%   
[binomial] Running Binomial Method...  53.3%   
[binomial] Running Binomial Method...  53.4%   
[binomial] Running Binomial Method...  53.5%   
[binomial] Running Binomial Method...  53.5%   
[binomial] Running Binomial Method...  53.6%   
[binomial] Running Binomial Method...  53.7%   
[binomial] Running Binomial Method...  53.8%   
[binomial] Running Binomial Method...  53.9%   
[binomial] Running Binomial Method...  54.0%   
[binomial] Running Binomial Method...  54.1%   
[binomial] Running Binomial Method...  54.2%   
[binomial] Running Binomial Method...  54.3%   
[binomial] Running Binomial Method...  54.4%   
[binomial] Running Binomial Method...  54.5%   
[binomial] Running Binomial Method...  54.5%   
[binomial] Running Binomial Method...  54.6%   
[binomial] Running Binomial Method...  54.7%   
[binomial] Running Binomial Method...  54.8%   
[binomial] Running Binomial Method...  54.9%   
[binomial] Running Binomial Method...  55.0%   
[binomial] Running Binomial Method...  55.1%   
[binomial] Running Binomial Method...  55.2%   
[binomial] Running Binomial Method...  55.3%   
[binomial] Running Binomial Method...  55.4%   
[binomial] Running Binomial Method...  55.5%   
[binomial] Running Binomial Method...  55.5%   
[binomial] Running Binomial Method...  55.6%   
[binomial] Running Binomial Method...  55.7%   
[binomial] Running Binomial Method...  55.8%   
[binomial] Running Binomial Method...  55.9%   
[binomial] Running Binomial Method...  56.0%   
[binomial] Running Binomial Method...  56.1%   
[binomial] Running Binomial Method...  56.2%   
[binomial] Running Binomial Method...  56.3%   
[binomial] Running Binomial Method...  56.4%   
[binomial] Running Binomial Method...  56.5%   
[binomial] Running Binomial Method...  56.5%   
[binomial] Running Binomial Method...  56.6%   
[binomial] Running Binomial Method...  56.7%   
[binomial] Running Binomial Method...  56.8%   
[binomial] Running Binomial Method...  56.9%   
[binomial] Running Binomial Method...  57.0%   
[binomial] Running Binomial Method...  57.1%   
[binomial] Running Binomial Method...  57.2%   
[binomial] Running Binomial Method...  57.3%   
[binomial] Running Binomial Method...  57.4%   
[binomial] Running Binomial Method...  57.5%   
[binomial] Running Binomial Method...  57.5%   
[binomial] Running Binomial Method...  57.6%   
[binomial] Running Binomial Method...  57.7%   
[binomial] Running Binomial Method...  57.8%   
[binomial] Running Binomial Method...  57.9%   
[binomial] Running Binomial Method...  58.0%   
[binomial] Running Binomial Method...  58.1%   
[binomial] Running Binomial Method...  58.2%   
[binomial] Running Binomial Method...  58.3%   
[binomial] Running Binomial Method...  58.4%   
[binomial] Running Binomial Method...  58.5%   
[binomial] Running Binomial Method...  58.5%   
[binomial] Running Binomial Method...  58.6%   
[binomial] Running Binomial Method...  58.7%   
[binomial] Running Binomial Method...  58.8%   
[binomial] Running Binomial Method...  58.9%   
[binomial] Running Binomial Method...  59.0%   
[binomial] Running Binomial Method...  59.1%   
[binomial] Running Binomial Method...  59.2%   
[binomial] Running Binomial Method...  59.3%   
[binomial] Running Binomial Method...  59.4%   
[binomial] Running Binomial Method...  59.5%   
[binomial] Running Binomial Method...  59.5%   
[binomial] Running Binomial Method...  59.6%   
[binomial] Running Binomial Method...  59.7%   
[binomial] Running Binomial Method...  59.8%   
[binomial] Running Binomial Method...  59.9%   
[binomial] Running Binomial Method...  60.0%   
[binomial] Running Binomial Method...  60.1%   
[binomial] Running Binomial Method...  60.2%   
[binomial] Running Binomial Method...  60.3%   
[binomial] Running Binomial Method...  60.4%   
[binomial] Running Binomial Method...  60.5%   
[binomial] Running Binomial Method...  60.5%   
[binomial] Running Binomial Method...  60.6%   
[binomial] Running Binomial Method...  60.7%   
[binomial] Running Binomial Method...  60.8%   
[binomial] Running Binomial Method...  60.9%   
[binomial] Running Binomial Method...  61.0%   
[binomial] Running Binomial Method...  61.1%   
[binomial] Running Binomial Method...  61.2%   
[binomial] Running Binomial Method...  61.3%   
[binomial] Running Binomial Method...  61.4%   
[binomial] Running Binomial Method...  61.5%   
[binomial] Running Binomial Method...  61.5%   
[binomial] Running Binomial Method...  61.6%   
[binomial] Running Binomial Method...  61.7%   
[binomial] Running Binomial Method...  61.8%   
[binomial] Running Binomial Method...  61.9%   
[binomial] Running Binomial Method...  62.0%   
[binomial] Running Binomial Method...  62.1%   
[binomial] Running Binomial Method...  62.2%   
[binomial] Running Binomial Method...  62.3%   
[binomial] Running Binomial Method...  62.4%   
[binomial] Running Binomial Method...  62.5%   
[binomial] Running Binomial Method...  62.5%   
[binomial] Running Binomial Method...  62.6%   
[binomial] Running Binomial Method...  62.7%   
[binomial] Running Binomial Method...  62.8%   
[binomial] Running Binomial Method...  62.9%   
[binomial] Running Binomial Method...  63.0%   
[binomial] Running Binomial Method...  63.1%   
[binomial] Running Binomial Method...  63.2%   
[binomial] Running Binomial Method...  63.3%   
[binomial] Running Binomial Method...  63.4%   
[binomial] Running Binomial Method...  63.5%   
[binomial] Running Binomial Method...  63.5%   
[binomial] Running Binomial Method...  63.6%   
[binomial] Running Binomial Method...  63.7%   
[binomial] Running Binomial Method...  63.8%   
[binomial] Running Binomial Method...  63.9%   
[binomial] Running Binomial Method...  64.0%   
[binomial] Running Binomial Method...  64.1%   
[binomial] Running Binomial Method...  64.2%   
[binomial] Running Binomial Method...  64.3%   
[binomial] Running Binomial Method...  64.4%   
[binomial] Running Binomial Method...  64.5%   
[binomial] Running Binomial Method...  64.5%   
[binomial] Running Binomial Method...  64.6%   
[binomial] Running Binomial Method...  64.7%   
[binomial] Running Binomial Method...  64.8%   
[binomial] Running Binomial Method...  64.9%   
[binomial] Running Binomial Method...  65.0%   
[binomial] Running Binomial Method...  65.1%   
[binomial] Running Binomial Method...  65.2%   
[binomial] Running Binomial Method...  65.3%   
[binomial] Running Binomial Method...  65.4%   
[binomial] Running Binomial Method...  65.5%   
[binomial] Running Binomial Method...  65.5%   
[binomial] Running Binomial Method...  65.6%   
[binomial] Running Binomial Method...  65.7%   
[binomial] Running Binomial Method...  65.8%   
[binomial] Running Binomial Method...  65.9%   
[binomial] Running Binomial Method...  66.0%   
[binomial] Running Binomial Method...  66.1%   
[binomial] Running Binomial Method...  66.2%   
[binomial] Running Binomial Method...  66.3%   
[binomial] Running Binomial Method...  66.4%   
[binomial] Running Binomial Method...  66.5%   
[binomial] Running Binomial Method...  66.5%   
[binomial] Running Binomial Method...  66.6%   
[binomial] Running Binomial Method...  66.7%   
[binomial] Running Binomial Method...  66.8%   
[binomial] Running Binomial Method...  66.9%   
[binomial] Running Binomial Method...  67.0%   
[binomial] Running Binomial Method...  67.1%   
[binomial] Running Binomial Method...  67.2%   
[binomial] Running Binomial Method...  67.3%   
[binomial] Running Binomial Method...  67.4%   
[binomial] Running Binomial Method...  67.5%   
[binomial] Running Binomial Method...  67.5%   
[binomial] Running Binomial Method...  67.6%   
[binomial] Running Binomial Method...  67.7%   
[binomial] Running Binomial Method...  67.8%   
[binomial] Running Binomial Method...  67.9%   
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ok
test_GI (tests.test_analysis_methods.TestMethods.test_GI) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[binomial] 
[binomial] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[binomial] Finished Binomial Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_GI
####################
[gi] Starting Genetic Interactions Method
[gi] Getting Data
[gi] Normalizing using: TTR
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[gi] Running GI Method... 80%   
[gi] analyzing Rv2958c (80.0% done)
[gi] Running GI Method... 82%   
[gi] analyzing Rv3552 (82.0% done)
[gi] Running GI Method... 84%   
[gi] analyzing Rv0129c (84.0% done)
[gi] Running GI Method... 86%   
[gi] analyzing Rv1821 (86.0% done)
[gi] Running GI Method... 88%   
[gi] analyzing Rv2224c (88.0% done)
[gi] Running GI Method... 90%   
[gi] analyzing Rv3567c (90.0% done)
[gi] Running GI Method... 92%   
[gi] analyzing Rv0924c (92.0% done)
[gi] Running GI Method... 94%   
[gi] analyzing Rv0249c (94.0% done)
[gi] Running GI Method... 96%   
[gi] analyzing Rv2021c (96.0% done)
[gi] Running GI Method... 98%   
[gi] analyzing Rv2694c (98.0% done)
[gi] Running GI Method... 100%   
/usr/lib/python3.11/unittest/case.py:579: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt' mode='w' encoding='UTF-8'>
  if method() is not None:
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_Griffin (tests.test_analysis_methods.TestMethods.test_Griffin) ... [gi] analyzing Rv3586 (100.0% done)
[gi] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[gi] Finished Genetic Interactions Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_Griffin
####################
[griffin] Starting Griffin Method
[griffin] Getting Data
[griffin] Running Griffin Method...   2.0%   
[griffin] Running Griffin Method...   3.9%   
[griffin] Running Griffin Method...   5.9%   
[griffin] Running Griffin Method...   7.8%   
[griffin] Running Griffin Method...   9.8%   
[griffin] Running Griffin Method...  11.8%   
[griffin] Running Griffin Method...  13.7%   
[griffin] Running Griffin Method...  15.7%   
[griffin] Running Griffin Method...  17.6%   
[griffin] Running Griffin Method...  19.6%   
[griffin] Running Griffin Method...  21.6%   
[griffin] Running Griffin Method...  23.5%   
[griffin] Running Griffin Method...  25.5%   
[griffin] Running Griffin Method...  27.5%   
[griffin] Running Griffin Method...  29.4%   
[griffin] Running Griffin Method...  31.4%   
[griffin] Running Griffin Method...  33.3%   
[griffin] Running Griffin Method...  35.3%   
[griffin] Running Griffin Method...  37.3%   
[griffin] Running Griffin Method...  39.2%   
[griffin] Running Griffin Method...  41.2%   
[griffin] Running Griffin Method...  43.1%   
[griffin] Running Griffin Method...  45.1%   
[griffin] Running Griffin Method...  47.1%   
[griffin] Running Griffin Method...  49.0%   
[griffin] Running Griffin Method...  51.0%   
[griffin] Running Griffin Method...  52.9%   
[griffin] Running Griffin Method...  54.9%   
[griffin] Running Griffin Method...  56.9%   
[griffin] Running Griffin Method...  58.8%   
[griffin] Running Griffin Method...  60.8%   
[griffin] Running Griffin Method...  62.7%   
[griffin] Running Griffin Method...  64.7%   
[griffin] Running Griffin Method...  66.7%   
[griffin] Running Griffin Method...  68.6%   
[griffin] Running Griffin Method...  70.6%   
[griffin] Running Griffin Method...  72.5%   
[griffin] Running Griffin Method...  74.5%   
[griffin] Running Griffin Method...  76.5%   
[griffin] Running Griffin Method...  78.4%   
[griffin] Running Griffin Method...  80.4%   
[griffin] Running Griffin Method...  82.4%   
[griffin] Running Griffin Method...  84.3%   
[griffin] Running Griffin Method...  86.3%   
[griffin] Running Griffin Method...  88.2%   
[griffin] Running Griffin Method...  90.2%   
[griffin] Running Griffin Method...  92.2%   
[griffin] Running Griffin Method...  94.1%   
[griffin] Running Griffin Method...  96.1%   
[griffin] Running Griffin Method...  98.0%   
[griffin] Running Griffin Method... 100.0%   
ok
test_Gumbel (tests.test_analysis_methods.TestMethods.test_Gumbel) ... [griffin] 
[griffin] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[griffin] Finished Griffin Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_Gumbel
####################
[gumbel] Reading Annotation
[gumbel] Getting Data
[gumbel] Doing Regression
[gumbel] Setting Initial Class
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   0.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   1.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   2.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   3.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   4.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   5.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   6.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   7.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   8.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...   9.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  10.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  11.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  12.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  13.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  14.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  15.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  16.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  17.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  18.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  19.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  20.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  21.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  22.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  23.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  24.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  25.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  26.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  27.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  28.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  29.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  30.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  31.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  32.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  33.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  34.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  35.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  36.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  37.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  38.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  39.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  40.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  41.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  42.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  43.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  44.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  45.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  46.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  47.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  48.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  49.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  50.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  51.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  52.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  53.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  54.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  55.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  56.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  57.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  58.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  59.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  60.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  61.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  62.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  63.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  64.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  65.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  66.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  67.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  68.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  69.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  70.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  71.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  72.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  73.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  74.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  75.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  76.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  77.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  78.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  79.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  80.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  81.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  82.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  83.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  84.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  85.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  86.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  87.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  88.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  89.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  90.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  91.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  92.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  93.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  94.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  95.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  96.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  97.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  98.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.0%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.1%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.2%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.3%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.4%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.5%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.6%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.7%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.8%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls...  99.9%   
[gumbel] Running Gumbel Method with Binomial Essentiality Calls... 100.0%   
ok
test_HMM (tests.test_analysis_methods.TestMethods.test_HMM) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/analysis/hmm.py:194: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.wig' mode='r' encoding='UTF-8'>
  T = len([1 for line in open(ctrldata[0]).readlines() if not line.startswith("#")])
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[gumbel] 
[gumbel] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[gumbel] Finished Gumbel Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_HMM
####################
[hmm] Starting HMM Method
[hmm] Getting Data
[hmm] Normalizing using: TTR
[hmm] Running HMM Method...   2.5%   
[hmm] Running HMM Method...   5.0%   
[hmm] Running HMM Method...   7.5%   
[hmm] Running HMM Method...  10.0%   
[hmm] Running HMM Method...  12.5%   
[hmm] Running HMM Method...  15.0%   
[hmm] Running HMM Method...  17.5%   
[hmm] Running HMM Method...  20.0%   
[hmm] Running HMM Method...  22.5%   
[hmm] Running HMM Method...  25.0%   
[hmm] Running HMM Method...  27.5%   
[hmm] Running HMM Method...  30.0%   
[hmm] Running HMM Method...  32.5%   
[hmm] Running HMM Method...  35.0%   
[hmm] Running HMM Method...  37.5%   
[hmm] Running HMM Method...  40.0%   
[hmm] Running HMM Method...  42.5%   
[hmm] Running HMM Method...  45.0%   
[hmm] Running HMM Method...  47.5%   
[hmm] Running HMM Method...  50.0%   
[hmm] Running HMM Method... 50.0%   
[hmm] Running HMM Method... 52.5%   
[hmm] Running HMM Method... 55.0%   
[hmm] Running HMM Method... 57.5%   
[hmm] Running HMM Method... 60.0%   
[hmm] Running HMM Method... 62.5%   
[hmm] Running HMM Method... 65.0%   
[hmm] Running HMM Method... 67.5%   
[hmm] Running HMM Method... 70.0%   
[hmm] Running HMM Method... 72.5%   
[hmm] Running HMM Method... 75.0%   
[hmm] Running HMM Method... 77.5%   
[hmm] Running HMM Method... 80.0%   
[hmm] Running HMM Method... 82.5%   
[hmm] Running HMM Method... 85.0%   
[hmm] Running HMM Method... 87.5%   
[hmm] Running HMM Method... 90.0%   
[hmm] Running HMM Method... 92.5%   
[hmm] Running HMM Method... 95.0%   
[hmm] Running HMM Method... 97.5%   
ok
test_anova (tests.test_analysis_methods.TestMethods.test_anova) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:84: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/samples_metadata_cg.txt' mode='r' encoding='UTF-8'>
  for line in open(metadata_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:124: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[hmm] 
[hmm] Finished HMM - Sites Method
[hmm] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[hmm] Creating HMM Genes Level Output
[hmm] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput_genes.txt
[hmm] Finished HMM Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_anova
####################
[anova] Starting Anova analysis
[anova] Getting Data
[anova] Normalizing using: TTR
[anova] Running Anova
[anova] Running Anova Method...   2.0%   
[anova] Running Anova Method...   3.9%   
[anova] Running Anova Method...   5.9%   
[anova] Running Anova Method...   7.8%   
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[anova] Running Anova Method...  25.5%   
[anova] Running Anova Method...  27.5%   
[anova] Running Anova Method...  29.4%   
[anova] Running Anova Method...  31.4%   
[anova] Running Anova Method...  33.3%   
[anova] Running Anova Method...  35.3%   
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[anova] Running Anova Method...  39.2%   
[anova] Running Anova Method...  41.2%   
[anova] Running Anova Method...  43.1%   
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[anova] Running Anova Method...  92.2%   
[anova] Running Anova Method...  94.1%   
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[anova] Running Anova Method...  98.0%   
[anova] Running Anova Method... 100.0%   
/build/reproducible-path/tnseq-transit-3.2.7/tests/transit_test.py:89: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt' mode='r' encoding='UTF-8'>
  for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling (tests.test_analysis_methods.TestMethods.test_resampling) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/glycerol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:913: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep1.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep2.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:930: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/cholesterol_H37Rv_rep3.wig' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table' mode='r' encoding='UTF-8'>
  for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[anova] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[anova] Finished Anova analysis
[anova] Time: 0.3s

Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_resampling
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Performing LOESS Correction
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Performing LOESS Correction
[resampling] Running Resampling Method...   2.0%   
[resampling] Running Resampling Method...   3.9%   
[resampling] Running Resampling Method...   5.9%   
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/build/reproducible-path/tnseq-transit-3.2.7/tests/transit_test.py:89: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt' mode='r' encoding='UTF-8'>
  for line in open(fname):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling_adaptive (tests.test_analysis_methods.TestMethods.test_resampling_adaptive) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 34
[resampling] Time: 10.05s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_resampling_adaptive
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method...   2.0%   
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[resampling] Running Resampling Method... 100.0%   
ok
test_resampling_combined_wig (tests.test_analysis_methods.TestMethods.test_resampling_combined_wig) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:84: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/data/samples_metadata_cg.txt' mode='r' encoding='UTF-8'>
  for line in open(metadata_file):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 9.26s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_resampling_combined_wig
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method...   2.0%   
[resampling] Running Resampling Method...   3.9%   
[resampling] Running Resampling Method...   5.9%   
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[resampling] Running Resampling Method...  13.7%   
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[resampling] Running Resampling Method...  17.6%   
[resampling] Running Resampling Method...  19.6%   
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[resampling] Running Resampling Method...  23.5%   
[resampling] Running Resampling Method...  25.5%   
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[resampling] Running Resampling Method...  31.4%   
[resampling] Running Resampling Method...  33.3%   
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[resampling] Running Resampling Method...  98.0%   
[resampling] Running Resampling Method... 100.0%   
ok
test_resampling_histogram (tests.test_analysis_methods.TestMethods.test_resampling_histogram) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 10.62s
[resampling] Finished resampling Method
36
35
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_resampling_histogram
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: TTR
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: TTR
[resampling] Running Resampling Method...   2.0%   
[resampling] Running Resampling Method...   3.9%   
[resampling] Running Resampling Method...   5.9%   
[resampling] Running Resampling Method...   7.8%   
[resampling] Running Resampling Method...   9.8%   
[resampling] Running Resampling Method...  11.8%   
[resampling] Running Resampling Method...  13.7%   
[resampling] Running Resampling Method...  15.7%   
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[resampling] Running Resampling Method...  23.5%   
[resampling] Running Resampling Method...  25.5%   
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[resampling] Running Resampling Method...  29.4%   
[resampling] Running Resampling Method...  31.4%   
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[resampling] Running Resampling Method...  98.0%   
[resampling] Running Resampling Method... 100.0%   
ok
test_resampling_multistrain (tests.test_analysis_methods.TestMethods.test_resampling_multistrain) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 35
[resampling] Time: 30.57s
[resampling] Finished resampling Method
Removing histogram files
Removing output file...


####################
tests.test_analysis_methods.TestMethods.test_resampling_multistrain
####################
[resampling] site_restricted=False
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[resampling] Getting Data
[resampling] Multiple annotation files found
[resampling] Mapping ctrl data to /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table, exp data to /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test.prot_table
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test_utest (tests.test_analysis_methods.TestMethods.test_utest) ... [resampling] 
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[resampling] Time: 45.83s
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Removing histogram files
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####################
tests.test_analysis_methods.TestMethods.test_utest
####################
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ok
test_zinb (tests.test_analysis_methods.TestMethods.test_zinb) ... skipped 'requires R, rpy2'
test_zinb_covariates (tests.test_analysis_methods.TestMethods.test_zinb_covariates) ... skipped 'requires R, rpy2'
test_zinb_interactions (tests.test_analysis_methods.TestMethods.test_zinb_interactions) ... skipped 'requires R, rpy2'
test_TTR (tests.test_norm_methods.TestNormMethods.test_TTR) ... ok
test_nonorm (tests.test_norm_methods.TestNormMethods.test_nonorm) ... ok
test_resampling_NZMean (tests.test_norm_methods.TestNormMethods.test_resampling_NZMean) ... [utest] 
[utest] Performing Benjamini-Hochberg Correction
[utest] Adding File: /build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt
[utest] Finished Mann-Whitney U-test Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_TTR
####################


####################
tests.test_norm_methods.TestNormMethods.test_nonorm
####################


####################
tests.test_norm_methods.TestNormMethods.test_resampling_NZMean
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: nzmean
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test_resampling_Quantile (tests.test_norm_methods.TestNormMethods.test_resampling_Quantile) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 2.99s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_resampling_Quantile
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: quantile
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/build/reproducible-path/tnseq-transit-3.2.7/tests/transit_test.py:75: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/testoutput.txt' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_resampling_TTR (tests.test_norm_methods.TestNormMethods.test_resampling_TTR) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 3.68s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_resampling_TTR
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
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ok
test_resampling_TotReads (tests.test_norm_methods.TestNormMethods.test_resampling_TotReads) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 2.74s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_resampling_TotReads
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: totreads
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[resampling] Normalizing using: totreads
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ok
test_resampling_ZINFNB (tests.test_norm_methods.TestNormMethods.test_resampling_ZINFNB) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 3.10s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_resampling_ZINFNB
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Normalizing using: zinfnb
[resampling] Preprocessing Exp data...
[resampling] Normalizing using: zinfnb
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[resampling] Running Resampling Method... 100.0%   
ok
test_resampling_nonorm (tests.test_norm_methods.TestNormMethods.test_resampling_nonorm) ... [resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 8.42s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_norm_methods.TestNormMethods.test_resampling_nonorm
####################
[resampling] site_restricted=False
[resampling] Starting resampling Method
[resampling] Getting Data
[resampling] Preprocessing Ctrl data...
[resampling] Preprocessing Exp data...
[resampling] Running Resampling Method...   2.0%   
[resampling] Running Resampling Method...   3.9%   
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ok
test_cleanargs_flag_arguments_w_quotes (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_w_quotes) ... ok
test_cleanargs_flag_arguments_with_double_dash (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_with_double_dash) ... ok
test_cleanargs_flag_without_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_without_arguments) ... ok
test_cleanargs_negative_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_negative_arguments) ... ok
test_cleanargs_positional_arguments (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments) ... ok
test_cleanargs_positional_arguments_w_quotes (tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments_w_quotes) ... ok
test_file_types (tests.test_pytransit_tools.TestTnSeqTools.test_file_types) ... ok
test_genes_creation_fromdata (tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromdata) ... /build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1290: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:1217: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
  for line in open(path):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/tnseq_tools.py:521: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytransit/genomes/H37Rv.prot_table' mode='r' encoding='UTF-8'>
  for line in open(self.annotation):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
ok
test_genes_creation_fromwig (tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromwig) ... ok
test_normalization (tests.test_pytransit_tools.TestTnSeqTools.test_normalization) ... ok
test_read_data (tests.test_pytransit_tools.TestTnSeqTools.test_read_data) ... ok
test_tpp_flag_primer (tests.test_tpp.TestTPP.test_tpp_flag_primer) ... skipped 'requires local data file'
test_tpp_multicontig_auto_replicon_ids (tests.test_tpp.TestTPP.test_tpp_multicontig_auto_replicon_ids) ... [tn_preprocess] running pre-processing on /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq and 
[tn_preprocess] protocol: Sassetti
[tn_preprocess] transposon type: Himar1
[tn_preprocess] One reference genome specified: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna, containing 3 records.
[tn_preprocess] Autogenerating replicon_ids...
[tn_preprocess] extracting reads...
[tn_preprocess] fastq2reads: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq -> /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.reads1
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:85: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq' mode='r' encoding='UTF-8'>
  for line in open(infile):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] assuming single-ended reads
[tn_preprocess] creating /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1
[tn_preprocess] prefix sequence: 
[tn_preprocess] Looking for start of Tn prefix within P,Q = [0,20]
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:285: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.reads1' mode='r' encoding='UTF-8'>
  for line in open(infile):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] mapping reads using BWA...(this takes a couple of minutes)
[tn_preprocess] /usr/bin/bwa index /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna
b'[bwa_index] Pack FASTA... 0.03 sec'
b'[bwa_index] Construct BWT for the packed sequence...'
b'[bwa_index] 2.12 seconds elapse.'
b'[bwa_index] Update BWT... 0.02 sec'
b'[bwa_index] Pack forward-only FASTA... 0.02 sec'
b'[bwa_index] Construct SA from BWT and Occ... 1.28 sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa index /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna'
b'[main] Real time: 8.686 sec; CPU: 3.481 sec'
b''
[tn_preprocess] /usr/bin/bwa mem /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1 > /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.sam
b'[M::bwa_idx_load_from_disk] read 0 ALT contigs'
b'[M::process] read 2500 sequences (304052 bp)...'
b'[M::mem_process_seqs] Processed 2500 reads in 0.203 CPU sec, 0.448 real sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa mem /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1'
b'[main] Real time: 0.488 sec; CPU: 0.213 sec'
b''
[tn_preprocess] tabulating template counts and statistics for reference genome /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:387: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna' mode='r' encoding='UTF-8'>
  for line in open(filename):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:569: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.sam' mode='r' encoding='UTF-8'>
  for line in open(sam):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_1.wig
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_2.wig
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_3.wig
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:1113: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.reads1' mode='r' encoding='UTF-8'>
  read_length = get_read_length(vars.base + ".reads1")
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:1114: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1' mode='r' encoding='UTF-8'>
  mean_r1_genomic = get_genomic_portion(vars.base + ".trimmed1")
ResourceWarning: Enable tracemalloc to get the object allocation traceback
/build/reproducible-path/tnseq-transit-3.2.7/tests/../src/pytpp/tpp_tools.py:1192: ResourceWarning: unclosed file <_io.TextIOWrapper name='/build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1' mode='r' encoding='UTF-8'>
  for line in open(vars.trimmed1):
ResourceWarning: Enable tracemalloc to get the object allocation traceback
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.tn_stats
[tn_preprocess] Done.
ok
test_tpp_multicontig_empty_prefix (tests.test_tpp.TestTPP.test_tpp_multicontig_empty_prefix) ... [tn_preprocess] running pre-processing on /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq and 
[tn_preprocess] protocol: Sassetti
[tn_preprocess] transposon type: Himar1
[tn_preprocess] One reference genome specified: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna, containing 3 records.
[tn_preprocess] extracting reads...
[tn_preprocess] fastq2reads: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq -> /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.reads1
[tn_preprocess] assuming single-ended reads
[tn_preprocess] creating /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1
[tn_preprocess] prefix sequence: 
[tn_preprocess] Looking for start of Tn prefix within P,Q = [0,20]
[tn_preprocess] mapping reads using BWA...(this takes a couple of minutes)
[tn_preprocess] /usr/bin/bwa mem /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1 > /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.sam
b'[M::bwa_idx_load_from_disk] read 0 ALT contigs'
b'[M::process] read 2500 sequences (304052 bp)...'
b'[M::mem_process_seqs] Processed 2500 reads in 0.212 CPU sec, 0.589 real sec'
b'[main] Version: 0.7.17-r1188'
b'[main] CMD: /usr/bin/bwa mem /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.trimmed1'
b'[main] Real time: 0.618 sec; CPU: 0.221 sec'
b''
[tn_preprocess] tabulating template counts and statistics for reference genome /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_a.wig
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_b.wig
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp_c.wig
[tn_preprocess] writing /build/reproducible-path/tnseq-transit-3.2.7/tests/test_tpp_temp.tn_stats
[tn_preprocess] Done.
ok
test_tpp_noflag_primer (tests.test_tpp.TestTPP.test_tpp_noflag_primer) ... skipped 'requires local data file'
test_tpp_protocol_mme1 (tests.test_tpp.TestTPP.test_tpp_protocol_mme1) ... skipped 'requires local data file'

----------------------------------------------------------------------
Ran 39 tests in 194.863s

OK (skipped=6)
[resampling] 
[resampling] Performing Benjamini-Hochberg Correction
[resampling] Number of significant conditionally essential genes (Padj<0.05): 0
[resampling] Time: 2.83s
[resampling] Finished resampling Method
Removing output file...


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_w_quotes
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_arguments_with_double_dash
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_flag_without_arguments
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_negative_arguments
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_cleanargs_positional_arguments_w_quotes
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_file_types
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromdata
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_genes_creation_fromwig
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_normalization
####################


####################
tests.test_pytransit_tools.TestTnSeqTools.test_read_data
####################


####################
tests.test_tpp.TestTPP.test_tpp_multicontig_auto_replicon_ids
####################
# title: Tn-Seq Pre-Processor
# date: 01/07/2024 23:16:15
# command: python python3.11 -m unittest -v tests/test_analysis_methods.py tests/test_norm_methods.py tests/test_pytransit_tools.py tests/test_tpp.py tests/transit_test.py
# transposon type: Himar1
# protocol type: Sassetti
# bwa flags:
# read1: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq
# read2:
# ref_genome: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna
# replicon_ids: 1,2,3
# total_reads (or read pairs): 2500
# truncated_reads 156 (genomic inserts shorter than the read length; ADAP2 appears in read1)
# trimmed_reads (reads with valid Tn prefix, and insert size>20bp): 2512
# reads1_mapped: 2116
# reads2_mapped: 0
# mapped_reads (both R1 and R2 map into genome, and R2 has a proper barcode): 2116
# read_count (TA sites only, for Himar1):
#   1: 63
#   2: 0
#   3: 0
# template_count:
#   1: 63
#   2: 0
#   3: 0
# template_ratio (reads per template):
#   1: 1.00
#   2: 0.00
#   3: 0.00
# TA_sites:
#   1: 89994
#   2: 646
#   3: 664
# TAs_hit:
#   1: 63
#   2: 0
#   3: 0
# density:
#   1: 0.001
#   2: 0.000
#   3: 0.000
# max_count (among templates):
#   1: 1
#   2: 0
#   3: 0
# max_site (coordinate):
#   1: 4977050
#   2: 57441
#   3: 38111
# NZ_mean (among templates):
#   1: 1.0
#   2: 0.0
#   3: 0.0
# FR_corr (Fwd templates vs. Rev templates):
#   1: -0.000
#   2: nan
#   3: nan
# BC_corr (reads vs. templates, summed over both strands):
#   1: nan
#   2: nan
#   3: nan
# Break-down of total reads (2500):
#  -12 reads (-0.5%) lack the expected Tn prefix
# Break-down of trimmed reads with valid Tn prefix (2500):
#  primer_matches: 36 reads (1.4%) contain CTAGAGGGCCCAATTCGCCCTATAGTGAGT (Himar1)
#  vector_matches: 36 reads (1.4%) contain CTAGACCGTCCAGTCTGGCAGGCCGGAAAC (phiMycoMarT7)
#  adapter_matches: 14 reads (0.6%) contain GATCGGAAGAGCACACGTCTGAACTCCAGTCAC (Illumina/TruSeq index)
#  misprimed_reads: 17 reads (0.7%) contain Himar1 prefix but don't end in TGTTA
# read_length: 125 bp
# mean_R1_genomic_length: 121.6 bp
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file


####################
tests.test_tpp.TestTPP.test_tpp_multicontig_empty_prefix
####################
# title: Tn-Seq Pre-Processor
# date: 01/07/2024 23:16:19
# command: python python3.11 -m unittest -v tests/test_analysis_methods.py tests/test_norm_methods.py tests/test_pytransit_tools.py tests/test_tpp.py tests/transit_test.py
# transposon type: Himar1
# protocol type: Sassetti
# bwa flags:
# read1: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig-1.fastq
# read2:
# ref_genome: /build/reproducible-path/tnseq-transit-3.2.7/tests/data/test-multicontig.fna
# replicon_ids: a,b,c
# total_reads (or read pairs): 2500
# truncated_reads 156 (genomic inserts shorter than the read length; ADAP2 appears in read1)
# trimmed_reads (reads with valid Tn prefix, and insert size>20bp): 2512
# reads1_mapped: 2116
# reads2_mapped: 0
# mapped_reads (both R1 and R2 map into genome, and R2 has a proper barcode): 2116
# read_count (TA sites only, for Himar1):
#   a: 63
#   b: 0
#   c: 0
# template_count:
#   a: 63
#   b: 0
#   c: 0
# template_ratio (reads per template):
#   a: 1.00
#   b: 0.00
#   c: 0.00
# TA_sites:
#   a: 89994
#   b: 646
#   c: 664
# TAs_hit:
#   a: 63
#   b: 0
#   c: 0
# density:
#   a: 0.001
#   b: 0.000
#   c: 0.000
# max_count (among templates):
#   a: 1
#   b: 0
#   c: 0
# max_site (coordinate):
#   a: 4977050
#   b: 57441
#   c: 38111
# NZ_mean (among templates):
#   a: 1.0
#   b: 0.0
#   c: 0.0
# FR_corr (Fwd templates vs. Rev templates):
#   a: -0.000
#   b: nan
#   c: nan
# BC_corr (reads vs. templates, summed over both strands):
#   a: nan
#   b: nan
#   c: nan
# Break-down of total reads (2500):
#  -12 reads (-0.5%) lack the expected Tn prefix
# Break-down of trimmed reads with valid Tn prefix (2500):
#  primer_matches: 36 reads (1.4%) contain CTAGAGGGCCCAATTCGCCCTATAGTGAGT (Himar1)
#  vector_matches: 36 reads (1.4%) contain CTAGACCGTCCAGTCTGGCAGGCCGGAAAC (phiMycoMarT7)
#  adapter_matches: 14 reads (0.6%) contain GATCGGAAGAGCACACGTCTGAACTCCAGTCAC (Illumina/TruSeq index)
#  misprimed_reads: 17 reads (0.7%) contain Himar1 prefix but don't end in TGTTA
# read_length: 125 bp
# mean_R1_genomic_length: 121.6 bp
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
Removing tpp test file
make[1]: Leaving directory '/build/reproducible-path/tnseq-transit-3.2.7'
   create-stamp debian/debhelper-build-stamp
   dh_testroot -O--buildsystem=pybuild
   dh_prep -O--buildsystem=pybuild
   dh_auto_install --destdir=debian/tnseq-transit/ -O--buildsystem=pybuild
I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit 
/usr/lib/python3/dist-packages/setuptools/dist.py:775: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
  warnings.warn(
running install
/usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
running build
running build_py
running egg_info
writing tnseq_transit.egg-info/PKG-INFO
writing dependency_links to tnseq_transit.egg-info/dependency_links.txt
writing entry points to tnseq_transit.egg-info/entry_points.txt
writing requirements to tnseq_transit.egg-info/requires.txt
writing top-level names to tnseq_transit.egg-info/top_level.txt
reading manifest file 'tnseq_transit.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
warning: no files found matching 'VERSION'
warning: no files found matching '*.html' under directory 'src/pytransit/doc/build/html'
warning: no files found matching '*.png' under directory 'src/pytransit/doc/build/html/_images'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_modules'
warning: no files found matching '*' under directory 'src/pytransit/doc/build/html/_static'
adding license file 'LICENSE.md'
writing manifest file 'tnseq_transit.egg-info/SOURCES.txt'
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'pytransit.data' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'pytransit.data' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'pytransit.data' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'pytransit.data' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
/usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning:     Installing 'pytransit.genomes' as data is deprecated, please list it in `packages`.
    !!


    ############################
    # Package would be ignored #
    ############################
    Python recognizes 'pytransit.genomes' as an importable package,
    but it is not listed in the `packages` configuration of setuptools.

    'pytransit.genomes' has been automatically added to the distribution only
    because it may contain data files, but this behavior is likely to change
    in future versions of setuptools (and therefore is considered deprecated).

    Please make sure that 'pytransit.genomes' is included as a package by using
    the `packages` configuration field or the proper discovery methods
    (for example by using `find_namespace_packages(...)`/`find_namespace:`
    instead of `find_packages(...)`/`find:`).

    You can read more about "package discovery" and "data files" on setuptools
    documentation page.


!!

  check.warn(importable)
running install_lib
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp/__main__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp/tpp_gui.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytpp/tpp_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/mc2_155_tamu.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/mc2_155_tamu.fna -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/genomes.html -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvMA2.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvMA2.fna -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD_mod3.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37RvBD.fna -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37Rv.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/H37Rv.fna -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/BCG.prot_table -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/genomes/BCG.fna -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/genomes
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/smeg_GO_terms.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/smeg_COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/sanger_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg_interactions.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg_covar.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/samples_metadata_cg.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_rep2.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_rep1.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/glycerol_H37Rv_merged.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/gene_ontology.1_2.3-11-18.obo -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_glycerol_combined.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep3.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep2.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_rep1.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/cholesterol_H37Rv_merged.wig -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/README.md -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_sanger_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_GO_terms.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv_COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/H37Rv.sanger_associated_RVS.csv -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/GO_terms_for_each_Rv.obo-3-11-18.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/GO_term_names.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/GO_associated_Rvs.csv -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/GO_associated_Rvs-3-11-18.txt -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/data/COG_roles.dat -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/data
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/anova.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/binomial.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/corrplot.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/example.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/gi.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/griffin.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/gumbel.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/heatmap.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/hmm.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/norm.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/normalize.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/pathway_enrichment.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/rankproduct.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/resampling.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/tn5gaps.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/tnseq_stats.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/ttnfitness.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/utest.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/analysis/zinb.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/convert/gff_to_prot_table.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert
creating /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/base.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/combined_wig.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/igv.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/mean_counts.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/export/prot_table.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/__init__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/__main__.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/draw_trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/fileDisplay.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/images.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/norm_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/qcDisplay.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/stat_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/tnseq_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/transit_gui.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/transit_tools.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
copying /build/reproducible-path/tnseq-transit-3.2.7/.pybuild/cpython3_3.11/build/pytransit/view_trash.py -> /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/__main__.py to __main__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/tpp_gui.py to tpp_gui.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytpp/tpp_tools.py to tpp_tools.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/anova.py to anova.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/base.py to base.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/binomial.py to binomial.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/corrplot.py to corrplot.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/example.py to example.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/gi.py to gi.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/griffin.py to griffin.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/gumbel.py to gumbel.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/heatmap.py to heatmap.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/hmm.py to hmm.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/norm.py to norm.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/normalize.py to normalize.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/pathway_enrichment.py to pathway_enrichment.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/rankproduct.py to rankproduct.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/resampling.py to resampling.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/tn5gaps.py to tn5gaps.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/tnseq_stats.py to tnseq_stats.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/ttnfitness.py to ttnfitness.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/utest.py to utest.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/analysis/zinb.py to zinb.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/base.py to base.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/convert/gff_to_prot_table.py to gff_to_prot_table.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/base.py to base.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/combined_wig.py to combined_wig.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/igv.py to igv.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/mean_counts.py to mean_counts.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/export/prot_table.py to prot_table.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/__init__.py to __init__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/__main__.py to __main__.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/draw_trash.py to draw_trash.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/fileDisplay.py to fileDisplay.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/images.py to images.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/norm_tools.py to norm_tools.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/qcDisplay.py to qcDisplay.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/stat_tools.py to stat_tools.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/tnseq_tools.py to tnseq_tools.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/transit_gui.py to transit_gui.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/transit_tools.py to transit_tools.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/trash.py to trash.cpython-311.pyc
byte-compiling /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/pytransit/view_trash.py to view_trash.cpython-311.pyc
running install_egg_info
Copying tnseq_transit.egg-info to /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/lib/python3.11/dist-packages/tnseq_transit-3.2.7.egg-info
Skipping SOURCES.txt
running install_scripts
Installing tpp script to /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/bin
Installing transit script to /build/reproducible-path/tnseq-transit-3.2.7/debian/tnseq-transit/usr/bin
   debian/rules override_dh_install
make[1]: Entering directory '/build/reproducible-path/tnseq-transit-3.2.7'
dh_install
mv debian/tnseq-transit/usr/bin/tpp debian/tnseq-transit/usr/bin/transit-tpp
make[1]: Leaving directory '/build/reproducible-path/tnseq-transit-3.2.7'
   dh_installdocs -O--buildsystem=pybuild
   dh_installchangelogs -O--buildsystem=pybuild
   dh_installman -O--buildsystem=pybuild
   dh_python3 -O--buildsystem=pybuild
   dh_installsystemduser -O--buildsystem=pybuild
   dh_perl -O--buildsystem=pybuild
   dh_link -O--buildsystem=pybuild
   dh_strip_nondeterminism -O--buildsystem=pybuild
   dh_compress -O--buildsystem=pybuild
   dh_fixperms -O--buildsystem=pybuild
   dh_missing -O--buildsystem=pybuild
   dh_dwz -a -O--buildsystem=pybuild
   dh_strip -a -O--buildsystem=pybuild
   dh_makeshlibs -a -O--buildsystem=pybuild
   dh_shlibdeps -a -O--buildsystem=pybuild
   dh_installdeb -O--buildsystem=pybuild
   dh_gencontrol -O--buildsystem=pybuild
   dh_md5sums -O--buildsystem=pybuild
   dh_builddeb -O--buildsystem=pybuild
dpkg-deb: building package 'tnseq-transit' in '../tnseq-transit_3.2.7-1_arm64.deb'.
 dpkg-genbuildinfo --build=binary -O../tnseq-transit_3.2.7-1_arm64.buildinfo
 dpkg-genchanges --build=binary -O../tnseq-transit_3.2.7-1_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: including full source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/1438734 and its subdirectories
I: Current time: Sun Jan  7 23:18:12 -12 2024
I: pbuilder-time-stamp: 1704712692