I: pbuilder: network access will be disabled during build
I: Current time: Thu May 18 11:40:10 +14 2023
I: pbuilder-time-stamp: 1684359610
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [libbio-coordinate-perl_1.7.1-4.dsc]
I: copying [./libbio-coordinate-perl_1.7.1.orig.tar.gz]
I: copying [./libbio-coordinate-perl_1.7.1-4.debian.tar.xz]
I: Extracting source
gpgv: Signature made Wed Nov 25 04:41:32 2020 +14
gpgv:                using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv:                issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libbio-coordinate-perl_1.7.1-4.dsc: no acceptable signature found
dpkg-source: info: extracting libbio-coordinate-perl in libbio-coordinate-perl-1.7.1
dpkg-source: info: unpacking libbio-coordinate-perl_1.7.1.orig.tar.gz
dpkg-source: info: unpacking libbio-coordinate-perl_1.7.1-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying spelling.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/D01_modify_environment starting
debug: Running on virt32b.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
'/bin/sh' -> '/bin/bash'
lrwxrwxrwx 1 root root 9 May 18 11:40 /bin/sh -> /bin/bash
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/D02_print_environment starting
I: set
  BASH=/bin/sh
  BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath
  BASH_ALIASES=()
  BASH_ARGC=()
  BASH_ARGV=()
  BASH_CMDS=()
  BASH_LINENO=([0]="12" [1]="0")
  BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:.
  BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
  BASH_VERSINFO=([0]="5" [1]="2" [2]="15" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
  BASH_VERSION='5.2.15(1)-release'
  BUILDDIR=/build
  BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
  BUILDUSERNAME=pbuilder2
  BUILD_ARCH=armhf
  DEBIAN_FRONTEND=noninteractive
  DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 '
  DIRSTACK=()
  DISTRIBUTION=bookworm
  EUID=0
  FUNCNAME=([0]="Echo" [1]="main")
  GROUPS=()
  HOME=/root
  HOSTNAME=i-capture-the-hostname
  HOSTTYPE=arm
  HOST_ARCH=armhf
  IFS=' 	
  '
  INVOCATION_ID=514f15725bd24b3c984a32ba855f09f4
  LANG=C
  LANGUAGE=it_CH:it
  LC_ALL=C
  MACHTYPE=arm-unknown-linux-gnueabihf
  MAIL=/var/mail/root
  OPTERR=1
  OPTIND=1
  OSTYPE=linux-gnueabihf
  PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
  PBCURRENTCOMMANDLINEOPERATION=build
  PBUILDER_OPERATION=build
  PBUILDER_PKGDATADIR=/usr/share/pbuilder
  PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
  PBUILDER_SYSCONFDIR=/etc
  PIPESTATUS=([0]="0")
  POSIXLY_CORRECT=y
  PPID=25658
  PS4='+ '
  PWD=/
  SHELL=/bin/bash
  SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
  SHLVL=3
  SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.0neYRP3M/pbuilderrc_oylf --distribution bookworm --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.0neYRP3M/b2 --logfile b2/build.log --extrapackages usrmerge libbio-coordinate-perl_1.7.1-4.dsc'
  SUDO_GID=112
  SUDO_UID=106
  SUDO_USER=jenkins
  TERM=unknown
  TZ=/usr/share/zoneinfo/Etc/GMT-14
  UID=0
  USER=root
  _='I: set'
  http_proxy=http://10.0.0.15:3142/
I: uname -a
  Linux i-capture-the-hostname 5.10.0-23-armmp-lpae #1 SMP Debian 5.10.179-1 (2023-05-12) armv7l GNU/Linux
I: ls -l /bin
  total 5072
  -rwxr-xr-x 1 root root 838488 Apr 24 11:24 bash
  -rwxr-xr-x 3 root root  67144 Sep 19  2022 bunzip2
  -rwxr-xr-x 3 root root  67144 Sep 19  2022 bzcat
  lrwxrwxrwx 1 root root      6 Sep 19  2022 bzcmp -> bzdiff
  -rwxr-xr-x 1 root root   2225 Sep 19  2022 bzdiff
  lrwxrwxrwx 1 root root      6 Sep 19  2022 bzegrep -> bzgrep
  -rwxr-xr-x 1 root root   4893 Nov 28  2021 bzexe
  lrwxrwxrwx 1 root root      6 Sep 19  2022 bzfgrep -> bzgrep
  -rwxr-xr-x 1 root root   3775 Sep 19  2022 bzgrep
  -rwxr-xr-x 3 root root  67144 Sep 19  2022 bzip2
  -rwxr-xr-x 1 root root  67112 Sep 19  2022 bzip2recover
  lrwxrwxrwx 1 root root      6 Sep 19  2022 bzless -> bzmore
  -rwxr-xr-x 1 root root   1297 Sep 19  2022 bzmore
  -rwxr-xr-x 1 root root  67632 Sep 21  2022 cat
  -rwxr-xr-x 1 root root  67676 Sep 21  2022 chgrp
  -rwxr-xr-x 1 root root  67644 Sep 21  2022 chmod
  -rwxr-xr-x 1 root root  67684 Sep 21  2022 chown
  -rwxr-xr-x 1 root root 133532 Sep 21  2022 cp
  -rwxr-xr-x 1 root root 132868 Jan  6 03:20 dash
  -rwxr-xr-x 1 root root 133220 Sep 21  2022 date
  -rwxr-xr-x 1 root root  67732 Sep 21  2022 dd
  -rwxr-xr-x 1 root root  68104 Sep 21  2022 df
  -rwxr-xr-x 1 root root 133632 Sep 21  2022 dir
  -rwxr-xr-x 1 root root  59128 Mar 23 23:02 dmesg
  lrwxrwxrwx 1 root root      8 Dec 20 03:33 dnsdomainname -> hostname
  lrwxrwxrwx 1 root root      8 Dec 20 03:33 domainname -> hostname
  -rwxr-xr-x 1 root root  67560 Sep 21  2022 echo
  -rwxr-xr-x 1 root root     41 Jan 25 04:43 egrep
  -rwxr-xr-x 1 root root  67548 Sep 21  2022 false
  -rwxr-xr-x 1 root root     41 Jan 25 04:43 fgrep
  -rwxr-xr-x 1 root root  55748 Mar 23 23:02 findmnt
  -rwsr-xr-x 1 root root  26208 Mar 23 22:15 fusermount
  -rwxr-xr-x 1 root root 128608 Jan 25 04:43 grep
  -rwxr-xr-x 2 root root   2346 Apr 10  2022 gunzip
  -rwxr-xr-x 1 root root   6447 Apr 10  2022 gzexe
  -rwxr-xr-x 1 root root  64220 Apr 10  2022 gzip
  -rwxr-xr-x 1 root root  67032 Dec 20 03:33 hostname
  -rwxr-xr-x 1 root root  67720 Sep 21  2022 ln
  -rwxr-xr-x 1 root root  35132 Mar 23 23:51 login
  -rwxr-xr-x 1 root root 133632 Sep 21  2022 ls
  -rwxr-xr-x 1 root root 136808 Mar 23 23:02 lsblk
  -rwxr-xr-x 1 root root  67800 Sep 21  2022 mkdir
  -rwxr-xr-x 1 root root  67764 Sep 21  2022 mknod
  -rwxr-xr-x 1 root root  67596 Sep 21  2022 mktemp
  -rwxr-xr-x 1 root root  38504 Mar 23 23:02 more
  -rwsr-xr-x 1 root root  38496 Mar 23 23:02 mount
  -rwxr-xr-x 1 root root   9824 Mar 23 23:02 mountpoint
  -rwxr-xr-x 1 root root 133532 Sep 21  2022 mv
  lrwxrwxrwx 1 root root      8 Dec 20 03:33 nisdomainname -> hostname
  lrwxrwxrwx 1 root root     14 Apr  3 20:25 pidof -> /sbin/killall5
  -rwxr-xr-x 1 root root  67608 Sep 21  2022 pwd
  lrwxrwxrwx 1 root root      4 Apr 24 11:24 rbash -> bash
  -rwxr-xr-x 1 root root  67600 Sep 21  2022 readlink
  -rwxr-xr-x 1 root root  67672 Sep 21  2022 rm
  -rwxr-xr-x 1 root root  67600 Sep 21  2022 rmdir
  -rwxr-xr-x 1 root root  67400 Nov  3  2022 run-parts
  -rwxr-xr-x 1 root root 133372 Jan  6 09:55 sed
  lrwxrwxrwx 1 root root      9 May 18 11:40 sh -> /bin/bash
  -rwxr-xr-x 1 root root  67584 Sep 21  2022 sleep
  -rwxr-xr-x 1 root root  67644 Sep 21  2022 stty
  -rwsr-xr-x 1 root root  50800 Mar 23 23:02 su
  -rwxr-xr-x 1 root root  67584 Sep 21  2022 sync
  -rwxr-xr-x 1 root root 336764 Apr  7 04:25 tar
  -rwxr-xr-x 1 root root  67144 Nov  3  2022 tempfile
  -rwxr-xr-x 1 root root 133224 Sep 21  2022 touch
  -rwxr-xr-x 1 root root  67548 Sep 21  2022 true
  -rwxr-xr-x 1 root root   9768 Mar 23 22:15 ulockmgr_server
  -rwsr-xr-x 1 root root  22108 Mar 23 23:02 umount
  -rwxr-xr-x 1 root root  67572 Sep 21  2022 uname
  -rwxr-xr-x 2 root root   2346 Apr 10  2022 uncompress
  -rwxr-xr-x 1 root root 133632 Sep 21  2022 vdir
  -rwxr-xr-x 1 root root  42608 Mar 23 23:02 wdctl
  lrwxrwxrwx 1 root root      8 Dec 20 03:33 ypdomainname -> hostname
  -rwxr-xr-x 1 root root   1984 Apr 10  2022 zcat
  -rwxr-xr-x 1 root root   1678 Apr 10  2022 zcmp
  -rwxr-xr-x 1 root root   6460 Apr 10  2022 zdiff
  -rwxr-xr-x 1 root root     29 Apr 10  2022 zegrep
  -rwxr-xr-x 1 root root     29 Apr 10  2022 zfgrep
  -rwxr-xr-x 1 root root   2081 Apr 10  2022 zforce
  -rwxr-xr-x 1 root root   8103 Apr 10  2022 zgrep
  -rwxr-xr-x 1 root root   2206 Apr 10  2022 zless
  -rwxr-xr-x 1 root root   1842 Apr 10  2022 zmore
  -rwxr-xr-x 1 root root   4577 Apr 10  2022 znew
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/D02_print_environment finished
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), bioperl (>= 1.7.1), perl
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19329 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
  Package debhelper-compat is not installed.
 pbuilder-satisfydepends-dummy depends on bioperl (>= 1.7.1); however:
  Package bioperl is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
  autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1{a} libexception-class-perl{a} libfile-stripnondeterminism-perl{a} libicu72{a} libio-string-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsub-override-perl{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} 
The following packages are RECOMMENDED but will NOT be installed:
  bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libclone-perl libconvert-binary-c-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libdbi-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-parser-perl libhtml-tableextract-perl libhttp-message-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl liburi-perl libwww-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libyaml-perl lynx perl-doc perl-tk wget 
0 packages upgraded, 46 newly installed, 0 to remove and 0 not upgraded.
Need to get 21.7 MB of archives. After unpacking 78.8 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main armhf sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 2 http://deb.debian.org/debian bookworm/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get: 3 http://deb.debian.org/debian bookworm/main armhf libmagic1 armhf 1:5.44-3 [96.5 kB]
Get: 4 http://deb.debian.org/debian bookworm/main armhf file armhf 1:5.44-3 [41.6 kB]
Get: 5 http://deb.debian.org/debian bookworm/main armhf gettext-base armhf 0.21-12 [157 kB]
Get: 6 http://deb.debian.org/debian bookworm/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get: 7 http://deb.debian.org/debian bookworm/main armhf groff-base armhf 1.22.4-10 [825 kB]
Get: 8 http://deb.debian.org/debian bookworm/main armhf bsdextrautils armhf 2.38.1-5+b1 [78.6 kB]
Get: 9 http://deb.debian.org/debian bookworm/main armhf libpipeline1 armhf 1.5.7-1 [33.6 kB]
Get: 10 http://deb.debian.org/debian bookworm/main armhf man-db armhf 2.11.2-2 [1351 kB]
Get: 11 http://deb.debian.org/debian bookworm/main armhf m4 armhf 1.4.19-3 [265 kB]
Get: 12 http://deb.debian.org/debian bookworm/main armhf autoconf all 2.71-3 [332 kB]
Get: 13 http://deb.debian.org/debian bookworm/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get: 14 http://deb.debian.org/debian bookworm/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get: 15 http://deb.debian.org/debian bookworm/main armhf autopoint all 0.21-12 [495 kB]
Get: 16 http://deb.debian.org/debian bookworm/main armhf libio-string-perl all 1.08-4 [12.1 kB]
Get: 17 http://deb.debian.org/debian bookworm/main armhf libdata-stag-perl all 0.14-3 [448 kB]
Get: 18 http://deb.debian.org/debian bookworm/main armhf libbio-perl-perl all 1.7.8-1 [2603 kB]
Get: 19 http://deb.debian.org/debian bookworm/main armhf libclass-data-inheritable-perl all 0.08-3 [8588 B]
Get: 20 http://deb.debian.org/debian bookworm/main armhf libdevel-stacktrace-perl all 2.0400-2 [26.8 kB]
Get: 21 http://deb.debian.org/debian bookworm/main armhf libexception-class-perl all 1.45-1 [34.6 kB]
Get: 22 http://deb.debian.org/debian bookworm/main armhf libtest-deep-perl all 1.204-1 [52.9 kB]
Get: 23 http://deb.debian.org/debian bookworm/main armhf libcapture-tiny-perl all 0.48-2 [24.6 kB]
Get: 24 http://deb.debian.org/debian bookworm/main armhf libalgorithm-diff-perl all 1.201-1 [43.3 kB]
Get: 25 http://deb.debian.org/debian bookworm/main armhf libtext-diff-perl all 1.45-2 [27.2 kB]
Get: 26 http://deb.debian.org/debian bookworm/main armhf libtest-differences-perl all 0.69-1 [18.9 kB]
Get: 27 http://deb.debian.org/debian bookworm/main armhf libsub-uplevel-perl all 0.2800-3 [14.0 kB]
Get: 28 http://deb.debian.org/debian bookworm/main armhf libtest-exception-perl all 0.43-3 [16.9 kB]
Get: 29 http://deb.debian.org/debian bookworm/main armhf libtest-warn-perl all 0.37-2 [14.5 kB]
Get: 30 http://deb.debian.org/debian bookworm/main armhf libtest-most-perl all 0.38-1 [25.1 kB]
Get: 31 http://deb.debian.org/debian bookworm/main armhf bioperl all 1.7.8-1 [246 kB]
Get: 32 http://deb.debian.org/debian bookworm/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 33 http://deb.debian.org/debian bookworm/main armhf libtool all 2.4.7-5 [517 kB]
Get: 34 http://deb.debian.org/debian bookworm/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 35 http://deb.debian.org/debian bookworm/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 36 http://deb.debian.org/debian bookworm/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get: 37 http://deb.debian.org/debian bookworm/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 38 http://deb.debian.org/debian bookworm/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 39 http://deb.debian.org/debian bookworm/main armhf libelf1 armhf 0.188-2.1 [170 kB]
Get: 40 http://deb.debian.org/debian bookworm/main armhf dwz armhf 0.15-1 [101 kB]
Get: 41 http://deb.debian.org/debian bookworm/main armhf libicu72 armhf 72.1-3 [9048 kB]
Get: 42 http://deb.debian.org/debian bookworm/main armhf libxml2 armhf 2.9.14+dfsg-1.2 [591 kB]
Get: 43 http://deb.debian.org/debian bookworm/main armhf gettext armhf 0.21-12 [1229 kB]
Get: 44 http://deb.debian.org/debian bookworm/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 45 http://deb.debian.org/debian bookworm/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 46 http://deb.debian.org/debian bookworm/main armhf debhelper all 13.11.4 [942 kB]
Fetched 21.7 MB in 2s (11.0 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sensible-utils.
(Reading database ... 
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19329 files and directories currently installed.)
Preparing to unpack .../00-sensible-utils_0.0.17+nmu1_all.deb ...
Unpacking sensible-utils (0.0.17+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../01-libmagic-mgc_1%3a5.44-3_armhf.deb ...
Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../02-libmagic1_1%3a5.44-3_armhf.deb ...
Unpacking libmagic1:armhf (1:5.44-3) ...
Selecting previously unselected package file.
Preparing to unpack .../03-file_1%3a5.44-3_armhf.deb ...
Unpacking file (1:5.44-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../04-gettext-base_0.21-12_armhf.deb ...
Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../05-libuchardet0_0.0.7-1_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../06-groff-base_1.22.4-10_armhf.deb ...
Unpacking groff-base (1.22.4-10) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../07-bsdextrautils_2.38.1-5+b1_armhf.deb ...
Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../08-libpipeline1_1.5.7-1_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../09-man-db_2.11.2-2_armhf.deb ...
Unpacking man-db (2.11.2-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../10-m4_1.4.19-3_armhf.deb ...
Unpacking m4 (1.4.19-3) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../11-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../14-autopoint_0.21-12_all.deb ...
Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libio-string-perl.
Preparing to unpack .../15-libio-string-perl_1.08-4_all.deb ...
Unpacking libio-string-perl (1.08-4) ...
Selecting previously unselected package libdata-stag-perl.
Preparing to unpack .../16-libdata-stag-perl_0.14-3_all.deb ...
Unpacking libdata-stag-perl (0.14-3) ...
Selecting previously unselected package libbio-perl-perl.
Preparing to unpack .../17-libbio-perl-perl_1.7.8-1_all.deb ...
Unpacking libbio-perl-perl (1.7.8-1) ...
Selecting previously unselected package libclass-data-inheritable-perl.
Preparing to unpack .../18-libclass-data-inheritable-perl_0.08-3_all.deb ...
Unpacking libclass-data-inheritable-perl (0.08-3) ...
Selecting previously unselected package libdevel-stacktrace-perl.
Preparing to unpack .../19-libdevel-stacktrace-perl_2.0400-2_all.deb ...
Unpacking libdevel-stacktrace-perl (2.0400-2) ...
Selecting previously unselected package libexception-class-perl.
Preparing to unpack .../20-libexception-class-perl_1.45-1_all.deb ...
Unpacking libexception-class-perl (1.45-1) ...
Selecting previously unselected package libtest-deep-perl.
Preparing to unpack .../21-libtest-deep-perl_1.204-1_all.deb ...
Unpacking libtest-deep-perl (1.204-1) ...
Selecting previously unselected package libcapture-tiny-perl.
Preparing to unpack .../22-libcapture-tiny-perl_0.48-2_all.deb ...
Unpacking libcapture-tiny-perl (0.48-2) ...
Selecting previously unselected package libalgorithm-diff-perl.
Preparing to unpack .../23-libalgorithm-diff-perl_1.201-1_all.deb ...
Unpacking libalgorithm-diff-perl (1.201-1) ...
Selecting previously unselected package libtext-diff-perl.
Preparing to unpack .../24-libtext-diff-perl_1.45-2_all.deb ...
Unpacking libtext-diff-perl (1.45-2) ...
Selecting previously unselected package libtest-differences-perl.
Preparing to unpack .../25-libtest-differences-perl_0.69-1_all.deb ...
Unpacking libtest-differences-perl (0.69-1) ...
Selecting previously unselected package libsub-uplevel-perl.
Preparing to unpack .../26-libsub-uplevel-perl_0.2800-3_all.deb ...
Unpacking libsub-uplevel-perl (0.2800-3) ...
Selecting previously unselected package libtest-exception-perl.
Preparing to unpack .../27-libtest-exception-perl_0.43-3_all.deb ...
Unpacking libtest-exception-perl (0.43-3) ...
Selecting previously unselected package libtest-warn-perl.
Preparing to unpack .../28-libtest-warn-perl_0.37-2_all.deb ...
Unpacking libtest-warn-perl (0.37-2) ...
Selecting previously unselected package libtest-most-perl.
Preparing to unpack .../29-libtest-most-perl_0.38-1_all.deb ...
Unpacking libtest-most-perl (0.38-1) ...
Selecting previously unselected package bioperl.
Preparing to unpack .../30-bioperl_1.7.8-1_all.deb ...
Unpacking bioperl (1.7.8-1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../31-libdebhelper-perl_13.11.4_all.deb ...
Unpacking libdebhelper-perl (13.11.4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../32-libtool_2.4.7-5_all.deb ...
Unpacking libtool (2.4.7-5) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../33-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../34-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../35-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../36-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../37-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../38-libelf1_0.188-2.1_armhf.deb ...
Unpacking libelf1:armhf (0.188-2.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../39-dwz_0.15-1_armhf.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:armhf.
Preparing to unpack .../40-libicu72_72.1-3_armhf.deb ...
Unpacking libicu72:armhf (72.1-3) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../41-libxml2_2.9.14+dfsg-1.2_armhf.deb ...
Unpacking libxml2:armhf (2.9.14+dfsg-1.2) ...
Selecting previously unselected package gettext.
Preparing to unpack .../42-gettext_0.21-12_armhf.deb ...
Unpacking gettext (0.21-12) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../43-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../44-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../45-debhelper_13.11.4_all.deb ...
Unpacking debhelper (13.11.4) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up bsdextrautils (2.38.1-5+b1) ...
Setting up libtest-deep-perl (1.204-1) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libalgorithm-diff-perl (1.201-1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up libmagic1:armhf (1:5.44-3) ...
Setting up gettext-base (0.21-12) ...
Setting up m4 (1.4.19-3) ...
Setting up file (1:5.44-3) ...
Setting up libio-string-perl (1.08-4) ...
Setting up autotools-dev (20220109.1) ...
Setting up libclass-data-inheritable-perl (0.08-3) ...
Setting up libtext-diff-perl (1.45-2) ...
Setting up autopoint (0.21-12) ...
Setting up autoconf (2.71-3) ...
Setting up libcapture-tiny-perl (0.48-2) ...
Setting up libdata-stag-perl (0.14-3) ...
Setting up sensible-utils (0.0.17+nmu1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libsub-uplevel-perl (0.2800-3) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libdevel-stacktrace-perl (2.0400-2) ...
Setting up libbio-perl-perl (1.7.8-1) ...
Setting up libelf1:armhf (0.188-2.1) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.2) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up gettext (0.21-12) ...
Setting up libtool (2.4.7-5) ...
Setting up libtest-warn-perl (0.37-2) ...
Setting up libtest-differences-perl (0.69-1) ...
Setting up libexception-class-perl (1.45-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up libtest-exception-perl (0.43-3) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-10) ...
Setting up libtest-most-perl (0.38-1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up man-db (2.11.2-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up bioperl (1.7.8-1) ...
Setting up debhelper (13.11.4) ...
Processing triggers for libc-bin (2.36-9) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
usrmerge is already the newest version (35).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/A99_set_merged_usr starting
Re-configuring usrmerge...
removed '/etc/unsupported-skip-usrmerge-conversion'
The system has been successfully converted.
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/A99_set_merged_usr finished
hostname: Name or service not known
I: Running cd /build/libbio-coordinate-perl-1.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S  > ../libbio-coordinate-perl_1.7.1-4_source.changes
dpkg-buildpackage: info: source package libbio-coordinate-perl
dpkg-buildpackage: info: source version 1.7.1-4
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 debian/rules clean
dh clean
   dh_clean
 debian/rules binary
dh binary
   dh_update_autotools_config
   dh_autoreconf
   dh_auto_configure
	/usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -ffile-prefix-map=/build/libbio-coordinate-perl-1.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=arm-linux-gnueabihf-gcc -g -O2 -ffile-prefix-map=/build/libbio-coordinate-perl-1.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro"
Checking if your kit is complete...
Looks good
Generating a Unix-style Makefile
Writing Makefile for Bio::Coordinate
Writing MYMETA.yml and MYMETA.json
   dh_auto_build
	make -j4
make[1]: Entering directory '/build/libbio-coordinate-perl-1.7.1'
cp lib/Bio/Coordinate/MapperI.pm blib/lib/Bio/Coordinate/MapperI.pm
cp lib/Bio/Coordinate/Chain.pm blib/lib/Bio/Coordinate/Chain.pm
cp lib/Bio/Coordinate/Result/Match.pm blib/lib/Bio/Coordinate/Result/Match.pm
cp lib/Bio/Coordinate/GeneMapper.pm blib/lib/Bio/Coordinate/GeneMapper.pm
cp lib/Bio/Coordinate/Result.pm blib/lib/Bio/Coordinate/Result.pm
cp lib/Bio/Coordinate/Graph.pm blib/lib/Bio/Coordinate/Graph.pm
cp lib/Bio/Coordinate/Collection.pm blib/lib/Bio/Coordinate/Collection.pm
cp lib/Bio/Coordinate.pm blib/lib/Bio/Coordinate.pm
cp lib/Bio/Coordinate/Utils.pm blib/lib/Bio/Coordinate/Utils.pm
cp lib/Bio/Coordinate/ExtrapolatingPair.pm blib/lib/Bio/Coordinate/ExtrapolatingPair.pm
cp lib/Bio/Coordinate/Result/Gap.pm blib/lib/Bio/Coordinate/Result/Gap.pm
cp lib/Bio/Coordinate/Pair.pm blib/lib/Bio/Coordinate/Pair.pm
cp lib/Bio/Coordinate/ResultI.pm blib/lib/Bio/Coordinate/ResultI.pm
Manifying 13 pod documents
make[1]: Leaving directory '/build/libbio-coordinate-perl-1.7.1'
   dh_auto_test
	make -j4 test TEST_VERBOSE=1
make[1]: Entering directory '/build/libbio-coordinate-perl-1.7.1'
PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t
t/00-compile.t .............. 
1..13
ok 1 - Bio/Coordinate.pm loaded ok
ok 2 - Bio/Coordinate/Chain.pm loaded ok
ok 3 - Bio/Coordinate/Collection.pm loaded ok
ok 4 - Bio/Coordinate/ExtrapolatingPair.pm loaded ok
ok 5 - Bio/Coordinate/GeneMapper.pm loaded ok
ok 6 - Bio/Coordinate/Graph.pm loaded ok
ok 7 - Bio/Coordinate/MapperI.pm loaded ok
ok 8 - Bio/Coordinate/Pair.pm loaded ok
ok 9 - Bio/Coordinate/Result.pm loaded ok
ok 10 - Bio/Coordinate/Result/Gap.pm loaded ok
ok 11 - Bio/Coordinate/Result/Match.pm loaded ok
ok 12 - Bio/Coordinate/ResultI.pm loaded ok
ok 13 - Bio/Coordinate/Utils.pm loaded ok
ok
t/author-mojibake.t ......... skipped: these tests are for testing by the author
t/author-pod-syntax.t ....... skipped: these tests are for testing by the author
t/CoordinateBoundaryTest.t .. 
1..174
ok 1 - use Bio::Location::Simple;
ok 2 - use Bio::Coordinate::Pair;
ok 3
ok 4 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 5
ok 6 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 7
ok 8 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 9
ok 10 - An object of class 'Bio::Coordinate::Pair' isa 'Bio::Coordinate::Pair'
ok 11
ok 12 - An object of class 'Bio::Coordinate::Pair' isa 'Bio::Coordinate::Pair'
ok 13
ok 14
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32 - An object of class 'Bio::Location::Simple' isa 'Bio::LocationI'
ok 33
ok 34 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 35
ok 36 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 37
ok 38
ok 39
ok 40
ok 41
ok 42
ok 43
ok 44
ok 45
ok 46
ok 47
ok 48
ok 49
ok 50 - An object of class 'Bio::Location::Simple' isa 'Bio::LocationI'
ok 51
ok 52 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 53
ok 54 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 55
ok 56
ok 57
ok 58
ok 59
ok 60
ok 61
ok 62
ok 63
ok 64
ok 65
ok 66
ok 67
ok 68 - An object of class 'Bio::Location::Simple' isa 'Bio::LocationI'
ok 69
ok 70 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 71
ok 72 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 73
ok 74
ok 75
ok 76
ok 77
ok 78
ok 79
ok 80
ok 81
ok 82
ok 83
ok 84
ok 85
ok 86
ok 87
ok 88 - An object of class 'Bio::Location::Simple' isa 'Bio::LocationI'
ok 89
ok 90 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 91
ok 92 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 93
ok 94
ok 95
ok 96
ok 97
ok 98
ok 99
ok 100
ok 101
ok 102
ok 103
ok 104
ok 105
ok 106
ok 107
ok 108 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 109
ok 110 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 111
ok 112 - An object of class 'Bio::Location::Simple' isa 'Bio::Location::Simple'
ok 113
ok 114 - An object of class 'Bio::Coordinate::Pair' isa 'Bio::Coordinate::Pair'
ok 115
ok 116 - An object of class 'Bio::Coordinate::Pair' isa 'Bio::Coordinate::Pair'
ok 117
ok 118
ok 119
ok 120
ok 121
ok 122
ok 123
ok 124
ok 125
ok 126
ok 127
ok 128
ok 129
ok 130
ok 131
ok 132 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 133
ok 134 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 135
ok 136
ok 137
ok 138
ok 139
ok 140
ok 141
ok 142 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 143
ok 144 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 145
ok 146
ok 147
ok 148
ok 149
ok 150
ok 151
ok 152 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 153
ok 154 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 155
ok 156
ok 157
ok 158
ok 159
ok 160
ok 161
ok 162
ok 163
ok 164 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 165
ok 166 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 167
ok 168
ok 169
ok 170
ok 171
ok 172
ok 173
ok 174
ok
t/CoordinateGraph.t ......... 
1..7
ok 1 - use Bio::Coordinate::Graph;
ok 2
ok 3
ok 4
ok 5
ok 6
ok 7
ok
t/CoordinateMapper.t ........ 
1..175
ok 1 - use Bio::Location::Simple;
ok 2 - use Bio::Coordinate::Pair;
ok 3 - use Bio::Coordinate::Result::Match;
ok 4 - use Bio::Coordinate::Result::Gap;
ok 5 - use Bio::Coordinate::Chain;
ok 6 - use Bio::Coordinate::Collection;
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Coordinate::Result'
ok 15 - An object of class 'Bio::Coordinate::Result' isa 'Bio::Location::SplitLocationI'
ok 16
ok 17
ok 18
ok 19 - An object of class 'Bio::Coordinate::Result::Match' isa 'Bio::LocationI'
ok 20 - An object of class 'Bio::Coordinate::Result::Match' isa 'Bio::Coordinate::Result::Match'
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok 33
ok 34
ok 35
ok 36
ok 37 - An object of class 'Bio::Coordinate::Result::Gap' isa 'Bio::Coordinate::Result::Gap'
ok 38 - An object of class 'Bio::Coordinate::Result::Gap' isa 'Bio::LocationI'
ok 39
ok 40
ok 41
ok 42
ok 43
ok 44
ok 45
ok 46
ok 47
ok 48
ok 49
ok 50
ok 51
ok 52
ok 53
ok 54
ok 55
ok 56
ok 57
ok 58
ok 59
ok 60
ok 61
ok 62
ok 63
ok 64
ok 65
ok 66
ok 67
ok 68
ok 69
ok 70
ok 71
ok 72
ok 73
ok 74
ok 75
ok 76
ok 77
ok 78
ok 79
ok 80
ok 81
ok 82
ok 83
ok 84
ok 85
ok 86
ok 87
ok 88
ok 89
ok 90
ok 91
ok 92
ok 93
ok 94
ok 95
ok 96
ok 97
ok 98
ok 99
ok 100
ok 101
ok 102
ok 103
ok 104
ok 105
ok 106 - An object of class 'Bio::Coordinate::Result::Match' isa 'Bio::Coordinate::Result::Match'
ok 107
ok 108
ok 109
ok 110
ok 111
ok 112
ok 113
ok 114
ok 115
ok 116
ok 117
ok 118
ok 119
ok 120
ok 121
ok 122
ok 123
ok 124
ok 125
ok 126
ok 127
ok 128
ok 129
ok 130
ok 131
ok 132
ok 133
ok 134
ok 135
ok 136
ok 137
ok 138 - Match: |314696| Test: 314696|
ok 139
ok 140
ok 141
ok 142 - Match: |341| Test: 341|
ok 143
ok 144
ok 145
ok 146 - Match: |315843| Test: 315843|
ok 147
ok 148
ok 149
ok 150
ok 151
ok 152 - Match: |627011| Test: 627011|
ok 153
ok 154
ok 155
ok 156 - Match: |chr1| Test: chr1|
ok 157
ok 158
ok 159
ok 160
ok 161
ok 162
ok 163
ok 164
ok 165
ok 166
ok 167
ok 168
ok 169
ok 170
ok 171
ok 172
ok 173
ok 174
ok 175
ok
t/GeneCoordinateMapper.t .... 
1..116
ok 1 - use Bio::Location::Simple;
ok 2 - use Bio::Coordinate::Pair;
ok 3 - use Bio::Coordinate::ExtrapolatingPair;
ok 4 - use Bio::Coordinate::GeneMapper;
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14 - An object of class 'Bio::Coordinate::Result::Match' isa 'Bio::Location::Simple'
ok 15
ok 16
ok 17
ok 18
ok 19
ok 20
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok 33
ok 34
ok 35
ok 36
ok 37
ok 38
ok 39
ok 40
ok 41
ok 42
ok 43
ok 44
ok 45
ok 46
ok 47
ok 48
ok 49
ok 50
ok 51
ok 52
ok 53
ok 54
ok 55
ok 56
ok 57
ok 58
ok 59
ok 60
ok 61
ok 62
ok 63
ok 64
ok 65
ok 66
ok 67
ok 68
ok 69
ok 70
ok 71
ok 72
ok 73
ok 74
ok 75 - An object of class 'Bio::Coordinate::Result::Match' isa 'Bio::Location::Simple'
ok 76
ok 77
ok 78
ok 79
ok 80
ok 81
ok 82
ok 83
ok 84
ok 85
ok 86
ok 87
ok 88
ok 89
ok 90
ok 91
ok 92
ok 93
ok 94
ok 95
ok 96
ok 97
ok 98
ok 99
ok 100
ok 101
ok 102
ok 103
ok 104
ok 105
ok 106
ok 107
ok 108
ok 109
ok 110
ok 111
ok 112
ok 113
ok 114
ok 115
ok 116
ok
t/release-eol.t ............. skipped: these tests are for release candidate testing
All tests successful.
Files=8, Tests=485,  4 wallclock secs ( 0.16 usr  0.04 sys +  3.38 cusr  0.44 csys =  4.02 CPU)
Result: PASS
make[1]: Leaving directory '/build/libbio-coordinate-perl-1.7.1'
   create-stamp debian/debhelper-build-stamp
   dh_prep
   dh_auto_install --destdir=debian/libbio-coordinate-perl/
	make -j4 install DESTDIR=/build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/build/libbio-coordinate-perl-1.7.1'
Manifying 13 pod documents
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Utils.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Pair.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/ExtrapolatingPair.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Result.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Collection.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Chain.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/MapperI.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/GeneMapper.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/ResultI.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Graph.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Result/Gap.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/perl5/Bio/Coordinate/Result/Match.pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Pair.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Result::Match.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::MapperI.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::GeneMapper.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Utils.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Result::Gap.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::ResultI.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Collection.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Result.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Graph.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::ExtrapolatingPair.3pm
Installing /build/libbio-coordinate-perl-1.7.1/debian/libbio-coordinate-perl/usr/share/man/man3/Bio::Coordinate::Chain.3pm
make[1]: Leaving directory '/build/libbio-coordinate-perl-1.7.1'
   dh_installdocs
   dh_installchangelogs
   dh_installman
   dh_perl
   dh_link
   dh_strip_nondeterminism
   dh_compress
   dh_fixperms
   dh_missing
   dh_installdeb
   dh_gencontrol
   dh_md5sums
   dh_builddeb
dpkg-deb: building package 'libbio-coordinate-perl' in '../libbio-coordinate-perl_1.7.1-4_all.deb'.
 dpkg-genbuildinfo --build=binary -O../libbio-coordinate-perl_1.7.1-4_armhf.buildinfo
 dpkg-genchanges --build=binary -O../libbio-coordinate-perl_1.7.1-4_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/25658/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env 
I: removing directory /srv/workspace/pbuilder/25658 and its subdirectories
I: Current time: Thu May 18 11:41:26 +14 2023
I: pbuilder-time-stamp: 1684359686