I: pbuilder: network access will be disabled during build
I: Current time: Sun Jan 21 15:59:07 -12 2024
I: pbuilder-time-stamp: 1705895947
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [btllib_1.4.10+dfsg-1.dsc]
I: copying [./btllib_1.4.10+dfsg.orig.tar.xz]
I: copying [./btllib_1.4.10+dfsg-1.debian.tar.xz]
I: Extracting source
gpgv: Signature made Thu Feb 2 08:24:43 2023
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./btllib_1.4.10+dfsg-1.dsc: no acceptable signature found
dpkg-source: info: extracting btllib in btllib-1.4.10+dfsg
dpkg-source: info: unpacking btllib_1.4.10+dfsg.orig.tar.xz
dpkg-source: info: unpacking btllib_1.4.10+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying find_object_files_at_right_loc.patch
dpkg-source: info: applying use_debian_packaged_libs.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/27137/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 '
DISTRIBUTION='bookworm'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
INVOCATION_ID='28fcaa43f2c24440b33fb29def3f8143'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='27137'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.D8pKN8ai/pbuilderrc_2sUD --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.D8pKN8ai/b1 --logfile b1/build.log btllib_1.4.10+dfsg-1.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://78.137.99.97:3128'
I: uname -a
Linux ionos12-i386 6.1.0-17-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.69-1 (2023-12-30) i686 GNU/Linux
I: ls -l /bin
total 6036
-rwxr-xr-x 1 root root 1408088 Apr 23 2023 bash
-rwxr-xr-x 3 root root 38404 Sep 19 2022 bunzip2
-rwxr-xr-x 3 root root 38404 Sep 19 2022 bzcat
lrwxrwxrwx 1 root root 6 Sep 19 2022 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Sep 19 2022 bzdiff
lrwxrwxrwx 1 root root 6 Sep 19 2022 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe
lrwxrwxrwx 1 root root 6 Sep 19 2022 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Sep 19 2022 bzgrep
-rwxr-xr-x 3 root root 38404 Sep 19 2022 bzip2
-rwxr-xr-x 1 root root 17892 Sep 19 2022 bzip2recover
lrwxrwxrwx 1 root root 6 Sep 19 2022 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Sep 19 2022 bzmore
-rwxr-xr-x 1 root root 42920 Sep 20 2022 cat
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp
-rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chown
-rwxr-xr-x 1 root root 162024 Sep 20 2022 cp
-rwxr-xr-x 1 root root 136916 Jan 5 2023 dash
-rwxr-xr-x 1 root root 137160 Sep 20 2022 date
-rwxr-xr-x 1 root root 100364 Sep 20 2022 dd
-rwxr-xr-x 1 root root 108940 Sep 20 2022 df
-rwxr-xr-x 1 root root 162152 Sep 20 2022 dir
-rwxr-xr-x 1 root root 87760 Mar 23 2023 dmesg
lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname
-rwxr-xr-x 1 root root 38760 Sep 20 2022 echo
-rwxr-xr-x 1 root root 41 Jan 24 2023 egrep
-rwxr-xr-x 1 root root 34664 Sep 20 2022 false
-rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep
-rwxr-xr-x 1 root root 84272 Mar 23 2023 findmnt
-rwsr-xr-x 1 root root 30240 Mar 23 2023 fusermount
-rwxr-xr-x 1 root root 218680 Jan 24 2023 grep
-rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip
-rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe
-rwxr-xr-x 1 root root 100952 Apr 10 2022 gzip
-rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname
-rwxr-xr-x 1 root root 75756 Sep 20 2022 ln
-rwxr-xr-x 1 root root 55600 Mar 23 2023 login
-rwxr-xr-x 1 root root 162152 Sep 20 2022 ls
-rwxr-xr-x 1 root root 214568 Mar 23 2023 lsblk
-rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir
-rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod
-rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp
-rwxr-xr-x 1 root root 63016 Mar 23 2023 more
-rwsr-xr-x 1 root root 58912 Mar 23 2023 mount
-rwxr-xr-x 1 root root 13856 Mar 23 2023 mountpoint
-rwxr-xr-x 1 root root 157932 Sep 20 2022 mv
lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 3 2023 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd
lrwxrwxrwx 1 root root 4 Apr 23 2023 rbash -> bash
-rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink
-rwxr-xr-x 1 root root 75720 Sep 20 2022 rm
-rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir
-rwxr-xr-x 1 root root 22308 Jul 28 23:46 run-parts
-rwxr-xr-x 1 root root 133224 Jan 5 2023 sed
lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash
-rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep
-rwxr-xr-x 1 root root 87976 Sep 20 2022 stty
-rwsr-xr-x 1 root root 83492 Mar 23 2023 su
-rwxr-xr-x 1 root root 38792 Sep 20 2022 sync
-rwxr-xr-x 1 root root 598456 Apr 6 2023 tar
-rwxr-xr-x 1 root root 13860 Jul 28 23:46 tempfile
-rwxr-xr-x 1 root root 120776 Sep 20 2022 touch
-rwxr-xr-x 1 root root 34664 Sep 20 2022 true
-rwxr-xr-x 1 root root 17892 Mar 23 2023 ulockmgr_server
-rwsr-xr-x 1 root root 30236 Mar 23 2023 umount
-rwxr-xr-x 1 root root 38760 Sep 20 2022 uname
-rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress
-rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir
-rwxr-xr-x 1 root root 71216 Mar 23 2023 wdctl
lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat
-rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp
-rwxr-xr-x 1 root root 6460 Apr 10 2022 zdiff
-rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep
-rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep
-rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce
-rwxr-xr-x 1 root root 8103 Apr 10 2022 zgrep
-rwxr-xr-x 1 root root 2206 Apr 10 2022 zless
-rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore
-rwxr-xr-x 1 root root 4577 Apr 10 2022 znew
I: user script /srv/workspace/pbuilder/27137/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), dh-exec, meson, ninja-build, libcpptoml-dev, libomp-dev, samtools
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 18156 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-exec; however:
Package dh-exec is not installed.
pbuilder-satisfydepends-dummy depends on meson; however:
Package meson is not installed.
pbuilder-satisfydepends-dummy depends on ninja-build; however:
Package ninja-build is not installed.
pbuilder-satisfydepends-dummy depends on libcpptoml-dev; however:
Package libcpptoml-dev is not installed.
pbuilder-satisfydepends-dummy depends on libomp-dev; however:
Package libomp-dev is not installed.
pbuilder-satisfydepends-dummy depends on samtools; however:
Package samtools is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libbsd0{a} libcpptoml-dev{a} libcurl3-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libhts3{a} libhtscodecs2{a} libicu72{a} libldap-2.5-0{a} libllvm14{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libomp-14-dev{a} libomp-dev{a} libomp5-14{a} libpipeline1{a} libpsl5{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libz3-4{a} m4{a} man-db{a} media-types{a} meson{a} ninja-build{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} samtools{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget
0 packages upgraded, 70 newly installed, 0 to remove and 0 not upgraded.
Need to get 63.0 MB of archives. After unpacking 261 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main i386 libpython3.11-minimal i386 3.11.2-6 [813 kB]
Get: 2 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB]
Get: 3 http://deb.debian.org/debian bookworm/main i386 python3.11-minimal i386 3.11.2-6 [2130 kB]
Get: 4 http://deb.debian.org/debian bookworm/main i386 python3-minimal i386 3.11.2-1+b1 [26.3 kB]
Get: 5 http://deb.debian.org/debian bookworm/main i386 media-types all 10.0.0 [26.1 kB]
Get: 6 http://deb.debian.org/debian bookworm/main i386 readline-common all 8.2-1.3 [69.0 kB]
Get: 7 http://deb.debian.org/debian bookworm/main i386 libreadline8 i386 8.2-1.3 [171 kB]
Get: 8 http://deb.debian.org/debian bookworm/main i386 libpython3.11-stdlib i386 3.11.2-6 [1799 kB]
Get: 9 http://deb.debian.org/debian bookworm/main i386 python3.11 i386 3.11.2-6 [572 kB]
Get: 10 http://deb.debian.org/debian bookworm/main i386 libpython3-stdlib i386 3.11.2-1+b1 [9308 B]
Get: 11 http://deb.debian.org/debian bookworm/main i386 python3 i386 3.11.2-1+b1 [26.3 kB]
Get: 12 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 13 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB]
Get: 14 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB]
Get: 15 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB]
Get: 16 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB]
Get: 17 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 18 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB]
Get: 19 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB]
Get: 20 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB]
Get: 21 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB]
Get: 22 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB]
Get: 23 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB]
Get: 24 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 25 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB]
Get: 26 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB]
Get: 27 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 28 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB]
Get: 29 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 30 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 31 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B]
Get: 32 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 33 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 34 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB]
Get: 35 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB]
Get: 36 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB]
Get: 37 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.3~deb12u1 [720 kB]
Get: 38 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB]
Get: 39 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 40 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 41 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB]
Get: 42 http://deb.debian.org/debian bookworm/main i386 dh-exec i386 0.27 [28.2 kB]
Get: 43 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB]
Get: 44 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB]
Get: 45 http://deb.debian.org/debian bookworm/main i386 libcpptoml-dev all 0.1.1-3 [180 kB]
Get: 46 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB]
Get: 47 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB]
Get: 48 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB]
Get: 49 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1+deb12u1 [80.7 kB]
Get: 50 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB]
Get: 51 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB]
Get: 52 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB]
Get: 53 http://deb.debian.org/debian bookworm/main i386 libcurl3-gnutls i386 7.88.1-10+deb12u4 [417 kB]
Get: 54 http://deb.debian.org/debian bookworm/main i386 libdeflate0 i386 1.14-1 [57.5 kB]
Get: 55 http://deb.debian.org/debian bookworm/main i386 libedit2 i386 3.1-20221030-2 [97.2 kB]
Get: 56 http://deb.debian.org/debian bookworm/main i386 libhtscodecs2 i386 1.3.0-4 [67.4 kB]
Get: 57 http://deb.debian.org/debian bookworm/main i386 libhts3 i386 1.16+ds-3 [469 kB]
Get: 58 http://deb.debian.org/debian bookworm/main i386 libz3-4 i386 4.8.12-3.1 [7853 kB]
Get: 59 http://deb.debian.org/debian bookworm/main i386 libllvm14 i386 1:14.0.6-12 [25.0 MB]
Get: 60 http://deb.debian.org/debian bookworm/main i386 libncurses6 i386 6.4-4 [111 kB]
Get: 61 http://deb.debian.org/debian bookworm/main i386 libomp5-14 i386 1:14.0.6-12 [405 kB]
Get: 62 http://deb.debian.org/debian bookworm/main i386 libomp-14-dev i386 1:14.0.6-12 [130 kB]
Get: 63 http://deb.debian.org/debian bookworm/main i386 libomp-dev i386 1:14.0-55.7~deb12u1 [4668 B]
Get: 64 http://deb.debian.org/debian bookworm/main i386 ninja-build i386 1.11.1-1 [154 kB]
Get: 65 http://deb.debian.org/debian bookworm/main i386 python3-pkg-resources all 66.1.1-1 [296 kB]
Get: 66 http://deb.debian.org/debian bookworm/main i386 python3-lib2to3 all 3.11.2-3 [76.3 kB]
Get: 67 http://deb.debian.org/debian bookworm/main i386 python3-distutils all 3.11.2-3 [131 kB]
Get: 68 http://deb.debian.org/debian bookworm/main i386 python3-setuptools all 66.1.1-1 [521 kB]
Get: 69 http://deb.debian.org/debian bookworm/main i386 meson all 1.0.1-5 [548 kB]
Get: 70 http://deb.debian.org/debian bookworm/main i386 samtools i386 1.16.1-1 [637 kB]
Fetched 63.0 MB in 5s (13.4 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpython3.11-minimal:i386.
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Preparing to unpack .../libpython3.11-minimal_3.11.2-6_i386.deb ...
Unpacking libpython3.11-minimal:i386 (3.11.2-6) ...
Selecting previously unselected package libexpat1:i386.
Preparing to unpack .../libexpat1_2.5.0-1_i386.deb ...
Unpacking libexpat1:i386 (2.5.0-1) ...
Selecting previously unselected package python3.11-minimal.
Preparing to unpack .../python3.11-minimal_3.11.2-6_i386.deb ...
Unpacking python3.11-minimal (3.11.2-6) ...
Setting up libpython3.11-minimal:i386 (3.11.2-6) ...
Setting up libexpat1:i386 (2.5.0-1) ...
Setting up python3.11-minimal (3.11.2-6) ...
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Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_i386.deb ...
Unpacking python3-minimal (3.11.2-1+b1) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_10.0.0_all.deb ...
Unpacking media-types (10.0.0) ...
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I: Building the package
I: Running cd /build/reproducible-path/btllib-1.4.10+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../btllib_1.4.10+dfsg-1_source.changes
dpkg-buildpackage: info: source package btllib
dpkg-buildpackage: info: source version 1.4.10+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Andreas Tille <tille@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
debian/rules clean
dh clean
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
cd obj-i686-linux-gnu && LC_ALL=C.UTF-8 meson setup .. --wrap-mode=nodownload --buildtype=plain --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/i386-linux-gnu
The Meson build system
Version: 1.0.1
Source dir: /build/reproducible-path/btllib-1.4.10+dfsg
Build dir: /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu
Build type: native build
Project name: btllib
Project version: 1.4.9
C++ compiler for the host machine: c++ (gcc 12.2.0 "c++ (Debian 12.2.0-14) 12.2.0")
C++ linker for the host machine: c++ ld.bfd 2.40
Host machine cpu family: x86
Host machine cpu: i686
Configuring config.hpp using configuration
Run-time dependency threads found: YES
Run-time dependency OpenMP found: YES 4.5
Program samtools found: YES (/usr/bin/samtools)
Program gzip found: YES (/bin/gzip)
Program xz found: YES (/usr/bin/xz)
Program bzip2 found: YES (/bin/bzip2)
Program tar found: YES (/bin/tar)
Program swig found: NO
Program doxygen found: NO
WARNING: You should add the boolean check kwarg to the run_command call.
It currently defaults to false,
but it will default to true in future releases of meson.
See also: https://github.com/mesonbuild/meson/issues/9300
Program python3 found: YES (/usr/bin/python3)
Program python3-config found: NO
Message: python3-config not found, skipping Python wrappers.
Build targets in project: 23
btllib 1.4.9
User defined options
buildtype : plain
libdir : lib/i386-linux-gnu
localstatedir: /var
prefix : /usr
sysconfdir : /etc
wrap_mode : nodownload
Found ninja-1.11.1 at /usr/bin/ninja
dh_auto_build
cd obj-i686-linux-gnu && LC_ALL=C.UTF-8 ninja -j8 -v
[1/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash_consts.cpp
[2/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_gfa2_module.cpp
[3/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq.cpp
[4/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_writer.cpp
[5/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash_lowlevel.cpp
[6/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/status.cpp
[7/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fastq_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fastq_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_multiline_fastq_module.cpp
[8/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fasta_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fasta_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_fasta_module.cpp
[9/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_multiline_fasta_module.cpp
[10/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_fastq_module.cpp
[11/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/util.cpp
[12/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader_sam_module.cpp
[13/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/cstring.cpp
[14/51] c++ -Itests/seq_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -MF tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o.d -o tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq.cpp
[15/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/data_stream.cpp
[16/51] c++ -Itests/seq_reader_gfa2_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -MF tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o.d -o tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_gfa2_module.cpp
[17/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/process_pipeline.cpp
[18/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/seq_reader.cpp
[19/51] c++ -Itests/data_stream_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -MF tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o.d -o tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/data_stream.cpp
[20/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/nthash.cpp
[21/51] c++ -Itests/util_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -MF tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o.d -o tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/util.cpp
[22/51] c++ -Itests/seq_reader_fasta_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -MF tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o.d -o tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_fasta_module.cpp
[23/51] c++ -Itests/seq_reader_multiline_fastq_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -MF tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o.d -o tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_multiline_fastq_module.cpp
[24/51] c++ -Itests/bloom_filter_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -MF tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o.d -o tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/bloom_filter.cpp
[25/51] c++ -Itests/seq_writer_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -MF tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o.d -o tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_writer.cpp
[26/51] c++ -Itests/seq_reader_multiline_fasta_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -MF tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o.d -o tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_multiline_fasta_module.cpp
[27/51] c++ -Itests/cstring_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -MF tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o.d -o tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/cstring.cpp
[28/51] c++ -Itests/seq_reader_sam_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -MF tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o.d -o tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_sam_module.cpp
[29/51] c++ -Itests/seq_reader_fastq_module_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -MF tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o.d -o tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/seq_reader_fastq_module.cpp
[30/51] c++ -Itests/counting_bloom_filter_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -MF tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o.d -o tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/counting_bloom_filter.cpp
[31/51] c++ -Irecipes/indexlr.p -Irecipes -I../recipes -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -MF recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o.d -o recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/recipes/indexlr.cpp
[32/51] c++ -Ilibbtllib.a.p -I. -I.. -Iinclude -I../include -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -pthread -MD -MQ libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o -MF libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o.d -o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/src/btllib/bloom_filter.cpp
[33/51] rm -f libbtllib.a && gcc-ar csrD libbtllib.a libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_status.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_lowlevel.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_process_pipeline.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash_consts.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_gfa2_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_data_stream.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_writer.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_bloom_filter.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fastq_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_util.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fasta_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_fastq_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_multiline_fasta_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_seq_reader_sam_module.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_cstring.cpp.o libbtllib.a.p/_build_reproducible-path_btllib-1.4.10+dfsg_src_btllib_nthash.cpp.o
[34/51] c++ -o tests/seq_test tests/seq_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[35/51] c++ -o tests/seq_reader_gfa2_module_test tests/seq_reader_gfa2_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_gfa2_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[36/51] c++ -o tests/data_stream_test tests/data_stream_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_data_stream.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[37/51] c++ -o tests/seq_writer_test tests/seq_writer_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_writer.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[38/51] c++ -o tests/counting_bloom_filter_test tests/counting_bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_counting_bloom_filter.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[39/51] c++ -o tests/seq_reader_multiline_fastq_module_test tests/seq_reader_multiline_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fastq_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[40/51] c++ -o tests/bloom_filter_test tests/bloom_filter_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_bloom_filter.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[41/51] c++ -o recipes/indexlr recipes/indexlr.p/_build_reproducible-path_btllib-1.4.10+dfsg_recipes_indexlr.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[42/51] c++ -o tests/util_test tests/util_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_util.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[43/51] c++ -o tests/seq_reader_fasta_module_test tests/seq_reader_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fasta_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[44/51] c++ -o tests/cstring_test tests/cstring_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_cstring.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[45/51] c++ -o tests/seq_reader_multiline_fasta_module_test tests/seq_reader_multiline_fasta_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_multiline_fasta_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[46/51] c++ -o tests/seq_reader_fastq_module_test tests/seq_reader_fastq_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_fastq_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[47/51] c++ -o tests/seq_reader_sam_module_test tests/seq_reader_sam_module_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_seq_reader_sam_module.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[48/51] c++ -Itests/nthash_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -MF tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o.d -o tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/nthash.cpp
[49/51] c++ -o tests/nthash_test tests/nthash_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_nthash.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
[50/51] c++ -Itests/indexlr_test.p -Itests -I../tests -Iinclude -I../include -I. -I.. -fdiagnostics-color=always -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -Wextra -Wpedantic -std=c++11 -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -pthread -MD -MQ tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -MF tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o.d -o tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -c /build/reproducible-path/btllib-1.4.10+dfsg/tests/indexlr.cpp
[51/51] c++ -o tests/indexlr_test tests/indexlr_test.p/_build_reproducible-path_btllib-1.4.10+dfsg_tests_indexlr.cpp.o -Wl,--as-needed -Wl,--no-undefined -Wl,--start-group -ldl -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 libbtllib.a -Wl,--end-group -pthread -fopenmp -fopenmp
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/btllib-1.4.10+dfsg'
cp -a tests/ obj-*/
dh_auto_test
cd obj-i686-linux-gnu && LC_ALL=C.UTF-8 MESON_TESTTHREADS=8 meson test
ninja: no work to do.
ninja: Entering directory `/build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu'
ninja: no work to do.
1/15 seq OK 0.06s
2/15 seq_reader_gfa2_module OK 0.06s
3/15 util OK 0.01s
4/15 bloom_filter OK 0.17s
5/15 counting_bloom_filter OK 0.20s
6/15 data_stream OK 0.20s
7/15 cstring OK 0.01s
8/15 nthash OK 0.01s
9/15 seq_reader_fasta_module TIMEOUT 30.10s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=202 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_fasta_module_test
10/15 seq_writer TIMEOUT 30.15s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=127 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_writer_test
11/15 seq_reader_multiline_fastq_module TIMEOUT 30.13s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=168 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_multiline_fastq_module_test
12/15 seq_reader_fastq_module TIMEOUT 30.10s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=48 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_fastq_module_test
13/15 seq_reader_multiline_fasta_module TIMEOUT 30.10s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=42 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_multiline_fasta_module_test
14/15 indexlr TIMEOUT 30.02s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=189 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/indexlr_test
15/15 seq_reader_sam_module TIMEOUT 30.02s killed by signal 15 SIGTERM
>>> MALLOC_PERTURB_=2 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_sam_module_test
Ok: 8
Expected Fail: 0
Fail: 0
Unexpected Pass: 0
Skipped: 0
Timeout: 7
Full log written to /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/meson-logs/testlog.txt
cd obj-i686-linux-gnu && tail -v -n \+0 meson-logs/testlog.txt
==> meson-logs/testlog.txt <==
Log of Meson test suite run on 2024-01-22T04:00:07.602180
Inherited environment: DEB_HOST_MULTIARCH=i386-linux-gnu LC_ALL=C.UTF-8 DEB_HOST_GNU_SYSTEM=linux-gnu DEB_BUILD_GNU_TYPE=i686-linux-gnu DEB_TARGET_ARCH_LIBC=gnu FFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong' SUDO_UID=107 DEB_BUILD_ARCH_ENDIAN=little DEB_BUILD_GNU_SYSTEM=linux-gnu DEB_BUILD_ARCH_BITS=32 DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' DEB_HOST_ARCH=i386 DEB_TARGET_ARCH_ENDIAN=little PWD=/build/reproducible-path/btllib-1.4.10+dfsg SOURCE_DATE_EPOCH=1675321847 MAIL=/var/mail/root OBJCXXFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' OLDPWD=/ PBUILDER_PKGDATADIR=/usr/share/pbuilder DEB_HOST_ARCH_BITS=32 LANG=C MAKEFLAGS=w DEB_TARGET_ARCH=i386 DH_INTERNAL_OPTIONS='' DEB_HOST_GNU_CPU=i686 DEB_BUILD_ARCH_LIBC=gnu BUILDUSERNAME=pbuilder1 MFLAGS=-w DEB_TARGET_ARCH_BITS=32 ASFLAGS='' DEB_BUILD_ARCH_CPU=i386 LD_PRELOAD='' DEB_HOST_ARCH_OS=linux SHELL=/bin/bash LD_LIBRARY_PATH=/usr/lib/libeatmydata SHLVL=2 DEB_HOST_ARCH_CPU=i386 FCFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong' PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games PBCURRENTCOMMANDLINEOPERATION=build DEB_BUILD_ARCH_ABI=base LANGUAGE=en_US:en PBUILDER_SYSCONFDIR=/etc DEB_BUILD_ARCH=i386 DEB_HOST_ARCH_LIBC=gnu TZ=/usr/share/zoneinfo/Etc/GMT+12 INVOCATION_ID=60c017965016413489575263f79cb2ff SUDO_GID=112 SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.D8pKN8ai/pbuilderrc_2sUD --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.D8pKN8ai/b1 --logfile b1/build.log btllib_1.4.10+dfsg-1.dsc' GCJFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong' DEB_TARGET_ARCH_CPU=i386 DEB_HOST_GNU_TYPE=i686-linux-gnu DEB_BUILD_ARCH_OS=linux LOGNAME=pbuilder1 CPPFLAGS='-Wdate-time -D_FORTIFY_SOURCE=2' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' DEB_TARGET_MULTIARCH=i386-linux-gnu DEB_BUILD_GNU_CPU=i686 DEB_TARGET_ARCH_OS=linux USER=pbuilder1 DEB_HOST_ARCH_ABI=base DEB_BUILD_MULTIARCH=i386-linux-gnu LDFLAGS='-Wl,-z,relro -Wl,-z,now' DEB_TARGET_GNU_TYPE=i686-linux-gnu DEB_TARGET_ARCH_ABI=base _=/usr/bin/unshare CFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' SUDO_USER=jenkins DFLAGS=-frelease PBUILDER_PKGLIBDIR=/usr/lib/pbuilder DEB_TARGET_GNU_CPU=i686 DEBIAN_FRONTEND=noninteractive HOME=/build/reproducible-path/btllib-1.4.10+dfsg/debian/.debhelper/generated/_source/home DEB_RULES_REQUIRES_ROOT=no DEB_TARGET_GNU_SYSTEM=linux-gnu DEB_HOST_ARCH_ENDIAN=little TERM=unknown OBJCFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' DEB_BUILD_MAINT_OPTIONS=hardening=+all DH_INTERNAL_BUILDFLAGS=1 CXXFLAGS='-g -O2 -ffile-prefix-map=/build/reproducible-path/btllib-1.4.10+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security' DH_INTERNAL_OVERRIDE=dh_auto_test PBUILDER_OPERATION=build MAKELEVEL=2 XDG_RUNTIME_DIR=/tmp/dh-xdg-rundir-Tu87CFei MESON_TESTTHREADS=8
==================================== 1/15 ====================================
test: seq
start time: 04:00:07
duration: 0.06s
result: exit status 0
command: MALLOC_PERTURB_=118 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_test
==============================================================================
==================================== 2/15 ====================================
test: seq_reader_gfa2_module
start time: 04:00:07
duration: 0.06s
result: exit status 0
command: MALLOC_PERTURB_=223 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_gfa2_module_test
==============================================================================
==================================== 3/15 ====================================
test: util
start time: 04:00:07
duration: 0.01s
result: exit status 0
command: MALLOC_PERTURB_=133 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/util_test
==============================================================================
==================================== 4/15 ====================================
test: bloom_filter
start time: 04:00:07
duration: 0.17s
result: exit status 0
command: MALLOC_PERTURB_=150 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/bloom_filter_test
----------------------------------- stderr -----------------------------------
Testing BloomFilter
Testing KmerBloomFilter
Testing SeedBloomFilter
Testing KmerBloomFilter with multiple threads
False positives = 0
==============================================================================
==================================== 5/15 ====================================
test: counting_bloom_filter
start time: 04:00:07
duration: 0.20s
result: exit status 0
command: MALLOC_PERTURB_=20 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/counting_bloom_filter_test
----------------------------------- stderr -----------------------------------
Testing CountingBloomFilter
Testing KmerCountingBloomFilter
Testing KmerCountingBloomfilter with multiple threads
False positives = 0
Seqs with more than 1 presence = 92
==============================================================================
==================================== 6/15 ====================================
test: data_stream
start time: 04:00:07
duration: 0.20s
result: exit status 0
command: MALLOC_PERTURB_=82 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/data_stream_test
----------------------------------- stderr -----------------------------------
Test .gz write
Test .gz read
Test .xz write
xz: Reduced the number of threads from 10 to 8 to not exceed the memory usage limit of 1400 MiB
Test .xz read
==============================================================================
==================================== 7/15 ====================================
test: cstring
start time: 04:00:07
duration: 0.01s
result: exit status 0
command: MALLOC_PERTURB_=112 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/cstring_test
==============================================================================
==================================== 8/15 ====================================
test: nthash
start time: 04:00:07
duration: 0.01s
result: exit status 0
command: MALLOC_PERTURB_=223 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/nthash_test
----------------------------------- stderr -----------------------------------
./tests/nthash.cpp: Testing k-mer hash values
./tests/nthash.cpp: Testing k-mer rolling
./tests/nthash.cpp: Testing k-mer rolling vs ntbase hash values
./tests/nthash.cpp: Testing canonical hashing
./tests/nthash.cpp: Testing k-mer back rolling
./tests/nthash.cpp: Testing k-mer peeking
./tests/nthash.cpp: Testing skipping Ns
./tests/nthash.cpp: Testing base substitution
Testing RNA
./tests/nthash.cpp: Testing block parsing
./tests/nthash.cpp: Testing spaced seed hash values
./tests/nthash.cpp: Testing spaced seeds
./tests/nthash.cpp: Testing spaced seed back roll
Testing rolling spaced seeds vs masked hashing
Testing reset function
./tests/nthash.cpp: Testing canonical hashing in spaced seeds
==============================================================================
==================================== 9/15 ====================================
test: seq_reader_fasta_module
start time: 04:00:07
duration: 30.10s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=202 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_fasta_module_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test small FASTA
==============================================================================
=================================== 10/15 ====================================
test: seq_writer
start time: 04:00:07
duration: 30.15s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=127 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_writer_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test FASTA
==============================================================================
=================================== 11/15 ====================================
test: seq_reader_multiline_fastq_module
start time: 04:00:07
duration: 30.13s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=168 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_multiline_fastq_module_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test multiline FASTQ
==============================================================================
=================================== 12/15 ====================================
test: seq_reader_fastq_module
start time: 04:00:07
duration: 30.10s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=48 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_fastq_module_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test small FASTA and FASTQ simultaneously
==============================================================================
=================================== 13/15 ====================================
test: seq_reader_multiline_fasta_module
start time: 04:00:07
duration: 30.10s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=42 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_multiline_fasta_module_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test multiline FASTA
==============================================================================
=================================== 14/15 ====================================
test: indexlr
start time: 04:00:07
duration: 30.02s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=189 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/indexlr_test
----------------------------------- stderr -----------------------------------
Testing on empty file
[2024-01-22 04:00:07][33m[WARNING] [0m./tests/empty.fa is empty.
==============================================================================
=================================== 15/15 ====================================
test: seq_reader_sam_module
start time: 04:00:07
duration: 30.02s
result: killed by signal 15 SIGTERM
command: MALLOC_PERTURB_=2 /build/reproducible-path/btllib-1.4.10+dfsg/obj-i686-linux-gnu/tests/seq_reader_sam_module_test
----------------------------------- stderr -----------------------------------
Iteration 1
Test small SAM
[2024-01-22 04:00:07][32m[INFO] [0m
samtools 1.16.1
Using htslib 1.16
[M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 2 reads
==============================================================================
Summary of Failures:
9/15 seq_reader_fasta_module TIMEOUT 30.10s killed by signal 15 SIGTERM
10/15 seq_writer TIMEOUT 30.15s killed by signal 15 SIGTERM
11/15 seq_reader_multiline_fastq_module TIMEOUT 30.13s killed by signal 15 SIGTERM
12/15 seq_reader_fastq_module TIMEOUT 30.10s killed by signal 15 SIGTERM
13/15 seq_reader_multiline_fasta_module TIMEOUT 30.10s killed by signal 15 SIGTERM
14/15 indexlr TIMEOUT 30.02s killed by signal 15 SIGTERM
15/15 seq_reader_sam_module TIMEOUT 30.02s killed by signal 15 SIGTERM
Ok: 8
Expected Fail: 0
Fail: 0
Unexpected Pass: 0
Skipped: 0
Timeout: 7
dh_auto_test: error: cd obj-i686-linux-gnu && LC_ALL=C.UTF-8 MESON_TESTTHREADS=8 meson test returned exit code 7
make[1]: *** [debian/rules:12: override_dh_auto_test] Error 25
make[1]: Leaving directory '/build/reproducible-path/btllib-1.4.10+dfsg'
make: *** [debian/rules:8: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
I: copying local configuration
E: Failed autobuilding of package
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/27137 and its subdirectories