W: cgroups are not available on the host, not using them.
I: pbuilder: network access will be disabled during build
I: Current time: Sat Apr 29 00:17:06 -12 2023
I: pbuilder-time-stamp: 1682770626
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [libtfbs-perl_0.7.1+ds-2.dsc]
I: copying [./libtfbs-perl_0.7.1+ds.orig.tar.xz]
I: copying [./libtfbs-perl_0.7.1+ds-2.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sat Jan 29 19:14:28 2022 -12
gpgv: using RSA key 8182DE417056408D614650D16750F10AE88D4AF1
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./libtfbs-perl_0.7.1+ds-2.dsc: no acceptable signature found
dpkg-source: info: extracting libtfbs-perl in libtfbs-perl-0.7.1+ds
dpkg-source: info: unpacking libtfbs-perl_0.7.1+ds.orig.tar.xz
dpkg-source: info: unpacking libtfbs-perl_0.7.1+ds-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying configure.patch
dpkg-source: info: applying spelling-errors.patch
I: using fakeroot in build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/9941/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8'
DISTRIBUTION='bookworm'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='9941'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.FgPprf5z/pbuilderrc_JbWI --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.FgPprf5z/b1 --logfile b1/build.log libtfbs-perl_0.7.1+ds-2.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/sbin/chroot'
http_proxy='http://78.137.99.97:3128'
I: uname -a
Linux ionos2-i386 5.10.0-21-686-pae #1 SMP Debian 5.10.162-1 (2023-01-21) i686 GNU/Linux
I: ls -l /bin
total 6036
-rwxr-xr-x 1 root root 1408088 Apr 23 09:24 bash
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2
-rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore
-rwxr-xr-x 1 root root 42920 Sep 20 2022 cat
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp
-rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chown
-rwxr-xr-x 1 root root 162024 Sep 20 2022 cp
-rwxr-xr-x 1 root root 136916 Jan 5 01:20 dash
-rwxr-xr-x 1 root root 137160 Sep 20 2022 date
-rwxr-xr-x 1 root root 100364 Sep 20 2022 dd
-rwxr-xr-x 1 root root 108940 Sep 20 2022 df
-rwxr-xr-x 1 root root 162152 Sep 20 2022 dir
-rwxr-xr-x 1 root root 87760 Mar 22 22:20 dmesg
lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname
-rwxr-xr-x 1 root root 38760 Sep 20 2022 echo
-rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep
-rwxr-xr-x 1 root root 34664 Sep 20 2022 false
-rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep
-rwxr-xr-x 1 root root 84272 Mar 22 22:20 findmnt
-rwsr-xr-x 1 root root 30240 Mar 22 20:38 fusermount
-rwxr-xr-x 1 root root 218680 Jan 24 02:43 grep
-rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip
-rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe
-rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip
-rwxr-xr-x 1 root root 21916 Dec 19 01:33 hostname
-rwxr-xr-x 1 root root 75756 Sep 20 2022 ln
-rwxr-xr-x 1 root root 55600 Mar 22 23:43 login
-rwxr-xr-x 1 root root 162152 Sep 20 2022 ls
-rwxr-xr-x 1 root root 214568 Mar 22 22:20 lsblk
-rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir
-rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod
-rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp
-rwxr-xr-x 1 root root 63016 Mar 22 22:20 more
-rwsr-xr-x 1 root root 58912 Mar 22 22:20 mount
-rwxr-xr-x 1 root root 13856 Mar 22 22:20 mountpoint
-rwxr-xr-x 1 root root 157932 Sep 20 2022 mv
lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd
lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash
-rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink
-rwxr-xr-x 1 root root 75720 Sep 20 2022 rm
-rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir
-rwxr-xr-x 1 root root 22308 Nov 2 04:31 run-parts
-rwxr-xr-x 1 root root 133224 Jan 5 07:55 sed
lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash
-rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep
-rwxr-xr-x 1 root root 87976 Sep 20 2022 stty
-rwsr-xr-x 1 root root 83492 Mar 22 22:20 su
-rwxr-xr-x 1 root root 38792 Sep 20 2022 sync
-rwxr-xr-x 1 root root 598456 Apr 6 02:25 tar
-rwxr-xr-x 1 root root 13860 Nov 2 04:31 tempfile
-rwxr-xr-x 1 root root 120776 Sep 20 2022 touch
-rwxr-xr-x 1 root root 34664 Sep 20 2022 true
-rwxr-xr-x 1 root root 17892 Mar 22 20:38 ulockmgr_server
-rwsr-xr-x 1 root root 30236 Mar 22 22:20 umount
-rwxr-xr-x 1 root root 38760 Sep 20 2022 uname
-rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress
-rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir
-rwxr-xr-x 1 root root 71216 Mar 22 22:20 wdctl
lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat
-rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp
-rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff
-rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep
-rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep
-rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce
-rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep
-rwxr-xr-x 1 root root 2206 Apr 9 2022 zless
-rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore
-rwxr-xr-x 1 root root 4577 Apr 9 2022 znew
I: user script /srv/workspace/pbuilder/9941/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 12), perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19604 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on pdl (>= 1:2.016); however:
Package pdl is not installed.
pbuilder-satisfydepends-dummy depends on bioperl; however:
Package bioperl is not installed.
pbuilder-satisfydepends-dummy depends on libwww-perl; however:
Package libwww-perl is not installed.
pbuilder-satisfydepends-dummy depends on libdbi-perl; however:
Package libdbi-perl is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libabsl20220623{a} libalgorithm-diff-perl{a} libaom3{a} libarchive-zip-perl{a} libavif15{a} libbio-perl-perl{a} libbrotli1{a} libbsd0{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libcurl3-gnutls{a} libdata-stag-perl{a} libdav1d6{a} libdbi-perl{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdevel-stacktrace-perl{a} libelf1{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libgav1-1{a} libgd3{a} libgfortran5{a} libgsl27{a} libgslcblas0{a} libhdf4-0-alt{a} libheif1{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libjbig0{a} libjpeg62-turbo{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnghttp2-14{a} libnuma1{a} libpipeline1{a} libpng16-16{a} libpod-parser-perl{a} libproj25{a} libpsl5{a} librav1e0{a} libregexp-ipv6-perl{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libsub-uplevel-perl{a} libterm-readkey-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-balanced-perl{a} libtext-diff-perl{a} libtiff6{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwebp7{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libx265-199{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libxpm4{a} libyuv0{a} m4{a} man-db{a} netbase{a} openssl{a} pdl{a} perl-openssl-defaults{a} po-debconf{a} proj-data{a} sensible-utils{a}
The following packages are RECOMMENDED but will NOT be installed:
bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgpm2 libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libldap-common liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libsasl2-modules libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libterm-readline-gnu-perl libterm-readline-perl-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libyaml-perl lynx perl-doc perl-tk publicsuffix wget
0 packages upgraded, 125 newly installed, 0 to remove and 0 not upgraded.
Need to get 52.2 MB of archives. After unpacking 185 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main i386 netbase all 6.4 [12.8 kB]
Get: 2 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 3 http://deb.debian.org/debian bookworm/main i386 openssl i386 3.0.8-1 [1412 kB]
Get: 4 http://deb.debian.org/debian bookworm/main i386 ca-certificates all 20230311 [153 kB]
Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB]
Get: 6 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB]
Get: 7 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB]
Get: 8 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB]
Get: 9 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 10 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB]
Get: 11 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB]
Get: 12 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB]
Get: 13 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB]
Get: 14 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB]
Get: 15 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB]
Get: 16 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 17 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB]
Get: 18 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB]
Get: 19 http://deb.debian.org/debian bookworm/main i386 libio-string-perl all 1.08-4 [12.1 kB]
Get: 20 http://deb.debian.org/debian bookworm/main i386 libdata-stag-perl all 0.14-3 [448 kB]
Get: 21 http://deb.debian.org/debian bookworm/main i386 libbio-perl-perl all 1.7.8-1 [2603 kB]
Get: 22 http://deb.debian.org/debian bookworm/main i386 libclass-data-inheritable-perl all 0.08-3 [8588 B]
Get: 23 http://deb.debian.org/debian bookworm/main i386 libdevel-stacktrace-perl all 2.0400-2 [26.8 kB]
Get: 24 http://deb.debian.org/debian bookworm/main i386 libexception-class-perl all 1.45-1 [34.6 kB]
Get: 25 http://deb.debian.org/debian bookworm/main i386 libtest-deep-perl all 1.204-1 [52.9 kB]
Get: 26 http://deb.debian.org/debian bookworm/main i386 libcapture-tiny-perl all 0.48-2 [24.6 kB]
Get: 27 http://deb.debian.org/debian bookworm/main i386 libalgorithm-diff-perl all 1.201-1 [43.3 kB]
Get: 28 http://deb.debian.org/debian bookworm/main i386 libtext-diff-perl all 1.45-2 [27.2 kB]
Get: 29 http://deb.debian.org/debian bookworm/main i386 libtest-differences-perl all 0.69-1 [18.9 kB]
Get: 30 http://deb.debian.org/debian bookworm/main i386 libsub-uplevel-perl all 0.2800-3 [14.0 kB]
Get: 31 http://deb.debian.org/debian bookworm/main i386 libtest-exception-perl all 0.43-3 [16.9 kB]
Get: 32 http://deb.debian.org/debian bookworm/main i386 libtest-warn-perl all 0.37-2 [14.5 kB]
Get: 33 http://deb.debian.org/debian bookworm/main i386 libtest-most-perl all 0.38-1 [25.1 kB]
Get: 34 http://deb.debian.org/debian bookworm/main i386 bioperl all 1.7.8-1 [246 kB]
Get: 35 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 36 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB]
Get: 37 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 38 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 39 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B]
Get: 40 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 41 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 42 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB]
Get: 43 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB]
Get: 44 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB]
Get: 45 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB]
Get: 46 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB]
Get: 47 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 48 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 49 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB]
Get: 50 http://deb.debian.org/debian bookworm/main i386 fonts-dejavu-core all 2.37-6 [1068 kB]
Get: 51 http://deb.debian.org/debian bookworm/main i386 fontconfig-config i386 2.14.1-4 [315 kB]
Get: 52 http://deb.debian.org/debian bookworm/main i386 libabsl20220623 i386 20220623.1-1 [444 kB]
Get: 53 http://deb.debian.org/debian bookworm/main i386 libaom3 i386 3.6.0-1 [1895 kB]
Get: 54 http://deb.debian.org/debian bookworm/main i386 libdav1d6 i386 1.0.0-2 [316 kB]
Get: 55 http://deb.debian.org/debian bookworm/main i386 libgav1-1 i386 0.18.0-1+b1 [307 kB]
Get: 56 http://deb.debian.org/debian bookworm/main i386 librav1e0 i386 0.5.1-6 [615 kB]
Get: 57 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB]
Get: 58 http://deb.debian.org/debian bookworm/main i386 libyuv0 i386 0.0~git20230123.b2528b0-1 [108 kB]
Get: 59 http://deb.debian.org/debian bookworm/main i386 libavif15 i386 0.11.1-1 [101 kB]
Get: 60 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB]
Get: 61 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB]
Get: 62 http://deb.debian.org/debian bookworm/main i386 libclone-perl i386 0.46-1 [13.8 kB]
Get: 63 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB]
Get: 64 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB]
Get: 65 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB]
Get: 66 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB]
Get: 67 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB]
Get: 68 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB]
Get: 69 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB]
Get: 70 http://deb.debian.org/debian bookworm/main i386 libcurl3-gnutls i386 7.88.1-9 [412 kB]
Get: 71 http://deb.debian.org/debian bookworm/main i386 libdbi-perl i386 1.643-4 [777 kB]
Get: 72 http://deb.debian.org/debian bookworm/main i386 libde265-0 i386 1.0.11-1 [193 kB]
Get: 73 http://deb.debian.org/debian bookworm/main i386 libdeflate0 i386 1.14-1 [57.5 kB]
Get: 74 http://deb.debian.org/debian bookworm/main i386 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 75 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB]
Get: 76 http://deb.debian.org/debian bookworm/main i386 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 77 http://deb.debian.org/debian bookworm/main i386 libhttp-date-perl all 6.05-2 [10.5 kB]
Get: 78 http://deb.debian.org/debian bookworm/main i386 libfile-listing-perl all 6.15-1 [12.6 kB]
Get: 79 http://deb.debian.org/debian bookworm/main i386 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 80 http://deb.debian.org/debian bookworm/main i386 libpng16-16 i386 1.6.39-2 [283 kB]
Get: 81 http://deb.debian.org/debian bookworm/main i386 libfreetype6 i386 2.12.1+dfsg-4 [410 kB]
Get: 82 http://deb.debian.org/debian bookworm/main i386 libfontconfig1 i386 2.14.1-4 [398 kB]
Get: 83 http://deb.debian.org/debian bookworm/main i386 libnuma1 i386 2.0.16-1 [22.7 kB]
Get: 84 http://deb.debian.org/debian bookworm/main i386 libx265-199 i386 3.5-2+b1 [687 kB]
Get: 85 http://deb.debian.org/debian bookworm/main i386 libheif1 i386 1.15.1-1 [230 kB]
Get: 86 http://deb.debian.org/debian bookworm/main i386 libjbig0 i386 2.1-6.1 [31.6 kB]
Get: 87 http://deb.debian.org/debian bookworm/main i386 liblerc4 i386 4.0.0+ds-2 [181 kB]
Get: 88 http://deb.debian.org/debian bookworm/main i386 libwebp7 i386 1.2.4-0.1 [293 kB]
Get: 89 http://deb.debian.org/debian bookworm/main i386 libtiff6 i386 4.5.0-5 [332 kB]
Get: 90 http://deb.debian.org/debian bookworm/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB]
Get: 91 http://deb.debian.org/debian bookworm/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB]
Get: 92 http://deb.debian.org/debian bookworm/main i386 libxcb1 i386 1.15-1 [148 kB]
Get: 93 http://deb.debian.org/debian bookworm/main i386 libx11-data all 2:1.8.4-2 [292 kB]
Get: 94 http://deb.debian.org/debian bookworm/main i386 libx11-6 i386 2:1.8.4-2 [782 kB]
Get: 95 http://deb.debian.org/debian bookworm/main i386 libxpm4 i386 1:3.5.12-1.1 [50.0 kB]
Get: 96 http://deb.debian.org/debian bookworm/main i386 libgd3 i386 2.3.3-9 [129 kB]
Get: 97 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB]
Get: 98 http://deb.debian.org/debian bookworm/main i386 libgslcblas0 i386 2.7.1+dfsg-3+b1 [107 kB]
Get: 99 http://deb.debian.org/debian bookworm/main i386 libgsl27 i386 2.7.1+dfsg-3+b1 [929 kB]
Get: 100 http://deb.debian.org/debian bookworm/main i386 libhdf4-0-alt i386 4.2.15-5 [275 kB]
Get: 101 http://deb.debian.org/debian bookworm/main i386 libhtml-tagset-perl all 3.20-6 [11.7 kB]
Get: 102 http://deb.debian.org/debian bookworm/main i386 libregexp-ipv6-perl all 0.03-3 [5212 B]
Get: 103 http://deb.debian.org/debian bookworm/main i386 liburi-perl all 5.17-1 [90.4 kB]
Get: 104 http://deb.debian.org/debian bookworm/main i386 libhtml-parser-perl i386 3.81-1 [102 kB]
Get: 105 http://deb.debian.org/debian bookworm/main i386 libhtml-tree-perl all 5.07-3 [211 kB]
Get: 106 http://deb.debian.org/debian bookworm/main i386 libio-html-perl all 1.004-3 [16.2 kB]
Get: 107 http://deb.debian.org/debian bookworm/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 108 http://deb.debian.org/debian bookworm/main i386 libhttp-message-perl all 6.44-1 [81.7 kB]
Get: 109 http://deb.debian.org/debian bookworm/main i386 libhttp-cookies-perl all 6.10-1 [19.6 kB]
Get: 110 http://deb.debian.org/debian bookworm/main i386 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get: 111 http://deb.debian.org/debian bookworm/main i386 perl-openssl-defaults i386 7+b1 [7920 B]
Get: 112 http://deb.debian.org/debian bookworm/main i386 libnet-ssleay-perl i386 1.92-2+b1 [318 kB]
Get: 113 http://deb.debian.org/debian bookworm/main i386 libio-socket-ssl-perl all 2.081-2 [219 kB]
Get: 114 http://deb.debian.org/debian bookworm/main i386 libnet-http-perl all 6.22-1 [25.3 kB]
Get: 115 http://deb.debian.org/debian bookworm/main i386 libtry-tiny-perl all 0.31-2 [22.6 kB]
Get: 116 http://deb.debian.org/debian bookworm/main i386 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 117 http://deb.debian.org/debian bookworm/main i386 libwww-perl all 6.68-1 [186 kB]
Get: 118 http://deb.debian.org/debian bookworm/main i386 liblwp-protocol-https-perl all 6.10-1 [12.2 kB]
Get: 119 http://deb.debian.org/debian bookworm/main i386 libncurses6 i386 6.4-2 [111 kB]
Get: 120 http://deb.debian.org/debian bookworm/main i386 libpod-parser-perl all 1.65-1 [96.3 kB]
Get: 121 http://deb.debian.org/debian bookworm/main i386 proj-data all 9.1.1-1 [6212 kB]
Get: 122 http://deb.debian.org/debian bookworm/main i386 libproj25 i386 9.1.1-1+b1 [1360 kB]
Get: 123 http://deb.debian.org/debian bookworm/main i386 libterm-readkey-perl i386 2.38-2+b1 [25.1 kB]
Get: 124 http://deb.debian.org/debian bookworm/main i386 libtext-balanced-perl all 2.06-2 [42.4 kB]
Get: 125 http://deb.debian.org/debian bookworm/main i386 pdl i386 1:2.081-1+b1 [4374 kB]
Fetched 52.2 MB in 2s (34.2 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package netbase.
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Preparing to unpack .../000-netbase_6.4_all.deb ...
Unpacking netbase (6.4) ...
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Unpacking sensible-utils (0.0.17+nmu1) ...
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Unpacking openssl (3.0.8-1) ...
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Unpacking ca-certificates (20230311) ...
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Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:i386.
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Unpacking libmagic1:i386 (1:5.44-3) ...
Selecting previously unselected package file.
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Unpacking file (1:5.44-3) ...
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Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:i386.
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Unpacking libuchardet0:i386 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../009-groff-base_1.22.4-10_i386.deb ...
Unpacking groff-base (1.22.4-10) ...
Selecting previously unselected package bsdextrautils.
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Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:i386.
Preparing to unpack .../011-libpipeline1_1.5.7-1_i386.deb ...
Unpacking libpipeline1:i386 (1.5.7-1) ...
Selecting previously unselected package man-db.
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Unpacking man-db (2.11.2-2) ...
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Preparing to unpack .../013-m4_1.4.19-3_i386.deb ...
Unpacking m4 (1.4.19-3) ...
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Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
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Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../016-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
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Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libio-string-perl.
Preparing to unpack .../018-libio-string-perl_1.08-4_all.deb ...
Unpacking libio-string-perl (1.08-4) ...
Selecting previously unselected package libdata-stag-perl.
Preparing to unpack .../019-libdata-stag-perl_0.14-3_all.deb ...
Unpacking libdata-stag-perl (0.14-3) ...
Selecting previously unselected package libbio-perl-perl.
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Unpacking libbio-perl-perl (1.7.8-1) ...
Selecting previously unselected package libclass-data-inheritable-perl.
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Unpacking libclass-data-inheritable-perl (0.08-3) ...
Selecting previously unselected package libdevel-stacktrace-perl.
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Unpacking libdevel-stacktrace-perl (2.0400-2) ...
Selecting previously unselected package libexception-class-perl.
Preparing to unpack .../023-libexception-class-perl_1.45-1_all.deb ...
Unpacking libexception-class-perl (1.45-1) ...
Selecting previously unselected package libtest-deep-perl.
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Unpacking libtest-deep-perl (1.204-1) ...
Selecting previously unselected package libcapture-tiny-perl.
Preparing to unpack .../025-libcapture-tiny-perl_0.48-2_all.deb ...
Unpacking libcapture-tiny-perl (0.48-2) ...
Selecting previously unselected package libalgorithm-diff-perl.
Preparing to unpack .../026-libalgorithm-diff-perl_1.201-1_all.deb ...
Unpacking libalgorithm-diff-perl (1.201-1) ...
Selecting previously unselected package libtext-diff-perl.
Preparing to unpack .../027-libtext-diff-perl_1.45-2_all.deb ...
Unpacking libtext-diff-perl (1.45-2) ...
Selecting previously unselected package libtest-differences-perl.
Preparing to unpack .../028-libtest-differences-perl_0.69-1_all.deb ...
Unpacking libtest-differences-perl (0.69-1) ...
Selecting previously unselected package libsub-uplevel-perl.
Preparing to unpack .../029-libsub-uplevel-perl_0.2800-3_all.deb ...
Unpacking libsub-uplevel-perl (0.2800-3) ...
Selecting previously unselected package libtest-exception-perl.
Preparing to unpack .../030-libtest-exception-perl_0.43-3_all.deb ...
Unpacking libtest-exception-perl (0.43-3) ...
Selecting previously unselected package libtest-warn-perl.
Preparing to unpack .../031-libtest-warn-perl_0.37-2_all.deb ...
Unpacking libtest-warn-perl (0.37-2) ...
Selecting previously unselected package libtest-most-perl.
Preparing to unpack .../032-libtest-most-perl_0.38-1_all.deb ...
Unpacking libtest-most-perl (0.38-1) ...
Selecting previously unselected package bioperl.
Preparing to unpack .../033-bioperl_1.7.8-1_all.deb ...
Unpacking bioperl (1.7.8-1) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../034-libdebhelper-perl_13.11.4_all.deb ...
Unpacking libdebhelper-perl (13.11.4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../035-libtool_2.4.7-5_all.deb ...
Unpacking libtool (2.4.7-5) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../036-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../037-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../038-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../039-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
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Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:i386.
Preparing to unpack .../041-libelf1_0.188-2.1_i386.deb ...
Unpacking libelf1:i386 (0.188-2.1) ...
Selecting previously unselected package dwz.
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Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:i386.
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Unpacking libicu72:i386 (72.1-3) ...
Selecting previously unselected package libxml2:i386.
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Unpacking libxml2:i386 (2.9.14+dfsg-1.2) ...
Selecting previously unselected package gettext.
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Unpacking gettext (0.21-12) ...
Selecting previously unselected package intltool-debian.
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Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
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Unpacking po-debconf (1.0.21+nmu1) ...
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Unpacking debhelper (13.11.4) ...
Selecting previously unselected package fonts-dejavu-core.
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Unpacking fonts-dejavu-core (2.37-6) ...
Selecting previously unselected package fontconfig-config.
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Unpacking fontconfig-config (2.14.1-4) ...
Selecting previously unselected package libabsl20220623:i386.
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Unpacking libabsl20220623:i386 (20220623.1-1) ...
Selecting previously unselected package libaom3:i386.
Preparing to unpack .../052-libaom3_3.6.0-1_i386.deb ...
Unpacking libaom3:i386 (3.6.0-1) ...
Selecting previously unselected package libdav1d6:i386.
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Unpacking libdav1d6:i386 (1.0.0-2) ...
Selecting previously unselected package libgav1-1:i386.
Preparing to unpack .../054-libgav1-1_0.18.0-1+b1_i386.deb ...
Unpacking libgav1-1:i386 (0.18.0-1+b1) ...
Selecting previously unselected package librav1e0:i386.
Preparing to unpack .../055-librav1e0_0.5.1-6_i386.deb ...
Unpacking librav1e0:i386 (0.5.1-6) ...
Selecting previously unselected package libjpeg62-turbo:i386.
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Unpacking libjpeg62-turbo:i386 (1:2.1.5-2) ...
Selecting previously unselected package libyuv0:i386.
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Unpacking libyuv0:i386 (0.0~git20230123.b2528b0-1) ...
Selecting previously unselected package libavif15:i386.
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Unpacking libavif15:i386 (0.11.1-1) ...
Selecting previously unselected package libbrotli1:i386.
Preparing to unpack .../059-libbrotli1_1.0.9-2+b6_i386.deb ...
Unpacking libbrotli1:i386 (1.0.9-2+b6) ...
Selecting previously unselected package libbsd0:i386.
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Unpacking libbsd0:i386 (0.11.7-2) ...
Selecting previously unselected package libclone-perl:i386.
Preparing to unpack .../061-libclone-perl_0.46-1_i386.deb ...
Unpacking libclone-perl:i386 (0.46-1) ...
Selecting previously unselected package libsasl2-modules-db:i386.
Preparing to unpack .../062-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ...
Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg-10) ...
Selecting previously unselected package libsasl2-2:i386.
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Unpacking libsasl2-2:i386 (2.1.28+dfsg-10) ...
Selecting previously unselected package libldap-2.5-0:i386.
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Unpacking libldap-2.5-0:i386 (2.5.13+dfsg-5) ...
Selecting previously unselected package libnghttp2-14:i386.
Preparing to unpack .../065-libnghttp2-14_1.52.0-1_i386.deb ...
Unpacking libnghttp2-14:i386 (1.52.0-1) ...
Selecting previously unselected package libpsl5:i386.
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Unpacking libpsl5:i386 (0.21.2-1) ...
Selecting previously unselected package librtmp1:i386.
Preparing to unpack .../067-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ...
Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:i386.
Preparing to unpack .../068-libssh2-1_1.10.0-3+b1_i386.deb ...
Unpacking libssh2-1:i386 (1.10.0-3+b1) ...
Selecting previously unselected package libcurl3-gnutls:i386.
Preparing to unpack .../069-libcurl3-gnutls_7.88.1-9_i386.deb ...
Unpacking libcurl3-gnutls:i386 (7.88.1-9) ...
Selecting previously unselected package libdbi-perl:i386.
Preparing to unpack .../070-libdbi-perl_1.643-4_i386.deb ...
Unpacking libdbi-perl:i386 (1.643-4) ...
Selecting previously unselected package libde265-0:i386.
Preparing to unpack .../071-libde265-0_1.0.11-1_i386.deb ...
Unpacking libde265-0:i386 (1.0.11-1) ...
Selecting previously unselected package libdeflate0:i386.
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Unpacking libdeflate0:i386 (1.14-1) ...
Selecting previously unselected package libencode-locale-perl.
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Unpacking libencode-locale-perl (1.05-3) ...
Selecting previously unselected package libexpat1:i386.
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Unpacking libexpat1:i386 (2.5.0-1) ...
Selecting previously unselected package libtimedate-perl.
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Unpacking libtimedate-perl (2.3300-2) ...
Selecting previously unselected package libhttp-date-perl.
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Unpacking libhttp-date-perl (6.05-2) ...
Selecting previously unselected package libfile-listing-perl.
Preparing to unpack .../077-libfile-listing-perl_6.15-1_all.deb ...
Unpacking libfile-listing-perl (6.15-1) ...
Selecting previously unselected package libfile-which-perl.
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Unpacking libfile-which-perl (1.27-2) ...
Selecting previously unselected package libpng16-16:i386.
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Unpacking libpng16-16:i386 (1.6.39-2) ...
Selecting previously unselected package libfreetype6:i386.
Preparing to unpack .../080-libfreetype6_2.12.1+dfsg-4_i386.deb ...
Unpacking libfreetype6:i386 (2.12.1+dfsg-4) ...
Selecting previously unselected package libfontconfig1:i386.
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Unpacking libfontconfig1:i386 (2.14.1-4) ...
Selecting previously unselected package libnuma1:i386.
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Unpacking libnuma1:i386 (2.0.16-1) ...
Selecting previously unselected package libx265-199:i386.
Preparing to unpack .../083-libx265-199_3.5-2+b1_i386.deb ...
Unpacking libx265-199:i386 (3.5-2+b1) ...
Selecting previously unselected package libheif1:i386.
Preparing to unpack .../084-libheif1_1.15.1-1_i386.deb ...
Unpacking libheif1:i386 (1.15.1-1) ...
Selecting previously unselected package libjbig0:i386.
Preparing to unpack .../085-libjbig0_2.1-6.1_i386.deb ...
Unpacking libjbig0:i386 (2.1-6.1) ...
Selecting previously unselected package liblerc4:i386.
Preparing to unpack .../086-liblerc4_4.0.0+ds-2_i386.deb ...
Unpacking liblerc4:i386 (4.0.0+ds-2) ...
Selecting previously unselected package libwebp7:i386.
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Unpacking libwebp7:i386 (1.2.4-0.1) ...
Selecting previously unselected package libtiff6:i386.
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Reading package lists...
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-> Finished parsing the build-deps
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Building dependency tree...
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fakeroot is already the newest version (1.31-1.2).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: Running cd /build/libtfbs-perl-0.7.1+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libtfbs-perl_0.7.1+ds-2_source.changes
dpkg-buildpackage: info: source package libtfbs-perl
dpkg-buildpackage: info: source version 0.7.1+ds-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Bas Couwenberg <sebastic@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
fakeroot debian/rules clean
dh clean
dh_clean
debian/rules build
dh build
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
/usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now"
-------------------------------------------------
WARNING
-------------------------------------------------
GD.pm does not seem to be installed.
GD is reqired to produce "sequence logos" from
information content matrices. If you need this
functionality, please visit
http://stein.cshl.org/WWW/software/GD/
for information on obtaining and installing GD.
-------------------------------------------------
Do you have write access to a MySQL database server? [n] Checking if your kit is complete...
Warning: the following files are missing in your kit:
README
Please inform the author.
Writing MYMETA.yml and MYMETA.json
Generating a Unix-style Makefile
Writing Makefile for TFBS
Writing MYMETA.yml and MYMETA.json
dh_auto_build
make -j8
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
make[2]: Entering directory '/build/libtfbs-perl-0.7.1+ds/Ext'
Running Mkbootstrap for pwmsearch ()
"/usr/bin/perl" "/usr/share/perl/5.36.0/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.36/ExtUtils/typemap' pwmsearch.xs > pwmsearch.xsc
chmod 644 "pwmsearch.bs"
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644
Skip ../blib/lib/pwm_search.h (unchanged)
Skip ../blib/lib/TFBS/Ext/pwmsearch.pm (unchanged)
cp lib/pwm_searchPFF.c ../blib/lib/pwm_searchPFF.c
cp TFBS/Matrix/ICM.pm blib/lib/TFBS/Matrix/ICM.pm
cp TFBS/SitePair.pm blib/lib/TFBS/SitePair.pm
cp TFBS/Matrix/Alignment.pm blib/lib/TFBS/Matrix/Alignment.pm
Skip blib/lib/TFBS/PatternGen/Elph/Motif.pm (unchanged)
cp TFBS/Matrix/PFM.pm blib/lib/TFBS/Matrix/PFM.pm
Skip blib/lib/TFBS/DB/LocalTRANSFAC.pm (unchanged)
cp TFBS/DB/JASPAR.pm blib/lib/TFBS/DB/JASPAR.pm
Skip blib/lib/TFBS/PatternGen/MEME.pm (unchanged)
Skip blib/lib/TFBS/Tools/SetOperations.pm (unchanged)
cp TFBS/PatternGen.pm blib/lib/TFBS/PatternGen.pm
cp TFBS/DB/TRANSFAC.pm blib/lib/TFBS/DB/TRANSFAC.pm
Skip blib/lib/TFBS/PatternI.pm (unchanged)
Skip blib/lib/TFBS/PatternGen/Gibbs.pm (unchanged)
Skip blib/lib/TFBS/PatternGenI.pm (unchanged)
cp TFBS/PatternGen/AnnSpec.pm blib/lib/TFBS/PatternGen/AnnSpec.pm
Skip blib/lib/TFBS/PatternGen/SimplePFM.pm (unchanged)
Skip blib/lib/TFBS/Matrix/PWM.pm (unchanged)
Skip blib/lib/TFBS/SiteSet.pm (unchanged)
cp TFBS/ConservationProfile.pm blib/lib/TFBS/ConservationProfile.pm
cp TFBS/Run/ConservationProfileGenerator.pm blib/lib/TFBS/Run/ConservationProfileGenerator.pm
Skip blib/lib/TFBS/PatternGen/Motif/Word.pm (unchanged)
Skip blib/lib/TFBS/PatternGen/AnnSpec/Motif.pm (unchanged)
cp TFBS/MatrixSet.pm blib/lib/TFBS/MatrixSet.pm
Skip blib/lib/TFBS/DB/JASPAR2.pm (unchanged)
Skip blib/lib/TFBS/Matrix/_Alignment.pm (unchanged)
Skip blib/lib/TFBS/PatternGen/YMF/Motif.pm (unchanged)
cp TFBS/DB/JASPAR6.pm blib/lib/TFBS/DB/JASPAR6.pm
cp TFBS/DB/JASPAR4.pm blib/lib/TFBS/DB/JASPAR4.pm
Skip blib/lib/TFBS/PatternGen/Motif/Matrix.pm (unchanged)
cp TFBS/PatternGen/YMF.pm blib/lib/TFBS/PatternGen/YMF.pm
Skip blib/lib/TFBS/DB.pm (unchanged)
Skip blib/lib/TFBS/PatternGen/MEME/Motif.pm (unchanged)
Skip blib/lib/TFBS/Site.pm (unchanged)
cp TFBS/DB/FlatFileDir.pm blib/lib/TFBS/DB/FlatFileDir.pm
cp TFBS/DB/JASPAR5.pm blib/lib/TFBS/DB/JASPAR5.pm
cp TFBS/TFFM.pm blib/lib/TFBS/TFFM.pm
Skip blib/lib/TFBS/PatternGen/Gibbs/Motif.pm (unchanged)
cp TFBS/Matrix.pm blib/lib/TFBS/Matrix.pm
Skip blib/lib/TFBS/SitePairSet.pm (unchanged)
cp TFBS/DB/JASPAR7.pm blib/lib/TFBS/DB/JASPAR7.pm
cp TFBS/README.md blib/lib/TFBS/README.md
Skip blib/lib/TFBS/PatternGen/Elph.pm (unchanged)
Please specify prototyping behavior for pwmsearch.xs (see perlxs manual)
mv pwmsearch.xsc pwmsearch.c
cp TFBS/_Iterator/_SiteSetIterator.pm blib/lib/TFBS/_Iterator/_SiteSetIterator.pm
Skip blib/lib/TFBS/Word.pm (unchanged)
Skip blib/lib/TFBS/_Iterator.pm (unchanged)
Skip blib/lib/TFBS/Word/Consensus.pm (unchanged)
cp TFBS/_Iterator/_MatrixSetIterator.pm blib/lib/TFBS/_Iterator/_MatrixSetIterator.pm
i686-linux-gnu-gcc -c -I. -I./lib -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -DVERSION=\"0.2\" -DXS_VERSION=\"0.2\" -fPIC "-I/usr/lib/i386-linux-gnu/perl/5.36/CORE" pwmsearch.c
In file included from pwmsearch.xs:4:
./lib/pwm_searchPFF.c: In function 'do_search':
./lib/pwm_searchPFF.c:55:7: warning: implicit declaration of function 'announce' [-Wimplicit-function-declaration]
55 | announce("+++\nEntering main.\n+++\n");
| ^~~~~~~~
./lib/pwm_searchPFF.c:74:9: warning: implicit declaration of function 'get_matrix' [-Wimplicit-function-declaration]
74 | if ( get_matrix(&args,pwm) )
| ^~~~~~~~~~
./lib/pwm_searchPFF.c:90:14: warning: implicit declaration of function 'loop_on_seqs' [-Wimplicit-function-declaration]
90 | else if ( loop_on_seqs(&args,pwm,fp,outfp) )
| ^~~~~~~~~~~~
./lib/pwm_searchPFF.c: At top level:
./lib/pwm_searchPFF.c:159:1: warning: return type defaults to 'int' [-Wimplicit-int]
159 | best_pull(pargs,pbase,pstrand,pscore)
| ^~~~~~~~~
./lib/pwm_searchPFF.c: In function 'do_seq':
./lib/pwm_searchPFF.c:229:18: warning: implicit declaration of function 'save_hit'; did you mean 'save_list'? [-Wimplicit-function-declaration]
229 | if ( save_hit(base,0,forward_score,hits,&nhit) )
| ^~~~~~~~
| save_list
./lib/pwm_searchPFF.c:239:20: warning: implicit declaration of function 'output' [-Wimplicit-function-declaration]
239 | else if ( output(pargs,seqid,base,seq,0,forward_score,outfp) )
| ^~~~~~
./lib/pwm_searchPFF.c: At top level:
./lib/pwm_searchPFF.c:526:1: warning: return type defaults to 'int' [-Wimplicit-int]
526 | get_sequence(fp,seq_id,sequence)
| ^~~~~~~~~~~~
rm -f ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so
i686-linux-gnu-gcc -g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1+ds=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -shared -L/usr/local/lib -fstack-protector-strong pwmsearch.o -o ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so \
-lm \
chmod 755 ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so
Manifying 1 pod document
make[2]: Leaving directory '/build/libtfbs-perl-0.7.1+ds/Ext'
Manifying 35 pod documents
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
prove --blib t/01_Matrix.t t/02_Search.t t/03_DB_FlatFileDir.t t/05_DB_JASPAR.t t/06_SimplePFM.t t/07_AnnSpec.t t/07_Elph.t t/07_Gibbs.t t/07_MEME.t t/08_DB_LocalTRANSFAC.t t/09_Word_Consensus.t t/10_Tools_SetOperations.t Ext/t/*.t
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/01_Matrix.t ............... ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/02_Search.t ............... ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/03_DB_FlatFileDir.t ....... ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/05_DB_JASPAR.t ............ ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/06_SimplePFM.t ............ ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/07_AnnSpec.t .............. ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/07_Elph.t ................. ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/07_Gibbs.t ................ ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/07_MEME.t ................. ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/08_DB_LocalTRANSFAC.t ..... ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/09_Word_Consensus.t ....... ok
Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1+ds/blib/lib/TFBS/Matrix/_Alignment.pm line 152.
t/10_Tools_SetOperations.t .. ok
Ext/t/pwmsearch.t ........... ok
All tests successful.
Files=13, Tests=45, 5 wallclock secs ( 0.09 usr 0.01 sys + 4.67 cusr 0.39 csys = 5.16 CPU)
Result: PASS
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary
dh binary
dh_testroot
dh_prep
dh_auto_install --destdir=debian/libtfbs-perl/
make -j8 install DESTDIR=/build/libtfbs-perl-0.7.1\+ds/debian/libtfbs-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
make[2]: Entering directory '/build/libtfbs-perl-0.7.1+ds/Ext'
"/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644
Manifying 1 pod document
make[2]: Leaving directory '/build/libtfbs-perl-0.7.1+ds/Ext'
Manifying 35 pod documents
Files found in blib/arch: installing files in blib/lib into architecture dependent library tree
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/auto/TFBS/Ext/pwmsearch/pwmsearch.bundle
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/auto/TFBS/Ext/pwmsearch/pwmsearch.so
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/pwm_searchPFF.c
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/pwm_search.h
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/README.md
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/MatrixSet.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternI.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/ConservationProfile.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/SitePairSet.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/SiteSet.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Word.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/_Iterator.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Site.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/TFFM.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/SitePair.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGenI.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Run/ConservationProfileGenerator.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix/_Alignment.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix/Alignment.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix/ICM.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix/PWM.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Matrix/PFM.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/AnnSpec.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/YMF.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Elph.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Gibbs.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/SimplePFM.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/MEME.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/YMF/Motif.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Gibbs/Motif.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/AnnSpec/Motif.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Motif/Matrix.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Motif/Word.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/MEME/Motif.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/PatternGen/Elph/Motif.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR5.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/LocalTRANSFAC.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR4.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR7.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR2.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/FlatFileDir.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/TRANSFAC.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/DB/JASPAR6.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/_Iterator/_SiteSetIterator.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/_Iterator/_MatrixSetIterator.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Ext/pwmsearch.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Word/Consensus.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/lib/i386-linux-gnu/perl5/5.36/TFBS/Tools/SetOperations.pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::MatrixSet.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PFM.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::SiteSet.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePairSet.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR6.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::Alignment.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR5.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternI.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Site.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word::Consensus.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::ICM.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR7.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR4.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePair.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR2.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::TFFM.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PWM.3pm
Installing /build/libtfbs-perl-0.7.1+ds/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF.3pm
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
dh_installdocs
dh_installchangelogs
debian/rules override_dh_installexamples
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
dh_installexamples
mkdir -p debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext
cp -a Ext/t debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext
for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \
sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \
done
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
dh_installman
dh_lintian
debian/rules override_dh_perl
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
dh_perl
dh_pdl
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
dh_link
dh_strip_nondeterminism
dh_compress
debian/rules override_dh_fixperms
make[1]: Entering directory '/build/libtfbs-perl-0.7.1+ds'
dh_fixperms
find debian -name pwmsearch.bundle -exec chmod -x \{\} \;
make[1]: Leaving directory '/build/libtfbs-perl-0.7.1+ds'
dh_missing
dh_dwz
dh_strip
dh_makeshlibs
dh_shlibdeps
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libtfbs-perl-dbgsym' in '../libtfbs-perl-dbgsym_0.7.1+ds-2_i386.deb'.
dpkg-deb: building package 'libtfbs-perl' in '../libtfbs-perl_0.7.1+ds-2_i386.deb'.
dpkg-genbuildinfo --build=binary -O../libtfbs-perl_0.7.1+ds-2_i386.buildinfo
dpkg-genchanges --build=binary -O../libtfbs-perl_0.7.1+ds-2_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/9941 and its subdirectories
I: Current time: Sat Apr 29 00:18:10 -12 2023
I: pbuilder-time-stamp: 1682770690