I: pbuilder: network access will be disabled during build
I: Current time: Wed May 15 02:51:35 -12 2024
I: pbuilder-time-stamp: 1715784695
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [seer_1.1.4-7.dsc]
I: copying [./seer_1.1.4.orig.tar.gz]
I: copying [./seer_1.1.4-7.debian.tar.xz]
I: Extracting source
gpgv: Signature made Sun Nov 6 02:42:46 2022 -12
gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA
gpgv: issuer "emollier@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify inline signature for ./seer_1.1.4-7.dsc: no acceptable signature found
dpkg-source: info: extracting seer in seer-1.1.4
dpkg-source: info: unpacking seer_1.1.4.orig.tar.gz
dpkg-source: info: unpacking seer_1.1.4-7.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying fix_lib_location.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying gcc11.patch
dpkg-source: info: applying typos.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/61614/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='i386'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16'
DISTRIBUTION='bookworm'
HOME='/root'
HOST_ARCH='i386'
IFS='
'
INVOCATION_ID='c2effa86703047e4b686c947f63dfb9e'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
LD_LIBRARY_PATH='/usr/lib/libeatmydata'
LD_PRELOAD='libeatmydata.so'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='61614'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.8oUQR4AR/pbuilderrc_6u5q --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.8oUQR4AR/b1 --logfile b1/build.log seer_1.1.4-7.dsc'
SUDO_GID='112'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://85.184.249.68:3128'
I: uname -a
Linux ionos6-i386 5.10.0-21-amd64 #1 SMP Debian 5.10.162-1 (2023-01-21) x86_64 GNU/Linux
I: ls -l /bin
total 6040
-rwxr-xr-x 1 root root 1408088 Feb 12 2023 bash
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep
-rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2
-rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover
lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore
-rwxr-xr-x 1 root root 42920 Sep 20 2022 cat
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp
-rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod
-rwxr-xr-x 1 root root 79816 Sep 20 2022 chown
-rwxr-xr-x 1 root root 162024 Sep 20 2022 cp
-rwxr-xr-x 1 root root 136916 Jan 5 2023 dash
-rwxr-xr-x 1 root root 137160 Sep 20 2022 date
-rwxr-xr-x 1 root root 100364 Sep 20 2022 dd
-rwxr-xr-x 1 root root 108940 Sep 20 2022 df
-rwxr-xr-x 1 root root 162152 Sep 20 2022 dir
-rwxr-xr-x 1 root root 87760 Mar 22 2023 dmesg
lrwxrwxrwx 1 root root 8 Dec 19 2022 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Dec 19 2022 domainname -> hostname
-rwxr-xr-x 1 root root 38760 Sep 20 2022 echo
-rwxr-xr-x 1 root root 41 Jan 24 2023 egrep
-rwxr-xr-x 1 root root 34664 Sep 20 2022 false
-rwxr-xr-x 1 root root 41 Jan 24 2023 fgrep
-rwxr-xr-x 1 root root 84272 Mar 22 2023 findmnt
-rwsr-xr-x 1 root root 30240 Mar 22 2023 fusermount
-rwxr-xr-x 1 root root 218680 Jan 24 2023 grep
-rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip
-rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe
-rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip
-rwxr-xr-x 1 root root 21916 Dec 19 2022 hostname
-rwxr-xr-x 1 root root 75756 Sep 20 2022 ln
-rwxr-xr-x 1 root root 55600 Mar 22 2023 login
-rwxr-xr-x 1 root root 162152 Sep 20 2022 ls
-rwxr-xr-x 1 root root 214568 Mar 22 2023 lsblk
-rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir
-rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod
-rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp
-rwxr-xr-x 1 root root 63016 Mar 22 2023 more
-rwsr-xr-x 1 root root 58912 Mar 22 2023 mount
-rwxr-xr-x 1 root root 13856 Mar 22 2023 mountpoint
-rwxr-xr-x 1 root root 157932 Sep 20 2022 mv
lrwxrwxrwx 1 root root 8 Dec 19 2022 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Dec 18 2022 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd
lrwxrwxrwx 1 root root 4 Feb 12 2023 rbash -> bash
-rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink
-rwxr-xr-x 1 root root 75720 Sep 20 2022 rm
-rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir
-rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts
-rwxr-xr-x 1 root root 133224 Jan 5 2023 sed
lrwxrwxrwx 1 root root 4 Jan 5 2023 sh -> dash
-rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep
-rwxr-xr-x 1 root root 87976 Sep 20 2022 stty
-rwsr-xr-x 1 root root 83492 Mar 22 2023 su
-rwxr-xr-x 1 root root 38792 Sep 20 2022 sync
-rwxr-xr-x 1 root root 602584 Feb 16 2021 tar
-rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile
-rwxr-xr-x 1 root root 120776 Sep 20 2022 touch
-rwxr-xr-x 1 root root 34664 Sep 20 2022 true
-rwxr-xr-x 1 root root 17892 Mar 22 2023 ulockmgr_server
-rwsr-xr-x 1 root root 30236 Mar 22 2023 umount
-rwxr-xr-x 1 root root 38760 Sep 20 2022 uname
-rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress
-rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir
-rwxr-xr-x 1 root root 71216 Mar 22 2023 wdctl
lrwxrwxrwx 1 root root 8 Dec 19 2022 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat
-rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp
-rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff
-rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep
-rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep
-rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce
-rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep
-rwxr-xr-x 1 root root 2206 Apr 9 2022 zless
-rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore
-rwxr-xr-x 1 root root 4577 Apr 9 2022 znew
I: user script /srv/workspace/pbuilder/61614/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), libarmadillo-dev, libdlib-dev, libhdf5-dev, libgzstream-dev, libboost-dev, libboost-program-options-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19604 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on libarmadillo-dev; however:
Package libarmadillo-dev is not installed.
pbuilder-satisfydepends-dummy depends on libdlib-dev; however:
Package libdlib-dev is not installed.
pbuilder-satisfydepends-dummy depends on libhdf5-dev; however:
Package libhdf5-dev is not installed.
pbuilder-satisfydepends-dummy depends on libgzstream-dev; however:
Package libgzstream-dev is not installed.
pbuilder-satisfydepends-dummy depends on libboost-dev; however:
Package libboost-dev is not installed.
pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however:
Package libboost-program-options-dev is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarmadillo-dev{a} libarmadillo11{a} libarpack2{a} libarpack2-dev{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost-program-options-dev{a} libboost-program-options1.74-dev{a} libboost-program-options1.74.0{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libcurl4{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libdlib-data{a} libdlib-dev{a} libdlib19.1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgzstream-dev{a} libgzstream0{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libhwloc15{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libllvm15{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libopencv-core-dev{a} libopencv-core406{a} libpciaccess0{a} libpipeline1{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libpthread-stubs0-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsqlite3-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsuperlu-dev{a} libsuperlu5{a} libsz2{a} libtbb-dev{a} libtbb12{a} libtbbbind-2-5{a} libtbbmalloc2{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxml2{a} libxshmfence1{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} pybind11-dev{a} sensible-utils{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
ca-certificates curl libarchive-cpio-perl libeigen3-dev libhwloc-plugins libldap-common libltdl-dev libmail-sendmail-perl libpng-tools libsasl2-modules lynx publicsuffix wget
0 packages upgraded, 133 newly installed, 0 to remove and 0 not upgraded.
Need to get 169 MB of archives. After unpacking 638 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB]
Get: 2 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB]
Get: 3 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB]
Get: 4 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB]
Get: 5 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB]
Get: 6 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 7 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB]
Get: 8 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB]
Get: 9 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB]
Get: 10 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB]
Get: 11 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB]
Get: 12 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB]
Get: 13 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB]
Get: 14 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB]
Get: 15 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB]
Get: 16 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB]
Get: 17 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB]
Get: 18 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 19 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 20 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B]
Get: 21 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get: 22 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get: 23 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB]
Get: 24 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB]
Get: 25 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB]
Get: 26 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.1+b3 [720 kB]
Get: 27 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB]
Get: 28 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 29 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 30 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB]
Get: 31 http://deb.debian.org/debian bookworm/main i386 hdf5-helpers i386 1.10.8+repack1-1 [27.9 kB]
Get: 32 http://deb.debian.org/debian bookworm/main i386 libaec0 i386 1.0.6-1+b1 [22.4 kB]
Get: 33 http://deb.debian.org/debian bookworm/main i386 libsz2 i386 1.0.6-1+b1 [7884 B]
Get: 34 http://deb.debian.org/debian bookworm/main i386 libaec-dev i386 1.0.6-1+b1 [21.5 kB]
Get: 35 http://deb.debian.org/debian bookworm/main i386 libblas3 i386 3.11.0-2 [139 kB]
Get: 36 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB]
Get: 37 http://deb.debian.org/debian bookworm/main i386 liblapack3 i386 3.11.0-2 [2092 kB]
Get: 38 http://deb.debian.org/debian bookworm/main i386 libarpack2 i386 3.8.0-3 [97.4 kB]
Get: 39 http://deb.debian.org/debian bookworm/main i386 libsuperlu5 i386 5.3.0+dfsg1-2+b1 [168 kB]
Get: 40 http://deb.debian.org/debian bookworm/main i386 libarmadillo11 i386 1:11.4.2+dfsg-1 [105 kB]
Get: 41 http://deb.debian.org/debian bookworm/main i386 libblas-dev i386 3.11.0-2 [151 kB]
Get: 42 http://deb.debian.org/debian bookworm/main i386 liblapack-dev i386 3.11.0-2 [4187 kB]
Get: 43 http://deb.debian.org/debian bookworm/main i386 libarpack2-dev i386 3.8.0-3 [117 kB]
Get: 44 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB]
Get: 45 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB]
Get: 46 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB]
Get: 47 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB]
Get: 48 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB]
Get: 49 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB]
Get: 50 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB]
Get: 51 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB]
Get: 52 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-7 [419 kB]
Get: 53 http://deb.debian.org/debian bookworm/main i386 libhdf5-103-1 i386 1.10.8+repack1-1 [1175 kB]
Get: 54 http://deb.debian.org/debian bookworm/main i386 libhdf5-fortran-102 i386 1.10.8+repack1-1 [101 kB]
Get: 55 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-100 i386 1.10.8+repack1-1 [79.3 kB]
Get: 56 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-fortran-100 i386 1.10.8+repack1-1 [46.2 kB]
Get: 57 http://deb.debian.org/debian bookworm/main i386 libhdf5-cpp-103-1 i386 1.10.8+repack1-1 [136 kB]
Get: 58 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-cpp-100 i386 1.10.8+repack1-1 [26.0 kB]
Get: 59 http://deb.debian.org/debian bookworm/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB]
Get: 60 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB]
Get: 61 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2 [304 kB]
Get: 62 http://deb.debian.org/debian bookworm/main i386 libjpeg-dev i386 1:2.1.5-2 [71.8 kB]
Get: 63 http://deb.debian.org/debian bookworm/main i386 libcurl4-openssl-dev i386 7.88.1-7 [533 kB]
Get: 64 http://deb.debian.org/debian bookworm/main i386 libssl-dev i386 3.0.8-1 [2487 kB]
Get: 65 http://deb.debian.org/debian bookworm/main i386 libhdf5-dev i386 1.10.8+repack1-1 [2754 kB]
Get: 66 http://deb.debian.org/debian bookworm/main i386 libsuperlu-dev i386 5.3.0+dfsg1-2+b1 [22.4 kB]
Get: 67 http://deb.debian.org/debian bookworm/main i386 libarmadillo-dev i386 1:11.4.2+dfsg-1 [403 kB]
Get: 68 http://deb.debian.org/debian bookworm/main i386 libboost1.74-dev i386 1.74.0+ds1-20 [9510 kB]
Get: 69 http://deb.debian.org/debian bookworm/main i386 libboost-dev i386 1.74.0.3 [4548 B]
Get: 70 http://deb.debian.org/debian bookworm/main i386 libboost-program-options1.74.0 i386 1.74.0+ds1-20 [338 kB]
Get: 71 http://deb.debian.org/debian bookworm/main i386 libboost-program-options1.74-dev i386 1.74.0+ds1-20 [368 kB]
Get: 72 http://deb.debian.org/debian bookworm/main i386 libboost-program-options-dev i386 1.74.0.3 [4344 B]
Get: 73 http://deb.debian.org/debian bookworm/main i386 libbsd0 i386 0.11.7-2 [121 kB]
Get: 74 http://deb.debian.org/debian bookworm/main i386 libdlib-data all 19.24+dfsg-1 [63.4 MB]
Get: 75 http://deb.debian.org/debian bookworm/main i386 libpng16-16 i386 1.6.39-2 [283 kB]
Get: 76 http://deb.debian.org/debian bookworm/main i386 libdlib19.1 i386 19.24+dfsg-1 [3766 kB]
Get: 77 http://deb.debian.org/debian bookworm/main i386 libglvnd0 i386 1.6.0-1 [42.7 kB]
Get: 78 http://deb.debian.org/debian bookworm/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB]
Get: 79 http://deb.debian.org/debian bookworm/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB]
Get: 80 http://deb.debian.org/debian bookworm/main i386 libxcb1 i386 1.15-1 [148 kB]
Get: 81 http://deb.debian.org/debian bookworm/main i386 libx11-data all 2:1.8.4-2 [292 kB]
Get: 82 http://deb.debian.org/debian bookworm/main i386 libx11-6 i386 2:1.8.4-2 [782 kB]
Get: 83 http://deb.debian.org/debian bookworm/main i386 libdrm-common all 2.4.114-1 [7112 B]
Get: 84 http://deb.debian.org/debian bookworm/main i386 libdrm2 i386 2.4.114-1+b1 [40.8 kB]
Get: 85 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB]
Get: 86 http://deb.debian.org/debian bookworm/main i386 libglapi-mesa i386 22.3.6-1+deb12u1 [35.6 kB]
Get: 87 http://deb.debian.org/debian bookworm/main i386 libx11-xcb1 i386 2:1.8.4-2 [192 kB]
Get: 88 http://deb.debian.org/debian bookworm/main i386 libxcb-dri2-0 i386 1.15-1 [107 kB]
Get: 89 http://deb.debian.org/debian bookworm/main i386 libxcb-dri3-0 i386 1.15-1 [107 kB]
Get: 90 http://deb.debian.org/debian bookworm/main i386 libxcb-glx0 i386 1.15-1 [124 kB]
Get: 91 http://deb.debian.org/debian bookworm/main i386 libxcb-present0 i386 1.15-1 [106 kB]
Get: 92 http://deb.debian.org/debian bookworm/main i386 libxcb-randr0 i386 1.15-1 [118 kB]
Get: 93 http://deb.debian.org/debian bookworm/main i386 libxcb-shm0 i386 1.15-1 [106 kB]
Get: 94 http://deb.debian.org/debian bookworm/main i386 libxcb-sync1 i386 1.15-1 [109 kB]
Get: 95 http://deb.debian.org/debian bookworm/main i386 libxcb-xfixes0 i386 1.15-1 [110 kB]
Get: 96 http://deb.debian.org/debian bookworm/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB]
Get: 97 http://deb.debian.org/debian bookworm/main i386 libxfixes3 i386 1:6.0.0-2 [23.0 kB]
Get: 98 http://deb.debian.org/debian bookworm/main i386 libxshmfence1 i386 1.3-1 [8976 B]
Get: 99 http://deb.debian.org/debian bookworm/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB]
Get: 100 http://deb.debian.org/debian bookworm/main i386 libdrm-amdgpu1 i386 2.4.114-1+b1 [24.1 kB]
Get: 101 http://deb.debian.org/debian bookworm/main i386 libpciaccess0 i386 0.17-2 [53.4 kB]
Get: 102 http://deb.debian.org/debian bookworm/main i386 libdrm-intel1 i386 2.4.114-1+b1 [67.9 kB]
Get: 103 http://deb.debian.org/debian bookworm/main i386 libdrm-nouveau2 i386 2.4.114-1+b1 [20.7 kB]
Get: 104 http://deb.debian.org/debian bookworm/main i386 libdrm-radeon1 i386 2.4.114-1+b1 [22.8 kB]
Get: 105 http://deb.debian.org/debian bookworm/main i386 libedit2 i386 3.1-20221030-2 [97.2 kB]
Get: 106 http://deb.debian.org/debian bookworm/main i386 libz3-4 i386 4.8.12-3.1 [7853 kB]
Get: 107 http://deb.debian.org/debian bookworm/main i386 libllvm15 i386 1:15.0.6-4+b1 [26.5 MB]
Get: 108 http://deb.debian.org/debian bookworm/main i386 libsensors-config all 1:3.6.0-7.1 [14.3 kB]
Get: 109 http://deb.debian.org/debian bookworm/main i386 libsensors5 i386 1:3.6.0-7.1 [35.1 kB]
Get: 110 http://deb.debian.org/debian bookworm/main i386 libgl1-mesa-dri i386 22.3.6-1+deb12u1 [7417 kB]
Get: 111 http://deb.debian.org/debian bookworm/main i386 libglx-mesa0 i386 22.3.6-1+deb12u1 [156 kB]
Get: 112 http://deb.debian.org/debian bookworm/main i386 libglx0 i386 1.6.0-1 [36.6 kB]
Get: 113 http://deb.debian.org/debian bookworm/main i386 libtbbmalloc2 i386 2021.8.0-1 [44.9 kB]
Get: 114 http://deb.debian.org/debian bookworm/main i386 libhwloc15 i386 2.9.0-1 [168 kB]
Get: 115 http://deb.debian.org/debian bookworm/main i386 libtbbbind-2-5 i386 2021.8.0-1 [13.5 kB]
Get: 116 http://deb.debian.org/debian bookworm/main i386 libtbb12 i386 2021.8.0-1 [81.1 kB]
Get: 117 http://deb.debian.org/debian bookworm/main i386 libopencv-core406 i386 4.6.0+dfsg-11 [1033 kB]
Get: 118 http://deb.debian.org/debian bookworm/main i386 libtbb-dev i386 2021.8.0-1 [191 kB]
Get: 119 http://deb.debian.org/debian bookworm/main i386 libopencv-core-dev i386 4.6.0+dfsg-11 [1765 kB]
Get: 120 http://deb.debian.org/debian bookworm/main i386 libpng-dev i386 1.6.39-2 [367 kB]
Get: 121 http://deb.debian.org/debian bookworm/main i386 libsqlite3-dev i386 3.40.1-2 [1105 kB]
Get: 122 http://deb.debian.org/debian bookworm/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 123 http://deb.debian.org/debian bookworm/main i386 x11proto-dev all 2022.1-1 [599 kB]
Get: 124 http://deb.debian.org/debian bookworm/main i386 libxau-dev i386 1:1.0.9-1 [23.3 kB]
Get: 125 http://deb.debian.org/debian bookworm/main i386 libxdmcp-dev i386 1:1.1.2-3 [42.7 kB]
Get: 126 http://deb.debian.org/debian bookworm/main i386 xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 127 http://deb.debian.org/debian bookworm/main i386 libpthread-stubs0-dev i386 0.4-1 [5340 B]
Get: 128 http://deb.debian.org/debian bookworm/main i386 libxcb1-dev i386 1.15-1 [185 kB]
Get: 129 http://deb.debian.org/debian bookworm/main i386 libx11-dev i386 2:1.8.4-2 [866 kB]
Get: 130 http://deb.debian.org/debian bookworm/main i386 pybind11-dev all 2.10.3-1 [186 kB]
Get: 131 http://deb.debian.org/debian bookworm/main i386 libdlib-dev i386 19.24+dfsg-1 [2086 kB]
Get: 132 http://deb.debian.org/debian bookworm/main i386 libgzstream0 i386 1.5+git20171107.9a20658-1+b2 [7444 B]
Get: 133 http://deb.debian.org/debian bookworm/main i386 libgzstream-dev i386 1.5+git20171107.9a20658-1+b2 [7688 B]
Fetched 169 MB in 4s (41.4 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package sensible-utils.
(Reading database ...
(Reading database ... 5%
(Reading database ... 10%
(Reading database ... 15%
(Reading database ... 20%
(Reading database ... 25%
(Reading database ... 30%
(Reading database ... 35%
(Reading database ... 40%
(Reading database ... 45%
(Reading database ... 50%
(Reading database ... 55%
(Reading database ... 60%
(Reading database ... 65%
(Reading database ... 70%
(Reading database ... 75%
(Reading database ... 80%
(Reading database ... 85%
(Reading database ... 90%
(Reading database ... 95%
(Reading database ... 100%
(Reading database ... 19604 files and directories currently installed.)
Preparing to unpack .../000-sensible-utils_0.0.17+nmu1_all.deb ...
Unpacking sensible-utils (0.0.17+nmu1) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../001-libmagic-mgc_1%3a5.44-3_i386.deb ...
Unpacking libmagic-mgc (1:5.44-3) ...
Selecting previously unselected package libmagic1:i386.
Preparing to unpack .../002-libmagic1_1%3a5.44-3_i386.deb ...
Unpacking libmagic1:i386 (1:5.44-3) ...
Selecting previously unselected package file.
Preparing to unpack .../003-file_1%3a5.44-3_i386.deb ...
Unpacking file (1:5.44-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../004-gettext-base_0.21-12_i386.deb ...
Unpacking gettext-base (0.21-12) ...
Selecting previously unselected package libuchardet0:i386.
Preparing to unpack .../005-libuchardet0_0.0.7-1_i386.deb ...
Unpacking libuchardet0:i386 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../006-groff-base_1.22.4-10_i386.deb ...
Unpacking groff-base (1.22.4-10) ...
Selecting previously unselected package bsdextrautils.
Preparing to unpack .../007-bsdextrautils_2.38.1-5+b1_i386.deb ...
Unpacking bsdextrautils (2.38.1-5+b1) ...
Selecting previously unselected package libpipeline1:i386.
Preparing to unpack .../008-libpipeline1_1.5.7-1_i386.deb ...
Unpacking libpipeline1:i386 (1.5.7-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../009-man-db_2.11.2-2_i386.deb ...
Unpacking man-db (2.11.2-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../010-m4_1.4.19-3_i386.deb ...
Unpacking m4 (1.4.19-3) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../011-autoconf_2.71-3_all.deb ...
Unpacking autoconf (2.71-3) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../012-autotools-dev_20220109.1_all.deb ...
Unpacking autotools-dev (20220109.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../013-automake_1%3a1.16.5-1.3_all.deb ...
Unpacking automake (1:1.16.5-1.3) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../014-autopoint_0.21-12_all.deb ...
Unpacking autopoint (0.21-12) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../015-libdebhelper-perl_13.11.4_all.deb ...
Unpacking libdebhelper-perl (13.11.4) ...
Selecting previously unselected package libtool.
Preparing to unpack .../016-libtool_2.4.7-5_all.deb ...
Unpacking libtool (2.4.7-5) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../017-dh-autoreconf_20_all.deb ...
Unpacking dh-autoreconf (20) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../018-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../019-libsub-override-perl_0.09-4_all.deb ...
Unpacking libsub-override-perl (0.09-4) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../020-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../021-dh-strip-nondeterminism_1.13.1-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.13.1-1) ...
Selecting previously unselected package libelf1:i386.
Preparing to unpack .../022-libelf1_0.188-2.1_i386.deb ...
Unpacking libelf1:i386 (0.188-2.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../023-dwz_0.15-1_i386.deb ...
Unpacking dwz (0.15-1) ...
Selecting previously unselected package libicu72:i386.
Preparing to unpack .../024-libicu72_72.1-3_i386.deb ...
Unpacking libicu72:i386 (72.1-3) ...
Selecting previously unselected package libxml2:i386.
Preparing to unpack .../025-libxml2_2.9.14+dfsg-1.1+b3_i386.deb ...
Unpacking libxml2:i386 (2.9.14+dfsg-1.1+b3) ...
Selecting previously unselected package gettext.
Preparing to unpack .../026-gettext_0.21-12_i386.deb ...
Unpacking gettext (0.21-12) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../027-intltool-debian_0.35.0+20060710.6_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.6) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../028-po-debconf_1.0.21+nmu1_all.deb ...
Unpacking po-debconf (1.0.21+nmu1) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../029-debhelper_13.11.4_all.deb ...
Unpacking debhelper (13.11.4) ...
Selecting previously unselected package hdf5-helpers.
Preparing to unpack .../030-hdf5-helpers_1.10.8+repack1-1_i386.deb ...
Unpacking hdf5-helpers (1.10.8+repack1-1) ...
Selecting previously unselected package libaec0:i386.
Preparing to unpack .../031-libaec0_1.0.6-1+b1_i386.deb ...
Unpacking libaec0:i386 (1.0.6-1+b1) ...
Selecting previously unselected package libsz2:i386.
Preparing to unpack .../032-libsz2_1.0.6-1+b1_i386.deb ...
Unpacking libsz2:i386 (1.0.6-1+b1) ...
Selecting previously unselected package libaec-dev:i386.
Preparing to unpack .../033-libaec-dev_1.0.6-1+b1_i386.deb ...
Unpacking libaec-dev:i386 (1.0.6-1+b1) ...
Selecting previously unselected package libblas3:i386.
Preparing to unpack .../034-libblas3_3.11.0-2_i386.deb ...
Unpacking libblas3:i386 (3.11.0-2) ...
Selecting previously unselected package libgfortran5:i386.
Preparing to unpack .../035-libgfortran5_12.2.0-14_i386.deb ...
Unpacking libgfortran5:i386 (12.2.0-14) ...
Selecting previously unselected package liblapack3:i386.
Preparing to unpack .../036-liblapack3_3.11.0-2_i386.deb ...
Unpacking liblapack3:i386 (3.11.0-2) ...
Selecting previously unselected package libarpack2:i386.
Preparing to unpack .../037-libarpack2_3.8.0-3_i386.deb ...
Unpacking libarpack2:i386 (3.8.0-3) ...
Selecting previously unselected package libsuperlu5:i386.
Preparing to unpack .../038-libsuperlu5_5.3.0+dfsg1-2+b1_i386.deb ...
Unpacking libsuperlu5:i386 (5.3.0+dfsg1-2+b1) ...
Selecting previously unselected package libarmadillo11.
Preparing to unpack .../039-libarmadillo11_1%3a11.4.2+dfsg-1_i386.deb ...
Unpacking libarmadillo11 (1:11.4.2+dfsg-1) ...
Selecting previously unselected package libblas-dev:i386.
Preparing to unpack .../040-libblas-dev_3.11.0-2_i386.deb ...
Unpacking libblas-dev:i386 (3.11.0-2) ...
Selecting previously unselected package liblapack-dev:i386.
Preparing to unpack .../041-liblapack-dev_3.11.0-2_i386.deb ...
Unpacking liblapack-dev:i386 (3.11.0-2) ...
Selecting previously unselected package libarpack2-dev:i386.
Preparing to unpack .../042-libarpack2-dev_3.8.0-3_i386.deb ...
Unpacking libarpack2-dev:i386 (3.8.0-3) ...
Selecting previously unselected package libbrotli1:i386.
Preparing to unpack .../043-libbrotli1_1.0.9-2+b6_i386.deb ...
Unpacking libbrotli1:i386 (1.0.9-2+b6) ...
Selecting previously unselected package libsasl2-modules-db:i386.
Preparing to unpack .../044-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ...
Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg-10) ...
Selecting previously unselected package libsasl2-2:i386.
Preparing to unpack .../045-libsasl2-2_2.1.28+dfsg-10_i386.deb ...
Unpacking libsasl2-2:i386 (2.1.28+dfsg-10) ...
Selecting previously unselected package libldap-2.5-0:i386.
Preparing to unpack .../046-libldap-2.5-0_2.5.13+dfsg-5_i386.deb ...
Unpacking libldap-2.5-0:i386 (2.5.13+dfsg-5) ...
Selecting previously unselected package libnghttp2-14:i386.
Preparing to unpack .../047-libnghttp2-14_1.52.0-1_i386.deb ...
Unpacking libnghttp2-14:i386 (1.52.0-1) ...
Selecting previously unselected package libpsl5:i386.
Preparing to unpack .../048-libpsl5_0.21.2-1_i386.deb ...
Unpacking libpsl5:i386 (0.21.2-1) ...
Selecting previously unselected package librtmp1:i386.
Preparing to unpack .../049-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ...
Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ...
Selecting previously unselected package libssh2-1:i386.
Preparing to unpack .../050-libssh2-1_1.10.0-3+b1_i386.deb ...
Unpacking libssh2-1:i386 (1.10.0-3+b1) ...
Selecting previously unselected package libcurl4:i386.
Preparing to unpack .../051-libcurl4_7.88.1-7_i386.deb ...
Unpacking libcurl4:i386 (7.88.1-7) ...
Selecting previously unselected package libhdf5-103-1:i386.
Preparing to unpack .../052-libhdf5-103-1_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-103-1:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package libhdf5-fortran-102:i386.
Preparing to unpack .../053-libhdf5-fortran-102_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-fortran-102:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package libhdf5-hl-100:i386.
Preparing to unpack .../054-libhdf5-hl-100_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-hl-100:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package libhdf5-hl-fortran-100:i386.
Preparing to unpack .../055-libhdf5-hl-fortran-100_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-hl-fortran-100:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package libhdf5-cpp-103-1:i386.
Preparing to unpack .../056-libhdf5-cpp-103-1_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-cpp-103-1:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package libhdf5-hl-cpp-100:i386.
Preparing to unpack .../057-libhdf5-hl-cpp-100_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-hl-cpp-100:i386 (1.10.8+repack1-1) ...
Selecting previously unselected package zlib1g-dev:i386.
Preparing to unpack .../058-zlib1g-dev_1%3a1.2.13.dfsg-1_i386.deb ...
Unpacking zlib1g-dev:i386 (1:1.2.13.dfsg-1) ...
Selecting previously unselected package libjpeg62-turbo:i386.
Preparing to unpack .../059-libjpeg62-turbo_1%3a2.1.5-2_i386.deb ...
Unpacking libjpeg62-turbo:i386 (1:2.1.5-2) ...
Selecting previously unselected package libjpeg62-turbo-dev:i386.
Preparing to unpack .../060-libjpeg62-turbo-dev_1%3a2.1.5-2_i386.deb ...
Unpacking libjpeg62-turbo-dev:i386 (1:2.1.5-2) ...
Selecting previously unselected package libjpeg-dev:i386.
Preparing to unpack .../061-libjpeg-dev_1%3a2.1.5-2_i386.deb ...
Unpacking libjpeg-dev:i386 (1:2.1.5-2) ...
Selecting previously unselected package libcurl4-openssl-dev:i386.
Preparing to unpack .../062-libcurl4-openssl-dev_7.88.1-7_i386.deb ...
Unpacking libcurl4-openssl-dev:i386 (7.88.1-7) ...
Selecting previously unselected package libssl-dev:i386.
Preparing to unpack .../063-libssl-dev_3.0.8-1_i386.deb ...
Unpacking libssl-dev:i386 (3.0.8-1) ...
Selecting previously unselected package libhdf5-dev.
Preparing to unpack .../064-libhdf5-dev_1.10.8+repack1-1_i386.deb ...
Unpacking libhdf5-dev (1.10.8+repack1-1) ...
Selecting previously unselected package libsuperlu-dev:i386.
Preparing to unpack .../065-libsuperlu-dev_5.3.0+dfsg1-2+b1_i386.deb ...
Unpacking libsuperlu-dev:i386 (5.3.0+dfsg1-2+b1) ...
Selecting previously unselected package libarmadillo-dev.
Preparing to unpack .../066-libarmadillo-dev_1%3a11.4.2+dfsg-1_i386.deb ...
Unpacking libarmadillo-dev (1:11.4.2+dfsg-1) ...
Selecting previously unselected package libboost1.74-dev:i386.
Preparing to unpack .../067-libboost1.74-dev_1.74.0+ds1-20_i386.deb ...
Unpacking libboost1.74-dev:i386 (1.74.0+ds1-20) ...
Selecting previously unselected package libboost-dev:i386.
Preparing to unpack .../068-libboost-dev_1.74.0.3_i386.deb ...
Unpacking libboost-dev:i386 (1.74.0.3) ...
Selecting previously unselected package libboost-program-options1.74.0:i386.
Preparing to unpack .../069-libboost-program-options1.74.0_1.74.0+ds1-20_i386.deb ...
Unpacking libboost-program-options1.74.0:i386 (1.74.0+ds1-20) ...
Selecting previously unselected package libboost-program-options1.74-dev:i386.
Preparing to unpack .../070-libboost-program-options1.74-dev_1.74.0+ds1-20_i386.deb ...
Unpacking libboost-program-options1.74-dev:i386 (1.74.0+ds1-20) ...
Selecting previously unselected package libboost-program-options-dev:i386.
Preparing to unpack .../071-libboost-program-options-dev_1.74.0.3_i386.deb ...
Unpacking libboost-program-options-dev:i386 (1.74.0.3) ...
Selecting previously unselected package libbsd0:i386.
Preparing to unpack .../072-libbsd0_0.11.7-2_i386.deb ...
Unpacking libbsd0:i386 (0.11.7-2) ...
Selecting previously unselected package libdlib-data.
Preparing to unpack .../073-libdlib-data_19.24+dfsg-1_all.deb ...
Unpacking libdlib-data (19.24+dfsg-1) ...
Selecting previously unselected package libpng16-16:i386.
Preparing to unpack .../074-libpng16-16_1.6.39-2_i386.deb ...
Unpacking libpng16-16:i386 (1.6.39-2) ...
Selecting previously unselected package libdlib19.1:i386.
Preparing to unpack .../075-libdlib19.1_19.24+dfsg-1_i386.deb ...
Unpacking libdlib19.1:i386 (19.24+dfsg-1) ...
Selecting previously unselected package libglvnd0:i386.
Preparing to unpack .../076-libglvnd0_1.6.0-1_i386.deb ...
Unpacking libglvnd0:i386 (1.6.0-1) ...
Selecting previously unselected package libxau6:i386.
Preparing to unpack .../077-libxau6_1%3a1.0.9-1_i386.deb ...
Unpacking libxau6:i386 (1:1.0.9-1) ...
Selecting previously unselected package libxdmcp6:i386.
Preparing to unpack .../078-libxdmcp6_1%3a1.1.2-3_i386.deb ...
Unpacking libxdmcp6:i386 (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:i386.
Preparing to unpack .../079-libxcb1_1.15-1_i386.deb ...
Unpacking libxcb1:i386 (1.15-1) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../080-libx11-data_2%3a1.8.4-2_all.deb ...
Unpacking libx11-data (2:1.8.4-2) ...
Selecting previously unselected package libx11-6:i386.
Preparing to unpack .../081-libx11-6_2%3a1.8.4-2_i386.deb ...
Unpacking libx11-6:i386 (2:1.8.4-2) ...
Selecting previously unselected package libdrm-common.
Preparing to unpack .../082-libdrm-common_2.4.114-1_all.deb ...
Unpacking libdrm-common (2.4.114-1) ...
Selecting previously unselected package libdrm2:i386.
Preparing to unpack .../083-libdrm2_2.4.114-1+b1_i386.deb ...
Unpacking libdrm2:i386 (2.4.114-1+b1) ...
Selecting previously unselected package libexpat1:i386.
Preparing to unpack .../084-libexpat1_2.5.0-1_i386.deb ...
Unpacking libexpat1:i386 (2.5.0-1) ...
Selecting previously unselected package libglapi-mesa:i386.
Preparing to unpack .../085-libglapi-mesa_22.3.6-1+deb12u1_i386.deb ...
Unpacking libglapi-mesa:i386 (22.3.6-1+deb12u1) ...
Selecting previously unselected package libx11-xcb1:i386.
Preparing to unpack .../086-libx11-xcb1_2%3a1.8.4-2_i386.deb ...
Unpacking libx11-xcb1:i386 (2:1.8.4-2) ...
Selecting previously unselected package libxcb-dri2-0:i386.
Preparing to unpack .../087-libxcb-dri2-0_1.15-1_i386.deb ...
Unpacking libxcb-dri2-0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-dri3-0:i386.
Preparing to unpack .../088-libxcb-dri3-0_1.15-1_i386.deb ...
Unpacking libxcb-dri3-0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-glx0:i386.
Preparing to unpack .../089-libxcb-glx0_1.15-1_i386.deb ...
Unpacking libxcb-glx0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-present0:i386.
Preparing to unpack .../090-libxcb-present0_1.15-1_i386.deb ...
Unpacking libxcb-present0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-randr0:i386.
Preparing to unpack .../091-libxcb-randr0_1.15-1_i386.deb ...
Unpacking libxcb-randr0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-shm0:i386.
Preparing to unpack .../092-libxcb-shm0_1.15-1_i386.deb ...
Unpacking libxcb-shm0:i386 (1.15-1) ...
Selecting previously unselected package libxcb-sync1:i386.
Preparing to unpack .../093-libxcb-sync1_1.15-1_i386.deb ...
Unpacking libxcb-sync1:i386 (1.15-1) ...
Selecting previously unselected package libxcb-xfixes0:i386.
Preparing to unpack .../094-libxcb-xfixes0_1.15-1_i386.deb ...
Unpacking libxcb-xfixes0:i386 (1.15-1) ...
Selecting previously unselected package libxext6:i386.
Preparing to unpack .../095-libxext6_2%3a1.3.4-1+b1_i386.deb ...
Unpacking libxext6:i386 (2:1.3.4-1+b1) ...
Selecting previously unselected package libxfixes3:i386.
Preparing to unpack .../096-libxfixes3_1%3a6.0.0-2_i386.deb ...
Unpacking libxfixes3:i386 (1:6.0.0-2) ...
Selecting previously unselected package libxshmfence1:i386.
Preparing to unpack .../097-libxshmfence1_1.3-1_i386.deb ...
Unpacking libxshmfence1:i386 (1.3-1) ...
Selecting previously unselected package libxxf86vm1:i386.
Preparing to unpack .../098-libxxf86vm1_1%3a1.1.4-1+b2_i386.deb ...
Unpacking libxxf86vm1:i386 (1:1.1.4-1+b2) ...
Selecting previously unselected package libdrm-amdgpu1:i386.
Preparing to unpack .../099-libdrm-amdgpu1_2.4.114-1+b1_i386.deb ...
Unpacking libdrm-amdgpu1:i386 (2.4.114-1+b1) ...
Selecting previously unselected package libpciaccess0:i386.
Preparing to unpack .../100-libpciaccess0_0.17-2_i386.deb ...
Unpacking libpciaccess0:i386 (0.17-2) ...
Selecting previously unselected package libdrm-intel1:i386.
Preparing to unpack .../101-libdrm-intel1_2.4.114-1+b1_i386.deb ...
Unpacking libdrm-intel1:i386 (2.4.114-1+b1) ...
Selecting previously unselected package libdrm-nouveau2:i386.
Preparing to unpack .../102-libdrm-nouveau2_2.4.114-1+b1_i386.deb ...
Unpacking libdrm-nouveau2:i386 (2.4.114-1+b1) ...
Selecting previously unselected package libdrm-radeon1:i386.
Preparing to unpack .../103-libdrm-radeon1_2.4.114-1+b1_i386.deb ...
Unpacking libdrm-radeon1:i386 (2.4.114-1+b1) ...
Selecting previously unselected package libedit2:i386.
Preparing to unpack .../104-libedit2_3.1-20221030-2_i386.deb ...
Unpacking libedit2:i386 (3.1-20221030-2) ...
Selecting previously unselected package libz3-4:i386.
Preparing to unpack .../105-libz3-4_4.8.12-3.1_i386.deb ...
Unpacking libz3-4:i386 (4.8.12-3.1) ...
Selecting previously unselected package libllvm15:i386.
Preparing to unpack .../106-libllvm15_1%3a15.0.6-4+b1_i386.deb ...
Unpacking libllvm15:i386 (1:15.0.6-4+b1) ...
Selecting previously unselected package libsensors-config.
Preparing to unpack .../107-libsensors-config_1%3a3.6.0-7.1_all.deb ...
Unpacking libsensors-config (1:3.6.0-7.1) ...
Selecting previously unselected package libsensors5:i386.
Preparing to unpack .../108-libsensors5_1%3a3.6.0-7.1_i386.deb ...
Unpacking libsensors5:i386 (1:3.6.0-7.1) ...
Selecting previously unselected package libgl1-mesa-dri:i386.
Preparing to unpack .../109-libgl1-mesa-dri_22.3.6-1+deb12u1_i386.deb ...
Unpacking libgl1-mesa-dri:i386 (22.3.6-1+deb12u1) ...
Selecting previously unselected package libglx-mesa0:i386.
Preparing to unpack .../110-libglx-mesa0_22.3.6-1+deb12u1_i386.deb ...
Unpacking libglx-mesa0:i386 (22.3.6-1+deb12u1) ...
Selecting previously unselected package libglx0:i386.
Preparing to unpack .../111-libglx0_1.6.0-1_i386.deb ...
Unpacking libglx0:i386 (1.6.0-1) ...
Selecting previously unselected package libtbbmalloc2:i386.
Preparing to unpack .../112-libtbbmalloc2_2021.8.0-1_i386.deb ...
Unpacking libtbbmalloc2:i386 (2021.8.0-1) ...
Selecting previously unselected package libhwloc15:i386.
Preparing to unpack .../113-libhwloc15_2.9.0-1_i386.deb ...
Unpacking libhwloc15:i386 (2.9.0-1) ...
Selecting previously unselected package libtbbbind-2-5:i386.
Preparing to unpack .../114-libtbbbind-2-5_2021.8.0-1_i386.deb ...
Unpacking libtbbbind-2-5:i386 (2021.8.0-1) ...
Selecting previously unselected package libtbb12:i386.
Preparing to unpack .../115-libtbb12_2021.8.0-1_i386.deb ...
Unpacking libtbb12:i386 (2021.8.0-1) ...
Selecting previously unselected package libopencv-core406:i386.
Preparing to unpack .../116-libopencv-core406_4.6.0+dfsg-11_i386.deb ...
Unpacking libopencv-core406:i386 (4.6.0+dfsg-11) ...
Selecting previously unselected package libtbb-dev:i386.
Preparing to unpack .../117-libtbb-dev_2021.8.0-1_i386.deb ...
Unpacking libtbb-dev:i386 (2021.8.0-1) ...
Selecting previously unselected package libopencv-core-dev:i386.
Preparing to unpack .../118-libopencv-core-dev_4.6.0+dfsg-11_i386.deb ...
Unpacking libopencv-core-dev:i386 (4.6.0+dfsg-11) ...
Selecting previously unselected package libpng-dev:i386.
Preparing to unpack .../119-libpng-dev_1.6.39-2_i386.deb ...
Unpacking libpng-dev:i386 (1.6.39-2) ...
Selecting previously unselected package libsqlite3-dev:i386.
Preparing to unpack .../120-libsqlite3-dev_3.40.1-2_i386.deb ...
Unpacking libsqlite3-dev:i386 (3.40.1-2) ...
Selecting previously unselected package xorg-sgml-doctools.
Preparing to unpack .../121-xorg-sgml-doctools_1%3a1.11-1.1_all.deb ...
Unpacking xorg-sgml-doctools (1:1.11-1.1) ...
Selecting previously unselected package x11proto-dev.
Preparing to unpack .../122-x11proto-dev_2022.1-1_all.deb ...
Unpacking x11proto-dev (2022.1-1) ...
Selecting previously unselected package libxau-dev:i386.
Preparing to unpack .../123-libxau-dev_1%3a1.0.9-1_i386.deb ...
Unpacking libxau-dev:i386 (1:1.0.9-1) ...
Selecting previously unselected package libxdmcp-dev:i386.
Preparing to unpack .../124-libxdmcp-dev_1%3a1.1.2-3_i386.deb ...
Unpacking libxdmcp-dev:i386 (1:1.1.2-3) ...
Selecting previously unselected package xtrans-dev.
Preparing to unpack .../125-xtrans-dev_1.4.0-1_all.deb ...
Unpacking xtrans-dev (1.4.0-1) ...
Selecting previously unselected package libpthread-stubs0-dev:i386.
Preparing to unpack .../126-libpthread-stubs0-dev_0.4-1_i386.deb ...
Unpacking libpthread-stubs0-dev:i386 (0.4-1) ...
Selecting previously unselected package libxcb1-dev:i386.
Preparing to unpack .../127-libxcb1-dev_1.15-1_i386.deb ...
Unpacking libxcb1-dev:i386 (1.15-1) ...
Selecting previously unselected package libx11-dev:i386.
Preparing to unpack .../128-libx11-dev_2%3a1.8.4-2_i386.deb ...
Unpacking libx11-dev:i386 (2:1.8.4-2) ...
Selecting previously unselected package pybind11-dev.
Preparing to unpack .../129-pybind11-dev_2.10.3-1_all.deb ...
Unpacking pybind11-dev (2.10.3-1) ...
Selecting previously unselected package libdlib-dev:i386.
Preparing to unpack .../130-libdlib-dev_19.24+dfsg-1_i386.deb ...
Unpacking libdlib-dev:i386 (19.24+dfsg-1) ...
Selecting previously unselected package libgzstream0:i386.
Preparing to unpack .../131-libgzstream0_1.5+git20171107.9a20658-1+b2_i386.deb ...
Unpacking libgzstream0:i386 (1.5+git20171107.9a20658-1+b2) ...
Selecting previously unselected package libgzstream-dev:i386.
Preparing to unpack .../132-libgzstream-dev_1.5+git20171107.9a20658-1+b2_i386.deb ...
Unpacking libgzstream-dev:i386 (1.5+git20171107.9a20658-1+b2) ...
Setting up libexpat1:i386 (2.5.0-1) ...
Setting up libpipeline1:i386 (1.5.7-1) ...
Setting up libtbbmalloc2:i386 (2021.8.0-1) ...
Setting up libpciaccess0:i386 (0.17-2) ...
Setting up libxau6:i386 (1:1.0.9-1) ...
Setting up libpsl5:i386 (0.21.2-1) ...
Setting up libboost1.74-dev:i386 (1.74.0+ds1-20) ...
Setting up libicu72:i386 (72.1-3) ...
Setting up bsdextrautils (2.38.1-5+b1) ...
Setting up hdf5-helpers (1.10.8+repack1-1) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libglvnd0:i386 (1.6.0-1) ...
Setting up libboost-program-options1.74.0:i386 (1.74.0+ds1-20) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up libbrotli1:i386 (1.0.9-2+b6) ...
Setting up libsensors-config (1:3.6.0-7.1) ...
Setting up libnghttp2-14:i386 (1.52.0-1) ...
Setting up libmagic1:i386 (1:5.44-3) ...
Setting up gettext-base (0.21-12) ...
Setting up m4 (1.4.19-3) ...
Setting up file (1:5.44-3) ...
Setting up libpthread-stubs0-dev:i386 (0.4-1) ...
Setting up pybind11-dev (2.10.3-1) ...
Setting up libaec0:i386 (1.0.6-1+b1) ...
Setting up libboost-program-options1.74-dev:i386 (1.74.0+ds1-20) ...
Setting up libsasl2-modules-db:i386 (2.1.28+dfsg-10) ...
Setting up xtrans-dev (1.4.0-1) ...
Setting up autotools-dev (20220109.1) ...
Setting up libz3-4:i386 (4.8.12-3.1) ...
Setting up libblas3:i386 (3.11.0-2) ...
update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode
Setting up libjpeg62-turbo:i386 (1:2.1.5-2) ...
Setting up libsqlite3-dev:i386 (3.40.1-2) ...
Setting up libboost-program-options-dev:i386 (1.74.0.3) ...
Setting up libx11-data (2:1.8.4-2) ...
Setting up libjpeg62-turbo-dev:i386 (1:2.1.5-2) ...
Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libssl-dev:i386 (3.0.8-1) ...
Setting up libpng16-16:i386 (1.6.39-2) ...
Setting up libhwloc15:i386 (2.9.0-1) ...
Setting up autopoint (0.21-12) ...
Setting up libsensors5:i386 (1:3.6.0-7.1) ...
Setting up libglapi-mesa:i386 (22.3.6-1+deb12u1) ...
Setting up libsasl2-2:i386 (2.1.28+dfsg-10) ...
Setting up libgfortran5:i386 (12.2.0-14) ...
Setting up autoconf (2.71-3) ...
Setting up libgzstream0:i386 (1.5+git20171107.9a20658-1+b2) ...
Setting up zlib1g-dev:i386 (1:1.2.13.dfsg-1) ...
Setting up sensible-utils (0.0.17+nmu1) ...
Setting up libxshmfence1:i386 (1.3-1) ...
Setting up libuchardet0:i386 (0.0.7-1) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libssh2-1:i386 (1.10.0-3+b1) ...
Setting up xorg-sgml-doctools (1:1.11-1.1) ...
Setting up libboost-dev:i386 (1.74.0.3) ...
Setting up libbsd0:i386 (0.11.7-2) ...
Setting up libdrm-common (2.4.114-1) ...
Setting up libelf1:i386 (0.188-2.1) ...
Setting up libxml2:i386 (2.9.14+dfsg-1.1+b3) ...
Setting up libdlib-data (19.24+dfsg-1) ...
Setting up libblas-dev:i386 (3.11.0-2) ...
update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode
Setting up libsz2:i386 (1.0.6-1+b1) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up x11proto-dev (2022.1-1) ...
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up libxdmcp6:i386 (1:1.1.2-3) ...
Setting up liblapack3:i386 (3.11.0-2) ...
update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode
Setting up libxcb1:i386 (1.15-1) ...
Setting up gettext (0.21-12) ...
Setting up libxcb-xfixes0:i386 (1.15-1) ...
Setting up libxau-dev:i386 (1:1.0.9-1) ...
Setting up libtool (2.4.7-5) ...
Setting up libxcb-glx0:i386 (1.15-1) ...
Setting up libdlib19.1:i386 (19.24+dfsg-1) ...
Setting up libedit2:i386 (3.1-20221030-2) ...
Setting up libpng-dev:i386 (1.6.39-2) ...
Setting up libaec-dev:i386 (1.0.6-1+b1) ...
Setting up libarpack2:i386 (3.8.0-3) ...
Setting up libjpeg-dev:i386 (1:2.1.5-2) ...
Setting up libsuperlu5:i386 (5.3.0+dfsg1-2+b1) ...
Setting up libxcb-shm0:i386 (1.15-1) ...
Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ...
Setting up libtbbbind-2-5:i386 (2021.8.0-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up libxcb-present0:i386 (1.15-1) ...
Setting up libgzstream-dev:i386 (1.5+git20171107.9a20658-1+b2) ...
Setting up dh-autoreconf (20) ...
Setting up libxdmcp-dev:i386 (1:1.1.2-3) ...
Setting up libxcb-sync1:i386 (1.15-1) ...
Setting up liblapack-dev:i386 (3.11.0-2) ...
update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode
Setting up libxcb-dri2-0:i386 (1.15-1) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up libdrm2:i386 (2.4.114-1+b1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-10) ...
Setting up libxcb-randr0:i386 (1.15-1) ...
Setting up libllvm15:i386 (1:15.0.6-4+b1) ...
Setting up libcurl4:i386 (7.88.1-7) ...
Setting up libx11-6:i386 (2:1.8.4-2) ...
Setting up libsuperlu-dev:i386 (5.3.0+dfsg1-2+b1) ...
Setting up libdrm-amdgpu1:i386 (2.4.114-1+b1) ...
Setting up libxcb-dri3-0:i386 (1.15-1) ...
Setting up libx11-xcb1:i386 (2:1.8.4-2) ...
Setting up libdrm-nouveau2:i386 (2.4.114-1+b1) ...
Setting up libarpack2-dev:i386 (3.8.0-3) ...
Setting up libxcb1-dev:i386 (1.15-1) ...
Setting up libarmadillo11 (1:11.4.2+dfsg-1) ...
Setting up libdrm-radeon1:i386 (2.4.114-1+b1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libdrm-intel1:i386 (2.4.114-1+b1) ...
Setting up libgl1-mesa-dri:i386 (22.3.6-1+deb12u1) ...
Setting up libx11-dev:i386 (2:1.8.4-2) ...
Setting up libxext6:i386 (2:1.3.4-1+b1) ...
Setting up libtbb12:i386 (2021.8.0-1) ...
Setting up man-db (2.11.2-2) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ...
Setting up libxfixes3:i386 (1:6.0.0-2) ...
Setting up libcurl4-openssl-dev:i386 (7.88.1-7) ...
Setting up libhdf5-103-1:i386 (1.10.8+repack1-1) ...
Setting up libhdf5-cpp-103-1:i386 (1.10.8+repack1-1) ...
Setting up libtbb-dev:i386 (2021.8.0-1) ...
Setting up libhdf5-hl-100:i386 (1.10.8+repack1-1) ...
Setting up libglx-mesa0:i386 (22.3.6-1+deb12u1) ...
Setting up libglx0:i386 (1.6.0-1) ...
Setting up debhelper (13.11.4) ...
Setting up libhdf5-hl-cpp-100:i386 (1.10.8+repack1-1) ...
Setting up libhdf5-fortran-102:i386 (1.10.8+repack1-1) ...
Setting up libhdf5-hl-fortran-100:i386 (1.10.8+repack1-1) ...
Setting up libopencv-core406:i386 (4.6.0+dfsg-11) ...
Setting up libhdf5-dev (1.10.8+repack1-1) ...
update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up libopencv-core-dev:i386 (4.6.0+dfsg-11) ...
Setting up libarmadillo-dev (1:11.4.2+dfsg-1) ...
Setting up libdlib-dev:i386 (19.24+dfsg-1) ...
Processing triggers for libc-bin (2.36-8) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/seer-1.1.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seer_1.1.4-7_source.changes
dpkg-buildpackage: info: source package seer
dpkg-buildpackage: info: source version 1.1.4-7
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Étienne Mollier <emollier@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
debian/rules clean
dh clean
dh_auto_clean
make -j16 clean
make[1]: Entering directory '/build/seer-1.1.4'
cd src && make clean
make[2]: Entering directory '/build/seer-1.1.4/src'
rm -f *.o ~* seer kmds map_back combineKmers filter_seer
make[2]: Leaving directory '/build/seer-1.1.4/src'
cd test && make clean
make[2]: Entering directory '/build/seer-1.1.4/test'
rm -f *.o ~* tests_passed
make[2]: Leaving directory '/build/seer-1.1.4/test'
make[1]: Leaving directory '/build/seer-1.1.4'
dh_clean
debian/rules binary
dh binary
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/seer-1.1.4'
dh_auto_build -- LDFLAGS+=-L/usr/lib/i386-linux-gnu/hdf5/serial
make -j16 "INSTALL=install --strip-program=true" LDFLAGS\+=-L/usr/lib/i386-linux-gnu/hdf5/serial
make[2]: Entering directory '/build/seer-1.1.4'
cd src && make all
make[3]: Entering directory '/build/seer-1.1.4/src'
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o sample.o sample.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o significant_kmer.o significant_kmer.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o kmer.o kmer.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o covar.o covar.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerCommon.o seerCommon.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerErr.o seerErr.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerIO.o seerIO.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerBasicFilter.o seerBasicFilter.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerMain.o seerMain.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerCmdLine.o seerCmdLine.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerStats.o seerStats.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerContinuousAssoc.o seerContinuousAssoc.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o seerBinaryAssoc.o seerBinaryAssoc.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o logitFunction.o logitFunction.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o linearFunction.o linearFunction.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o kmdsMain.o kmdsMain.cpp
In file included from /usr/include/armadillo:22,
from kmer.hpp:9,
from kmer.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o kmdsStruct.o kmdsStruct.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o kmdsCmdLine.o kmdsCmdLine.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o fasta.o fasta.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o mapMain.o mapMain.cpp
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from seerBasicFilter.cpp:10:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from seer.hpp:10,
from seerMain.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from linearFunction.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from logitFunction.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from seerCommon.cpp:9:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from seer.hpp:10,
from seerContinuousAssoc.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from seerErr.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from seerIO.cpp:12:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from seer.hpp:10,
from seerCmdLine.cpp:9:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from seer.hpp:10,
from seerBinaryAssoc.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from kmds.hpp:9,
from kmdsMain.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from kmds.hpp:9,
from kmdsStruct.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from linkFunction.hpp:6,
from seer.hpp:10,
from seerStats.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
In file included from /usr/include/armadillo:22,
from seercommon.hpp:35,
from kmds.hpp:9,
from kmdsCmdLine.cpp:8:
/usr/include/armadillo_bits/config.hpp:338:86: note: '#pragma message: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed'
338 | #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
| ^
/usr/include/armadillo_bits/config.hpp:343:75: note: '#pragma message: INFO: suggest to use ARMA_WARN_LEVEL option instead'
343 | #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
| ^
/usr/include/armadillo_bits/config.hpp:346:61: note: '#pragma message: INFO: see the documentation for details'
346 | #pragma message ("INFO: see the documentation for details")
| ^
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o mapCmdLine.o mapCmdLine.cpp
seerCommon.cpp: In function 'arma::vec dlib_to_arma(const column_vector&)':
seerCommon.cpp:174:31: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'long int' [-Wsign-compare]
174 | for (unsigned int i = 0; i < dlib_vec.nr(); ++i)
| ~~^~~~~~~~~~~~~~~
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o combineInit.o combineInit.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o combineCmdLine.o combineCmdLine.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o combineKmers.o combineKmers.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o filter_seer.o filter_seer.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -c -o filterCmdLine.o filterCmdLine.cpp
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial fasta.o significant_kmer.o mapMain.o mapCmdLine.o -lboost_program_options -lpthread -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -o map_back
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial significant_kmer.o filter_seer.o filterCmdLine.o -lboost_program_options -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -o filter_seer
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial combineInit.o combineCmdLine.o combineKmers.o -lgzstream -lz -lboost_program_options -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -o combineKmers
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial sample.o significant_kmer.o kmer.o covar.o seerCommon.o seerErr.o seerIO.o seerBasicFilter.o seerMain.o seerCmdLine.o seerStats.o seerContinuousAssoc.o seerBinaryAssoc.o logitFunction.o linearFunction.o -lhdf5 -lgzstream -lz -larmadillo -lboost_program_options -llapack -lblas -lpthread -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -o seer
g++ -g -O2 -ffile-prefix-map=/build/seer-1.1.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -O3 -std=c++11 -Wdate-time -D_FORTIFY_SOURCE=2 -D DLIB_NO_GUI_SUPPORT=1 -D DLIB_USE_BLAS=1 -D DLIB_USE_LAPACK=1 -DARMA_USE_HDF5=1 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial sample.o significant_kmer.o kmer.o covar.o seerCommon.o seerErr.o seerIO.o seerBasicFilter.o kmdsMain.o kmdsStruct.o kmdsCmdLine.o -lhdf5 -lgzstream -lz -larmadillo -lboost_program_options -llapack -lblas -lpthread -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/hdf5/serial -o kmds
make[3]: Leaving directory '/build/seer-1.1.4/src'
make[2]: Leaving directory '/build/seer-1.1.4'
make[1]: Leaving directory '/build/seer-1.1.4'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/seer-1.1.4'
if dh_auto_test ; then echo Test passed ; else echo '****************************** TEST FAILED. Please contact upstream *******************************' ; fi
make -j16 test
make[2]: Entering directory '/build/seer-1.1.4'
cd src && make all
make[3]: Entering directory '/build/seer-1.1.4/src'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/build/seer-1.1.4/src'
cd test && make test
make[3]: Entering directory '/build/seer-1.1.4/test'
./run_test.pl && touch tests_passed
PASSED test 1, basic filters
PASSED test 2, binary phenotype assocation
PASSED test 3, print output
PASSED test 4, continuous phenotype assocation
FAILED test 5, assocation with population structure
Files /tmp/WWaAo6AUEb and test5.o.txt differ
make[3]: *** [Makefile:2: all] Error 1
make[3]: Leaving directory '/build/seer-1.1.4/test'
make[2]: *** [Makefile:15: test] Error 2
make[2]: Leaving directory '/build/seer-1.1.4'
dh_auto_test: error: make -j16 test returned exit code 2
****************************** TEST FAILED. Please contact upstream *******************************
make[1]: Leaving directory '/build/seer-1.1.4'
create-stamp debian/debhelper-build-stamp
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/seer-1.1.4'
dh_auto_install -- PREFIX=/build/seer-1.1.4/debian/seer/usr
make -j16 install DESTDIR=/build/seer-1.1.4/debian/seer AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" PREFIX=/build/seer-1.1.4/debian/seer/usr
make[2]: Entering directory '/build/seer-1.1.4'
cd src && make all
make[3]: Entering directory '/build/seer-1.1.4/src'
make[3]: Nothing to be done for 'all'.
make[3]: Leaving directory '/build/seer-1.1.4/src'
cd src && make install
make[3]: Entering directory '/build/seer-1.1.4/src'
install -d /build/seer-1.1.4/debian/seer/usr/bin
install seer kmds map_back combineKmers filter_seer /build/seer-1.1.4/debian/seer/usr/bin
make[3]: Leaving directory '/build/seer-1.1.4/src'
make[2]: Leaving directory '/build/seer-1.1.4'
for pl in scripts/*.pl ; do \
plbase=`basename ${pl} .pl` ; \
sed "s+Usage: ./${plbase}.pl+Usage: ${plbase}+" ${pl} > /build/seer-1.1.4/debian/seer/usr/bin/${plbase} ; \
done
# Fix broken usage hint:
sed -i "s+Usage: ./hits_to_matrix.pl+Usage: reformat_output+" /build/seer-1.1.4/debian/seer/usr/bin/reformat_output
make[1]: Leaving directory '/build/seer-1.1.4'
dh_installdocs
dh_installchangelogs
dh_installexamples
dh_installman
dh_perl
dh_link
dh_strip_nondeterminism
dh_compress
debian/rules override_dh_fixperms
make[1]: Entering directory '/build/seer-1.1.4'
dh_fixperms
find debian -name Makefile -exec chmod -x \{\} \;
find debian -name "*.fa" -exec chmod -x \{\} \;
make[1]: Leaving directory '/build/seer-1.1.4'
dh_missing
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/seer/usr/bin/combineKmers was not linked against libz.so.1 (it uses none of the library's symbols)
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'seer-dbgsym' in '../seer-dbgsym_1.1.4-7_i386.deb'.
dpkg-deb: building package 'seer' in '../seer_1.1.4-7_i386.deb'.
dpkg-genbuildinfo --build=binary -O../seer_1.1.4-7_i386.buildinfo
dpkg-genchanges --build=binary -O../seer_1.1.4-7_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/61614 and its subdirectories
I: Current time: Wed May 15 02:56:13 -12 2024
I: pbuilder-time-stamp: 1715784973