I: pbuilder: network access will be disabled during build
I: Current time: Wed Jul 28 16:09:52 +14 2021
I: pbuilder-time-stamp: 1627438192
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [cbflib_0.9.6+dfsg1-2.dsc]
I: copying [./cbflib_0.9.6+dfsg1.orig.tar.xz]
I: copying [./cbflib_0.9.6+dfsg1-2.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.m8As9a4y/trustedkeys.kbx': General error
gpgv: Signature made Tue Apr 21 08:24:04 2020 +14
gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB
gpgv: issuer "picca@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./cbflib_0.9.6+dfsg1-2.dsc
dpkg-source: info: extracting cbflib in cbflib-0.9.6+dfsg1
dpkg-source: info: unpacking cbflib_0.9.6+dfsg1.orig.tar.xz
dpkg-source: info: unpacking cbflib_0.9.6+dfsg1-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 0001-makefile-fix-Get-system-HDF5-config-from-pkg-config.patch
dpkg-source: info: applying 0002-makefile-fix-Fix-CBFLIB_DONT_USE_LOCAL_TIFF-config-v.patch
dpkg-source: info: applying 0003-makefile-fix-Allow-disabling-PyCBF-from-env-with-NOP.patch
dpkg-source: info: applying 0004-makefile-fix-Install-libs-to-CBF_PREFIX-INSTALL_LIB.patch
dpkg-source: info: applying 0005-makefile-fix-Install-lib-to-SOVERSION-and-add-symlin.patch
dpkg-source: info: applying 0006-makefile-fix-Allow-disabling-libimg-and-libfcb-build.patch
dpkg-source: info: applying 0007-trailing-spaces.patch
dpkg-source: info: applying 0007-makefile-fix-Do-not-link-example-progs-w.-libimg.patch
dpkg-source: info: applying 0008-makefile-fix-Add-SONAME-to-linker-flags.patch
dpkg-source: info: applying 0009-makefile-fix-Pick-up-CFLAGS-and-LDFLAGS-from-the-env.patch
dpkg-source: info: applying 0010-makefile-fix-Prepend-CPPFLAGS-value-to-CFLAGS.patch
dpkg-source: info: applying 0011-makefile-fix-Add-LDFLAGS-to-SOLDFLAGS-to-pick-up-har.patch
dpkg-source: info: applying 0013-makefile-deb-Use-DESTDIR-usr-as-CBF_PREFIX.patch
dpkg-source: info: applying 0014-makefile-deb-Do-not-build-tiff2cbf.patch
dpkg-source: info: applying 0016-cross.patch
dpkg-source: info: applying 0016-add-missing-LdFLAG-to-cbf_testxfelread.patch
dpkg-source: info: applying 0017-Added-an-extra_compile_args-to-setup.py.patch
dpkg-source: info: applying 0018-fix-the-FTBFS-with-missing-m4-Makefile.m4.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/D01_modify_environment starting
debug: Running on virt32c.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
Removing 'diversion of /bin/sh to /bin/sh.distrib by dash'
Adding 'diversion of /bin/sh to /bin/sh.distrib by bash'
Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash'
Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash'
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/D02_print_environment starting
I: set
BASH=/bin/sh
BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath
BASH_ALIASES=()
BASH_ARGC=()
BASH_ARGV=()
BASH_CMDS=()
BASH_LINENO=([0]="12" [1]="0")
BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf")
BASH_VERSION='5.1.4(1)-release'
BUILDDIR=/build
BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
BUILDUSERNAME=pbuilder2
BUILD_ARCH=armhf
DEBIAN_FRONTEND=noninteractive
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=4'
DIRSTACK=()
DISTRIBUTION=
EUID=0
FUNCNAME=([0]="Echo" [1]="main")
GROUPS=()
HOME=/root
HOSTNAME=i-capture-the-hostname
HOSTTYPE=arm
HOST_ARCH=armhf
IFS='
'
INVOCATION_ID=94768f7715594429a28e5721154843a5
LANG=C
LANGUAGE=it_CH:it
LC_ALL=C
MACHTYPE=arm-unknown-linux-gnueabihf
MAIL=/var/mail/root
OPTERR=1
OPTIND=1
OSTYPE=linux-gnueabihf
PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
PBCURRENTCOMMANDLINEOPERATION=build
PBUILDER_OPERATION=build
PBUILDER_PKGDATADIR=/usr/share/pbuilder
PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
PBUILDER_SYSCONFDIR=/etc
PIPESTATUS=([0]="0")
POSIXLY_CORRECT=y
PPID=25053
PS4='+ '
PWD=/
SHELL=/bin/bash
SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
SHLVL=3
SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.76oUyKbhMw/pbuilderrc_LvAC --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.76oUyKbhMw/b2 --logfile b2/build.log --extrapackages usrmerge cbflib_0.9.6+dfsg1-2.dsc'
SUDO_GID=113
SUDO_UID=107
SUDO_USER=jenkins
TERM=unknown
TZ=/usr/share/zoneinfo/Etc/GMT-14
UID=0
USER=root
_='I: set'
http_proxy=http://10.0.0.15:8000/
I: uname -a
Linux i-capture-the-hostname 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-2 (2021-07-20) armv7l GNU/Linux
I: ls -l /bin
total 3580
-rwxr-xr-x 1 root root 816764 Jun 22 16:26 bash
-rwxr-xr-x 3 root root 26052 Jul 21 2020 bunzip2
-rwxr-xr-x 3 root root 26052 Jul 21 2020 bzcat
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep
-rwxr-xr-x 3 root root 26052 Jul 21 2020 bzip2
-rwxr-xr-x 1 root root 9636 Jul 21 2020 bzip2recover
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore
-rwxr-xr-x 1 root root 26668 Sep 23 2020 cat
-rwxr-xr-x 1 root root 43104 Sep 23 2020 chgrp
-rwxr-xr-x 1 root root 38984 Sep 23 2020 chmod
-rwxr-xr-x 1 root root 43112 Sep 23 2020 chown
-rwxr-xr-x 1 root root 92616 Sep 23 2020 cp
-rwxr-xr-x 1 root root 75524 Dec 11 2020 dash
-rwxr-xr-x 1 root root 75880 Sep 23 2020 date
-rwxr-xr-x 1 root root 55436 Sep 23 2020 dd
-rwxr-xr-x 1 root root 59912 Sep 23 2020 df
-rwxr-xr-x 1 root root 96764 Sep 23 2020 dir
-rwxr-xr-x 1 root root 55012 Feb 8 04:38 dmesg
lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname
-rwxr-xr-x 1 root root 22508 Sep 23 2020 echo
-rwxr-xr-x 1 root root 28 Nov 10 2020 egrep
-rwxr-xr-x 1 root root 22496 Sep 23 2020 false
-rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep
-rwxr-xr-x 1 root root 47492 Feb 8 04:38 findmnt
-rwsr-xr-x 1 root root 26076 Feb 27 06:12 fusermount
-rwxr-xr-x 1 root root 124508 Nov 10 2020 grep
-rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip
-rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe
-rwxr-xr-x 1 root root 64212 Mar 3 13:30 gzip
-rwxr-xr-x 1 root root 13784 Nov 8 2019 hostname
-rwxr-xr-x 1 root root 43180 Sep 23 2020 ln
-rwxr-xr-x 1 root root 35068 Feb 8 2020 login
-rwxr-xr-x 1 root root 96764 Sep 23 2020 ls
-rwxr-xr-x 1 root root 99940 Feb 8 04:38 lsblk
-rwxr-xr-x 1 root root 51408 Sep 23 2020 mkdir
-rwxr-xr-x 1 root root 43184 Sep 23 2020 mknod
-rwxr-xr-x 1 root root 30780 Sep 23 2020 mktemp
-rwxr-xr-x 1 root root 34408 Feb 8 04:38 more
-rwsr-xr-x 1 root root 34400 Feb 8 04:38 mount
-rwxr-xr-x 1 root root 9824 Feb 8 04:38 mountpoint
-rwxr-xr-x 1 root root 88524 Sep 23 2020 mv
lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 26652 Sep 23 2020 pwd
lrwxrwxrwx 1 root root 4 Jun 22 16:26 rbash -> bash
-rwxr-xr-x 1 root root 30740 Sep 23 2020 readlink
-rwxr-xr-x 1 root root 43104 Sep 23 2020 rm
-rwxr-xr-x 1 root root 30732 Sep 23 2020 rmdir
-rwxr-xr-x 1 root root 14144 Sep 28 2020 run-parts
-rwxr-xr-x 1 root root 76012 Dec 23 2018 sed
lrwxrwxrwx 1 root root 4 Jul 28 16:10 sh -> bash
lrwxrwxrwx 1 root root 4 Jul 26 23:25 sh.distrib -> dash
-rwxr-xr-x 1 root root 22532 Sep 23 2020 sleep
-rwxr-xr-x 1 root root 55360 Sep 23 2020 stty
-rwsr-xr-x 1 root root 46704 Feb 8 04:38 su
-rwxr-xr-x 1 root root 22532 Sep 23 2020 sync
-rwxr-xr-x 1 root root 340872 Feb 17 23:55 tar
-rwxr-xr-x 1 root root 9808 Sep 28 2020 tempfile
-rwxr-xr-x 1 root root 67696 Sep 23 2020 touch
-rwxr-xr-x 1 root root 22496 Sep 23 2020 true
-rwxr-xr-x 1 root root 9636 Feb 27 06:12 ulockmgr_server
-rwsr-xr-x 1 root root 22108 Feb 8 04:38 umount
-rwxr-xr-x 1 root root 22520 Sep 23 2020 uname
-rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress
-rwxr-xr-x 1 root root 96764 Sep 23 2020 vdir
-rwxr-xr-x 1 root root 38512 Feb 8 04:38 wdctl
lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat
-rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp
-rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff
-rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep
-rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep
-rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce
-rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep
-rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless
-rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore
-rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 12), dh-python, libhdf5-dev, pkg-config, python3-all-dbg, python3-all-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19398 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on dh-python; however:
Package dh-python is not installed.
pbuilder-satisfydepends-dummy depends on libhdf5-dev; however:
Package libhdf5-dev is not installed.
pbuilder-satisfydepends-dummy depends on pkg-config; however:
Package pkg-config is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dbg; however:
Package python3-all-dbg is not installed.
pbuilder-satisfydepends-dummy depends on python3-all-dev; however:
Package python3-all-dev is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libglib2.0-0{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-all-dbg{a} libpython3-all-dev{a} libpython3-dbg{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dbg{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} po-debconf{a} python3{a} python3-all{a} python3-all-dbg{a} python3-all-dev{a} python3-dbg{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-dbg{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
ca-certificates curl gdb gdb-minimal javascript-common libarchive-cpio-perl libglib2.0-data libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs
0 packages upgraded, 82 newly installed, 0 to remove and 0 not upgraded.
Need to get 68.6 MB of archives. After unpacking 210 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB]
Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB]
Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB]
Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB]
Get: 6 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB]
Get: 7 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB]
Get: 8 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB]
Get: 9 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB]
Get: 10 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB]
Get: 11 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB]
Get: 12 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB]
Get: 13 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB]
Get: 14 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB]
Get: 15 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB]
Get: 16 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB]
Get: 17 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB]
Get: 18 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB]
Get: 19 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get: 20 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get: 21 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB]
Get: 22 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB]
Get: 23 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB]
Get: 24 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB]
Get: 25 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB]
Get: 26 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get: 27 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB]
Get: 28 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB]
Get: 29 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB]
Get: 30 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB]
Get: 31 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 32 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 33 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get: 34 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get: 35 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get: 36 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB]
Get: 37 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB]
Get: 38 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB]
Get: 39 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB]
Get: 40 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB]
Get: 41 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 42 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 43 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB]
Get: 44 http://deb.debian.org/debian bullseye/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB]
Get: 45 http://deb.debian.org/debian bullseye/main armhf python3-distutils all 3.9.2-1 [143 kB]
Get: 46 http://deb.debian.org/debian bullseye/main armhf dh-python all 4.20201102+nmu1 [99.4 kB]
Get: 47 http://deb.debian.org/debian bullseye/main armhf hdf5-helpers armhf 1.10.6+repack-4 [40.4 kB]
Get: 48 http://deb.debian.org/debian bullseye/main armhf libaec0 armhf 1.0.4-1 [20.4 kB]
Get: 49 http://deb.debian.org/debian bullseye/main armhf libsz2 armhf 1.0.4-1 [6616 B]
Get: 50 http://deb.debian.org/debian bullseye/main armhf libaec-dev armhf 1.0.4-1 [18.3 kB]
Get: 51 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2 [123 kB]
Get: 52 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB]
Get: 53 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB]
Get: 54 http://deb.debian.org/debian bullseye/main armhf libhdf5-103-1 armhf 1.10.6+repack-4 [1178 kB]
Get: 55 http://deb.debian.org/debian bullseye/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-4 [133 kB]
Get: 56 http://deb.debian.org/debian bullseye/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-4 [94.0 kB]
Get: 57 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-100 armhf 1.10.6+repack-4 [80.5 kB]
Get: 58 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-4 [51.2 kB]
Get: 59 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-4 [37.4 kB]
Get: 60 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB]
Get: 61 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB]
Get: 62 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [242 kB]
Get: 63 http://deb.debian.org/debian bullseye/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB]
Get: 64 http://deb.debian.org/debian bullseye/main armhf libhdf5-dev armhf 1.10.6+repack-4 [2444 kB]
Get: 65 http://deb.debian.org/debian bullseye/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB]
Get: 66 http://deb.debian.org/debian bullseye/main armhf libjs-underscore all 1.9.1~dfsg-3 [100 kB]
Get: 67 http://deb.debian.org/debian bullseye/main armhf libjs-sphinxdoc all 3.4.3-2 [127 kB]
Get: 68 http://deb.debian.org/debian bullseye/main armhf libpython3.9-dbg armhf 3.9.2-1 [14.3 MB]
Get: 69 http://deb.debian.org/debian bullseye/main armhf libpython3-dbg armhf 3.9.2-3 [21.6 kB]
Get: 70 http://deb.debian.org/debian bullseye/main armhf libpython3-all-dbg armhf 3.9.2-3 [1064 B]
Get: 71 http://deb.debian.org/debian bullseye/main armhf libpython3.9 armhf 3.9.2-1 [1447 kB]
Get: 72 http://deb.debian.org/debian bullseye/main armhf libpython3.9-dev armhf 3.9.2-1 [3160 kB]
Get: 73 http://deb.debian.org/debian bullseye/main armhf libpython3-dev armhf 3.9.2-3 [21.7 kB]
Get: 74 http://deb.debian.org/debian bullseye/main armhf libpython3-all-dev armhf 3.9.2-3 [1068 B]
Get: 75 http://deb.debian.org/debian bullseye/main armhf pkg-config armhf 0.29.2-1 [62.4 kB]
Get: 76 http://deb.debian.org/debian bullseye/main armhf python3-all armhf 3.9.2-3 [1056 B]
Get: 77 http://deb.debian.org/debian bullseye/main armhf python3.9-dbg armhf 3.9.2-1 [19.3 MB]
Get: 78 http://deb.debian.org/debian bullseye/main armhf python3-dbg armhf 3.9.2-3 [1224 B]
Get: 79 http://deb.debian.org/debian bullseye/main armhf python3-all-dbg armhf 3.9.2-3 [1064 B]
Get: 80 http://deb.debian.org/debian bullseye/main armhf python3.9-dev armhf 3.9.2-1 [515 kB]
Get: 81 http://deb.debian.org/debian bullseye/main armhf python3-dev armhf 3.9.2-3 [24.8 kB]
Get: 82 http://deb.debian.org/debian bullseye/main armhf python3-all-dev armhf 3.9.2-3 [1064 B]
Fetched 68.6 MB in 5s (12.7 MB/s)
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode
Setting up python3.9-dev (3.9.2-1) ...
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-> Finished parsing the build-deps
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The following additional packages will be installed:
libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl
The following NEW packages will be installed:
libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge
0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded.
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Get:3 http://deb.debian.org/debian bullseye/main armhf libfile-find-rule-perl all 0.34-1 [30.6 kB]
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I: Building the package
hostname: Name or service not known
I: Running cd /build/cbflib-0.9.6+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cbflib_0.9.6+dfsg1-2_source.changes
dpkg-buildpackage: info: source package cbflib
dpkg-buildpackage: info: source version 0.9.6+dfsg1-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel <picca@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --with python3 --no-parallel
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_clean
make -j1 distclean
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
./.undosymlinks
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
/usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.6+dfsg1/pycbf/setup.py
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
(m4 -P -Dregexlib= -Dregexlib2= \
-Dregexlibdir=/build/cbflib-0.9.6+dfsg1/lib -Dhdf5_prefix=/build/cbflib-0.9.6+dfsg1 -Dextra_compile_args=-I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/m4/setup_py.m4 > /build/cbflib-0.9.6+dfsg1/pycbf/setup.py)
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_clean --buildsystem=pybuild --sourcedirectory=pycbf
I: pybuild base:232: python3.9 setup.py clean
running clean
removing '/build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
I: pybuild base:232: python3.9-dbg setup.py clean
running clean
removing '/build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build' (and everything under it)
'build/bdist.linux-armhf' does not exist -- can't clean it
'build/scripts-3.9' does not exist -- can't clean it
rm -f pycbf/setup.py
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_autoreconf_clean -O--no-parallel
dh_clean -O--no-parallel
debian/rules binary
dh binary --with python3 --no-parallel
dh_update_autotools_config -O--no-parallel
dh_autoreconf -O--no-parallel
debian/rules override_dh_auto_configure
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_configure
/usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.6+dfsg1/pycbf/setup.py
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
(m4 -P -Dregexlib= -Dregexlib2= \
-Dregexlibdir=/build/cbflib-0.9.6+dfsg1/lib -Dhdf5_prefix=/build/cbflib-0.9.6+dfsg1 -Dextra_compile_args=-I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/m4/setup_py.m4 > /build/cbflib-0.9.6+dfsg1/pycbf/setup.py)
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_configure --buildsystem=pybuild --sourcedirectory=pycbf
I: pybuild base:232: python3.9 setup.py config
running config
I: pybuild base:232: python3.9-dbg setup.py config
running config
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
# build the C/C++ library
dh_auto_build -- 'C++:=$(CXX)' all
make -j1 "INSTALL=install --strip-program=true" C\+\+:=\$\(CXX\) all
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_exit_binary.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_exit_binary.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_next_binary.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_next_binary.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_open_cifin.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_open_cifin.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_packed.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_packed.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_bits.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_read_bits.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_image.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_read_image.f90
(cd /build/cbflib-0.9.6+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_xds_i2.m4) > /build/cbflib-0.9.6+dfsg1/src/fcb_read_xds_i2.f90
chmod a+x .symlinks
chmod a+x .undosymlinks
chmod a+x doc/.symlinks
chmod a+x doc/.undosymlinks
./.symlinks --use_ln
touch symlinksdone
rm -f /build/cbflib-0.9.6+dfsg1/lib/libcbf.a
rm -f *.o
mkdir -p /build/cbflib-0.9.6+dfsg1/lib
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX \
-DCBF_FILTER_STATIC -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial -c /build/cbflib-0.9.6+dfsg1/src/cbf.c /build/cbflib-0.9.6+dfsg1/src/cbf_airy_disk.c /build/cbflib-0.9.6+dfsg1/src/cbf_alloc.c /build/cbflib-0.9.6+dfsg1/src/cbf_ascii.c /build/cbflib-0.9.6+dfsg1/src/cbf_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_byte_offset.c /build/cbflib-0.9.6+dfsg1/src/cbf_canonical.c /build/cbflib-0.9.6+dfsg1/src/cbf_codes.c /build/cbflib-0.9.6+dfsg1/src/cbf_compress.c /build/cbflib-0.9.6+dfsg1/src/cbf_context.c /build/cbflib-0.9.6+dfsg1/src/cbf_copy.c /build/cbflib-0.9.6+dfsg1/src/cbf_file.c /build/cbflib-0.9.6+dfsg1/src/cbf_getopt.c /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c /build/cbflib-0.9.6+dfsg1/src/cbf_lex.c /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c /build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c /build/cbflib-0.9.6+dfsg1/src/cbf_packed.c /build/cbflib-0.9.6+dfsg1/src/cbf_predictor.c /build/cbflib-0.9.6+dfsg1/src/cbf_read_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_read_mime.c /build/cbflib-0.9.6+dfsg1/src/cbf_simple.c /build/cbflib-0.9.6+dfsg1/src/cbf_string.c /build/cbflib-0.9.6+dfsg1/src/cbf_stx.c /build/cbflib-0.9.6+dfsg1/src/cbf_tree.c /build/cbflib-0.9.6+dfsg1/src/cbf_uncompressed.c /build/cbflib-0.9.6+dfsg1/src/cbf_write.c /build/cbflib-0.9.6+dfsg1/src/cbf_write_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_ws.c /build/cbflib-0.9.6+dfsg1/src/cbff.c /build/cbflib-0.9.6+dfsg1/src/md5c.c /build/cbflib-0.9.6+dfsg1/src/img.c /build/cbflib-0.9.6+dfsg1/src/fgetln.c
/build/cbflib-0.9.6+dfsg1/src/cbf.c: In function 'cbf_convert_dictionary_definition':
/build/cbflib-0.9.6+dfsg1/src/cbf.c:5474:22: warning: 'itemname' may be used uninitialized in this function [-Wmaybe-uninitialized]
5474 | cbf_failnez( cbf_set_hashedvalue (cbfdictionary, itemname, "name", -1))
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf.c:266:
In function 'strncpy',
inlined from 'cbf_validate' at /build/cbflib-0.9.6+dfsg1/src/cbf.c:7605:6:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
inlined from 'cbf_validate' at /build/cbflib-0.9.6+dfsg1/src/cbf.c:7686:25:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:262:
In function 'strncpy',
inlined from 'cbf_copy_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:937:21:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function 'cbf_copy_string':
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here
909 | n = strlen(string);
| ^~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:262:
In function 'strncpy',
inlined from 'cbf_copy_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:922:21:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function 'cbf_copy_string':
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here
909 | n = strlen(string);
| ^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_configParse_extractVector':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4367:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4367 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4375:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4375 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4383:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4383 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_config_parse':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4481:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4481 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for minicbf axis '%s'\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: note: in definition of macro 'REQUIRE_TOKEN'
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4494:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4494 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for Nexus axis '%s'\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: note: in definition of macro 'REQUIRE_TOKEN'
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4519:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4519 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__cbfcat_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20819:38: warning: implicit declaration of function 'cbf_read_h5file_group'; did you mean 'cbf_read_h5file'? [-Wimplicit-function-declaration]
20819 | error |= cbf_read_h5file_group(cbf,nx,nx->flags,(hid_t)object);
| ^~~~~~~~~~~~~~~~~~~~~
| cbf_read_h5file
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20811:48: warning: unused variable 'indent' [-Wunused-variable]
20811 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20784:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
20784 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__cbfdb_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20933:48: warning: unused variable 'indent' [-Wunused-variable]
20933 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20906:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
20906 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__entry_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21797:48: warning: unused variable 'indent' [-Wunused-variable]
21797 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21716:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
21716 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22516:36: warning: variable 'node' set but not used [-Wunused-but-set-variable]
22516 | cbf_node * node = NULL;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL;
| ^~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL;
| ^~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL;
| ^~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22110:30: warning: variable 'data_row' set but not used [-Wunused-but-set-variable]
22110 | unsigned int data_row = ~0x0;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22836:32: warning: variable 'diffrn_scan_axis' set but not used [-Wunused-but-set-variable]
22836 | cbf_node * diffrn_scan_axis = NULL;
| ^~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__array_structure_list_axis':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26493:50: warning: unused variable 'rotation_axis_path' [-Wunused-variable]
26493 | const char * rotation_axis_path = NULL;
| ^~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__cbf_general_axes':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26704:26: warning: unused variable 'equipment_component' [-Wunused-variable]
26704 | const char * equipment_component = NULL;
| ^~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__axis':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:27034:28: warning: variable 'axis_rotation_axis' set but not used [-Wunused-but-set-variable]
27034 | cbf_node * axis_rotation_axis = NULL;
| ^~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_h5ds_store_as_column':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:40: warning: unused variable 'close' [-Wunused-variable]
29166 | char open, close;
| ^~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:34: warning: unused variable 'open' [-Wunused-variable]
29166 | char open, close;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28931:21: warning: variable 'type_order' set but not used [-Wunused-but-set-variable]
28931 | H5T_order_t type_order;
| ^~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28925:16: warning: unused variable 'byte_order' [-Wunused-variable]
28925 | char * byte_order;
| ^~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28903:14: warning: unused variable 'buffer' [-Wunused-variable]
28903 | char buffer[25];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_object_visit':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:42: warning: variable 'checked_digest' set but not used [-Wunused-but-set-variable]
30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0;
| ^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:36: warning: variable 'type' set but not used [-Wunused-but-set-variable]
30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30708:32: warning: variable 'atcbf' set but not used [-Wunused-but-set-variable]
30708 | int save_incbf, incbf, atcbf; /* within or at NXpdb or CBF_cif, etc. */
| ^~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30707:36: warning: unused variable 'atnexus' [-Wunused-variable]
30707 | int save_innexus, innexus, atnexus; /* within or at NXentry */
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_read_h5file_group':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31937:13: warning: unused variable 'errorcode' [-Wunused-variable]
31937 | int errorcode = 0;
| ^~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31933:19: warning: unused variable 'node' [-Wunused-variable]
31933 | cbf_node *node;
| ^~~~
At top level:
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20853:16: warning: 'cbf_write_nx2cbf__cbfdb_op' defined but not used [-Wunused-function]
20853 | static int cbf_write_nx2cbf__cbfdb_op
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20641:16: warning: 'cbf_write_nx2cbf__cbfcat_op' defined but not used [-Wunused-function]
20641 | static int cbf_write_nx2cbf__cbfcat_op
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:9133:16: warning: 'cbf_require_nxdetectors' defined but not used [-Wunused-function]
9133 | static int cbf_require_nxdetectors(const cbf_handle handle,
| ^~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_get_nxdata_field_name2.isra':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:37: warning: '%06d' directive writing between 6 and 10 bytes into a region of size 7 [-Wformat-overflow=]
6345 | sprintf(buffer,"%06d",block);
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:36: note: directive argument in the range [1, 2147483647]
6345 | sprintf(buffer,"%06d",block);
| ^~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/hdf5/serial/H5Epublic.h:20,
from /usr/include/hdf5/serial/hdf5.h:26,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:258:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 11 bytes into a destination of size 7
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265,
from /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:260:
In function 'strncat',
inlined from 'cbf_create_h5handle2' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17932:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17934:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2u' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18014:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2u' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18016:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23197:42: warning: 'offset[2]' may be used uninitialized in this function [-Wmaybe-uninitialized]
23197 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[2]));
| ^~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23195:42: warning: 'offset[1]' may be used uninitialized in this function [-Wmaybe-uninitialized]
23195 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[1]));
| ^~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:23193:42: warning: 'offset' may be used uninitialized in this function [-Wmaybe-uninitialized]
23193 | CBF_CALL(cbf_set_doublevalue(cbf,"%.15g",offset[0]));
| ^~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c: In function 'cbf_h5z_filter':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:751:71: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
751 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit real IEEE\"\n",
| ~~^
| |
| long int
| %d
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:755:75: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
755 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit integer\"\n",
| ~~^
| |
| long int
| %d
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:758:77: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
758 | sprintf (text, "X-Binary-Element-Type: \"unsigned %ld-bit integer\"\n",
| ~~^
| |
| long int
| %d
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264,
from /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259:
In function 'strncpy',
inlined from 'cbf_append_string.part.0' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_append_string.part.0':
/build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here
302 | srclen = strlen(src);
| ^~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264,
from /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259:
In function 'strncpy',
inlined from 'cbf_append_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9,
inlined from 'cbf_append_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:293:16,
inlined from 'cbf_set_minicbf_header' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:429:13:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_decompress_nibble_offset':
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:1396:45: warning: right shift count >= width of type [-Wshift-count-overflow]
1396 | if ((((long)delta[0]>>32)&0xFFFFFFFFL)==0x80000000L&&(((long)delta[0]&0xFFFFFFFFl)==0L)) {
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:1400:49: warning: right shift count >= width of type [-Wshift-count-overflow]
1400 | if ((((long)delta[0]>>32)&0x80000000L) == 0x80000000L) {
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_compress_nibble_offset':
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:936:21: warning: 'dmode[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
936 | curmode = dmode[inrun];
| ~~~~~~~~^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c: In function 'cbf_set_reference_beam_center':
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:44: warning: variable 'ncenter2' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:34: warning: variable 'ncenter1' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c: In function 'cbf_lex_wrapper':
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c:370:13: warning: variable 'cbffile' set but not used [-Wunused-but-set-variable]
370 | cbf_file *cbffile;
| ^~~~~~~
At top level:
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c:827:26: warning: 'yytname' defined but not used [-Wunused-const-variable=]
827 | static const char *const yytname[] =
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/src/img.c: In function 'img_read_mar345header':
/build/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of 'char[65]' [-Warray-bounds]
1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0';
| ~~~^~
/build/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing 'C64'
1230 | char C64[65], D64[65], *C, *D, *E;
| ^~~
/usr/bin/ar cr /build/cbflib-0.9.6+dfsg1/lib/libcbf.a *.o
/usr/bin/ranlib /build/cbflib-0.9.6+dfsg1/lib/libcbf.a
rm -f *.o
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/adscimg2cbf
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:1:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c: In function 'main':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:245:27: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
245 | strstrhit = cbf_cistrnstr(argv[iarg], flags[j], strlen(flags[j]));
| ^
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:176:10: warning: unused variable 'thickness' [-Wunused-variable]
176 | double thickness=0.;
| ^~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:162:7: warning: variable 'cbf_status' set but not used [-Wunused-but-set-variable]
162 | int cbf_status;
| ^~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:13:
In function 'strncpy',
inlined from 'gethd.constprop' at /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:31:3:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c: In function 'gethd.constprop':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf.c:28:7: note: length computed here
28 | l = strlen (field);
| ^~~~~~~~~~~~~~
In file included from /usr/include/hdf5/serial/H5public.h:35,
from /usr/include/hdf5/serial/hdf5.h:22,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:177:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function 'adscimg2cbf_sub2':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:793:20: warning: passing argument 1 of 'convertroi' discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
793 | if (convertroi(roi, smv_size1, smv_size2,
| ^~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:433:22: note: expected 'char *' but argument is of type 'const char *'
433 | int convertroi(char *roi, int fastdim, int slowdim,
| ~~~~~~^~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1727:27: warning: passing argument 1 of 'cbf_free_text' from incompatible pointer type [-Wincompatible-pointer-types]
1727 | cbf_free_text(&log,NULL);
| ^~~~
| |
| char **
In file included from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:262,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:179:
/build/cbflib-0.9.6+dfsg1/include/cbf_alloc.h:274:33: note: expected 'const char **' but argument is of type 'char **'
274 | int cbf_free_text (const char **old_block, size_t *old_nelem);
| ~~~~~~~~~~~~~^~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1868:30: warning: variable 'valmax' set but not used [-Wunused-but-set-variable]
1868 | double valnew,valmin,valmax;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1868:16: warning: variable 'valnew' set but not used [-Wunused-but-set-variable]
1868 | double valnew,valmin,valmax;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:530:27: warning: unused variable 'kjcm' [-Wunused-variable]
530 | int ki, kj, kicm, kjcm;
| ^~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:530:21: warning: unused variable 'kicm' [-Wunused-variable]
530 | int ki, kj, kicm, kjcm;
| ^~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:522:28: warning: variable 'smv_bin_type' set but not used [-Wunused-but-set-variable]
522 | int smv_bin, smv_adc, smv_bin_type;
| ^~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function 'adscimg2cbf_sub':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:2075:34: warning: passing argument 4 of 'adscimg2cbf_sub2' makes integer from pointer without a cast [-Wint-conversion]
2075 | NULL,NULL,NULL,NULL,
| ^~~~
| |
| void *
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:481:29: note: expected 'size_t' {aka 'unsigned int'} but argument is of type 'void *'
481 | size_t old_int_data_size,
| ~~~~~~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:179:
In function 'strncpy',
inlined from 'gethd.constprop' at /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:263:3:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function 'gethd.constprop':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:260:7: note: length computed here
260 | l = strlen (field);
| ^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c: In function 'adscimg2cbf_sub2':
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:588:29: warning: ';
' directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
588 | sprintf(temp, "%s=%s;\n", s, s1);
| ^~~
In file included from /usr/include/stdio.h:867,
from /usr/include/hdf5/serial/H5Epublic.h:20,
from /usr/include/hdf5/serial/hdf5.h:26,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:177:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output 4 or more bytes (assuming 1027) into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/adscimg2cbf_sub.c:1846:53: warning: 'smooth_data_as_int' may be used uninitialized in this function [-Wmaybe-uninitialized]
1846 | if (ki > 0 && smooth_data_as_int[(ki-1)*(1+fasthigh-fastlow+fastpadlow+fastpadhigh)/(bin+1)+kj] > 0) {
| ^
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/arvai_test.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/arvai_test
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c /build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cbf2adscimg
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:1:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:3:
In function 'strncpy',
inlined from 'gethd' at /build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:21:3:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c: In function 'gethd':
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg.c:18:7: note: length computed here
18 | l = strlen (field);
| ^~~~~~~~~~~~~~
In file included from /usr/include/hdf5/serial/H5public.h:35,
from /usr/include/hdf5/serial/hdf5.h:22,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:126:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c: In function 'padhd':
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:217:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
217 | for ( hp=header; *hp != '}'; hp++); hp++;
| ^~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:217:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
217 | for ( hp=header; *hp != '}'; hp++); hp++;
| ^~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c: In function 'cbfhandle2img_sub':
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:57: warning: variable 'dirinc' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:46: warning: variable 'dirend' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:35: warning: variable 'dirsta' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:28: warning: variable 'second' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:21: warning: variable 'first' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf2adscimg_sub.c:247:13: warning: variable 'colrow' set but not used [-Wunused-but-set-variable]
247 | int i, k, colrow, first, second,dirsta[2], dirend[2], dirinc[2];
| ^~~~~~
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cbf2nexus.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cbf2nexus
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cif2c.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cif2c
bash: line 1: g: command not found
make[2]: [Makefile:1771: /build/cbflib-0.9.6+dfsg1/bin/cif2c] Error 127 (ignored)
rm -f /build/cbflib-0.9.6+dfsg1/solib/libcbf.so
rm -f *.o
mkdir -p /build/cbflib-0.9.6+dfsg1/solib
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX -fPIC -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial -c /build/cbflib-0.9.6+dfsg1/src/cbf.c /build/cbflib-0.9.6+dfsg1/src/cbf_airy_disk.c /build/cbflib-0.9.6+dfsg1/src/cbf_alloc.c /build/cbflib-0.9.6+dfsg1/src/cbf_ascii.c /build/cbflib-0.9.6+dfsg1/src/cbf_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_byte_offset.c /build/cbflib-0.9.6+dfsg1/src/cbf_canonical.c /build/cbflib-0.9.6+dfsg1/src/cbf_codes.c /build/cbflib-0.9.6+dfsg1/src/cbf_compress.c /build/cbflib-0.9.6+dfsg1/src/cbf_context.c /build/cbflib-0.9.6+dfsg1/src/cbf_copy.c /build/cbflib-0.9.6+dfsg1/src/cbf_file.c /build/cbflib-0.9.6+dfsg1/src/cbf_getopt.c /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c /build/cbflib-0.9.6+dfsg1/src/cbf_lex.c /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c /build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c /build/cbflib-0.9.6+dfsg1/src/cbf_packed.c /build/cbflib-0.9.6+dfsg1/src/cbf_predictor.c /build/cbflib-0.9.6+dfsg1/src/cbf_read_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_read_mime.c /build/cbflib-0.9.6+dfsg1/src/cbf_simple.c /build/cbflib-0.9.6+dfsg1/src/cbf_string.c /build/cbflib-0.9.6+dfsg1/src/cbf_stx.c /build/cbflib-0.9.6+dfsg1/src/cbf_tree.c /build/cbflib-0.9.6+dfsg1/src/cbf_uncompressed.c /build/cbflib-0.9.6+dfsg1/src/cbf_write.c /build/cbflib-0.9.6+dfsg1/src/cbf_write_binary.c /build/cbflib-0.9.6+dfsg1/src/cbf_ws.c /build/cbflib-0.9.6+dfsg1/src/cbff.c /build/cbflib-0.9.6+dfsg1/src/md5c.c /build/cbflib-0.9.6+dfsg1/src/img.c /build/cbflib-0.9.6+dfsg1/src/fgetln.c
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf.c:266:
In function 'strncpy',
inlined from 'cbf_validate' at /build/cbflib-0.9.6+dfsg1/src/cbf.c:7605:6:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncpy',
inlined from 'cbf_validate' at /build/cbflib-0.9.6+dfsg1/src/cbf.c:7686:25:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output may be truncated copying 80 bytes from a string of length 81 [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:262:
In function 'strncpy',
inlined from 'cbf_copy_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:937:21:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function 'cbf_copy_string':
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here
909 | n = strlen(string);
| ^~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:262:
In function 'strncpy',
inlined from 'cbf_copy_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_context.c:922:21:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c: In function 'cbf_copy_string':
/build/cbflib-0.9.6+dfsg1/src/cbf_context.c:909:13: note: length computed here
909 | n = strlen(string);
| ^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_configParse_extractVector':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4367:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4367 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4375:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4375 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4383:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4383 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf);
| ~~^ ~~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4353:49: note: format string is defined here
4353 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_config_parse':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4481:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4481 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for minicbf axis '%s'\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: note: in definition of macro 'REQUIRE_TOKEN'
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4494:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4494 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for Nexus axis '%s'\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4432:17: note: in definition of macro 'REQUIRE_TOKEN'
4432 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4519:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4519 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn);
| ~~^ ~~
| | |
| long unsigned int size_t {aka unsigned int}
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_NOT_EOL'
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here
4448 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS'
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here
4456 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~
| |
| size_t {aka unsigned int}
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_EOL'
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:4440:49: note: format string is defined here
4440 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \
| ~~^
| |
| long unsigned int
| %u
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__cbfcat_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20819:38: warning: implicit declaration of function 'cbf_read_h5file_group'; did you mean 'cbf_read_h5file'? [-Wimplicit-function-declaration]
20819 | error |= cbf_read_h5file_group(cbf,nx,nx->flags,(hid_t)object);
| ^~~~~~~~~~~~~~~~~~~~~
| cbf_read_h5file
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20811:48: warning: unused variable 'indent' [-Wunused-variable]
20811 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20784:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
20784 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__cbfdb_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20933:48: warning: unused variable 'indent' [-Wunused-variable]
20933 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20906:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
20906 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__entry_op':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21797:48: warning: unused variable 'indent' [-Wunused-variable]
21797 | const unsigned int indent = table->indent;
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:21716:31: warning: unused variable 'nxpdb_found' [-Wunused-variable]
21716 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class);
| ^~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22516:36: warning: variable 'node' set but not used [-Wunused-but-set-variable]
22516 | cbf_node * node = NULL;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22769:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22769 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL;
| ^~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22770:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22770 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL;
| ^~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL;
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22771:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
22771 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL;
| ^~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22110:30: warning: variable 'data_row' set but not used [-Wunused-but-set-variable]
22110 | unsigned int data_row = ~0x0;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:22836:32: warning: variable 'diffrn_scan_axis' set but not used [-Wunused-but-set-variable]
22836 | cbf_node * diffrn_scan_axis = NULL;
| ^~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__array_structure_list_axis':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26493:50: warning: unused variable 'rotation_axis_path' [-Wunused-variable]
26493 | const char * rotation_axis_path = NULL;
| ^~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__cbf_general_axes':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:26704:26: warning: unused variable 'equipment_component' [-Wunused-variable]
26704 | const char * equipment_component = NULL;
| ^~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_cbf2nx__axis':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:27034:28: warning: variable 'axis_rotation_axis' set but not used [-Wunused-but-set-variable]
27034 | cbf_node * axis_rotation_axis = NULL;
| ^~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_h5ds_store_as_column':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:40: warning: unused variable 'close' [-Wunused-variable]
29166 | char open, close;
| ^~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:29166:34: warning: unused variable 'open' [-Wunused-variable]
29166 | char open, close;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28931:21: warning: variable 'type_order' set but not used [-Wunused-but-set-variable]
28931 | H5T_order_t type_order;
| ^~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28925:16: warning: unused variable 'byte_order' [-Wunused-variable]
28925 | char * byte_order;
| ^~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:28903:14: warning: unused variable 'buffer' [-Wunused-variable]
28903 | char buffer[25];
| ^~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_object_visit':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:42: warning: variable 'checked_digest' set but not used [-Wunused-but-set-variable]
30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0;
| ^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30752:36: warning: variable 'type' set but not used [-Wunused-but-set-variable]
30752 | int binary_id, bits, sign, type, checked_digest, realarray = 0;
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30708:32: warning: variable 'atcbf' set but not used [-Wunused-but-set-variable]
30708 | int save_incbf, incbf, atcbf; /* within or at NXpdb or CBF_cif, etc. */
| ^~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:30707:36: warning: unused variable 'atnexus' [-Wunused-variable]
30707 | int save_innexus, innexus, atnexus; /* within or at NXentry */
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_read_h5file_group':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31937:13: warning: unused variable 'errorcode' [-Wunused-variable]
31937 | int errorcode = 0;
| ^~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:31933:19: warning: unused variable 'node' [-Wunused-variable]
31933 | cbf_node *node;
| ^~~~
At top level:
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20853:16: warning: 'cbf_write_nx2cbf__cbfdb_op' defined but not used [-Wunused-function]
20853 | static int cbf_write_nx2cbf__cbfdb_op
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:20641:16: warning: 'cbf_write_nx2cbf__cbfcat_op' defined but not used [-Wunused-function]
20641 | static int cbf_write_nx2cbf__cbfcat_op
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:9133:16: warning: 'cbf_require_nxdetectors' defined but not used [-Wunused-function]
9133 | static int cbf_require_nxdetectors(const cbf_handle handle,
| ^~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c: In function 'cbf_get_nxdata_field_name2.isra':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:37: warning: '%06d' directive writing between 6 and 10 bytes into a region of size 7 [-Wformat-overflow=]
6345 | sprintf(buffer,"%06d",block);
| ^~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:6345:36: note: directive argument in the range [1, 2147483647]
6345 | sprintf(buffer,"%06d",block);
| ^~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/hdf5/serial/H5Epublic.h:20,
from /usr/include/hdf5/serial/hdf5.h:26,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:258:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 7 and 11 bytes into a destination of size 7
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265,
from /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:260:
In function 'strncat',
inlined from 'cbf_create_h5handle2' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17932:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:17934:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2u' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18014:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'strncat',
inlined from 'cbf_create_h5handle2u' at /build/cbflib-0.9.6+dfsg1/src/cbf_hdf5.c:18016:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:136:10: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation]
136 | return __builtin___strncat_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c: In function 'cbf_h5z_filter':
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:751:71: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
751 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit real IEEE\"\n",
| ~~^
| |
| long int
| %d
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:755:75: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
755 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit integer\"\n",
| ~~^
| |
| long int
| %d
/build/cbflib-0.9.6+dfsg1/src/cbf_hdf5_filter.c:758:77: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=]
758 | sprintf (text, "X-Binary-Element-Type: \"unsigned %ld-bit integer\"\n",
| ~~^
| |
| long int
| %d
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264,
from /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259:
In function 'strncpy',
inlined from 'cbf_append_string.part.0' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_append_string.part.0':
/build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here
302 | srclen = strlen(src);
| ^~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_minicbf_header.h:264,
from /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:259:
In function 'strncpy',
inlined from 'cbf_append_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:325:9,
inlined from 'cbf_append_string' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:293:16,
inlined from 'cbf_set_minicbf_header' at /build/cbflib-0.9.6+dfsg1/src/cbf_minicbf_header.c:429:13:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_decompress_nibble_offset':
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:1396:45: warning: right shift count >= width of type [-Wshift-count-overflow]
1396 | if ((((long)delta[0]>>32)&0xFFFFFFFFL)==0x80000000L&&(((long)delta[0]&0xFFFFFFFFl)==0L)) {
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:1400:49: warning: right shift count >= width of type [-Wshift-count-overflow]
1400 | if ((((long)delta[0]>>32)&0x80000000L) == 0x80000000L) {
| ^~
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_compress_nibble_offset':
/build/cbflib-0.9.6+dfsg1/src/cbf_nibble_offset.c:936:21: warning: 'dmode[0]' may be used uninitialized in this function [-Wmaybe-uninitialized]
936 | curmode = dmode[inrun];
| ~~~~~~~~^~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c: In function 'cbf_set_reference_beam_center':
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:44: warning: variable 'ncenter2' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_simple.c:8587:34: warning: variable 'ncenter1' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c: In function 'cbf_lex_wrapper':
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c:370:13: warning: variable 'cbffile' set but not used [-Wunused-but-set-variable]
370 | cbf_file *cbffile;
| ^~~~~~~
At top level:
/build/cbflib-0.9.6+dfsg1/src/cbf_stx.c:827:26: warning: 'yytname' defined but not used [-Wunused-const-variable=]
827 | static const char *const yytname[] =
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/src/img.c: In function 'img_read_mar345header':
/build/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of 'char[65]' [-Warray-bounds]
1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0';
| ~~~^~
/build/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing 'C64'
1230 | char C64[65], D64[65], *C, *D, *E;
| ^~~
gcc -o /build/cbflib-0.9.6+dfsg1/solib/libcbf.so *.o -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname -Wl,libcbf.so.1 -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5
rm -f *.o
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cif2cbf
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265,
from /build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:465:
In function 'strncpy',
inlined from 'main' at /build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2015:25:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c: In function 'main':
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2012:28: note: length computed here
2012 | dbsz = strlen(datablock_name+idb);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c /build/cbflib-0.9.6+dfsg1/src/fgetln.c -lm -o /build/cbflib-0.9.6+dfsg1/bin/cbf_standardize_numbers
In file included from /usr/include/hdf5/serial/H5public.h:35,
from /usr/include/hdf5/serial/hdf5.h:22,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:9:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c: In function 'main':
/build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:60:24: warning: '%d' directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=]
60 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0);
| ^~
/build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:60:20: note: directive argument in the range [0, 2147483647]
60 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0);
| ^~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/hdf5/serial/H5Epublic.h:20,
from /usr/include/hdf5/serial/hdf5.h:26,
from /build/cbflib-0.9.6+dfsg1/include/cbf.h:253,
from /build/cbflib-0.9.6+dfsg1/examples/cbf_standardize_numbers.c:9:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 6 and 15 bytes into a destination of size 10
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/arm-linux-gnueabihf/bits/libc-header-start.h:33,
from /usr/include/stdio.h:27,
from /build/cbflib-0.9.6+dfsg1/src/fgetln.c:30:
/usr/include/features.h:187:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp]
187 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE"
| ^~~~~~~
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/convert_image.c /build/cbflib-0.9.6+dfsg1/src/img.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/convert_image
/build/cbflib-0.9.6+dfsg1/examples/convert_image.c: In function 'main':
/build/cbflib-0.9.6+dfsg1/examples/convert_image.c:533:7: warning: variable 'transpose' set but not used [-Wunused-but-set-variable]
533 | int transpose;
| ^~~~~~~~~
/build/cbflib-0.9.6+dfsg1/src/img.c: In function 'img_read_mar345header':
/build/cbflib-0.9.6+dfsg1/src/img.c:1334:44: warning: array subscript -1 is outside array bounds of 'char[65]' [-Warray-bounds]
1334 | for (C = C64+strlen(C64)-1; (C != C64-1 && *C == ' '); C-- ) *C = '\0';
| ~~~^~
/build/cbflib-0.9.6+dfsg1/src/img.c:1230:8: note: while referencing 'C64'
1230 | char C64[65], D64[65], *C, *D, *E;
| ^~~
/usr/bin/ld: /tmp/cc9cIA3w.o: in function `main':
././examples/convert_image.c:672: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp'
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/convert_minicbf.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/convert_minicbf
chmod 755 /build/cbflib-0.9.6+dfsg1/examples/batch_convert_minicbf.sh
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/img2cif.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/img2cif
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/makecbf.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/makecbf
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/minicbf2nexus.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/minicbf2nexus
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/nexus2cbf.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/nexus2cbf
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/roi_peaksearch.c /build/cbflib-0.9.6+dfsg1/examples/dps_peaksearch.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/roi_peaksearch
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/sequence_match.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/sequence_match
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testcell.C -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testcell
bash: line 1: g: command not found
make[2]: [Makefile:1762: /build/cbflib-0.9.6+dfsg1/bin/testcell] Error 127 (ignored)
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /build/cbflib-0.9.6+dfsg1/examples/testalloc.c -L/build/cbflib-0.9.6+dfsg1/lib /build/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /build/cbflib-0.9.6+dfsg1/bin/testalloc.tmp
mv /build/cbflib-0.9.6+dfsg1/bin/testalloc.tmp /build/cbflib-0.9.6+dfsg1/bin/testalloc
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testreals.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testreals
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testflat.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testflat
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testflatpacked.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testflatpacked
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testhdf5.c -L/build/cbflib-0.9.6+dfsg1/lib /build/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testhdf5.tmp
mv /build/cbflib-0.9.6+dfsg1/bin/testhdf5.tmp /build/cbflib-0.9.6+dfsg1/bin/testhdf5
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /build/cbflib-0.9.6+dfsg1/examples/test_cbf_airy_disk.c -L/build/cbflib-0.9.6+dfsg1/lib /build/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /build/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk.tmp
mv /build/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk.tmp /build/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial /build/cbflib-0.9.6+dfsg1/examples/cbf_testxfelread.c -L/build/cbflib-0.9.6+dfsg1/lib /build/cbflib-0.9.6+dfsg1/lib/libcbf.a -lm -o /build/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread.tmp
mv /build/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread.tmp /build/cbflib-0.9.6+dfsg1/bin/cbf_testxfelread
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
# build the python extension.
/usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.6+dfsg1/pycbf/setup.py
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
make[2]: '/build/cbflib-0.9.6+dfsg1/pycbf/setup.py' is up to date.
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_build --buildsystem=pybuild --sourcedirectory=pycbf
I: pybuild base:232: /usr/bin/python3 setup.py build
running build
running build_py
copying pycbf.py -> /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build
running build_ext
building '_pycbf' extension
creating build
creating build/src
creating build/temp.linux-armhf-3.9
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/build/cbflib-0.9.6+dfsg1/include -I/usr/include/python3.9 -c ../src/cbf_simple.c -o build/temp.linux-armhf-3.9/../src/cbf_simple.o -I/usr/include/hdf5/serial
../src/cbf_simple.c: In function 'cbf_get_array_section_pixel_sizes':
../src/cbf_simple.c:1688:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1688 | for (ii=0; ii < (ssize_t)rank; ii++) {
| ^
../src/cbf_simple.c:1844:40: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1844 | for (ii=0; ii < rank && ii < (ssize_t)(detector-> axes) && !error; ii++) {
| ^
../src/cbf_simple.c: In function 'cbf_set_reference_beam_center':
../src/cbf_simple.c:8587:44: warning: variable 'ncenter2' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
../src/cbf_simple.c:8587:34: warning: variable 'ncenter1' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/build/cbflib-0.9.6+dfsg1/include -I/usr/include/python3.9 -c pycbf_wrap.c -o build/temp.linux-armhf-3.9/pycbf_wrap.o -I/usr/include/hdf5/serial
pycbf_wrap.c: In function 'cbf_handle_struct_set_image':
pycbf_wrap.c:4074:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4074 | void *array;
| ^~~~~
pycbf_wrap.c:4072:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4072 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims':
pycbf_wrap.c:4289:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4289 | void *array;
| ^~~~~
pycbf_wrap.c:4288:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4288 | size_t els, ele;
| ^~~
pycbf_wrap.c:4288:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4288 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_fs':
pycbf_wrap.c:4383:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4383 | void *array;
| ^~~~~
pycbf_wrap.c:4381:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4381 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_sf':
pycbf_wrap.c:4418:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4418 | void *array;
| ^~~~~
pycbf_wrap.c:4416:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4416 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_image_fs':
pycbf_wrap.c:4460:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4460 | void *array;
| ^~~~~
pycbf_wrap.c:4458:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4458 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image':
pycbf_wrap.c:4611:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4611 | void *array;
| ^~~~~
pycbf_wrap.c:4609:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4609 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_sf':
pycbf_wrap.c:4634:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4634 | void *array;
| ^~~~~
pycbf_wrap.c:4633:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4633 | size_t els, ele;
| ^~~
pycbf_wrap.c:4633:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4633 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image':
pycbf_wrap.c:4782:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4782 | void *array;
| ^~~~~
pycbf_wrap.c:4780:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4780 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims':
pycbf_wrap.c:4832:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4832 | void *array;
| ^~~~~
pycbf_wrap.c:4831:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4831 | size_t els, ele;
| ^~~
pycbf_wrap.c:4831:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4831 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_fs':
pycbf_wrap.c:4908:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4908 | void *array;
| ^~~~~
pycbf_wrap.c:4906:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4906 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_sf':
pycbf_wrap.c:5004:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5004 | void *array;
| ^~~~~
pycbf_wrap.c:5002:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5002 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_sf':
pycbf_wrap.c:5060:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5060 | void *array;
| ^~~~~
pycbf_wrap.c:5059:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5059 | size_t els, ele;
| ^~~
pycbf_wrap.c:5059:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5059 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image':
pycbf_wrap.c:5091:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5091 | void *array;
| ^~~~~
pycbf_wrap.c:5089:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5089 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_sf':
pycbf_wrap.c:5147:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5147 | void *array;
| ^~~~~
pycbf_wrap.c:5145:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5145 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray':
pycbf_wrap.c:5223:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5223 | void *array;
| ^~~~~
pycbf_wrap.c:5222:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5222 | size_t els, ele;
| ^~~
pycbf_wrap.c:5222:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5222 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray':
pycbf_wrap.c:5295:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5295 | void *array;
| ^~~~~
pycbf_wrap.c:5294:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5294 | size_t els, ele;
| ^~~
pycbf_wrap.c:5294:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5294 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_fs':
pycbf_wrap.c:5380:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5380 | void *array;
| ^~~~~
pycbf_wrap.c:5378:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5378 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_fs':
pycbf_wrap.c:5422:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5422 | void *array;
| ^~~~~
pycbf_wrap.c:5421:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5421 | size_t els, ele;
| ^~~
pycbf_wrap.c:5421:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5421 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_fs':
pycbf_wrap.c:5447:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5447 | void *array;
| ^~~~~
pycbf_wrap.c:5446:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5446 | size_t els, ele;
| ^~~
pycbf_wrap.c:5446:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5446 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_image_sf':
pycbf_wrap.c:5468:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5468 | void *array;
| ^~~~~
pycbf_wrap.c:5466:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5466 | size_t els;
| ^~~
At top level:
pycbf_wrap.c:3469:16: warning: 'convert_iarray' defined but not used [-Wunused-function]
3469 | static int convert_iarray(PyObject *input, int *ptr, int size) {
| ^~~~~~~~~~~~~~
pycbf_wrap.c:3445:17: warning: 'convert_larray' defined but not used [-Wunused-function]
3445 | static long convert_larray(PyObject *input, long *ptr, int size) {
| ^~~~~~~~~~~~~~
pycbf_wrap.c: In function 'get_error_message':
pycbf_wrap.c:3510:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3510 | sprintf(error_message,"%s %s",error_message,"CBF_FORMAT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3512:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3512 | sprintf(error_message,"%s %s",error_message,"CBF_ALLOC ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3514:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3514 | sprintf(error_message,"%s %s",error_message,"CBF_ARGUMENT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3516:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3516 | sprintf(error_message,"%s %s",error_message,"CBF_ASCII ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3518:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3518 | sprintf(error_message,"%s %s",error_message,"CBF_BINARY ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3520:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3520 | sprintf(error_message,"%s %s",error_message,"CBF_BITCOUNT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3522:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3522 | sprintf(error_message,"%s %s",error_message,"CBF_ENDOFDATA ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3524:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3524 | sprintf(error_message,"%s %s",error_message,"CBF_FILECLOSE ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3526:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3526 | sprintf(error_message,"%s %s",error_message,"CBF_FILEOPEN ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3528:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3528 | sprintf(error_message,"%s %s",error_message,"CBF_FILEREAD ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3530:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3530 | sprintf(error_message,"%s %s",error_message,"CBF_FILESEEK ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3532:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3532 | sprintf(error_message,"%s %s",error_message,"CBF_FILETELL ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3534:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3534 | sprintf(error_message,"%s %s",error_message,"CBF_FILEWRITE ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3536:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3536 | sprintf(error_message,"%s %s",error_message,"CBF_IDENTICAL ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3538:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3538 | sprintf(error_message,"%s %s",error_message,"CBF_NOTFOUND ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3540:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3540 | sprintf(error_message,"%s %s",error_message,"CBF_OVERFLOW ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3542:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3542 | sprintf(error_message,"%s %s",error_message,"CBF_UNDEFINED ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3544:31: warning: '%s' directive writing 18 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3544 | sprintf(error_message,"%s %s",error_message,"CBF_NOTIMPLEMENTED");
| ^~ ~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 20 and 1043 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3546:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3546 | sprintf(error_message,"%s %s",error_message,"CBF_NOCOMPRESSION");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'cbf_handle_struct_get_integerarrayparameters_wdims_sf' at pycbf_wrap.c:4980:9,
inlined from '_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf' at pycbf_wrap.c:16981:5:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c: In function '_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf':
pycbf_wrap.c:4978:18: note: length computed here
4978 | *bolen = strlen(byteorder);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'cbf_handle_struct_get_realarrayparameters_wdims_sf' at pycbf_wrap.c:4366:9,
inlined from '_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf' at pycbf_wrap.c:12615:5:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c: In function '_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf':
pycbf_wrap.c:4364:18: note: length computed here
4364 | *bolen = strlen(byteorder);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'SWIG_Python_FixMethods' at pycbf_wrap.c:29493:15,
inlined from 'PyInit__pycbf' at pycbf_wrap.c:29593:3:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 10 bytes from a string of the same length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/../src/cbf_simple.o build/temp.linux-armhf-3.9/pycbf_wrap.o -L../solib/ -L../lib/ -L/build/cbflib-0.9.6+dfsg1/lib -lcbf -o /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/_pycbf.cpython-39-arm-linux-gnueabihf.so
I: pybuild base:232: /usr/bin/python3-dbg setup.py build
running build
running build_py
copying pycbf.py -> /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build
running build_ext
building '_pycbf' extension
creating build/temp.linux-armhf-3.9-pydebug
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Og -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/build/cbflib-0.9.6+dfsg1/include -I/usr/include/python3.9d -c ../src/cbf_simple.c -o build/temp.linux-armhf-3.9-pydebug/../src/cbf_simple.o -I/usr/include/hdf5/serial
../src/cbf_simple.c: In function 'cbf_get_array_section_pixel_sizes':
../src/cbf_simple.c:1688:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1688 | for (ii=0; ii < (ssize_t)rank; ii++) {
| ^
../src/cbf_simple.c:1844:40: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1844 | for (ii=0; ii < rank && ii < (ssize_t)(detector-> axes) && !error; ii++) {
| ^
../src/cbf_simple.c: In function 'cbf_set_reference_beam_center':
../src/cbf_simple.c:8587:44: warning: variable 'ncenter2' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
../src/cbf_simple.c:8587:34: warning: variable 'ncenter1' set but not used [-Wunused-but-set-variable]
8587 | double nindex1, nindex2, ncenter1, ncenter2;
| ^~~~~~~~
arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -g -Og -Wall -g -Og -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -Og -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I../include -I/build/cbflib-0.9.6+dfsg1/include -I/usr/include/python3.9d -c pycbf_wrap.c -o build/temp.linux-armhf-3.9-pydebug/pycbf_wrap.o -I/usr/include/hdf5/serial
pycbf_wrap.c: In function 'cbf_handle_struct_set_image':
pycbf_wrap.c:4074:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4074 | void *array;
| ^~~~~
pycbf_wrap.c:4072:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4072 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims':
pycbf_wrap.c:4289:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4289 | void *array;
| ^~~~~
pycbf_wrap.c:4288:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4288 | size_t els, ele;
| ^~~
pycbf_wrap.c:4288:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4288 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_fs':
pycbf_wrap.c:4383:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4383 | void *array;
| ^~~~~
pycbf_wrap.c:4381:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4381 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_sf':
pycbf_wrap.c:4418:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4418 | void *array;
| ^~~~~
pycbf_wrap.c:4416:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4416 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_image_fs':
pycbf_wrap.c:4460:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4460 | void *array;
| ^~~~~
pycbf_wrap.c:4458:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4458 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image':
pycbf_wrap.c:4611:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4611 | void *array;
| ^~~~~
pycbf_wrap.c:4609:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4609 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_sf':
pycbf_wrap.c:4634:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4634 | void *array;
| ^~~~~
pycbf_wrap.c:4633:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4633 | size_t els, ele;
| ^~~
pycbf_wrap.c:4633:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4633 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image':
pycbf_wrap.c:4782:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4782 | void *array;
| ^~~~~
pycbf_wrap.c:4780:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4780 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims':
pycbf_wrap.c:4832:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4832 | void *array;
| ^~~~~
pycbf_wrap.c:4831:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
4831 | size_t els, ele;
| ^~~
pycbf_wrap.c:4831:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4831 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_fs':
pycbf_wrap.c:4908:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
4908 | void *array;
| ^~~~~
pycbf_wrap.c:4906:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
4906 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_sf':
pycbf_wrap.c:5004:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5004 | void *array;
| ^~~~~
pycbf_wrap.c:5002:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5002 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_sf':
pycbf_wrap.c:5060:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5060 | void *array;
| ^~~~~
pycbf_wrap.c:5059:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5059 | size_t els, ele;
| ^~~
pycbf_wrap.c:5059:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5059 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image':
pycbf_wrap.c:5091:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5091 | void *array;
| ^~~~~
pycbf_wrap.c:5089:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5089 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_sf':
pycbf_wrap.c:5147:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5147 | void *array;
| ^~~~~
pycbf_wrap.c:5145:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5145 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray':
pycbf_wrap.c:5223:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5223 | void *array;
| ^~~~~
pycbf_wrap.c:5222:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5222 | size_t els, ele;
| ^~~
pycbf_wrap.c:5222:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5222 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray':
pycbf_wrap.c:5295:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5295 | void *array;
| ^~~~~
pycbf_wrap.c:5294:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5294 | size_t els, ele;
| ^~~
pycbf_wrap.c:5294:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5294 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_fs':
pycbf_wrap.c:5380:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5380 | void *array;
| ^~~~~
pycbf_wrap.c:5378:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5378 | size_t els;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_fs':
pycbf_wrap.c:5422:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5422 | void *array;
| ^~~~~
pycbf_wrap.c:5421:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5421 | size_t els, ele;
| ^~~
pycbf_wrap.c:5421:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5421 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_fs':
pycbf_wrap.c:5447:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5447 | void *array;
| ^~~~~
pycbf_wrap.c:5446:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable]
5446 | size_t els, ele;
| ^~~
pycbf_wrap.c:5446:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5446 | size_t els, ele;
| ^~~
pycbf_wrap.c: In function 'cbf_handle_struct_set_image_sf':
pycbf_wrap.c:5468:15: warning: variable 'array' set but not used [-Wunused-but-set-variable]
5468 | void *array;
| ^~~~~
pycbf_wrap.c:5466:16: warning: variable 'els' set but not used [-Wunused-but-set-variable]
5466 | size_t els;
| ^~~
At top level:
pycbf_wrap.c:3469:16: warning: 'convert_iarray' defined but not used [-Wunused-function]
3469 | static int convert_iarray(PyObject *input, int *ptr, int size) {
| ^~~~~~~~~~~~~~
pycbf_wrap.c:3445:17: warning: 'convert_larray' defined but not used [-Wunused-function]
3445 | static long convert_larray(PyObject *input, long *ptr, int size) {
| ^~~~~~~~~~~~~~
pycbf_wrap.c: In function 'get_error_message':
pycbf_wrap.c:3510:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3510 | sprintf(error_message,"%s %s",error_message,"CBF_FORMAT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3512:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3512 | sprintf(error_message,"%s %s",error_message,"CBF_ALLOC ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3514:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3514 | sprintf(error_message,"%s %s",error_message,"CBF_ARGUMENT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3516:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3516 | sprintf(error_message,"%s %s",error_message,"CBF_ASCII ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3518:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3518 | sprintf(error_message,"%s %s",error_message,"CBF_BINARY ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3520:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3520 | sprintf(error_message,"%s %s",error_message,"CBF_BITCOUNT ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3522:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3522 | sprintf(error_message,"%s %s",error_message,"CBF_ENDOFDATA ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3524:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3524 | sprintf(error_message,"%s %s",error_message,"CBF_FILECLOSE ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3526:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3526 | sprintf(error_message,"%s %s",error_message,"CBF_FILEOPEN ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3528:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3528 | sprintf(error_message,"%s %s",error_message,"CBF_FILEREAD ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3530:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3530 | sprintf(error_message,"%s %s",error_message,"CBF_FILESEEK ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3532:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3532 | sprintf(error_message,"%s %s",error_message,"CBF_FILETELL ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3534:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3534 | sprintf(error_message,"%s %s",error_message,"CBF_FILEWRITE ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3536:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3536 | sprintf(error_message,"%s %s",error_message,"CBF_IDENTICAL ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3538:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3538 | sprintf(error_message,"%s %s",error_message,"CBF_NOTFOUND ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3540:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3540 | sprintf(error_message,"%s %s",error_message,"CBF_OVERFLOW ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3542:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3542 | sprintf(error_message,"%s %s",error_message,"CBF_UNDEFINED ");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3544:31: warning: '%s' directive writing 18 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3544 | sprintf(error_message,"%s %s",error_message,"CBF_NOTIMPLEMENTED");
| ^~ ~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 20 and 1043 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c:3546:31: warning: '%s' directive writing 17 bytes into a region of size between 0 and 1023 [-Wformat-overflow=]
3546 | sprintf(error_message,"%s %s",error_message,"CBF_NOCOMPRESSION");
| ^~ ~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/stdio.h:867,
from /usr/include/python3.9d/Python.h:25,
from pycbf_wrap.c:149:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 19 and 1042 bytes into a destination of size 1024
36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1,
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
37 | __bos (__s), __fmt, __va_arg_pack ());
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9d/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'cbf_handle_struct_get_integerarrayparameters_wdims_sf' at pycbf_wrap.c:4980:9,
inlined from '_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf' at pycbf_wrap.c:16981:5:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c: In function '_wrap_cbf_handle_struct_get_integerarrayparameters_wdims_sf':
pycbf_wrap.c:4978:18: note: length computed here
4978 | *bolen = strlen(byteorder);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9d/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'cbf_handle_struct_get_realarrayparameters_wdims_sf' at pycbf_wrap.c:4366:9,
inlined from '_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf' at pycbf_wrap.c:12615:5:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
pycbf_wrap.c: In function '_wrap_cbf_handle_struct_get_realarrayparameters_wdims_sf':
pycbf_wrap.c:4364:18: note: length computed here
4364 | *bolen = strlen(byteorder);
| ^~~~~~~~~~~~~~~~~
In file included from /usr/include/string.h:495,
from /usr/include/python3.9d/Python.h:30,
from pycbf_wrap.c:149:
In function 'strncpy',
inlined from 'SWIG_Python_FixMethods' at pycbf_wrap.c:29493:15,
inlined from 'PyInit__pycbf' at pycbf_wrap.c:29593:3:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' output truncated before terminating nul copying 10 bytes from a string of the same length [-Wstringop-truncation]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9-pydebug/../src/cbf_simple.o build/temp.linux-armhf-3.9-pydebug/pycbf_wrap.o -L../solib/ -L../lib/ -L/build/cbflib-0.9.6+dfsg1/lib -lcbf -o /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/_pycbf.cpython-39d-arm-linux-gnueabihf.so
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
create-stamp debian/debhelper-build-stamp
dh_testroot -O--no-parallel
dh_prep -O--no-parallel
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
# install the C/C++ library
dh_auto_install
make -j1 install DESTDIR=/build/cbflib-0.9.6\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true"
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
g++ -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cif2c.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cif2c
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
gcc -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/cif2cbf
In file included from /usr/include/string.h:495,
from /build/cbflib-0.9.6+dfsg1/include/cbf_hdf5.h:265,
from /build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:465:
In function 'strncpy',
inlined from 'main' at /build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2015:25:
/usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=]
106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest));
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c: In function 'main':
/build/cbflib-0.9.6+dfsg1/examples/cif2cbf.c:2012:28: note: length computed here
2012 | dbsz = strlen(datablock_name+idb);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
mkdir -p /build/cbflib-0.9.6+dfsg1/bin
g++ -g -O2 -fdebug-prefix-map=/build/cbflib-0.9.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.6+dfsg1/include -I/build/cbflib-0.9.6+dfsg1/src -I/usr/include/hdf5/serial \
/build/cbflib-0.9.6+dfsg1/examples/testcell.C -L/build/cbflib-0.9.6+dfsg1/lib \
-lcbf -lm -L/usr/lib/arm-linux-gnueabihf/hdf5/serial -lhdf5 -o /build/cbflib-0.9.6+dfsg1/bin/testcell
mkdir -p /build/cbflib-0.9.6+dfsg1/debian/tmp/usr
mkdir -p /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf
mkdir -p /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin
mkdir -p /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include
mkdir -p /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib
#
# libcbf
#
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a
chmod: cannot access '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a': No such file or directory
make[2]: [Makefile:1101: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf_old.a
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a': No such file or directory
make[2]: [Makefile:1102: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/lib/libcbf.a /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a
#-chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so
#-cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf_old.so
cp /build/cbflib-0.9.6+dfsg1/solib/libcbf.so /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so.1.0.0
ln -s -r -f /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so.1.0.0 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so.1
ln -s -r -f /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so.1.0.0 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so
#ln -s -f /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/lib_cbf.so
chmod 644 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.a
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/lib/arm-linux-gnueabihf/libcbf.so
#
# includes
#
chmod -R 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib
chmod -R 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib
rm -rf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib_old
cp -r /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib_old
rm -rf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib
cp -r /build/cbflib-0.9.6+dfsg1/include /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib
chmod 644 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/include/cbflib/*.h
#
# libfcb
#
#
# libimg
#
#
# programs
#
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf': No such file or directory
make[2]: [Makefile:1131: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/adscimg2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/adscimg2cbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg': No such file or directory
make[2]: [Makefile:1133: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/cbf2adscimg /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2adscimg
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers \
/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers': No such file or directory
make[2]: [Makefile:1135: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/cbf_standardize_numbers /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image': No such file or directory
make[2]: [Makefile:1137: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/convert_image /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf': No such file or directory
make[2]: [Makefile:1139: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/convert_minicbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf': No such file or directory
make[2]: [Makefile:1141: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/makecbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif': No such file or directory
make[2]: [Makefile:1143: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/img2cif /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf': No such file or directory
make[2]: [Makefile:1145: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/cif2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus': No such file or directory
make[2]: [Makefile:1147: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/minicbf2nexus /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus': No such file or directory
make[2]: [Makefile:1149: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/cbf2nexus /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf': No such file or directory
make[2]: [Makefile:1151: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/nexus2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch': No such file or directory
make[2]: [Makefile:1153: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/roi_peaksearch /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match': No such file or directory
make[2]: [Makefile:1155: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/sequence_match /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc': No such file or directory
make[2]: [Makefile:1157: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/testalloc /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test': No such file or directory
make[2]: [Makefile:1159: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/arvai_test /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c': No such file or directory
make[2]: [Makefile:1161: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/cif2c /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals': No such file or directory
make[2]: [Makefile:1163: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/testreals /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat': No such file or directory
make[2]: [Makefile:1165: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/testflat /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked': No such file or directory
make[2]: [Makefile:1167: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/testflatpacked /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked
#-cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf_old
#cp /build/cbflib-0.9.6+dfsg1/bin/tiff2cbf /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/tiff2cbf
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk': No such file or directory
make[2]: [Makefile:1171: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old
cp /build/cbflib-0.9.6+dfsg1/bin/test_cbf_airy_disk /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5_old
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5': No such file or directory
make[2]: [Makefile:1175: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/bin/testhdf5 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5
cp /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf_old.sh
cp: cannot stat '/build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh': No such file or directory
make[2]: [Makefile:1177: baseinstall] Error 1 (ignored)
cp /build/cbflib-0.9.6+dfsg1/examples/batch_convert_minicbf.sh /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/arvai_test
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf2nexus
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2c
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/cif2cbf
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_image
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/convert_minicbf
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/img2cif
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/makecbf
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/minicbf2nexus
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/nexus2cbf
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/roi_peaksearch
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/sequence_match
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testalloc
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflat
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testflatpacked
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testhdf5
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/testreals
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk
chmod 755 /build/cbflib-0.9.6+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
# install the python extension
/usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.6+dfsg1/pycbf/setup.py
make[2]: Entering directory '/build/cbflib-0.9.6+dfsg1'
make[2]: '/build/cbflib-0.9.6+dfsg1/pycbf/setup.py' is up to date.
make[2]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_auto_install --buildsystem=pybuild --sourcedirectory=pycbf
I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf
running install
running build
running build_py
running build_ext
running install_lib
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages
copying /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/_pycbf.cpython-39-arm-linux-gnueabihf.so -> /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages
copying /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_pycbf/build/pycbf.py -> /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages
byte-compiling /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages/pycbf.py to pycbf.cpython-39.pyc
running install_egg_info
Writing /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf/usr/lib/python3.9/dist-packages/_pycbf-0.0.0.egg-info
I: pybuild base:232: /usr/bin/python3-dbg setup.py install --root /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg
running install
running build
running build_py
running build_ext
running install_lib
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9
creating /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages
copying /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/_pycbf.cpython-39d-arm-linux-gnueabihf.so -> /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages
copying /build/cbflib-0.9.6+dfsg1/.pybuild/cpython3_3.9_dbg_pycbf/build/pycbf.py -> /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages
byte-compiling /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages/pycbf.py to pycbf.cpython-39.pyc
running install_egg_info
Writing /build/cbflib-0.9.6+dfsg1/debian/python3-pycbf-dbg/usr/lib/python3.9/dist-packages/_pycbf-0.0.0.egg-info
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
debian/rules override_dh_install
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
# cbflib-bin
dh_install -p cbflib-bin usr/bin/cbf2nexus
dh_install -p cbflib-bin usr/bin/cif2cbf
dh_install -p cbflib-bin usr/bin/convert_image
dh_install -p cbflib-bin usr/bin/img2cif
dh_install -p cbflib-bin usr/bin/makecbf
# libcbf-dev
dh_install -p libcbf-dev usr/include/cbflib/*
dh_install -p libcbf-dev usr/lib/*/lib*.a
dh_install -p libcbf-dev usr/lib/*/lib*.so
# libcbf1
dh_install -p libcbf1 usr/lib/*/libcbf.so.*
# Exclude duplicates (lintian check duplicate-files)
dh_install -Xcif_img_1.3.2_22Jun05.html -Xcif_img_1.3.1.html
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
debian/rules override_dh_installdocs
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
# cbflib-doc
dh_install -p cbflib-doc doc/*.html usr/share/doc/cbflib-doc/html
dh_installdocs -p cbflib-doc html_graphics
dh_installdocs: warning: Cannot auto-detect main package for cbflib-doc. If the default is wrong, please use --doc-main-package
# libcbf-dev
dh_installdocs -p libcbf-dev README
dh_installdocs
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_installchangelogs -O--no-parallel
debian/rules override_dh_installman
make[1]: Entering directory '/build/cbflib-0.9.6+dfsg1'
dh_installman -p cbflib-bin debian/manpages/*
make[1]: Leaving directory '/build/cbflib-0.9.6+dfsg1'
dh_python3 -O--no-parallel
dh_installinit -O--no-parallel
dh_installsystemduser -O--no-parallel
dh_perl -O--no-parallel
dh_link -O--no-parallel
dh_strip_nondeterminism -O--no-parallel
dh_compress -O--no-parallel
dh_fixperms -O--no-parallel
dh_missing -O--no-parallel
dh_missing: warning: usr/bin/adscimg2cbf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/arvai_test exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/batch_convert_minicbf.sh exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/cbf2adscimg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/cbf_standardize_numbers exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/cif2c exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/convert_minicbf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/minicbf2nexus exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/nexus2cbf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/roi_peaksearch exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/sequence_match exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/test_cbf_airy_disk exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/test_cbf_airy_disk_old exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/testalloc exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/testflat exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/testflatpacked exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/testhdf5 exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/bin/testreals exists in debian/tmp but is not installed to anywhere
The following debhelper tools have reported what they installed (with files per package)
* dh_install: cbflib-bin (5), cbflib-doc (230), libcbf-dev (37), libcbf1 (2), python3-pycbf (0), python3-pycbf-dbg (0)
* dh_installdocs: cbflib-bin (0), cbflib-doc (1), libcbf-dev (1), libcbf1 (0), python3-pycbf (0), python3-pycbf-dbg (0)
* dh_installman: cbflib-bin (4), cbflib-doc (0), libcbf-dev (0), libcbf1 (0), python3-pycbf (0), python3-pycbf-dbg (0)
If the missing files are installed by another tool, please file a bug against it.
When filing the report, if the tool is not part of debhelper itself, please reference the
"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
(in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
If the omission is intentional or no other helper can take care of this consider adding the
paths to debian/not-installed.
dh_dwz -O--no-parallel
dh_strip -O--no-parallel
dh_makeshlibs -O--no-parallel
dh_shlibdeps -O--no-parallel
dh_installdeb -O--no-parallel
dh_gencontrol -O--no-parallel
dpkg-gencontrol: warning: package python3-pycbf-dbg: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-pycbf-dbg: substitution variable ${python3:Versions} unused, but is defined
dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Versions} unused, but is defined
dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Provides} unused, but is defined
dpkg-gencontrol: warning: package python3-pycbf: substitution variable ${python3:Versions} unused, but is defined
dh_md5sums -O--no-parallel
dh_builddeb -O--no-parallel
dpkg-deb: building package 'libcbf-dev' in '../libcbf-dev_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'cbflib-bin' in '../cbflib-bin_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'python3-pycbf-dbgsym' in '../python3-pycbf-dbgsym_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'python3-pycbf-dbg' in '../python3-pycbf-dbg_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'cbflib-doc' in '../cbflib-doc_0.9.6+dfsg1-2_all.deb'.
dpkg-deb: building package 'libcbf1' in '../libcbf1_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'cbflib-bin-dbgsym' in '../cbflib-bin-dbgsym_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'libcbf1-dbgsym' in '../libcbf1-dbgsym_0.9.6+dfsg1-2_armhf.deb'.
dpkg-deb: building package 'python3-pycbf' in '../python3-pycbf_0.9.6+dfsg1-2_armhf.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../cbflib_0.9.6+dfsg1-2_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/25053/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/25053 and its subdirectories
I: Current time: Wed Jul 28 16:22:48 +14 2021
I: pbuilder-time-stamp: 1627438968