I: pbuilder: network access will be disabled during build I: Current time: Mon Jul 12 05:26:41 -12 2021 I: pbuilder-time-stamp: 1626110801 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [etsf-io_1.0.4-5.dsc] I: copying [./etsf-io_1.0.4.orig.tar.gz] I: copying [./etsf-io_1.0.4-5.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.PeIyLC7V/trustedkeys.kbx': General error gpgv: Signature made Sun Dec 27 19:22:49 2020 -12 gpgv: using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287 gpgv: issuer "merkys@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./etsf-io_1.0.4-5.dsc dpkg-source: info: extracting etsf-io in etsf-io-1.0.4 dpkg-source: info: unpacking etsf-io_1.0.4.orig.tar.gz dpkg-source: info: unpacking etsf-io_1.0.4-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying ignore_f90_test_module_with_syntax_error.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/10369/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='d001a1fa6697400fb85c70b1c41f2602' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='10369' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.GINLKlUFtF/pbuilderrc_5HSp --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.GINLKlUFtF/b1 --logfile b1/build.log etsf-io_1.0.4-5.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux jtx1a 5.10.0-7-arm64 #1 SMP Debian 5.10.40-1 (2021-05-28) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 10 21:25 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/10369/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-exec, gfortran, libnetcdf-dev (>= 1:4.3.3.1), libnetcdff-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev (>= 1:4.3.3.1); however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on libnetcdff-dev; however: Package libnetcdff-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli1{a} libcurl3-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libnetcdf-dev{a} libnetcdf18{a} libnetcdff-dev{a} libnetcdff7{a} libnghttp2-14{a} libpipeline1{a} libpsl5{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx pkg-config pkgconf publicsuffix wget 0 packages upgraded, 65 newly installed, 0 to remove and 0 not upgraded. Need to get 32.6 MB of archives. After unpacking 102 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf dh-exec armhf 0.23.2 [25.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libgfortran-10-dev armhf 10.2.1-6 [289 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf gfortran-10 armhf 10.2.1-6 [7123 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf gfortran armhf 4:10.2.1-1 [1424 B] Get: 37 http://deb.debian.org/debian bullseye/main armhf hdf5-helpers armhf 1.10.6+repack-4 [40.4 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libaec0 armhf 1.0.4-1 [20.4 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libsz2 armhf 1.0.4-1 [6616 B] Get: 40 http://deb.debian.org/debian bullseye/main armhf libaec-dev armhf 1.0.4-1 [18.3 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.1 [67.6 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.1 [99.1 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libldap-2.4-2 armhf 2.4.57+dfsg-3 [210 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libnghttp2-14 armhf 1.43.0-1 [65.6 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [55.2 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf libssh2-1 armhf 1.9.0-2 [143 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf libcurl3-gnutls armhf 7.74.0-1.3+b1 [306 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf libcurl4-gnutls-dev armhf 7.74.0-1.3+b1 [402 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf libhdf5-103-1 armhf 1.10.6+repack-4 [1178 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libhdf5-cpp-103-1 armhf 1.10.6+repack-4 [133 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf libhdf5-fortran-102 armhf 1.10.6+repack-4 [94.0 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-100 armhf 1.10.6+repack-4 [80.5 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-fortran-100 armhf 1.10.6+repack-4 [51.2 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libhdf5-hl-cpp-100 armhf 1.10.6+repack-4 [37.4 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo-dev armhf 1:2.0.6-4 [242 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libjpeg-dev armhf 1:2.0.6-4 [67.8 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libhdf5-dev armhf 1.10.6+repack-4 [2444 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf libnetcdf18 armhf 1:4.7.4-1 [355 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libnetcdf-dev armhf 1:4.7.4-1 [93.6 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libnetcdff7 armhf 4.5.3+ds-2 [108 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libnetcdff-dev armhf 4.5.3+ds-2 [305 kB] Fetched 32.6 MB in 12s (2796 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../07-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../10-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... 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Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libhdf5-hl-cpp-100:armhf (1.10.6+repack-4) ... Setting up libhdf5-fortran-102:armhf (1.10.6+repack-4) ... Setting up libnetcdf18:armhf (1:4.7.4-1) ... Setting up libhdf5-hl-fortran-100:armhf (1.10.6+repack-4) ... Setting up debhelper (13.3.4) ... Setting up dh-exec (0.23.2) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5-serial.pc to provide /usr/lib/arm-linux-gnueabihf/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdff7 (4.5.3+ds-2) ... Setting up libnetcdf-dev (1:4.7.4-1) ... Setting up libnetcdff-dev (4.5.3+ds-2) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/etsf-io-1.0.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../etsf-io_1.0.4-5_source.changes dpkg-buildpackage: info: source package etsf-io dpkg-buildpackage: info: source version 1.0.4-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrius Merkys dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf parallel-tests: installing 'config/test-driver' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/etsf-io-1.0.4' dh_auto_configure -- --docdir=\${prefix}/share/doc/libetsf-io-doc --with-moduledir=\${includedir} FCFLAGS="-O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security" ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --docdir=\${prefix}/share/doc/libetsf-io-doc --with-moduledir=\${includedir} "FCFLAGS=-O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security" checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gfortran... gfortran checking whether the Fortran compiler works... yes checking for Fortran compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU Fortran compiler... yes checking whether gfortran accepts -g... yes checking for Fortran flag to compile .f90 files... none checking whether we are using the GNU Fortran compiler... (cached) yes checking whether gfortran accepts -g... (cached) yes checking which type of Fortran compiler we have... gcc GNU checking whether the Fortran compiler accepts exit()... yes checking whether the Fortran compiler accepts flush()... yes checking for module extension for compiler 'gcc'... mod checking for ranlib... ranlib checking for ar... ar checking for NetCDF includes... -I/usr/include checking for NetCDF libraries... -lnetcdff -lnetcdf checking for NetCDF Fortran flags... checking for NetCDF... yes checking for parallel IO with NetCDF... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/low_level/Makefile config.status: creating src/group_level/Makefile config.status: creating src/tutorials/Makefile config.status: creating src/utils/Makefile config.status: creating tests/low_level/Makefile config.status: creating tests/group_level/Makefile config.status: creating tests/utils/Makefile config.status: creating doc/www/Makefile config.status: creating doc/www/low_level/Makefile config.status: creating doc/www/group_level/Makefile config.status: creating doc/www/utils/Makefile config.status: creating doc/www/tutorials/Makefile Basics: Prefix: /usr Fortran90 compiler: gfortran Fortran90 flags: -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include Linker flags: -Wl,-z,relro -Wl,-z,now Linked libraries: -lnetcdff -lnetcdf Installed module dir: ${includedir} Installed lib dir: ${prefix}/lib/arm-linux-gnueabihf Installed doc dir: ${prefix}/share/doc/libetsf-io-doc make[1]: Leaving directory '/build/etsf-io-1.0.4' dh_auto_build make -j3 make[1]: Entering directory '/build/etsf-io-1.0.4' Making all in src/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/low_level' gfortran -I/usr/include -I. -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o etsf_io_low_level.o etsf_io_low_level.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -I/usr/include -I. -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o netcdf4_wrappers.o netcdf4_wrappers.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran rm -f libetsf_io_low_level.a ar cru libetsf_io_low_level.a etsf_io_low_level.o netcdf4_wrappers.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libetsf_io_low_level.a make[2]: Leaving directory '/build/etsf-io-1.0.4/src/low_level' Making all in src/group_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/group_level' gfortran -I../../src/low_level -I. -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o etsf_io.o etsf_io.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran rm -f libetsf_io.a ar cru libetsf_io.a etsf_io.o ../../src/low_level/etsf_io_low_level.o ../../src/low_level/netcdf4_wrappers.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libetsf_io.a make[2]: Leaving directory '/build/etsf-io-1.0.4/src/group_level' Making all in src/utils make[2]: Entering directory '/build/etsf-io-1.0.4/src/utils' gfortran -I../../src/low_level -I../../src/group_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o etsf_io_file.o etsf_io_file.f90 gfortran -I../../src/low_level -I../../src/group_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o etsf_io_tools.o etsf_io_tools.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran rm -f libetsf_io_utils.a ar cru libetsf_io_utils.a etsf_io_file.o etsf_io_tools.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libetsf_io_utils.a gfortran -I../../src/low_level -I../../src/group_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o etsf_io.o etsf_io.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -I../../src/low_level -I../../src/group_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -L../../src/group_level -L. -Wl,-z,relro -Wl,-z,now -o etsf_io etsf_io.o -letsf_io_utils -letsf_io -lnetcdff -lnetcdf make[2]: Leaving directory '/build/etsf-io-1.0.4/src/utils' Making all in tests/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' Making all in tests/utils make[2]: Entering directory '/build/etsf-io-1.0.4/tests/utils' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' Making all in doc/www make[2]: Entering directory '/build/etsf-io-1.0.4/doc/www' Making all in low_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/low_level' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/low_level' Making all in group_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/group_level' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/group_level' Making all in tutorials make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/tutorials' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/tutorials' Making all in utils make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Entering directory '/build/etsf-io-1.0.4' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/etsf-io-1.0.4' make[1]: Leaving directory '/build/etsf-io-1.0.4' dh_auto_test make -j3 check VERBOSE=1 make[1]: Entering directory '/build/etsf-io-1.0.4' Making check in src/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/low_level' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/etsf-io-1.0.4/src/low_level' Making check in src/group_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/group_level' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/etsf-io-1.0.4/src/group_level' Making check in src/utils make[2]: Entering directory '/build/etsf-io-1.0.4/src/utils' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/etsf-io-1.0.4/src/utils' Making check in tests/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' make tests_read tests_write make[3]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' gfortran -I../../src/low_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o tests_read.o tests_read.f90 gfortran -I../../src/low_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -c -o tests_write.o tests_write.f90 f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran gfortran -I../../src/low_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -L../../src/low_level -Wl,-z,relro -Wl,-z,now -o tests_write tests_write.o -letsf_io_low_level -lnetcdff -lnetcdf gfortran -I../../src/low_level -I/usr/include -O2 -fPIC -g -O2 -fdebug-prefix-map=/build/etsf-io-1.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -I/usr/include -L../../src/low_level -Wl,-z,relro -Wl,-z,now -o tests_read tests_read.o -letsf_io_low_level -lnetcdff -lnetcdf make[3]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' make check-TESTS make[3]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' make[4]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' ./tests_read . | tee tests_read.log \rm -f open_create_t*.nc ./tests_write . | tee tests_write.log Testing etsf_io_low_open_read()... Testing etsf_io_low_open_create()... == argument filename: unknown file OK == == argument filename: text file OK == == argument filename: NetCDF without header OK == == argument filename: NetCDF with wrong file_format header OK == == argument filename: NetCDF with obsolete file_format_version OK == == argument version_min: NetCDF with obsolete file_format_version OK == == argument filename: NetCDF with a valid header OK == Testing etsf_io_low_read_dim()... == argument ncid: wrong value OK == == argument dimname: wrong value OK == == argument dimname: good value OK == Testing etsf_io_low_read_var_infos()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument varname: good value OK == == | checking type value OK == == | checking shape value OK == == | checking dimension values OK == == argument varname: with dim names OK == == | checking dim array association OK == == | checking dim array size OK == == | checking dim array names OK == == argument varname: with att names OK == == | checking att array association OK == == | checking att array size OK == == | checking att array names OK == Testing etsf_io_low_check_att()... == argument ncid: wrong value OK == == argument filename: no write access OK == == argument filename: creation, minimal header OK == == | opening test OK == == argument filename: creation, full header OK == == | opening test OK == == | reading title OK == == | value title OK == == | reading history OK == == | value history OK == Testing etsf_io_low_open_modify()... == argument filename: wrong filename OK == == argument filename: wrong file type OK == == argument filename: NetCDF without header OK == == argument filename: NetCDF without header modification OK == == argument filename: NetCDF with title creation OK == == | reading title OK == == | value title OK == == argument filename: NetCDF with title modification OK == == | reading title OK == == | value title OK == == argument filename: NetCDF with history creation OK == == | reading history OK == == | value history OK == == argument filename: NetCDF with history updating OK == == | reading history OK == == | value history OK == Testing etsf_io_low_write_dim()... == argument ncid: wrong value OK == == argument dimname: write a new value OK == == | reading dimension OK == == | checking value OK == == argument value: wrong negative value OK == == argument ncvarid: etsf_io_low_global_att value OK == == argument ncvarid: wrong value OK == == argument ncvarid: valid variable attribute (0D) OK == == argument ncvarid: valid variable attribute (1D) OK == == argument atttype: wrong type OK == == argument attlen: wrong dimension OK == == argument attlen: good value OK == Testing etsf_io_low_read_att()... == argument ncid: wrong value OK == == argument ncvarid: wrong value OK == == argument attname: wrong value OK == == argument att: wrong type OK == == argument att: good type (float) OK == == | cheking value OK == == argument att: good type (string) OK == == | cheking value OK == == argument varname: accessing variable through its name (float) OK == == | cheking value OK == == argument varname: accessing variable through its name (string) OK == == | cheking value OK == Testing etsf_io_low_read_flag()... == argument ncid: wrong value OK == == argument ncvarid: wrong value OK == == argument varname: accessing variable through its name (yes) OK == == | cheking value OK == == argument varname: accessing variable through its name (No) OK == == | cheking value OK == Testing etsf_io_low_check_var()... == field nctype: incompatible values OK == == field nctype: matching values OK == == field ncshape: uncompatible values OK == == field ncshape: compatible values OK == == field ncshape (nD): matching values OK == == block%count: incompatible values OK == == block%count: compatible values OK == == block%count: subpart compatible values OK == == block%start: incompatible values OK == == block%start: compatible values OK == == block%map: incompatible values OK == == block%map: compatible values OK == Testing etsf_io_low_read_var_integer()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (0D) OK == == argument var: good value (1D) OK == == argument var: good value (2D) OK == == argument var: wrong matching (2D <-> 1D) OK == == argument var: good matching (2D <-> 1D) OK == == argument start: wrong size OK == == argument count: wrong size OK == == argument map: wrong size OK == == argument start: out-of-bounds OK == == argument count: out-of-bounds OK == == argument var + count: wrong number of elements OK == == argument var + count: good match (sub part) OK == == argument var: transform shape (all reading) OK == == argument var + count: good match (all reading) OK == == argument start + count: two sub reading OK == == argument start + count: sub access with assumed dimensions OK == == argument map: exchanging dimensions OK == == argument var: generic pointer (1D) OK == == argument var: generic pointer (2D) OK == == argument var + count: generic pointer OK == Testing etsf_io_low_read_var_double()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (0D) OK == == argument var: good value (1D) OK == == argument var: good value (2D) OK == == argument var: wrong matching (2D <-> 1D) OK == == argument var: good matching (2D <-> 1D) OK == == argument var + sub: good matching (3D <-> 1D) OK == == argument var: generic pointer (1D) OK == == argument var + sub: generic pointer OK == Testing etsf_io_low_read_var_character()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (1D) OK == Testing etsf_io_low_read_all_var_infos()... == argument var_infos_array: allocated array OK == == argument ncid: wrong value OK == == read all variable descriptions OK == == - check number of variables OK == == - check variable name 'atom_species_names' OK == == - check variable 'atom_species_names' shape OK == == - check variable name 'atom_species' OK == == - check variable 'atom_species' shape OK == == - check variable name 'test_integer_2d' OK == == - check variable 'test_integer_2d' shape OK == == - check variable name 'test_integer_4d' OK == == - check variable 'test_integer_4d' shape OK == == argument dimname: overwriting (should fail) OK == == argument dimname: overwriting (same value) OK == == | reading dimension OK == == | checking value OK == Testing etsf_io_low_write_att_integer()... == argument ncid: wrong value OK == == argument att: good value (0D) OK == == | reading variable OK == == | checking values OK == == argument att: good value (1D) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_write_att_real()... == argument ncid: wrong value OK == == argument att: good value (0D) OK == == | reading variable OK == == | checking values OK == == argument att: good value (1D) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_write_att_double()... == argument ncid: wrong value OK == == - check variable name 'space_group' OK == == - check variable 'space_group' shape OK == == - check variable name 'test_double_0d' OK == == - check variable 'test_double_0d' shape OK == == - check variable name 'test_double_1d' OK == == - check variable 'test_double_1d' shape OK == == - check variable name 'reduced_atom_positions' OK == == - check variable 'reduced_atom_positions' shape OK == == - check variable name 'primitive_vectors' OK == == - check variable 'primitive_vectors' shape OK == == - check variable name 'density' OK == == - check variable 'density' shape OK == == argument att: good value (0D) OK == == | reading variable OK == == | checking values OK == == argument att: good value (1D) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_write_att_character()... == argument ncid: wrong value OK == == argument att: good value OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_def_var()... == argument ncid: wrong value OK == == single value: wrong type OK == == single value: adding a new variable OK == == single value: overwriting (should fail) OK == == single value: overwriting (matching definition) OK == == single value: read definition OK == == | check definition OK == == 1D array: wrong type OK == == 1D array: wrong dimension OK == == 1D array: adding a new variable OK == == 1D array: overwriting (should fail) OK == == 1D array: overwriting (matching definition) OK == == 1D array: read definition OK == == | check definition OK == == 2D array: adding a new variable OK == == string: adding a new variable OK == == string: read definition OK == == | check definition OK == == 2D array: adding a new variable OK == == 2D array: read definition OK == == | check definition OK == == 4D array: adding a new variable OK == Testing etsf_io_low_write_var_integer()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (0D) OK == == | reading variable OK == == | checking values OK == == argument var: good value (1D) OK == == | reading variable OK == == | checking values OK == == argument var: wrong matching (2D <-> 1D) OK == == argument var: good matching (2D <-> 1D) OK == == | reading variable OK == == | checking values OK == == argument sub: wrong size OK == == argument sub: out-of-bounds OK == == argument sub: wrong dimensions OK == == argument sub: good dimensions OK == == | reading variable OK == == | checking values OK == == argument var: generic pointer (1D) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_write_var_double()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (2D) OK == == | reading variable OK == == | checking values OK == == argument var: wrong matching (2D <-> 1D) OK == == argument var: good matching (2D <-> 1D) OK == == | reading variable OK == == | checking values OK == == argument var + sub: good matching (3D <-> 1D) OK == == | reading variable OK == == | checking values OK == == argument var: generic pointer (2D) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_write_var_character()... == argument ncid: wrong value OK == == argument varname: wrong value OK == == argument var: wrong type OK == == argument var: wrong dimensions OK == == argument var: good value (one string) OK == == | reading variable OK == == | checking values OK == Testing etsf_io_low_copy_all_att()... == argument ncid_from: wrong value OK == == argument ncid_to: wrong value OK == == argument ncvarid_from: wrong value OK == == argument ncvarid_to: wrong value OK == == global attribute: valid copy OK == == | reading title OK == == | value title OK == == global attribute to variable: valid copy OK == == | reading title OK == == | value title OK == == variable attribute to variable: valid copy OK == == | reading attribute OK == == | value units OK == \cp ./tests_run.sh run PASS: run ============================================================================ Testsuite summary for ETSF - IO library 1.0.4 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' make[3]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' Making check in tests/utils make[2]: Entering directory '/build/etsf-io-1.0.4/tests/utils' make check-TESTS make[3]: Entering directory '/build/etsf-io-1.0.4/tests/utils' make[4]: Entering directory '/build/etsf-io-1.0.4/tests/utils' echo "#!/bin/sh" > runSi; chmod u+x runSi echo "#!/bin/sh" > runRspc1; chmod u+x runRspc1 echo "#!/bin/sh" > runRspc2; chmod u+x runRspc2 echo "../../src/utils/etsf_io -a content ./si1002x1-o_DS1_DEN-etsf.nc | grep '^ - ' > si1002x1-o_DS1_DEN-etsf.log" >> runSi echo "../../src/utils/etsf_io -a content ./wfs_complex-etsf.nc | grep '^ - ' > wfs_complex-etsf.log" >> runRspc1 echo "../../src/utils/etsf_io -a content ./wfs_real-etsf.nc | grep '^ - ' > wfs_real-etsf.log" >> runRspc2 echo 'diff=`diff ./si1002x1-o_DS1_DEN-etsf.ref si1002x1-o_DS1_DEN-etsf.log`' >> runSi echo 'diff=`diff ./wfs_complex-etsf.ref wfs_complex-etsf.log`' >> runRspc1 echo 'diff=`diff ./wfs_real-etsf.ref wfs_real-etsf.log`' >> runRspc2 echo "if test -z \"\$diff\" ; then exit 0; else exit 1; fi" >> runSi echo "if test -z \"\$diff\" ; then exit 0; else exit 1; fi" >> runRspc1 echo "if test -z \"\$diff\" ; then exit 0; else exit 1; fi" >> runRspc2 PASS: runRspc1 PASS: runSi PASS: runRspc2 ============================================================================ Testsuite summary for ETSF - IO library 1.0.4 ============================================================================ # TOTAL: 3 # PASS: 3 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[4]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' make[3]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' Making check in doc/www make[2]: Entering directory '/build/etsf-io-1.0.4/doc/www' Making check in low_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/low_level' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/low_level' Making check in group_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/group_level' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/group_level' Making check in tutorials make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/tutorials' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/tutorials' Making check in utils make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Entering directory '/build/etsf-io-1.0.4' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/etsf-io-1.0.4' make[1]: Leaving directory '/build/etsf-io-1.0.4' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j3 install DESTDIR=/build/etsf-io-1.0.4/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/etsf-io-1.0.4' Making install in src/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/low_level' make[3]: Entering directory '/build/etsf-io-1.0.4/src/low_level' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/include' /usr/bin/install -c -m 644 libetsf_io_low_level.a '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /usr/bin/install -c -m 644 etsf_io_low_level.mod '/build/etsf-io-1.0.4/debian/tmp/usr/include' ( cd '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' && ranlib libetsf_io_low_level.a ) make[3]: Leaving directory '/build/etsf-io-1.0.4/src/low_level' make[2]: Leaving directory '/build/etsf-io-1.0.4/src/low_level' Making install in src/group_level make[2]: Entering directory '/build/etsf-io-1.0.4/src/group_level' make[3]: Entering directory '/build/etsf-io-1.0.4/src/group_level' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/include' /usr/bin/install -c -m 644 libetsf_io.a '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /usr/bin/install -c -m 644 etsf_io.mod '/build/etsf-io-1.0.4/debian/tmp/usr/include' ( cd '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' && ranlib libetsf_io.a ) make[3]: Leaving directory '/build/etsf-io-1.0.4/src/group_level' make[2]: Leaving directory '/build/etsf-io-1.0.4/src/group_level' Making install in src/utils make[2]: Entering directory '/build/etsf-io-1.0.4/src/utils' make[3]: Entering directory '/build/etsf-io-1.0.4/src/utils' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/bin' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/include' /usr/bin/install -c -m 644 libetsf_io_utils.a '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' /usr/bin/install -c -m 644 etsf_io_file.mod etsf_io_tools.mod '/build/etsf-io-1.0.4/debian/tmp/usr/include' /usr/bin/install -c etsf_io '/build/etsf-io-1.0.4/debian/tmp/usr/bin' ( cd '/build/etsf-io-1.0.4/debian/tmp/usr/lib/arm-linux-gnueabihf' && ranlib libetsf_io_utils.a ) make[3]: Leaving directory '/build/etsf-io-1.0.4/src/utils' make[2]: Leaving directory '/build/etsf-io-1.0.4/src/utils' Making install in tests/low_level make[2]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' make[3]: Entering directory '/build/etsf-io-1.0.4/tests/low_level' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/low_level' Making install in tests/utils make[2]: Entering directory '/build/etsf-io-1.0.4/tests/utils' make[3]: Entering directory '/build/etsf-io-1.0.4/tests/utils' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' make[2]: Leaving directory '/build/etsf-io-1.0.4/tests/utils' Making install in doc/www make[2]: Entering directory '/build/etsf-io-1.0.4/doc/www' Making install in low_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/low_level' make[4]: Entering directory '/build/etsf-io-1.0.4/doc/www/low_level' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/low_level' /usr/bin/install -c -m 644 etsf_io_low_level_f90.html public_variables_f90.html read_routines_f90.html write_routines_f90.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/low_level' make[4]: Leaving directory '/build/etsf-io-1.0.4/doc/www/low_level' make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/low_level' Making install in group_level make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/group_level' make[4]: Entering directory '/build/etsf-io-1.0.4/doc/www/group_level' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/group_level' /usr/bin/install -c -m 644 etsf_io_dims_def_f90.html etsf_io_dims_get_f90.html etsf_io_dims_merge_f90.html etsf_io_dims_trace_f90.html etsf_io_geometry_def_f90.html etsf_io_electrons_def_f90.html etsf_io_kpoints_def_f90.html etsf_io_basisdata_def_f90.html etsf_io_gwdata_def_f90.html etsf_io_dielectric_def_f90.html etsf_io_main_def_f90.html etsf_io_geometry_get_f90.html etsf_io_electrons_get_f90.html etsf_io_kpoints_get_f90.html etsf_io_basisdata_get_f90.html etsf_io_gwdata_get_f90.html etsf_io_dielectric_get_f90.html etsf_io_main_get_f90.html etsf_io_geometry_put_f90.html etsf_io_electrons_put_f90.html etsf_io_kpoints_put_f90.html etsf_io_basisdata_put_f90.html etsf_io_gwdata_put_f90.html etsf_io_dielectric_put_f90.html etsf_io_main_put_f90.html etsf_io_geometry_copy_f90.html etsf_io_electrons_copy_f90.html etsf_io_kpoints_copy_f90.html etsf_io_basisdata_copy_f90.html etsf_io_gwdata_copy_f90.html etsf_io_dielectric_copy_f90.html etsf_io_main_copy_f90.html etsf_io_split_init_f90.html etsf_io_split_allocate_f90.html etsf_io_split_free_f90.html etsf_io_split_def_f90.html etsf_io_split_get_f90.html etsf_io_split_put_f90.html etsf_io_split_copy_f90.html etsf_io_split_merge_f90.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/group_level' /usr/bin/install -c -m 644 etsf_io_vars_free_f90.html etsf_io_data_init_f90.html etsf_io_data_read_f90.html etsf_io_data_write_f90.html etsf_io_data_contents_f90.html etsf_io_data_get_f90.html etsf_io_data_copy_f90.html etsf_io_f90.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/group_level' make[4]: Leaving directory '/build/etsf-io-1.0.4/doc/www/group_level' make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/group_level' Making install in tutorials make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/tutorials' make[4]: Entering directory '/build/etsf-io-1.0.4/doc/www/tutorials' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/tutorials' /usr/bin/install -c -m 644 convert_to_xyz_f90.html create_a_crystal_den_file_f90.html index.html mix_ETSF_and_non_ETSF_f90.html MPI_output_of_a_density_f90.html read_a_file_f90.html README_f90.html read_write_sub_access_f90.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/tutorials' make[4]: Leaving directory '/build/etsf-io-1.0.4/doc/www/tutorials' make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/tutorials' Making install in utils make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www/utils' make[4]: Entering directory '/build/etsf-io-1.0.4/doc/www/utils' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/utils' /usr/bin/install -c -m 644 binary.html etsf_io_file_check_dielectric_function_data_f90.html etsf_io_file_check_wavefunctions_data_f90.html etsf_io_file_check_scalar_field_data_f90.html etsf_io_file_check_crystallographic_data_f90.html etsf_io_file_contents_f90.html etsf_io_file_f90.html etsf_io_file_public_f90.html etsf_io_tools_f90.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc/utils' make[4]: Leaving directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www/utils' make[3]: Entering directory '/build/etsf-io-1.0.4/doc/www' make[4]: Entering directory '/build/etsf-io-1.0.4/doc/www' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc' /usr/bin/install -c -m 644 index.html masterindex.html robo_definitions.html robodoc.css robo_functions.html robo_methods.html robo_modules.html robo_sourcefiles.html robo_strutures.html robo_sub_cat.html robo_tuto_cat.html toc_index.html '/build/etsf-io-1.0.4/debian/tmp/usr/share/doc/libetsf-io-doc' make[4]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[3]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Leaving directory '/build/etsf-io-1.0.4/doc/www' make[2]: Entering directory '/build/etsf-io-1.0.4' make[3]: Entering directory '/build/etsf-io-1.0.4' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/etsf-io-1.0.4/debian/tmp/usr/share/man/man1' /usr/bin/install -c -m 644 doc/etsf_io.1 '/build/etsf-io-1.0.4/debian/tmp/usr/share/man/man1' make[3]: Leaving directory '/build/etsf-io-1.0.4' make[2]: Leaving directory '/build/etsf-io-1.0.4' make[1]: Leaving directory '/build/etsf-io-1.0.4' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package libetsf-io-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libetsf-io-doc' in '../libetsf-io-doc_1.0.4-5_all.deb'. dpkg-deb: building package 'etsf-io' in '../etsf-io_1.0.4-5_armhf.deb'. dpkg-deb: building package 'etsf-io-dbgsym' in '../etsf-io-dbgsym_1.0.4-5_armhf.deb'. dpkg-deb: building package 'libetsf-io-dev' in '../libetsf-io-dev_1.0.4-5_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../etsf-io_1.0.4-5_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/10369 and its subdirectories I: Current time: Mon Jul 12 05:29:18 -12 2021 I: pbuilder-time-stamp: 1626110958