I: pbuilder: network access will be disabled during build I: Current time: Tue Jan 9 15:45:24 -12 2024 I: pbuilder-time-stamp: 1704858324 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [macs_2.2.7.1-3.dsc] I: copying [./macs_2.2.7.1.orig.tar.gz] I: copying [./macs_2.2.7.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.JZyxEmfS/trustedkeys.kbx': General error gpgv: Signature made Wed Jul 15 21:48:48 2020 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./macs_2.2.7.1-3.dsc dpkg-source: info: extracting macs in macs-2.2.7.1 dpkg-source: info: unpacking macs_2.2.7.1.orig.tar.gz dpkg-source: info: unpacking macs_2.2.7.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying keep_debug dpkg-source: info: applying link-libm.patch dpkg-source: info: applying no-pip.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30789/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='8a1e75031bb84dd8aac0500cf12f2b37' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30789' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.cE3Pa8tn/pbuilderrc_vskE --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.cE3Pa8tn/b1 --logfile b1/build.log macs_2.2.7.1-3.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:3142/' I: uname -a Linux jtx1c 5.10.0-26-arm64 #1 SMP Debian 5.10.197-1 (2023-09-29) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Mar 27 2022 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 7 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 7 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Jan 25 2023 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Jan 25 2023 fgrep -rwxr-xr-x 1 root root 47492 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 124508 Jan 25 2023 grep -rwxr-xr-x 2 root root 2346 Apr 10 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 10 2022 gzexe -rwxr-xr-x 1 root root 64212 Apr 10 2022 gzip -rwxr-xr-x 1 root root 13784 Nov 7 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jan 20 2022 more -rwsr-xr-x 1 root root 34400 Jan 20 2022 mount -rwxr-xr-x 1 root root 9824 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 7 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jan 7 09:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jan 20 2022 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 17 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jan 20 2022 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Apr 10 2022 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 7 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 10 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 10 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 10 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 10 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 10 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 10 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 10 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 10 2022 zless -rwxr-xr-x 1 root root 1842 Apr 10 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 10 2022 znew I: user script /srv/workspace/pbuilder/30789/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, cython3, help2man, procps dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 17486 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on procps; however: Package procps is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu67{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libncurses6{a} libpipeline1{a} libprocps8{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} openssl{a} po-debconf{a} procps{a} python-pip-whl{a} python3{a} python3-all{a} python3-all-dev{a} python3-attr{a} python3-dev{a} python3-distutils{a} python3-importlib-metadata{a} python3-iniconfig{a} python3-lib2to3{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pip{a} python3-pkg-resources{a} python3-pluggy{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-setuptools{a} python3-six{a} python3-toml{a} python3-wheel{a} python3-zipp{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl lynx psmisc python3-pygments wget 0 packages upgraded, 89 newly installed, 0 to remove and 0 not upgraded. Need to get 40.9 MB of archives. After unpacking 144 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8+deb11u1 [139 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf liblocale-gettext-perl armhf 1.07-4+b1 [18.3 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2+deb11u5 [78.4 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf tzdata all 2021a-1+deb11u10 [286 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libncurses6 armhf 6.2+20201114-2+deb11u2 [80.6 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libprocps8 armhf 2:3.3.17-5 [60.7 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf procps armhf 2:3.3.17-5 [492 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf openssl armhf 1.1.1w-0+deb11u1 [835 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf ca-certificates all 20210119 [158 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3+deb11u1 [273 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3+deb11u1 [120 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3+deb11u1 [68.2 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf cython3 armhf 0.29.21-3+b1 [1250 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7+deb11u4 [602 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf python3-distutils all 3.9.2-1 [143 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf dh-python all 4.20201102+nmu1 [99.4 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf help2man armhf 1.48.1 [190 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libblas3 armhf 3.9.0-3+deb11u1 [109 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2+deb11u5 [126 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf libgfortran5 armhf 10.2.1-6 [237 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf liblapack3 armhf 3.9.0-3+deb11u1 [1652 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libpython3.9 armhf 3.9.2-1 [1447 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libpython3.9-dev armhf 3.9.2-1 [3160 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libpython3-dev armhf 3.9.2-3 [21.7 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libpython3-all-dev armhf 3.9.2-3 [1068 B] Get: 67 http://deb.debian.org/debian bullseye/main armhf python-pip-whl all 20.3.4-4+deb11u1 [1948 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf python3-all armhf 3.9.2-3 [1056 B] Get: 69 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2+deb11u2 [185 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf python3.9-dev armhf 3.9.2-1 [515 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf python3-dev armhf 3.9.2-3 [24.8 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf python3-all-dev armhf 3.9.2-3 [1064 B] Get: 73 http://deb.debian.org/debian bullseye/main armhf python3-attr all 20.3.0-1 [52.9 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf python3-six all 1.16.0-2 [17.5 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf python3-more-itertools all 4.2.0-3 [42.7 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf python3-zipp all 1.0.0-3 [6060 B] Get: 77 http://deb.debian.org/debian bullseye/main armhf python3-importlib-metadata all 1.6.0-2 [10.3 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf python3-iniconfig all 1.1.1-1 [6308 B] Get: 79 http://deb.debian.org/debian bullseye/main armhf python3-pkg-resources all 52.0.0-4 [190 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf python3-numpy armhf 1:1.19.5-1 [2981 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf python3-pyparsing all 2.4.7-1 [109 kB] Get: 82 http://deb.debian.org/debian bullseye/main armhf python3-packaging all 20.9-2 [33.5 kB] Get: 83 http://deb.debian.org/debian bullseye/main armhf python3-setuptools all 52.0.0-4 [366 kB] Get: 84 http://deb.debian.org/debian bullseye/main armhf python3-wheel all 0.34.2-1 [24.0 kB] Get: 85 http://deb.debian.org/debian bullseye/main armhf python3-pip all 20.3.4-4+deb11u1 [337 kB] Get: 86 http://deb.debian.org/debian bullseye/main armhf python3-pluggy all 0.13.0-6 [22.3 kB] Get: 87 http://deb.debian.org/debian bullseye/main armhf python3-py all 1.10.0-1 [94.2 kB] Get: 88 http://deb.debian.org/debian bullseye/main armhf python3-toml all 0.10.1-1 [15.9 kB] Get: 89 http://deb.debian.org/debian bullseye/main armhf python3-pytest all 6.0.2-2 [211 kB] Fetched 40.9 MB in 4s (11.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 17486 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8+deb11u1_armhf.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../1-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. 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Current default time zone: 'Etc/UTC' Local time is now: Wed Jan 10 03:46:53 UTC 2024. Universal Time is now: Wed Jan 10 03:46:53 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:armhf (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode Setting up libexpat1-dev:armhf (2.2.10-2+deb11u5) ... Setting up libncurses6:armhf (6.2+20201114-2+deb11u2) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libgfortran5:armhf (10.2.1-6) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2+deb11u2) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up libmpdec3:armhf (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up openssl (1.1.1w-0+deb11u1) ... Setting up libelf1:armhf (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7+deb11u4) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libprocps8:armhf (2:3.3.17-5) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up liblapack3:armhf (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:armhf (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.48.1) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libjs-sphinxdoc (3.4.3-2) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up python-pip-whl (20.3.4-4+deb11u1) ... Setting up libpython3.9-stdlib:armhf (3.9.2-1) ... Setting up libpython3-stdlib:armhf (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libpython3.9:armhf (3.9.2-1) ... Setting up python3.9 (3.9.2-1) ... Setting up libpython3.9-dev:armhf (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-wheel (0.34.2-1) ... Setting up python3-six (1.16.0-2) ... Setting up python3-pyparsing (2.4.7-1) ... Setting up cython3 (0.29.21-3+b1) ... Setting up python3-toml (0.10.1-1) ... Setting up python3.9-dev (3.9.2-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-4) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up python3-more-itertools (4.2.0-3) ... Setting up python3-iniconfig (1.1.1-1) ... Setting up python3-attr (20.3.0-1) ... Setting up libpython3-dev:armhf (3.9.2-3) ... Setting up python3-setuptools (52.0.0-4) ... Setting up python3-py (1.10.0-1) ... Setting up python3-all (3.9.2-3) ... Setting up python3-zipp (1.0.0-3) ... Setting up python3-packaging (20.9-2) ... Setting up libpython3-all-dev:armhf (3.9.2-3) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-pip (20.3.4-4+deb11u1) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-all-dev (3.9.2-3) ... Setting up python3-importlib-metadata (1.6.0-2) ... Setting up python3-pluggy (0.13.0-6) ... Setting up python3-pytest (6.0.2-2) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/macs-2.2.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../macs_2.2.7.1-3_source.changes dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 2.2.7.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --with python3 --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/macs-2.2.7.1' dh_auto_clean || true I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build' (and everything under it) 'build/bdist.linux-armhf' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -Rf test/macs2.2.7.1-3* test/speedtest* rm -f debian/*.1 debian/*-man-include make[1]: Leaving directory '/build/reproducible-path/macs-2.2.7.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/macs-2.2.7.1' for pyx in $(find MACS2/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/bdgdiff_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/OutputWriter.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/diffpeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/callpeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/filterdup_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/bdgbroadcall_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/bdgpeakcall_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/Constants.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/bdgcmp_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/cmbreps_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/randsample_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/pileup_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/bdgopt_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/refinepeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/__init__.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/predictd_cmd.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/OptValidator.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 creating /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO copying MACS2/IO/__init__.py -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO copying MACS2/cPosValCalculation.pxd -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 copying MACS2/khash.pxd -> /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2 running build_ext cythoning MACS2/Prob.pyx to MACS2/Prob.c cythoning MACS2/IO/Parser.pyx to MACS2/IO/Parser.c cythoning MACS2/Pileup.pyx to MACS2/Pileup.c cythoning MACS2/PeakModel.pyx to MACS2/PeakModel.c cythoning MACS2/PeakDetect.pyx to MACS2/PeakDetect.c cythoning MACS2/Signal.pyx to MACS2/Signal.c cythoning MACS2/IO/PeakIO.pyx to MACS2/IO/PeakIO.c cythoning MACS2/IO/BedGraphIO.pyx to MACS2/IO/BedGraphIO.c cythoning MACS2/IO/FixWidthTrack.pyx to MACS2/IO/FixWidthTrack.c cythoning MACS2/IO/PairedEndTrack.pyx to MACS2/IO/PairedEndTrack.c cythoning MACS2/IO/BedGraph.pyx to MACS2/IO/BedGraph.c cythoning MACS2/IO/ScoreTrack.pyx to MACS2/IO/ScoreTrack.c cythoning MACS2/IO/CallPeakUnit.pyx to MACS2/IO/CallPeakUnit.c building 'MACS2.Prob' extension creating build creating build/temp.linux-armhf-3.9 creating build/temp.linux-armhf-3.9/MACS2 arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Prob.c -o build/temp.linux-armhf-3.9/MACS2/Prob.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Prob.o -lm -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Prob.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.Parser' extension creating build/temp.linux-armhf-3.9/MACS2/IO arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/Parser.c -o build/temp.linux-armhf-3.9/MACS2/IO/Parser.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/Parser.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/Parser.cpython-39-arm-linux-gnueabihf.so building 'MACS2.Pileup' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Pileup.c -o build/temp.linux-armhf-3.9/MACS2/Pileup.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/cPosValCalculation.c -o build/temp.linux-armhf-3.9/MACS2/cPosValCalculation.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Pileup.o build/temp.linux-armhf-3.9/MACS2/cPosValCalculation.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Pileup.cpython-39-arm-linux-gnueabihf.so building 'MACS2.PeakModel' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/PeakModel.c -o build/temp.linux-armhf-3.9/MACS2/PeakModel.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/PeakModel.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakModel.cpython-39-arm-linux-gnueabihf.so building 'MACS2.PeakDetect' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/PeakDetect.c -o build/temp.linux-armhf-3.9/MACS2/PeakDetect.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/PeakDetect.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakDetect.cpython-39-arm-linux-gnueabihf.so building 'MACS2.Signal' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/Signal.c -o build/temp.linux-armhf-3.9/MACS2/Signal.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/Signal.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Signal.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.PeakIO' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/PeakIO.c -o build/temp.linux-armhf-3.9/MACS2/IO/PeakIO.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/PeakIO.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PeakIO.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.BedGraphIO' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/BedGraphIO.c -o build/temp.linux-armhf-3.9/MACS2/IO/BedGraphIO.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/BedGraphIO.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraphIO.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.FixWidthTrack' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/FixWidthTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/FixWidthTrack.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/FixWidthTrack.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/FixWidthTrack.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.PairedEndTrack' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/PairedEndTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/PairedEndTrack.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/PairedEndTrack.o -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PairedEndTrack.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.BedGraph' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c MACS2/IO/BedGraph.c -o build/temp.linux-armhf-3.9/MACS2/IO/BedGraph.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/BedGraph.o -lm -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraph.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.ScoreTrack' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/ScoreTrack.c -o build/temp.linux-armhf-3.9/MACS2/IO/ScoreTrack.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/ScoreTrack.o -lm -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/ScoreTrack.cpython-39-arm-linux-gnueabihf.so building 'MACS2.IO.CallPeakUnit' extension arm-linux-gnueabihf-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-jS0VHk/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.9 -c MACS2/IO/CallPeakUnit.c -o build/temp.linux-armhf-3.9/MACS2/IO/CallPeakUnit.o -w -O3 -ffast-math arm-linux-gnueabihf-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -fdebug-prefix-map=/build/reproducible-path/macs-2.2.7.1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armhf-3.9/MACS2/IO/CallPeakUnit.o -lm -o /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/CallPeakUnit.cpython-39-arm-linux-gnueabihf.so running build_scripts creating build/scripts-3.9 copying and adjusting bin/macs2 -> build/scripts-3.9 changing mode of build/scripts-3.9/macs2 from 644 to 755 PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \ --no-discard-stderr --no-info \ --name "macs2 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs2" > debian/macs2.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmacs2_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs2_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS2/build/ help2man \ --no-discard-stderr --no-info --version-string="2.2.7.1" \ --include debian/macs2_${subcommand}-man-include \ "python3 bin/macs2 ${subcommand}" > \ debian/macs2_${subcommand}.1; done make[1]: Leaving directory '/build/reproducible-path/macs-2.2.7.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/macs-2.2.7.1' dh_auto_test I: pybuild base:232: cd /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build; python3.9 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.9.2, pytest-6.0.2, py-1.10.0, pluggy-0.13.0 rootdir: /build/reproducible-path/macs-2.2.7.1 collected 42 items test/test_BedGraph.py .... [ 9%] test/test_FixWidthTrack.py .... [ 19%] test/test_PairedEndTrack.py .... [ 28%] test/test_Parser.py ... [ 35%] test/test_PeakIO.py ... [ 42%] test/test_Pileup.py .. [ 47%] test/test_Prob.py ................ [ 85%] test/test_ScoreTrack.py .... [ 95%] test/test_Signal.py s. [100%] ======================== 41 passed, 1 skipped in 5.64s ========================= cd test && for PY3VER in 3.9; do \ export PATH=/build/reproducible-path/macs-2.2.7.1/build/scripts-${PY3VER}:$PATH \ && export PYTHONPATH=/build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_${PY3VER}_MACS2/build \ && ./cmdlinetest macs2.2.7.1-3-${PY3VER} ; done 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. 50k contigs with buffersize 13.1 callpeak 13.2 filterdup 13.3 pileup 13.4 randsample 14. search for errors or warnings in log files checking macs2.2.7.1-3-3.9_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking macs2.2.7.1-3-3.9_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking macs2.2.7.1-3-3.9_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking macs2.2.7.1-3-3.9_run_50kcontigs/run_randsample.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgcmp/run_bdgcmp.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgopt/run_bdgopt_max.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgopt/run_bdgopt_min.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking macs2.2.7.1-3-3.9_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking macs2.2.7.1-3-3.9_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking macs2.2.7.1-3-3.9_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking macs2.2.7.1-3-3.9_run_cmbreps/run_cmbreps_max.log... ... clear! checking macs2.2.7.1-3-3.9_run_cmbreps/run_cmbreps_mean.log... ... clear! checking macs2.2.7.1-3-3.9_run_filterdup/run_filterdup.log... ... clear! checking macs2.2.7.1-3-3.9_run_filterdup/run_filterdup_d.log... ... clear! checking macs2.2.7.1-3-3.9_run_filterdup/run_filterdup_pe.log... ... clear! checking macs2.2.7.1-3-3.9_run_filterdup/run_filterdup_pe_d.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking macs2.2.7.1-3-3.9_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking macs2.2.7.1-3-3.9_run_predictd/run_predictd.log... ... clear! checking macs2.2.7.1-3-3.9_run_randsample/run_randsample.log... ... clear! checking macs2.2.7.1-3-3.9_run_randsample/run_randsample_bampe.log... ... clear! checking macs2.2.7.1-3-3.9_run_randsample/run_randsample_bedpe.log... ... clear! checking macs2.2.7.1-3-3.9_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking macs2.2.7.1-3-3.9_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 15. compare with standard outputs 14.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... ... success! 14.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... ... success! 14.1.3 checking 50kcontigs run_filterdup_result.bed ... ... success! 14.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... ... success! 14.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... ... success! 14.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... ... success! 14.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... ... success! 14.4.1 checking bdgdiff common.bed ... ... success! 14.4.2 checking bdgdiff cond1.bed ... ... success! 14.4.3 checking bdgdiff cond2.bed ... ... success! 14.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... ... success! 14.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... ... success! 14.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... ... success! 14.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... ... success! 14.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... ... success! 14.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... ... success! 14.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... ... success! 14.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... ... success! 14.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... ... success! 14.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... ... success! 14.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... ... success! 14.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... ... success! 14.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... ... success! 14.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... ... success! 14.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... ... success! 14.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... ... success! 14.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... ... success! 14.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... ... success! 14.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... ... success! 14.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... ... success! 14.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... ... success! 14.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... ... success! 14.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... ... success! 14.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... ... success! 14.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... ... success! 14.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... ... success! 14.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... ... success! 14.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... ... success! 14.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... ... success! 14.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... ... success! 14.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... ... success! 14.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... ... success! 14.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... ... success! 14.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... ... success! 14.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... ... success! 14.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... ... success! 14.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... ... success! 14.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... ... success! 14.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... ... success! 14.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... ... success! 14.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... ... success! 14.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... ... success! 14.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... ... success! 14.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... ... success! 14.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... ... success! 14.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... ... success! 14.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... ... success! 14.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... ... success! 14.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... ... success! 14.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... ... success! 14.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... ... success! 14.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... ... success! 14.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... ... success! 14.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... ... success! 14.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... ... success! 14.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... ... success! 14.11.1 checking cmbreps run_cmbreps_fisher.bdg ... ... success! 14.11.2 checking cmbreps run_cmbreps_max.bdg ... ... success! 14.11.3 checking cmbreps run_cmbreps_mean.bdg ... ... success! 14.12.1 checking filterdup run_filterdup_result.bed ... ... success! 14.12.2 checking filterdup run_filterdup_result_pe.bedpe ... ... success! 14.13.1 checking pileup run_pileup_CTRL.bed.bdg ... ... success! 14.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... ... success! 14.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... ... success! 14.13.4 checking pileup run_pileup_ChIP.bed.bdg ... ... success! 14.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... ... success! 14.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... ... success! 14.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... ... success! 14.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... ... success! 14.15.1 checking bdgopt run_bdgopt_max.bdg ... ... success! 14.15.2 checking bdgopt run_bdgopt_min.bdg ... ... success! 16. brief speed test CPU time (mm:ss): 00:02:34 Max mem (KB): 177076 make[1]: Leaving directory '/build/reproducible-path/macs-2.2.7.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/reproducible-path/macs-2.2.7.1/debian/macs running install running build running build_py running build_ext skipping 'MACS2/Prob.c' Cython extension (up-to-date) skipping 'MACS2/IO/Parser.c' Cython extension (up-to-date) skipping 'MACS2/Pileup.c' Cython extension (up-to-date) skipping 'MACS2/PeakModel.c' Cython extension (up-to-date) skipping 'MACS2/PeakDetect.c' Cython extension (up-to-date) skipping 'MACS2/Signal.c' Cython extension (up-to-date) skipping 'MACS2/IO/PeakIO.c' Cython extension (up-to-date) skipping 'MACS2/IO/BedGraphIO.c' Cython extension (up-to-date) skipping 'MACS2/IO/FixWidthTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/PairedEndTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/BedGraph.c' Cython extension (up-to-date) skipping 'MACS2/IO/ScoreTrack.c' Cython extension (up-to-date) skipping 'MACS2/IO/CallPeakUnit.c' Cython extension (up-to-date) running build_scripts running install_lib creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9 creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgdiff_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/OutputWriter.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/filterdup_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgcmp_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/refinepeak_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/OutputWriter.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgdiff_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/pileup_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgopt_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/Constants.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/cmbreps_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/randsample_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgpeakcall_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/OptValidator.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/predictd_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/callpeak_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__pycache__/bdgbroadcall_cmd.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/diffpeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Prob.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/cPosValCalculation.pxd -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/callpeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/filterdup_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgbroadcall_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgpeakcall_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Pileup.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Constants.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/khash.pxd -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgcmp_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/cmbreps_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/randsample_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/pileup_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/bdgopt_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/refinepeak_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/__pycache__/__init__.cpython-39.pyc -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__pycache__ copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraphIO.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/BedGraph.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PairedEndTrack.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/FixWidthTrack.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/CallPeakUnit.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/__init__.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/Parser.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/ScoreTrack.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/IO/PeakIO.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakDetect.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/__init__.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/predictd_cmd.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/OptValidator.py -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/Signal.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 copying /build/reproducible-path/macs-2.2.7.1/.pybuild/cpython3_3.9_MACS2/build/MACS2/PeakModel.cpython-39-arm-linux-gnueabihf.so -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2 byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgdiff_cmd.py to bdgdiff_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/OutputWriter.py to OutputWriter.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/diffpeak_cmd.py to diffpeak_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/callpeak_cmd.py to callpeak_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/filterdup_cmd.py to filterdup_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgbroadcall_cmd.py to bdgbroadcall_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgpeakcall_cmd.py to bdgpeakcall_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/Constants.py to Constants.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgcmp_cmd.py to bdgcmp_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/cmbreps_cmd.py to cmbreps_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/randsample_cmd.py to randsample_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/pileup_cmd.py to pileup_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/bdgopt_cmd.py to bdgopt_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/refinepeak_cmd.py to refinepeak_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/IO/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/__init__.py to __init__.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/predictd_cmd.py to predictd_cmd.cpython-39.pyc byte-compiling /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2/OptValidator.py to OptValidator.cpython-39.pyc running install_egg_info running egg_info creating MACS2.egg-info writing MACS2.egg-info/PKG-INFO writing dependency_links to MACS2.egg-info/dependency_links.txt writing requirements to MACS2.egg-info/requires.txt writing top-level names to MACS2.egg-info/top_level.txt writing manifest file 'MACS2.egg-info/SOURCES.txt' reading manifest file 'MACS2.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching '.gitignore' warning: no previously-included files found matching '.travis.yml' no previously-included directories found matching '.github' no previously-included directories found matching 'DOCKER' writing manifest file 'MACS2.egg-info/SOURCES.txt' Copying MACS2.egg-info to /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/lib/python3.9/dist-packages/MACS2-2.2.7.1.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/bin copying build/scripts-3.9/macs2 -> /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/bin changing mode of /build/reproducible-path/macs-2.2.7.1/debian/macs/usr/bin/macs2 to 755 dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package macs: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_2.2.7.1-3_armhf.deb'. dpkg-deb: building package 'macs' in '../macs_2.2.7.1-3_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../macs_2.2.7.1-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from macs-2.2.7.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30789 and its subdirectories I: Current time: Tue Jan 9 16:13:55 -12 2024 I: pbuilder-time-stamp: 1704860035