I: pbuilder: network access will be disabled during build
I: Current time: Sat Aug 14 03:53:07 -12 2021
I: pbuilder-time-stamp: 1628956387
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [objcryst-fox_1.9.6.0-2.2.dsc]
I: copying [./objcryst-fox_1.9.6.0.orig.tar.bz2]
I: copying [./objcryst-fox_1.9.6.0-2.2.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.cvWWRJ2i/trustedkeys.kbx': General error
gpgv: Signature made Wed May 6 11:50:25 2020 -12
gpgv: using RSA key 6E7434F5897D43B17FCD57B753D5BC64B52378A2
gpgv: issuer "swt@techie.net"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./objcryst-fox_1.9.6.0-2.2.dsc
dpkg-source: info: extracting objcryst-fox in objcryst-fox-1.9.6.0
dpkg-source: info: unpacking objcryst-fox_1.9.6.0.orig.tar.bz2
dpkg-source: info: unpacking objcryst-fox_1.9.6.0-2.2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying install-in-build-directory
dpkg-source: info: applying revert-march-flag
dpkg-source: info: applying wx3.0-compat.patch
dpkg-source: info: applying cpp98.patch
I: using fakeroot in build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1673/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='armhf'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3'
DISTRIBUTION=''
HOME='/root'
HOST_ARCH='armhf'
IFS='
'
INVOCATION_ID='835f9b75e6c94e9490406602c2bd98dd'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='1673'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.Fx9XxsJQBJ/pbuilderrc_eeWL --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.Fx9XxsJQBJ/b1 --logfile b1/build.log objcryst-fox_1.9.6.0-2.2.dsc'
SUDO_GID='113'
SUDO_UID='107'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://10.0.0.15:8000/'
I: uname -a
Linux virt32c 5.10.0-8-armmp-lpae #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux
I: ls -l /bin
total 3580
-rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash
-rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2
-rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat
lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff
lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe
lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep
-rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2
-rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover
lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore
-rwxr-xr-x 1 root root 26668 Sep 22 2020 cat
-rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp
-rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod
-rwxr-xr-x 1 root root 43112 Sep 22 2020 chown
-rwxr-xr-x 1 root root 92616 Sep 22 2020 cp
-rwxr-xr-x 1 root root 75524 Dec 10 2020 dash
-rwxr-xr-x 1 root root 75880 Sep 22 2020 date
-rwxr-xr-x 1 root root 55436 Sep 22 2020 dd
-rwxr-xr-x 1 root root 59912 Sep 22 2020 df
-rwxr-xr-x 1 root root 96764 Sep 22 2020 dir
-rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg
lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname
-rwxr-xr-x 1 root root 22508 Sep 22 2020 echo
-rwxr-xr-x 1 root root 28 Nov 9 2020 egrep
-rwxr-xr-x 1 root root 22496 Sep 22 2020 false
-rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep
-rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt
-rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount
-rwxr-xr-x 1 root root 124508 Nov 9 2020 grep
-rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip
-rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe
-rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip
-rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname
-rwxr-xr-x 1 root root 43180 Sep 22 2020 ln
-rwxr-xr-x 1 root root 35068 Feb 7 2020 login
-rwxr-xr-x 1 root root 96764 Sep 22 2020 ls
-rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk
-rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir
-rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod
-rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp
-rwxr-xr-x 1 root root 34408 Jul 28 07:09 more
-rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount
-rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint
-rwxr-xr-x 1 root root 88524 Sep 22 2020 mv
lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd
lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash
-rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink
-rwxr-xr-x 1 root root 43104 Sep 22 2020 rm
-rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir
-rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts
-rwxr-xr-x 1 root root 76012 Dec 22 2018 sed
lrwxrwxrwx 1 root root 4 Aug 13 21:24 sh -> dash
-rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep
-rwxr-xr-x 1 root root 55360 Sep 22 2020 stty
-rwsr-xr-x 1 root root 46704 Jul 28 07:09 su
-rwxr-xr-x 1 root root 22532 Sep 22 2020 sync
-rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar
-rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile
-rwxr-xr-x 1 root root 67696 Sep 22 2020 touch
-rwxr-xr-x 1 root root 22496 Sep 22 2020 true
-rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server
-rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount
-rwxr-xr-x 1 root root 22520 Sep 22 2020 uname
-rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress
-rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir
-rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl
lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat
-rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp
-rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff
-rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep
-rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep
-rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce
-rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep
-rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless
-rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore
-rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew
I: user script /srv/workspace/pbuilder/1673/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: armhf
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper (>= 7), bzip2, libwxgtk3.0-gtk3-dev, freeglut3-dev, libfftw3-dev, libnewmat10-dev
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19398 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper (>= 7); however:
Package debhelper is not installed.
pbuilder-satisfydepends-dummy depends on libwxgtk3.0-gtk3-dev; however:
Package libwxgtk3.0-gtk3-dev is not installed.
pbuilder-satisfydepends-dummy depends on freeglut3-dev; however:
Package freeglut3-dev is not installed.
pbuilder-satisfydepends-dummy depends on libfftw3-dev; however:
Package libfftw3-dev is not installed.
pbuilder-satisfydepends-dummy depends on libnewmat10-dev; however:
Package libnewmat10-dev is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
adwaita-icon-theme{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} dbus{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dmsetup{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} freeglut3{a} freeglut3-dev{a} gettext{a} gettext-base{a} glib-networking{a} glib-networking-common{a} glib-networking-services{a} groff-base{a} gsettings-desktop-schemas{a} gtk-update-icon-cache{a} hicolor-icon-theme{a} intltool-debian{a} libapparmor1{a} libarchive-zip-perl{a} libargon2-1{a} libatk-bridge2.0-0{a} libatk1.0-0{a} libatk1.0-data{a} libatspi2.0-0{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbrotli1{a} libbsd0{a} libcairo-gobject2{a} libcairo2{a} libcap2{a} libcolord2{a} libcryptsetup12{a} libcups2{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate0{a} libdevmapper1.02.1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libelf1{a} libepoxy0{a} libexpat1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf-xlib-2.0-0{a} libgdk-pixbuf2.0-0{a} libgdk-pixbuf2.0-common{a} libgl-dev{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgtk-3-0{a} libgtk-3-common{a} libharfbuzz0b{a} libice-dev{a} libice6{a} libicu67{a} libip4tc2{a} libjbig0{a} libjpeg62-turbo{a} libjson-c5{a} libjson-glib-1.0-0{a} libjson-glib-1.0-common{a} libkmod2{a} liblcms2-2{a} libllvm11{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libnewmat10-dev{a} libnewmat10ldbl{a} libnotify4{a} libopengl-dev{a} libopengl0{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libproxy1v5{a} libpsl5{a} libpthread-stubs0-dev{a} librest-0.7-0{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsoup-gnome2.4-1{a} libsoup2.4-1{a} libsub-override-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libvulkan1{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp6{a} libwxbase3.0-0v5{a} libwxbase3.0-dev{a} libwxgtk3.0-gtk3-0v5{a} libwxgtk3.0-gtk3-dev{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-render0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxi6{a} libxinerama1{a} libxkbcommon0{a} libxml2{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxt-dev{a} libxt6{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} shared-mime-info{a} systemd{a} systemd-sysv{a} systemd-timesyncd{a} ucf{a} wx-common{a} wx3.0-headers{a} x11-common{a} x11proto-dev{a} x11proto-xext-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
at-spi2-core awesome cinnamon curl dunst gnome-flashback gnome-shell libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data libgtk-3-bin libltdl-dev libmail-sendmail-perl libnss-systemd librsvg2-common lxqt-notificationd lynx mate-notification-daemon mesa-vulkan-drivers notification-daemon notify-osd phosh plasma-workspace publicsuffix python3-jarabe wget xdg-user-dirs xfce4-notifyd zip
0 packages upgraded, 206 newly installed, 0 to remove and 0 not upgraded.
Need to get 97.7 MB of archives. After unpacking 336 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bullseye/main armhf libapparmor1 armhf 2.13.6-10 [94.5 kB]
Get: 2 http://deb.debian.org/debian bullseye/main armhf libcap2 armhf 1:2.44-1 [21.2 kB]
Get: 3 http://deb.debian.org/debian bullseye/main armhf libargon2-1 armhf 0~20171227-0.2 [20.4 kB]
Get: 4 http://deb.debian.org/debian bullseye/main armhf dmsetup armhf 2:1.02.175-2.1 [92.1 kB]
Get: 5 http://deb.debian.org/debian bullseye/main armhf libdevmapper1.02.1 armhf 2:1.02.175-2.1 [135 kB]
Get: 6 http://deb.debian.org/debian bullseye/main armhf libjson-c5 armhf 0.15-2 [39.0 kB]
Get: 7 http://deb.debian.org/debian bullseye/main armhf libcryptsetup12 armhf 2:2.3.5-1 [223 kB]
Get: 8 http://deb.debian.org/debian bullseye/main armhf libip4tc2 armhf 1.8.7-1 [32.6 kB]
Get: 9 http://deb.debian.org/debian bullseye/main armhf libkmod2 armhf 28-1 [48.5 kB]
Get: 10 http://deb.debian.org/debian bullseye/main armhf systemd-timesyncd armhf 247.3-6 [130 kB]
Get: 11 http://deb.debian.org/debian bullseye/main armhf systemd armhf 247.3-6 [4298 kB]
Get: 12 http://deb.debian.org/debian bullseye/main armhf systemd-sysv armhf 247.3-6 [113 kB]
Get: 13 http://deb.debian.org/debian bullseye/main armhf libdbus-1-3 armhf 1.12.20-2 [196 kB]
Get: 14 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB]
Get: 15 http://deb.debian.org/debian bullseye/main armhf dbus armhf 1.12.20-2 [222 kB]
Get: 16 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB]
Get: 17 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get: 18 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB]
Get: 19 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB]
Get: 20 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB]
Get: 21 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB]
Get: 22 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB]
Get: 23 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB]
Get: 24 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB]
Get: 25 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB]
Get: 26 http://deb.debian.org/debian bullseye/main armhf libpam-systemd armhf 247.3-6 [262 kB]
Get: 27 http://deb.debian.org/debian bullseye/main armhf ucf all 3.0043 [74.0 kB]
Get: 28 http://deb.debian.org/debian bullseye/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get: 29 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf2.0-common all 2.42.2+dfsg-1 [320 kB]
Get: 30 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB]
Get: 31 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB]
Get: 32 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB]
Get: 33 http://deb.debian.org/debian bullseye/main armhf shared-mime-info armhf 2.0-1 [699 kB]
Get: 34 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB]
Get: 35 http://deb.debian.org/debian bullseye/main armhf libpng16-16 armhf 1.6.37-3 [277 kB]
Get: 36 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB]
Get: 37 http://deb.debian.org/debian bullseye/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB]
Get: 38 http://deb.debian.org/debian bullseye/main armhf libwebp6 armhf 0.6.1-2.1 [226 kB]
Get: 39 http://deb.debian.org/debian bullseye/main armhf libtiff5 armhf 4.2.0-1 [271 kB]
Get: 40 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.2+dfsg-1 [131 kB]
Get: 41 http://deb.debian.org/debian bullseye/main armhf gtk-update-icon-cache armhf 3.24.24-4 [86.4 kB]
Get: 42 http://deb.debian.org/debian bullseye/main armhf adwaita-icon-theme all 3.38.0-1 [10.9 MB]
Get: 43 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB]
Get: 44 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB]
Get: 45 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB]
Get: 46 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get: 47 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB]
Get: 48 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB]
Get: 49 http://deb.debian.org/debian bullseye/main armhf dbus-user-session armhf 1.12.20-2 [96.2 kB]
Get: 50 http://deb.debian.org/debian bullseye/main armhf libdconf1 armhf 0.38.0-2 [39.4 kB]
Get: 51 http://deb.debian.org/debian bullseye/main armhf dconf-service armhf 0.38.0-2 [33.6 kB]
Get: 52 http://deb.debian.org/debian bullseye/main armhf dconf-gsettings-backend armhf 0.38.0-2 [27.0 kB]
Get: 53 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB]
Get: 54 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB]
Get: 55 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB]
Get: 56 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get: 57 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get: 58 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB]
Get: 59 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB]
Get: 60 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB]
Get: 61 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB]
Get: 62 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB]
Get: 63 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 64 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get: 65 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB]
Get: 66 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB]
Get: 67 http://deb.debian.org/debian bullseye/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [357 kB]
Get: 68 http://deb.debian.org/debian bullseye/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get: 69 http://deb.debian.org/debian bullseye/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get: 70 http://deb.debian.org/debian bullseye/main armhf libfontconfig1 armhf 2.13.1-4.2 [329 kB]
Get: 71 http://deb.debian.org/debian bullseye/main armhf fontconfig armhf 2.13.1-4.2 [415 kB]
Get: 72 http://deb.debian.org/debian bullseye/main armhf libglvnd0 armhf 1.3.2-1 [51.8 kB]
Get: 73 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB]
Get: 74 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB]
Get: 75 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB]
Get: 76 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB]
Get: 77 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB]
Get: 78 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.2-1 [311 kB]
Get: 79 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.2-1 [713 kB]
Get: 80 http://deb.debian.org/debian bullseye/main armhf libdrm-common all 2.4.104-1 [14.9 kB]
Get: 81 http://deb.debian.org/debian bullseye/main armhf libdrm2 armhf 2.4.104-1 [37.7 kB]
Get: 82 http://deb.debian.org/debian bullseye/main armhf libglapi-mesa armhf 20.3.5-1 [80.2 kB]
Get: 83 http://deb.debian.org/debian bullseye/main armhf libx11-xcb1 armhf 2:1.7.2-1 [203 kB]
Get: 84 http://deb.debian.org/debian bullseye/main armhf libxcb-dri2-0 armhf 1.14-3 [103 kB]
Get: 85 http://deb.debian.org/debian bullseye/main armhf libxcb-dri3-0 armhf 1.14-3 [102 kB]
Get: 86 http://deb.debian.org/debian bullseye/main armhf libxcb-glx0 armhf 1.14-3 [116 kB]
Get: 87 http://deb.debian.org/debian bullseye/main armhf libxcb-present0 armhf 1.14-3 [101 kB]
Get: 88 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0 armhf 1.14-3 [101 kB]
Get: 89 http://deb.debian.org/debian bullseye/main armhf libxcb-sync1 armhf 1.14-3 [104 kB]
Get: 90 http://deb.debian.org/debian bullseye/main armhf libxcb-xfixes0 armhf 1.14-3 [105 kB]
Get: 91 http://deb.debian.org/debian bullseye/main armhf libxdamage1 armhf 1:1.1.5-2 [15.1 kB]
Get: 92 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB]
Get: 93 http://deb.debian.org/debian bullseye/main armhf libxfixes3 armhf 1:5.0.3-2 [20.6 kB]
Get: 94 http://deb.debian.org/debian bullseye/main armhf libxshmfence1 armhf 1.3-1 [8592 B]
Get: 95 http://deb.debian.org/debian bullseye/main armhf libxxf86vm1 armhf 1:1.1.4-1+b2 [20.2 kB]
Get: 96 http://deb.debian.org/debian bullseye/main armhf libdrm-amdgpu1 armhf 2.4.104-1 [27.1 kB]
Get: 97 http://deb.debian.org/debian bullseye/main armhf libdrm-nouveau2 armhf 2.4.104-1 [24.6 kB]
Get: 98 http://deb.debian.org/debian bullseye/main armhf libdrm-radeon1 armhf 2.4.104-1 [27.6 kB]
Get: 99 http://deb.debian.org/debian bullseye/main armhf libedit2 armhf 3.1-20191231-2+b1 [81.1 kB]
Get: 100 http://deb.debian.org/debian bullseye/main armhf libz3-4 armhf 4.8.10-1 [5959 kB]
Get: 101 http://deb.debian.org/debian bullseye/main armhf libllvm11 armhf 1:11.0.1-2 [15.4 MB]
Get: 102 http://deb.debian.org/debian bullseye/main armhf libsensors-config all 1:3.6.0-7 [32.3 kB]
Get: 103 http://deb.debian.org/debian bullseye/main armhf libsensors5 armhf 1:3.6.0-7 [49.6 kB]
Get: 104 http://deb.debian.org/debian bullseye/main armhf libvulkan1 armhf 1.2.162.0-1 [84.3 kB]
Get: 105 http://deb.debian.org/debian bullseye/main armhf libgl1-mesa-dri armhf 20.3.5-1 [6037 kB]
Get: 106 http://deb.debian.org/debian bullseye/main armhf libglx-mesa0 armhf 20.3.5-1 [167 kB]
Get: 107 http://deb.debian.org/debian bullseye/main armhf libglx0 armhf 1.3.2-1 [32.8 kB]
Get: 108 http://deb.debian.org/debian bullseye/main armhf libgl1 armhf 1.3.2-1 [94.3 kB]
Get: 109 http://deb.debian.org/debian bullseye/main armhf libxi6 armhf 2:1.7.10-1 [78.5 kB]
Get: 110 http://deb.debian.org/debian bullseye/main armhf freeglut3 armhf 2.8.1-6 [112 kB]
Get: 111 http://deb.debian.org/debian bullseye/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB]
Get: 112 http://deb.debian.org/debian bullseye/main armhf x11proto-dev all 2020.1-1 [594 kB]
Get: 113 http://deb.debian.org/debian bullseye/main armhf libxau-dev armhf 1:1.0.9-1 [22.4 kB]
Get: 114 http://deb.debian.org/debian bullseye/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.7 kB]
Get: 115 http://deb.debian.org/debian bullseye/main armhf xtrans-dev all 1.4.0-1 [98.7 kB]
Get: 116 http://deb.debian.org/debian bullseye/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B]
Get: 117 http://deb.debian.org/debian bullseye/main armhf libxcb1-dev armhf 1.14-3 [175 kB]
Get: 118 http://deb.debian.org/debian bullseye/main armhf libx11-dev armhf 2:1.7.2-1 [785 kB]
Get: 119 http://deb.debian.org/debian bullseye/main armhf libglx-dev armhf 1.3.2-1 [16.3 kB]
Get: 120 http://deb.debian.org/debian bullseye/main armhf libgl-dev armhf 1.3.2-1 [100 kB]
Get: 121 http://deb.debian.org/debian bullseye/main armhf libwayland-server0 armhf 1.18.0-2~exp1.1 [28.1 kB]
Get: 122 http://deb.debian.org/debian bullseye/main armhf libgbm1 armhf 20.3.5-1 [70.1 kB]
Get: 123 http://deb.debian.org/debian bullseye/main armhf libwayland-client0 armhf 1.18.0-2~exp1.1 [22.1 kB]
Get: 124 http://deb.debian.org/debian bullseye/main armhf libegl-mesa0 armhf 20.3.5-1 [123 kB]
Get: 125 http://deb.debian.org/debian bullseye/main armhf libegl1 armhf 1.3.2-1 [29.5 kB]
Get: 126 http://deb.debian.org/debian bullseye/main armhf libegl-dev armhf 1.3.2-1 [19.6 kB]
Get: 127 http://deb.debian.org/debian bullseye/main armhf libgles1 armhf 1.3.2-1 [12.6 kB]
Get: 128 http://deb.debian.org/debian bullseye/main armhf libgles2 armhf 1.3.2-1 [18.2 kB]
Get: 129 http://deb.debian.org/debian bullseye/main armhf libgles-dev armhf 1.3.2-1 [50.3 kB]
Get: 130 http://deb.debian.org/debian bullseye/main armhf libopengl0 armhf 1.3.2-1 [32.7 kB]
Get: 131 http://deb.debian.org/debian bullseye/main armhf libopengl-dev armhf 1.3.2-1 [5876 B]
Get: 132 http://deb.debian.org/debian bullseye/main armhf libglvnd-dev armhf 1.3.2-1 [13.9 kB]
Get: 133 http://deb.debian.org/debian bullseye/main armhf libgl1-mesa-dev armhf 20.3.5-1 [51.1 kB]
Get: 134 http://deb.debian.org/debian bullseye/main armhf libglu1-mesa armhf 9.0.1-1 [130 kB]
Get: 135 http://deb.debian.org/debian bullseye/main armhf libglu1-mesa-dev armhf 9.0.1-1 [171 kB]
Get: 136 http://deb.debian.org/debian bullseye/main armhf x11proto-xext-dev all 2020.1-1 [3404 B]
Get: 137 http://deb.debian.org/debian bullseye/main armhf libxext-dev armhf 2:1.3.3-1.1 [103 kB]
Get: 138 http://deb.debian.org/debian bullseye/main armhf x11-common all 1:7.7+22 [252 kB]
Get: 139 http://deb.debian.org/debian bullseye/main armhf libice6 armhf 2:1.0.10-1 [51.9 kB]
Get: 140 http://deb.debian.org/debian bullseye/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB]
Get: 141 http://deb.debian.org/debian bullseye/main armhf libxt6 armhf 1:1.2.0-1 [161 kB]
Get: 142 http://deb.debian.org/debian bullseye/main armhf libice-dev armhf 2:1.0.10-1 [61.9 kB]
Get: 143 http://deb.debian.org/debian bullseye/main armhf libsm-dev armhf 2:1.2.3-1 [36.1 kB]
Get: 144 http://deb.debian.org/debian bullseye/main armhf libxt-dev armhf 1:1.2.0-1 [388 kB]
Get: 145 http://deb.debian.org/debian bullseye/main armhf freeglut3-dev armhf 2.8.1-6 [170 kB]
Get: 146 http://deb.debian.org/debian bullseye/main armhf libproxy1v5 armhf 0.4.17-1 [54.4 kB]
Get: 147 http://deb.debian.org/debian bullseye/main armhf glib-networking-common all 2.66.0-2 [68.1 kB]
Get: 148 http://deb.debian.org/debian bullseye/main armhf glib-networking-services armhf 2.66.0-2 [16.9 kB]
Get: 149 http://deb.debian.org/debian bullseye/main armhf gsettings-desktop-schemas all 3.38.0-2 [588 kB]
Get: 150 http://deb.debian.org/debian bullseye/main armhf glib-networking armhf 2.66.0-2 [61.4 kB]
Get: 151 http://deb.debian.org/debian bullseye/main armhf libatk1.0-data all 2.36.0-2 [149 kB]
Get: 152 http://deb.debian.org/debian bullseye/main armhf libatk1.0-0 armhf 2.36.0-2 [45.2 kB]
Get: 153 http://deb.debian.org/debian bullseye/main armhf libatspi2.0-0 armhf 2.38.0-4 [63.1 kB]
Get: 154 http://deb.debian.org/debian bullseye/main armhf libatk-bridge2.0-0 armhf 2.38.0-1 [56.9 kB]
Get: 155 http://deb.debian.org/debian bullseye/main armhf libavahi-common-data armhf 0.8-5 [123 kB]
Get: 156 http://deb.debian.org/debian bullseye/main armhf libavahi-common3 armhf 0.8-5 [55.1 kB]
Get: 157 http://deb.debian.org/debian bullseye/main armhf libavahi-client3 armhf 0.8-5 [58.5 kB]
Get: 158 http://deb.debian.org/debian bullseye/main armhf libpixman-1-0 armhf 0.40.0-1 [466 kB]
Get: 159 http://deb.debian.org/debian bullseye/main armhf libxcb-render0 armhf 1.14-3 [110 kB]
Get: 160 http://deb.debian.org/debian bullseye/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get: 161 http://deb.debian.org/debian bullseye/main armhf libcairo2 armhf 1.16.0-5 [615 kB]
Get: 162 http://deb.debian.org/debian bullseye/main armhf libcairo-gobject2 armhf 1.16.0-5 [125 kB]
Get: 163 http://deb.debian.org/debian bullseye/main armhf liblcms2-2 armhf 2.12~rc1-2 [123 kB]
Get: 164 http://deb.debian.org/debian bullseye/main armhf libcolord2 armhf 1.4.5-3 [126 kB]
Get: 165 http://deb.debian.org/debian bullseye/main armhf libcups2 armhf 2.3.3op2-3+deb11u1 [317 kB]
Get: 166 http://deb.debian.org/debian bullseye/main armhf libdatrie1 armhf 0.2.13-1 [39.4 kB]
Get: 167 http://deb.debian.org/debian bullseye/main armhf libepoxy0 armhf 1.5.5-1 [170 kB]
Get: 168 http://deb.debian.org/debian bullseye/main armhf libfftw3-double3 armhf 3.3.8-2 [432 kB]
Get: 169 http://deb.debian.org/debian bullseye/main armhf libfftw3-single3 armhf 3.3.8-2 [715 kB]
Get: 170 http://deb.debian.org/debian bullseye/main armhf libfftw3-bin armhf 3.3.8-2 [43.5 kB]
Get: 171 http://deb.debian.org/debian bullseye/main armhf libfftw3-dev armhf 3.3.8-2 [1141 kB]
Get: 172 http://deb.debian.org/debian bullseye/main armhf libfribidi0 armhf 1.0.8-2 [62.9 kB]
Get: 173 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf-xlib-2.0-0 armhf 2.40.2-2 [44.8 kB]
Get: 174 http://deb.debian.org/debian bullseye/main armhf libgdk-pixbuf2.0-0 armhf 2.40.2-2 [14.1 kB]
Get: 175 http://deb.debian.org/debian bullseye/main armhf libgraphite2-3 armhf 1.3.14-1 [70.5 kB]
Get: 176 http://deb.debian.org/debian bullseye/main armhf libharfbuzz0b armhf 2.7.4-1 [1427 kB]
Get: 177 http://deb.debian.org/debian bullseye/main armhf libjson-glib-1.0-common all 1.6.2-1 [56.9 kB]
Get: 178 http://deb.debian.org/debian bullseye/main armhf libjson-glib-1.0-0 armhf 1.6.2-1 [58.0 kB]
Get: 179 http://deb.debian.org/debian bullseye/main armhf libthai-data all 0.1.28-3 [170 kB]
Get: 180 http://deb.debian.org/debian bullseye/main armhf libthai0 armhf 0.1.28-3 [50.9 kB]
Get: 181 http://deb.debian.org/debian bullseye/main armhf libpango-1.0-0 armhf 1.46.2-3 [173 kB]
Get: 182 http://deb.debian.org/debian bullseye/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [56.1 kB]
Get: 183 http://deb.debian.org/debian bullseye/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.8 kB]
Get: 184 http://deb.debian.org/debian bullseye/main armhf libpsl5 armhf 0.21.0-1.2 [56.1 kB]
Get: 185 http://deb.debian.org/debian bullseye/main armhf libsoup2.4-1 armhf 2.72.0-2 [246 kB]
Get: 186 http://deb.debian.org/debian bullseye/main armhf libsoup-gnome2.4-1 armhf 2.72.0-2 [21.7 kB]
Get: 187 http://deb.debian.org/debian bullseye/main armhf librest-0.7-0 armhf 0.8.1-1.1 [28.7 kB]
Get: 188 http://deb.debian.org/debian bullseye/main armhf libwayland-cursor0 armhf 1.18.0-2~exp1.1 [13.5 kB]
Get: 189 http://deb.debian.org/debian bullseye/main armhf libwayland-egl1 armhf 1.18.0-2~exp1.1 [8192 B]
Get: 190 http://deb.debian.org/debian bullseye/main armhf libxcomposite1 armhf 1:0.4.5-1 [16.1 kB]
Get: 191 http://deb.debian.org/debian bullseye/main armhf libxcursor1 armhf 1:1.2.0-2 [34.2 kB]
Get: 192 http://deb.debian.org/debian bullseye/main armhf libxinerama1 armhf 2:1.1.4-2 [17.3 kB]
Get: 193 http://deb.debian.org/debian bullseye/main armhf xkb-data all 2.29-2 [655 kB]
Get: 194 http://deb.debian.org/debian bullseye/main armhf libxkbcommon0 armhf 1.0.3-2 [89.8 kB]
Get: 195 http://deb.debian.org/debian bullseye/main armhf libxrandr2 armhf 2:1.5.1-1 [34.9 kB]
Get: 196 http://deb.debian.org/debian bullseye/main armhf libgtk-3-common all 3.24.24-4 [3757 kB]
Get: 197 http://deb.debian.org/debian bullseye/main armhf libgtk-3-0 armhf 3.24.24-4 [2338 kB]
Get: 198 http://deb.debian.org/debian bullseye/main armhf libnewmat10ldbl armhf 1.10.4-8 [130 kB]
Get: 199 http://deb.debian.org/debian bullseye/main armhf libnewmat10-dev armhf 1.10.4-8 [126 kB]
Get: 200 http://deb.debian.org/debian bullseye/main armhf libnotify4 armhf 0.7.9-3 [21.8 kB]
Get: 201 http://deb.debian.org/debian bullseye/main armhf libwxbase3.0-0v5 armhf 3.0.5.1+dfsg-2 [957 kB]
Get: 202 http://deb.debian.org/debian bullseye/main armhf wx3.0-headers all 3.0.5.1+dfsg-2 [1129 kB]
Get: 203 http://deb.debian.org/debian bullseye/main armhf libwxbase3.0-dev armhf 3.0.5.1+dfsg-2 [140 kB]
Get: 204 http://deb.debian.org/debian bullseye/main armhf libwxgtk3.0-gtk3-0v5 armhf 3.0.5.1+dfsg-2 [3836 kB]
Get: 205 http://deb.debian.org/debian bullseye/main armhf wx-common armhf 3.0.5.1+dfsg-2 [176 kB]
Get: 206 http://deb.debian.org/debian bullseye/main armhf libwxgtk3.0-gtk3-dev armhf 3.0.5.1+dfsg-2 [140 kB]
Fetched 97.7 MB in 23s (4332 kB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libapparmor1:armhf.
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Preparing to unpack .../00-libapparmor1_2.13.6-10_armhf.deb ...
Unpacking libapparmor1:armhf (2.13.6-10) ...
Selecting previously unselected package libcap2:armhf.
Preparing to unpack .../01-libcap2_1%3a2.44-1_armhf.deb ...
Unpacking libcap2:armhf (1:2.44-1) ...
Selecting previously unselected package libargon2-1:armhf.
Preparing to unpack .../02-libargon2-1_0~20171227-0.2_armhf.deb ...
Unpacking libargon2-1:armhf (0~20171227-0.2) ...
Selecting previously unselected package dmsetup.
Preparing to unpack .../03-dmsetup_2%3a1.02.175-2.1_armhf.deb ...
Unpacking dmsetup (2:1.02.175-2.1) ...
Selecting previously unselected package libdevmapper1.02.1:armhf.
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Unpacking libdevmapper1.02.1:armhf (2:1.02.175-2.1) ...
Selecting previously unselected package libjson-c5:armhf.
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Unpacking libjson-c5:armhf (0.15-2) ...
Selecting previously unselected package libcryptsetup12:armhf.
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Unpacking libcryptsetup12:armhf (2:2.3.5-1) ...
Selecting previously unselected package libip4tc2:armhf.
Preparing to unpack .../07-libip4tc2_1.8.7-1_armhf.deb ...
Unpacking libip4tc2:armhf (1.8.7-1) ...
Selecting previously unselected package libkmod2:armhf.
Preparing to unpack .../08-libkmod2_28-1_armhf.deb ...
Unpacking libkmod2:armhf (28-1) ...
Selecting previously unselected package systemd-timesyncd.
Preparing to unpack .../09-systemd-timesyncd_247.3-6_armhf.deb ...
Unpacking systemd-timesyncd (247.3-6) ...
Selecting previously unselected package systemd.
Preparing to unpack .../10-systemd_247.3-6_armhf.deb ...
Unpacking systemd (247.3-6) ...
Setting up libapparmor1:armhf (2.13.6-10) ...
Setting up libcap2:armhf (1:2.44-1) ...
Setting up libargon2-1:armhf (0~20171227-0.2) ...
Setting up libjson-c5:armhf (0.15-2) ...
Setting up libip4tc2:armhf (1.8.7-1) ...
Setting up libkmod2:armhf (28-1) ...
Setting up libdevmapper1.02.1:armhf (2:1.02.175-2.1) ...
Setting up libcryptsetup12:armhf (2:2.3.5-1) ...
Setting up systemd-timesyncd (247.3-6) ...
Created symlink /etc/systemd/system/dbus-org.freedesktop.timesync1.service -> /lib/systemd/system/systemd-timesyncd.service.
Created symlink /etc/systemd/system/sysinit.target.wants/systemd-timesyncd.service -> /lib/systemd/system/systemd-timesyncd.service.
Setting up systemd (247.3-6) ...
Created symlink /etc/systemd/system/getty.target.wants/getty@tty1.service -> /lib/systemd/system/getty@.service.
Created symlink /etc/systemd/system/multi-user.target.wants/remote-fs.target -> /lib/systemd/system/remote-fs.target.
Created symlink /etc/systemd/system/sysinit.target.wants/systemd-pstore.service -> /lib/systemd/system/systemd-pstore.service.
Initializing machine ID from random generator.
Setting up dmsetup (2:1.02.175-2.1) ...
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Preparing to unpack .../000-systemd-sysv_247.3-6_armhf.deb ...
Unpacking systemd-sysv (247.3-6) ...
Selecting previously unselected package libdbus-1-3:armhf.
Preparing to unpack .../001-libdbus-1-3_1.12.20-2_armhf.deb ...
Unpacking libdbus-1-3:armhf (1.12.20-2) ...
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Setting up libxcomposite1:armhf (1:0.4.5-1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libfftw3-dev:armhf (3.3.8-2) ...
Setting up libavahi-client3:armhf (0.8-5) ...
Setting up libdrm-amdgpu1:armhf (2.4.104-1) ...
Setting up automake (1:1.16.3-2) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libxcb-dri3-0:armhf (1.14-3) ...
Setting up gtk-update-icon-cache (3.24.24-4) ...
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Setting up libgbm1:armhf (20.3.5-1) ...
Setting up libsm-dev:armhf (2:1.2.3-1) ...
Setting up libdrm-radeon1:armhf (2.4.104-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libgl1-mesa-dri:armhf (20.3.5-1) ...
Setting up libx11-dev:armhf (2:1.7.2-1) ...
Setting up libxext6:armhf (2:1.3.3-1.1) ...
Setting up dconf-service (0.38.0-2) ...
Setting up libatspi2.0-0:armhf (2.38.0-4) ...
Setting up man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libxxf86vm1:armhf (1:1.1.4-1+b2) ...
Setting up dh-autoreconf (20) ...
Setting up libatk-bridge2.0-0:armhf (2.38.0-1) ...
Setting up libegl-mesa0:armhf (20.3.5-1) ...
Setting up adwaita-icon-theme (3.38.0-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libxfixes3:armhf (1:5.0.3-2) ...
Setting up libnotify4:armhf (0.7.9-3) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.40.2-2) ...
Setting up libxinerama1:armhf (2:1.1.4-2) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libxt6:armhf (1:1.2.0-1) ...
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Setting up libcups2:armhf (2.3.3op2-3+deb11u1) ...
Setting up libegl1:armhf (1.3.2-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libglx-mesa0:armhf (20.3.5-1) ...
Setting up libxi6:armhf (2:1.7.10-1) ...
Setting up libglx0:armhf (1.3.2-1) ...
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Setting up debhelper (13.3.4) ...
Setting up libcairo2:armhf (1.16.0-5) ...
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Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ...
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Setting up libgtk-3-common (3.24.24-4) ...
Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ...
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Setting up freeglut3:armhf (2.8.1-6) ...
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Setting up glib-networking:armhf (2.66.0-2) ...
Setting up libgles-dev:armhf (1.3.2-1) ...
Setting up libsoup2.4-1:armhf (2.72.0-2) ...
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Setting up libgl1-mesa-dev:armhf (20.3.5-1) ...
Setting up libsoup-gnome2.4-1:armhf (2.72.0-2) ...
Setting up librest-0.7-0:armhf (0.8.1-1.1) ...
Setting up libgtk-3-0:armhf (3.24.24-4) ...
Setting up libwxgtk3.0-gtk3-0v5:armhf (3.0.5.1+dfsg-2) ...
Setting up freeglut3-dev:armhf (2.8.1-6) ...
Setting up libwxgtk3.0-gtk3-dev:armhf (3.0.5.1+dfsg-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/wx/config/gtk3-unicode-3.0 to provide /usr/bin/wx-config (wx-config) in auto mode
Processing triggers for libc-bin (2.31-13) ...
Reading package lists...
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-> Finished parsing the build-deps
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fakeroot is already the newest version (1.25.3-1.1).
0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded.
I: Building the package
I: Running cd /build/objcryst-fox-1.9.6.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../objcryst-fox_1.9.6.0-2.2_source.changes
dpkg-buildpackage: info: source package objcryst-fox
dpkg-buildpackage: info: source version 1.9.6.0-2.2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Scott Talbert <swt@techie.net>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh_testdir
dh_testroot
rm -f build-stamp configure-stamp
# Add here commands to clean up after the build process.
cd /build/objcryst-fox-1.9.6.0/Fox && /usr/bin/make clean
make[1]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox'
make[1]: svnversion: No such file or directory
/usr/bin/make -f gnu.mak -C src tidy
make[2]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox/src'
make[2]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox/src'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/../ObjCryst tidy
make[2]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/ObjCryst tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/CrystVector tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/Quirks tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/RefinableObj tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/wxCryst tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/example tidy
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example'
make[4]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example/pbso4'
make[4]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example/pbso4'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example'
make[2]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst'
rm -f -Rf /build/objcryst-fox-1.9.6.0/Fox/../fftw-3.3.2 /build/objcryst-fox-1.9.6.0/Fox/../newmat /build/objcryst-fox-1.9.6.0/Fox/../wxGTK-2.8.12
/usr/bin/make -f gnu.mak -C src clean
make[2]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox/src'
make[2]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox/src'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/../ObjCryst clean
make[2]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/ObjCryst clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/CrystVector clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/Quirks clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/RefinableObj clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/wxCryst clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/ObjCryst/../ObjCryst/example clean
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example'
make[4]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example/pbso4'
make[4]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example/pbso4'
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/example'
make[2]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst'
rm -f -Rf /build/objcryst-fox-1.9.6.0/Fox/../static-libs/* /build/objcryst-fox-1.9.6.0/Fox/../fftw-3.3.2 /build/objcryst-fox-1.9.6.0/Fox/../newmat /build/objcryst-fox-1.9.6.0/Fox/../wxGTK-2.8.12
make[1]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox'
rm -rf Fox/sglite/*.o Fox/sglite/*.a Fox/atominfo/*.o Fox/atominfo/*.a
rm -f Fox-LastOptimizationStop.xml
rm -rf cctbx static-libs
dh_clean
dh_clean: warning: Compatibility levels before 10 are deprecated (level 7 in use)
debian/rules build
dh_testdir
unset CPPFLAGS CFLAGS CXXFLAGS FFLAGS LDFLAGS && \
/usr/bin/make --directory=Fox unicode=1 shared-fftw=1 \
shared-wxgtk=1 shared-glut=1 shared-newmat=1 shared-boost=0
make[1]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox'
make[1]: svnversion: No such file or directory
/usr/bin/make -f gnu.mak wxcryst=1 opengl=1 fftw=1 debug= unicode=1 shared= shared-wxgtk=1 shared-glut=1 shared-newmat=1 shared-fftw=1 -C src Fox
make[2]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox/src'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/CrystVector lib
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c CrystVector.cpp -o CrystVector.o
ar crs libCrystVector.a CrystVector.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/CrystVector'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/Quirks lib
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c VFNStreamFormat.cpp -o VFNStreamFormat.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c VFNDebug.cpp -o VFNDebug.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ci_string.cpp -o ci_string.o
ar crs libQuirks.a VFNStreamFormat.o VFNDebug.o ci_string.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/Quirks'
mkdir -p /build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/lib/ /build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include/
cd /build/objcryst-fox-1.9.6.0/Fox/src/../.. && tar -xjf cctbx.tar.bz2
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../cctbx install
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/cctbx'
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/basic.cpp -o cctbx/eltbx/basic.o
cctbx/eltbx/basic.cpp: In function 'int cctbx::eltbx::basic::match_labels(const string&, const char*)':
cctbx/eltbx/basic.cpp:46:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
46 | for (i = 0; i < work_label.size() && tab_label[i]; i++)
| ~~^~~~~~~~~~~~~~~~~~~
cctbx/eltbx/basic.cpp:48:11: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'unsigned int'} [-Wsign-compare]
48 | if (i == work_label.size() && tab_label[i] == '\0') return -i;
| ~~^~~~~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/icsd_radii.cpp -o cctbx/eltbx/icsd_radii.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/tiny_pse.cpp -o cctbx/eltbx/tiny_pse.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/fp_fdp.cpp -o cctbx/eltbx/fp_fdp.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/neutron.cpp -o cctbx/eltbx/neutron.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/wavelengths.cpp -o cctbx/eltbx/wavelengths.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/xray_scattering/it1992.cpp -o cctbx/eltbx/xray_scattering/it1992.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/xray_scattering/n_gaussian.cpp -o cctbx/eltbx/xray_scattering/n_gaussian.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/xray_scattering/wk1995.cpp -o cctbx/eltbx/xray_scattering/wk1995.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke.cpp -o cctbx/eltbx/henke.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_25_36.cpp -o cctbx/eltbx/henke_tables_25_36.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_61_72.cpp -o cctbx/eltbx/henke_tables_61_72.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_01_12.cpp -o cctbx/eltbx/henke_tables_01_12.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_37_48.cpp -o cctbx/eltbx/henke_tables_37_48.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_73_84.cpp -o cctbx/eltbx/henke_tables_73_84.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_13_24.cpp -o cctbx/eltbx/henke_tables_13_24.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_49_60.cpp -o cctbx/eltbx/henke_tables_49_60.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/henke_tables_85_92.cpp -o cctbx/eltbx/henke_tables_85_92.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki.cpp -o cctbx/eltbx/sasaki.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_25_36.cpp -o cctbx/eltbx/sasaki_tables_25_36.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_61_72.cpp -o cctbx/eltbx/sasaki_tables_61_72.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_01_12.cpp -o cctbx/eltbx/sasaki_tables_01_12.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_37_48.cpp -o cctbx/eltbx/sasaki_tables_37_48.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_73_82.cpp -o cctbx/eltbx/sasaki_tables_73_82.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_13_24.cpp -o cctbx/eltbx/sasaki_tables_13_24.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/eltbx/sasaki_tables_49_60.cpp -o cctbx/eltbx/sasaki_tables_49_60.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/bricks.cpp -o cctbx/sgtbx/bricks.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/miller.cpp -o cctbx/sgtbx/miller.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/select_generators.cpp -o cctbx/sgtbx/select_generators.o
cctbx/sgtbx/select_generators.cpp: In constructor 'cctbx::sgtbx::select_generators::any::any(const cctbx::sgtbx::space_group&, int, int)':
cctbx/sgtbx/select_generators.cpp:87:40: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
87 | else if (absolute(ri.type()) == sg.n_smx() / 6) {
| ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/tr_group.cpp -o cctbx/sgtbx/tr_group.o
cctbx/sgtbx/tr_group.cpp: In member function 'bool cctbx::sgtbx::tr_group::expand(const cctbx::sgtbx::tr_vec&)':
cctbx/sgtbx/tr_group.cpp:40:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
40 | if (i == size()) break;
| ~~^~~~~~~~~
cctbx/sgtbx/tr_group.cpp:45:19: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
45 | return size() != old_size;
| ~~~~~~~^~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/change_of_basis_op.cpp -o cctbx/sgtbx/change_of_basis_op.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reciprocal_space_asu.cpp -o cctbx/sgtbx/reciprocal_space_asu.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/seminvariant.cpp -o cctbx/sgtbx/seminvariant.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/tr_vec.cpp -o cctbx/sgtbx/tr_vec.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/find_affine.cpp -o cctbx/sgtbx/find_affine.o
cctbx/sgtbx/find_affine.cpp: In member function 'void cctbx::sgtbx::find_affine::sg_algorithm(const cctbx::sgtbx::space_group&, int)':
cctbx/sgtbx/find_affine.cpp:70:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
70 | for(int i=0;i<group.order_z();i++) {
| ~^~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reciprocal_space_ref_asu.cpp -o cctbx/sgtbx/reciprocal_space_ref_asu.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/site_symmetry.cpp -o cctbx/sgtbx/site_symmetry.o
In file included from include/boost/smart_ptr/shared_array.hpp:28,
from include/boost/shared_array.hpp:17,
from include/cctbx/sgtbx/tensor_rank_2.h:9,
from include/cctbx/sgtbx/site_symmetry.h:5,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
include/boost/smart_ptr/detail/shared_count.hpp:284:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
284 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
include/cctbx/sgtbx/site_symmetry.h: In member function 'bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const':
include/cctbx/sgtbx/site_symmetry.h:95:24: warning: comparison of integer expressions of different signedness: 'int' and 'scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type' {aka 'unsigned int'} [-Wsign-compare]
95 | for (int i=0; i<m.size(); ++i) {
| ~^~~~~~~~~
In file included from include/scitbx/error.h:16,
from include/scitbx/mat3.h:5,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
cctbx/sgtbx/site_symmetry.cpp: In member function 'scitbx::af::shared<cctbx::sgtbx::rt_mx> cctbx::sgtbx::site_symmetry::unique_ops()':
cctbx/sgtbx/site_symmetry.cpp:202:32: warning: comparison of integer expressions of different signedness: 'scitbx::af::shared_plain<cctbx::sgtbx::rt_mx>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
202 | CCTBX_ASSERT(result.size() == multiplicity_);
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
include/scitbx/error_utils.h:166:9: note: in definition of macro 'SCITBX_ERROR_UTILS_ASSERT'
166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \
| ^~~~~~~~~
cctbx/sgtbx/site_symmetry.cpp:202:5: note: in expansion of macro 'CCTBX_ASSERT'
202 | CCTBX_ASSERT(result.size() == multiplicity_);
| ^~~~~~~~~~~~
In file included from /usr/include/c++/10/bits/stl_algo.h:61,
from /usr/include/c++/10/algorithm:62,
from include/scitbx/array_family/ref.h:9,
from include/scitbx/array_family/tiny_plain.h:4,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >; _Distance = int; _Tp = cctbx::sgtbx::{anonymous}::close_mate; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_heap.h:223:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
223 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from include/cctbx/sgtbx/tr_group.h:5,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {cctbx::sgtbx::{anonymous}::close_mate}; _Tp = cctbx::sgtbx::{anonymous}::close_mate; _Alloc = std::allocator<cctbx::sgtbx::{anonymous}::close_mate>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<cctbx::sgtbx::{anonymous}::close_mate>::iterator' changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<cctbx::sgtbx::{anonymous}::close_mate>::iterator' changed in GCC 7.1
In file included from /usr/include/c++/10/algorithm:62,
from include/scitbx/array_family/ref.h:9,
from include/scitbx/array_family/tiny_plain.h:4,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1839 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1945 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1945:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
/usr/include/c++/10/bits/stl_algo.h:1959:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1959 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from include/cctbx/sgtbx/tr_group.h:5,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function 'void cctbx::sgtbx::site_symmetry::build_special_op()':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/algorithm:62,
from include/scitbx/array_family/ref.h:9,
from include/scitbx/array_family/tiny_plain.h:4,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/site_symmetry_table.h:4,
from cctbx/sgtbx/site_symmetry.cpp:1:
/usr/include/c++/10/bits/stl_algo.h:1974:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1974 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1975 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1976 | __comp);
| ~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1886:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1886 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/stl_algo.h:1891:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<cctbx::sgtbx::{anonymous}::close_mate*, std::vector<cctbx::sgtbx::{anonymous}::close_mate> >' changed in GCC 7.1
1891 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/utils.cpp -o cctbx/sgtbx/utils.o
cctbx/sgtbx/utils.cpp: In function 'int cctbx::sgtbx::utils::change_denominator(const int*, int, int*, int, int)':
cctbx/sgtbx/utils.cpp:11:26: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
11 | for(std::size_t i=0;i<n;i++) {
| ~^~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/group_codes.cpp -o cctbx/sgtbx/group_codes.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/rot_mx.cpp -o cctbx/sgtbx/rot_mx.o
cctbx/sgtbx/rot_mx.cpp: In member function 'int cctbx::sgtbx::rot_mx::order(int) const':
cctbx/sgtbx/rot_mx.cpp:96:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
96 | if (type % 2) return -type * 2;
| ^~
cctbx/sgtbx/rot_mx.cpp:97:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
97 | return -type;
| ^~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/space_group.cpp -o cctbx/sgtbx/space_group.o
In file included from include/scitbx/error.h:16,
from include/scitbx/mat3.h:5,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from cctbx/sgtbx/space_group.cpp:1:
cctbx/sgtbx/space_group.cpp: In member function 'cctbx::sgtbx::change_of_basis_op cctbx::sgtbx::space_group::construct_z2p_op(int, int) const':
cctbx/sgtbx/space_group.cpp:383:48: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
383 | result.c().r().num().determinant() == n_ltr() * r_den_3);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
include/scitbx/error_utils.h:166:9: note: in definition of macro 'SCITBX_ERROR_UTILS_ASSERT'
166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \
| ^~~~~~~~~
cctbx/sgtbx/space_group.cpp:382:11: note: in expansion of macro 'CCTBX_ASSERT'
382 | CCTBX_ASSERT(
| ^~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/wyckoff.cpp -o cctbx/sgtbx/wyckoff.o
In file included from include/boost/smart_ptr/shared_array.hpp:28,
from include/boost/shared_array.hpp:17,
from include/cctbx/sgtbx/tensor_rank_2.h:9,
from include/cctbx/sgtbx/site_symmetry.h:5,
from include/cctbx/sgtbx/wyckoff.h:4,
from cctbx/sgtbx/wyckoff.cpp:1:
include/boost/smart_ptr/detail/shared_count.hpp:284:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
284 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/wyckoff.h:4,
from cctbx/sgtbx/wyckoff.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/cctbx/sgtbx/wyckoff.h:4,
from cctbx/sgtbx/wyckoff.cpp:1:
include/cctbx/sgtbx/site_symmetry.h: In member function 'bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const':
include/cctbx/sgtbx/site_symmetry.h:95:24: warning: comparison of integer expressions of different signedness: 'int' and 'scitbx::af::const_ref<cctbx::sgtbx::rt_mx>::size_type' {aka 'unsigned int'} [-Wsign-compare]
95 | for (int i=0; i<m.size(); ++i) {
| ~^~~~~~~~~
In file included from include/scitbx/error.h:16,
from include/scitbx/mat3.h:5,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/site_constraints.h:4,
from include/cctbx/sgtbx/site_symmetry.h:4,
from include/cctbx/sgtbx/wyckoff.h:4,
from cctbx/sgtbx/wyckoff.cpp:1:
cctbx/sgtbx/wyckoff.cpp: In member function 'scitbx::af::shared<cctbx::sgtbx::rt_mx> cctbx::sgtbx::wyckoff::position::unique_ops(const cctbx::sgtbx::space_group&)':
cctbx/sgtbx/wyckoff.cpp:32:32: warning: comparison of integer expressions of different signedness: 'scitbx::af::shared_plain<cctbx::sgtbx::rt_mx>::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare]
32 | CCTBX_ASSERT(result.size() == multiplicity_);
| ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
include/scitbx/error_utils.h:166:9: note: in definition of macro 'SCITBX_ERROR_UTILS_ASSERT'
166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \
| ^~~~~~~~~
cctbx/sgtbx/wyckoff.cpp:32:5: note: in expansion of macro 'CCTBX_ASSERT'
32 | CCTBX_ASSERT(result.size() == multiplicity_);
| ^~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/hall_in.cpp -o cctbx/sgtbx/hall_in.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/rot_mx_info.cpp -o cctbx/sgtbx/rot_mx_info.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/space_group_type.cpp -o cctbx/sgtbx/space_group_type.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/lattice_symmetry.cpp -o cctbx/sgtbx/lattice_symmetry.o
cctbx/sgtbx/lattice_symmetry.cpp: In function 'double cctbx::sgtbx::lattice_symmetry::find_max_delta(const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&)':
cctbx/sgtbx/lattice_symmetry.cpp:18:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
18 | for(int i_smx=1;i_smx<space_group.n_smx();i_smx++) {
| ~~~~~^~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:72,
from include/cctbx/sgtbx/tr_group.h:5,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/lattice_symmetry.h:4,
from cctbx/sgtbx/lattice_symmetry.cpp:1:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
426 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/10/bits/vector.tcc: In function 'cctbx::sgtbx::space_group cctbx::sgtbx::lattice_symmetry::group(const cctbx::uctbx::unit_cell&, double, bool)':
/usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/row_echelon_solve.cpp -o cctbx/sgtbx/row_echelon_solve.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/symbols.cpp -o cctbx/sgtbx/symbols.o
cctbx/sgtbx/symbols.cpp: In function 'void cctbx::sgtbx::symbols::ad_hoc_1992_symbol_as_a1983_symbol(std::string&)':
cctbx/sgtbx/symbols.cpp:907:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::size_t' {aka 'unsigned int'} [-Wsign-compare]
907 | for(int i=0;i<n;i+=2) {
| ~^~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/lattice_tr.cpp -o cctbx/sgtbx/lattice_tr.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/rt_mx.cpp -o cctbx/sgtbx/rt_mx.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/tensor_rank_2.cpp -o cctbx/sgtbx/tensor_rank_2.o
In file included from include/boost/smart_ptr/shared_array.hpp:28,
from include/boost/shared_array.hpp:17,
from include/cctbx/sgtbx/tensor_rank_2.h:9,
from cctbx/sgtbx/tensor_rank_2.cpp:1:
include/boost/smart_ptr/detail/shared_count.hpp:284:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
284 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/scitbx/array_family/tiny.h:4,
from include/scitbx/vec3.h:4,
from include/scitbx/mat3.h:6,
from include/cctbx/sgtbx/basic.h:4,
from include/cctbx/sgtbx/tr_vec.h:4,
from include/cctbx/sgtbx/rot_mx.h:4,
from include/cctbx/sgtbx/rt_mx.h:4,
from include/cctbx/sgtbx/change_of_basis_op.h:4,
from include/cctbx/sgtbx/tr_group.h:4,
from include/cctbx/sgtbx/space_group.h:4,
from include/cctbx/sgtbx/tensor_rank_2.h:4,
from cctbx/sgtbx/tensor_rank_2.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reference_settings/hall_symbol_table.cpp -o cctbx/sgtbx/reference_settings/hall_symbol_table.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reference_settings/normalizer.cpp -o cctbx/sgtbx/reference_settings/normalizer.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reference_settings/matrix_group_code_table.cpp -o cctbx/sgtbx/reference_settings/matrix_group_code_table.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/sgtbx/reference_settings/wyckoff.cpp -o cctbx/sgtbx/reference_settings/wyckoff.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/asu.cpp -o cctbx/miller/asu.o
In file included from include/boost/mpl/aux_/na_assert.hpp:23,
from include/boost/mpl/arg.hpp:25,
from include/boost/mpl/placeholders.hpp:24,
from include/boost/mpl/apply.hpp:24,
from include/boost/mpl/aux_/iter_apply.hpp:17,
from include/boost/mpl/aux_/find_if_pred.hpp:14,
from include/boost/mpl/find_if.hpp:17,
from include/boost/mpl/find.hpp:17,
from include/boost/mpl/aux_/contains_impl.hpp:20,
from include/boost/mpl/contains.hpp:20,
from include/boost/math/policies/policy.hpp:10,
from include/boost/math/tools/precision.hpp:19,
from include/boost/math/tools/fraction.hpp:17,
from include/boost/math/special_functions/gamma.hpp:28,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/mpl/assert.hpp:154:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
154 | failed ************ (Pred::************
| ^
include/boost/mpl/assert.hpp:159:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
159 | failed ************ (boost::mpl::not_<Pred>::************
| ^
In file included from include/boost/smart_ptr/shared_ptr.hpp:32,
from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/smart_ptr/detail/shared_count.hpp:284:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
284 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:140:65: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
140 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:269:30: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
269 | explicit shared_ptr(std::auto_ptr<Y> & r): px(r.get()), pn()
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:313:34: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
313 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/math/special_functions/trunc.hpp:15,
from include/boost/math/special_functions/gamma.hpp:35,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isfinite(T)':
include/boost/math/special_functions/fpclassify.hpp:315:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
315 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isnormal(T)':
include/boost/math/special_functions/fpclassify.hpp:374:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
374 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isinf(T)':
include/boost/math/special_functions/fpclassify.hpp:451:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
451 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isnan(T)':
include/boost/math/special_functions/fpclassify.hpp:520:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
520 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
In file included from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::detail::tgamma(T1, T2, const Policy&, mpl_::false_)':
include/boost/math/special_functions/gamma.hpp:1253:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1253 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::tgamma_lower(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1375:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1375 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::gamma_q(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1404:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1404 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::gamma_p(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1433:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1433 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
In file included from include/boost/math/special_functions/detail/igamma_inverse.hpp:15,
from include/boost/math/special_functions/gamma.hpp:1528,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/math/special_functions/sign.hpp: In function 'int boost::math::signbit(T)':
include/boost/math/special_functions/sign.hpp:67:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
67 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
In file included from include/boost/math/special_functions/gamma.hpp:1528,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/boost/math/special_functions/detail/igamma_inverse.hpp: In member function 'std::tuple<T, T, T> boost::math::detail::gamma_p_inverse_func<T, Policy>::operator()(const T&) const':
include/boost/math/special_functions/detail/igamma_inverse.hpp:345:58: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
345 | typedef typename lanczos::lanczos<T, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
In file included from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from include/cctbx/miller/asu.h:4,
from cctbx/miller/asu.cpp:1:
include/scitbx/math/bessel.h: In function 'FloatType scitbx::math::bessel::inverse_i1_over_i0(const FloatType&)':
include/scitbx/math/bessel.h:95:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
95 | if (x >= 0.0) return (((q1>0.0)? r1 : -r1) + ((q2>0.0)? r2 : -r2) - w);
| ^~
include/scitbx/math/bessel.h:96:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
96 | return -(((q1>0.0)? r1 : -r1) + ((q2>0.0)? r2 : -r2) - w);
| ^~~~~~
cctbx/miller/asu.cpp: In constructor 'cctbx::miller::asym_index::asym_index(const cctbx::miller::sym_equiv_indices&)':
cctbx/miller/asu.cpp:44:38: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
44 | for(std::size_t i_mate=0;i_mate<h_eq.f_mates(false);i_mate++) {
| ~~~~~~^~~~~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/index_generator.cpp -o cctbx/miller/index_generator.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/match_bijvoet_mates.cpp -o cctbx/miller/match_bijvoet_mates.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/sym_equiv.cpp -o cctbx/miller/sym_equiv.o
In file included from include/boost/mpl/aux_/na_assert.hpp:23,
from include/boost/mpl/arg.hpp:25,
from include/boost/mpl/placeholders.hpp:24,
from include/boost/mpl/apply.hpp:24,
from include/boost/mpl/aux_/iter_apply.hpp:17,
from include/boost/mpl/aux_/find_if_pred.hpp:14,
from include/boost/mpl/find_if.hpp:17,
from include/boost/mpl/find.hpp:17,
from include/boost/mpl/aux_/contains_impl.hpp:20,
from include/boost/mpl/contains.hpp:20,
from include/boost/math/policies/policy.hpp:10,
from include/boost/math/tools/precision.hpp:19,
from include/boost/math/tools/fraction.hpp:17,
from include/boost/math/special_functions/gamma.hpp:28,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/mpl/assert.hpp:154:21: warning: unnecessary parentheses in declaration of 'assert_arg' [-Wparentheses]
154 | failed ************ (Pred::************
| ^
include/boost/mpl/assert.hpp:159:21: warning: unnecessary parentheses in declaration of 'assert_not_arg' [-Wparentheses]
159 | failed ************ (boost::mpl::not_<Pred>::************
| ^
In file included from include/boost/smart_ptr/shared_ptr.hpp:32,
from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/smart_ptr/detail/shared_count.hpp:284:33: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
284 | explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:140:65: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
140 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:269:30: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
269 | explicit shared_ptr(std::auto_ptr<Y> & r): px(r.get()), pn()
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/shared_ptr.hpp:17,
from include/boost/format/alt_sstream.hpp:21,
from include/boost/format/internals.hpp:23,
from include/boost/format.hpp:38,
from include/boost/math/policies/error_handling.hpp:30,
from include/boost/math/special_functions/gamma.hpp:31,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/smart_ptr/shared_ptr.hpp:313:34: warning: 'template<class> class std::auto_ptr' is deprecated [-Wdeprecated-declarations]
313 | shared_ptr & operator=( std::auto_ptr<Y> & r )
| ^~~~~~~~
In file included from /usr/include/c++/10/memory:83,
from include/scitbx/array_family/detail/misc.h:5,
from include/scitbx/array_family/tiny_plain.h:5,
from include/cctbx/hendrickson_lattman.h:4,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
/usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from include/boost/math/special_functions/trunc.hpp:15,
from include/boost/math/special_functions/gamma.hpp:35,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isfinite(T)':
include/boost/math/special_functions/fpclassify.hpp:315:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
315 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isnormal(T)':
include/boost/math/special_functions/fpclassify.hpp:374:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
374 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isinf(T)':
include/boost/math/special_functions/fpclassify.hpp:451:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
451 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
include/boost/math/special_functions/fpclassify.hpp: In function 'bool boost::math::isnan(T)':
include/boost/math/special_functions/fpclassify.hpp:520:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
520 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
In file included from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::detail::tgamma(T1, T2, const Policy&, mpl_::false_)':
include/boost/math/special_functions/gamma.hpp:1253:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1253 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::tgamma_lower(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1375:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1375 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::gamma_q(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1404:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1404 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
include/boost/math/special_functions/gamma.hpp: In function 'typename boost::math::tools::promote_args<RT1, RT2>::type boost::math::gamma_p(RT1, RT2, const Policy&)':
include/boost/math/special_functions/gamma.hpp:1433:64: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
1433 | typedef typename lanczos::lanczos<value_type, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
In file included from include/boost/math/special_functions/detail/igamma_inverse.hpp:15,
from include/boost/math/special_functions/gamma.hpp:1528,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/math/special_functions/sign.hpp: In function 'int boost::math::signbit(T)':
include/boost/math/special_functions/sign.hpp:67:55: warning: typedef 'fp_tag' locally defined but not used [-Wunused-local-typedefs]
67 | typedef typename boost::is_floating_point<T>::type fp_tag;
| ^~~~~~
In file included from include/boost/math/special_functions/gamma.hpp:1528,
from include/boost/math/special_functions/detail/bessel_jy.hpp:14,
from include/boost/math/special_functions/bessel.hpp:17,
from include/scitbx/math/bessel.h:9,
from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/boost/math/special_functions/detail/igamma_inverse.hpp: In member function 'std::tuple<T, T, T> boost::math::detail::gamma_p_inverse_func<T, Policy>::operator()(const T&) const':
include/boost/math/special_functions/detail/igamma_inverse.hpp:345:58: warning: typedef 'evaluation_type' locally defined but not used [-Wunused-local-typedefs]
345 | typedef typename lanczos::lanczos<T, Policy>::type evaluation_type;
| ^~~~~~~~~~~~~~~
In file included from include/cctbx/hendrickson_lattman.h:6,
from include/cctbx/miller/sym_equiv.h:4,
from cctbx/miller/sym_equiv.cpp:1:
include/scitbx/math/bessel.h: In function 'FloatType scitbx::math::bessel::inverse_i1_over_i0(const FloatType&)':
include/scitbx/math/bessel.h:95:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
95 | if (x >= 0.0) return (((q1>0.0)? r1 : -r1) + ((q2>0.0)? r2 : -r2) - w);
| ^~
include/scitbx/math/bessel.h:96:19: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
96 | return -(((q1>0.0)? r1 : -r1) + ((q2>0.0)? r2 : -r2) - w);
| ^~~~~~
cctbx/miller/sym_equiv.cpp: In member function 'cctbx::miller::sym_equiv_index cctbx::miller::sym_equiv_indices::operator()(std::size_t, std::size_t) const':
cctbx/miller/sym_equiv.cpp:58:16: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
58 | if (i_mate >= f_mates(false) || i_indices >= indices_.size()) {
| ~~~~~~~^~~~~~~~~~~~~~~~~
cctbx/miller/sym_equiv.cpp: In member function 'cctbx::miller::sym_equiv_indices::index_mate_indices_decomposition cctbx::miller::sym_equiv_indices::decompose_index_mate_indices(std::size_t) const':
cctbx/miller/sym_equiv.cpp:68:11: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
68 | if (i >= multiplicity(false)) {
| ~~^~~~~~~~~~~~~~~~~~~~~~
cctbx/miller/sym_equiv.cpp: In member function 'scitbx::af::shared<cctbx::miller::sym_equiv_index> cctbx::miller::sym_equiv_indices::p1_listing(bool) const':
cctbx/miller/sym_equiv.cpp:92:28: warning: comparison of integer expressions of different signedness: 'std::size_t' {aka 'unsigned int'} and 'int' [-Wsign-compare]
92 | for(std::size_t i=0;i<multiplicity(false);i++) {
| ~^~~~~~~~~~~~~~~~~~~~
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/bins.cpp -o cctbx/miller/bins.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/index_span.cpp -o cctbx/miller/index_span.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/miller/match_indices.cpp -o cctbx/miller/match_indices.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/uctbx/uctbx.cpp -o cctbx/uctbx/uctbx.o
g++ -O3 -Wall -pedantic -Iinclude -c cctbx/uctbx/spoil_optimization.cpp -o cctbx/uctbx/spoil_optimization.o
ar crs libcctbx.a cctbx/eltbx/basic.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/neutron.o cctbx/eltbx/wavelengths.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/sgtbx/bricks.o cctbx/sgtbx/miller.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/utils.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/space_group.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/symbols.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/miller/asu.o cctbx/miller/index_generator.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/sym_equiv.o cctbx/miller/bins.o cctbx/miller/index_span.o cctbx/miller/match_indices.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o
cp -f libcctbx.a ../static-libs/lib/
rm -Rf ../static-libs/include/boost ../static-libs/include/cctbx ../static-libs/include/scitbx
cp -Rf include/* ../static-libs/include/
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/cctbx'
#ln -sf /build/objcryst-fox-1.9.6.0/Fox/src/../../boost /build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include/
#rm -Rf /build/objcryst-fox-1.9.6.0/Fox/src/../../cctbx
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/RefinableObj/ lib
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Tracker.cpp -o Tracker.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Simplex.cpp -o Simplex.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c RefinableObj.cpp -o RefinableObj.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c GlobalOptimObj.cpp -o GlobalOptimObj.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c IO.cpp -o IO.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c LSQNumObj.cpp -o LSQNumObj.o
ar crs libRefinableObj.a Tracker.o Simplex.o RefinableObj.o GlobalOptimObj.o IO.o LSQNumObj.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/RefinableObj'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/ObjCryst lib
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Indexing.cpp -o Indexing.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c CIF.cpp -o CIF.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ReflectionProfile.cpp -o ReflectionProfile.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c PowderPatternBackgroundBayesianMinimiser.cpp -o PowderPatternBackgroundBayesianMinimiser.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Polyhedron.cpp -o Polyhedron.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ScatteringCorr.cpp -o ScatteringCorr.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ZScatterer.cpp -o ZScatterer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c SpaceGroup.cpp -o SpaceGroup.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Scatterer.cpp -o Scatterer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Atom.cpp -o Atom.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Molecule.cpp -o Molecule.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ScatteringPower.cpp -o ScatteringPower.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ScatteringPowerSphere.cpp -o ScatteringPowerSphere.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Crystal.cpp -o Crystal.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c ScatteringData.cpp -o ScatteringData.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c DiffractionDataSingleCrystal.cpp -o DiffractionDataSingleCrystal.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c PowderPattern.cpp -o PowderPattern.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c Exception.cpp -o Exception.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor.cpp -o geomStructFactor.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_001.cpp -o geomStructFactor_001.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_002.cpp -o geomStructFactor_002.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_067.cpp -o geomStructFactor_067.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_097.cpp -o geomStructFactor_097.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_230.cpp -o geomStructFactor_230.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c geomStructFactor_centro.cpp -o geomStructFactor_centro.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c IO.cpp -o IO.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c UnitCell.cpp -o UnitCell.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c test.cpp -o test.o
ar crs libcryst.a Indexing.o CIF.o ReflectionProfile.o PowderPatternBackgroundBayesianMinimiser.o Polyhedron.o ScatteringCorr.o ZScatterer.o SpaceGroup.o Scatterer.o Atom.o Molecule.o ScatteringPower.o ScatteringPowerSphere.o Crystal.o ScatteringData.o DiffractionDataSingleCrystal.o PowderPattern.o Exception.o geomStructFactor.o geomStructFactor_001.o geomStructFactor_002.o geomStructFactor_067.o geomStructFactor_097.o geomStructFactor_230.o geomStructFactor_centro.o IO.o UnitCell.o test.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/ObjCryst'
/usr/bin/make -f gnu.mak -C /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/wxCryst lib
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxLSQ.cpp -o wxLSQ.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxTrackerGraph.cpp -o wxTrackerGraph.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxMultiGraph.cpp -o wxMultiGraph.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxScatteringPowerSphere.cpp -o wxScatteringPowerSphere.o
cc1: warning: command-line option '-std=gnu++98' is valid for C++/ObjC++ but not for C
cc -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c trackball.c -o trackball.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxDiffractionSingleCrystal.cpp -o wxDiffractionSingleCrystal.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxCryst.cpp -o wxCryst.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxRefinableObj.cpp -o wxRefinableObj.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxScatteringPower.cpp -o wxScatteringPower.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxScatterer.cpp -o wxScatterer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxAtom.cpp -o wxAtom.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxMolecule.cpp -o wxMolecule.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxCrystal.cpp -o wxCrystal.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxZScatterer.cpp -o wxZScatterer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxPowderPattern.cpp -o wxPowderPattern.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c wxGlobalOptimObj.cpp -o wxGlobalOptimObj.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c mpVector.cpp -o mpVector.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -c MC.cpp -o MC.o
ar crs libwxcryst.a wxLSQ.o wxTrackerGraph.o wxMultiGraph.o wxScatteringPowerSphere.o trackball.o wxDiffractionSingleCrystal.o wxCryst.o wxRefinableObj.o wxScatteringPower.o wxScatterer.o wxAtom.o wxMolecule.o wxCrystal.o wxZScatterer.o wxPowderPattern.o wxGlobalOptimObj.o mpVector.o MC.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/ObjCryst/wxCryst'
/usr/bin/make -f gnu.mak libFox
make[3]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox/src'
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c Fox.cpp -o Fox.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c FoxJob.cpp -o FoxJob.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c GridResult.cpp -o GridResult.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c IOSocket.cpp -o IOSocket.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c FoxServerThread.cpp -o FoxServerThread.o
In file included from /usr/include/c++/10/vector:72,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/RefinableObj/RefinableObj.h:30,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/wxCryst/wxRefinableObj.h:39,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/wxCryst/wxCrystal.h:32,
from FoxServerThread.cpp:3:
/usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, const _Tp&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/10/bits/vector.tcc:431:5: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
431 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/10/vector:67,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/RefinableObj/RefinableObj.h:30,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/wxCryst/wxRefinableObj.h:39,
from /build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/../ObjCryst/wxCryst/wxCrystal.h:32,
from FoxServerThread.cpp:3:
/usr/include/c++/10/bits/stl_vector.h: In member function 'bool FoxServerThread::AnalyzeMessage(std::string)':
/usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1198 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c FoxServer.cpp -o FoxServer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c FoxClient.cpp -o FoxClient.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c WXFoxClient.cpp -o WXFoxClient.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c WXFoxServer.cpp -o WXFoxServer.o
g++ -O3 -w -ffast-math -fstrict-aliasing -pipe -fomit-frame-pointer -funroll-loops -std=gnu++98 -I/include -I/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/.. -I/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/include -DOBJCRYST_GL -I/usr/X11R6/include -IGL -DHAVE_GLUT -D__WX__CRYST__ `wx-config --unicode=yes --cxxflags` -DHAVE_FFTW -DREAL=float -D'__FOXVERSION__=""' -c WXGridWindow.cpp -o WXGridWindow.o
make[3]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox/src'
g++ -L/usr/lib -L/usr/local/lib -L/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/CrystVector -L/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/ObjCryst -L/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/RefinableObj -L/build/objcryst-fox-1.9.6.0/Fox/src/../../static-libs/lib -L/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/Quirks -L/build/objcryst-fox-1.9.6.0/Fox/src/../../ObjCryst/wxCryst -L/x86_64/lib -o Fox Fox.o FoxJob.o GridResult.o IOSocket.o FoxServerThread.o FoxServer.o FoxClient.o WXFoxClient.o WXFoxServer.o WXGridWindow.o -s -lm -lcryst -lCrystVector -lQuirks -lRefinableObj -lcctbx -lnewmat -L/usr/X11R6/lib -lwxcryst `wx-config --unicode=yes --libs adv,core,base,net` `wx-config --unicode=yes --gl-libs` -lGL -lGLU -lglut -lfftw3f
make[2]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox/src'
make[1]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox'
touch build-stamp
fakeroot debian/rules binary
dh_testdir
dh_testroot
dh_prep
dh_installdirs
dh_installdirs: warning: Compatibility levels before 10 are deprecated (level 7 in use)
# Install the package into debian/objcryst-fox and rename executable to "fox"
/usr/bin/make --directory=Fox install DESTDIR=/build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/bin
make[1]: Entering directory '/build/objcryst-fox-1.9.6.0/Fox'
make[1]: svnversion: No such file or directory
install -m 755 src/Fox /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/bin
make[1]: Leaving directory '/build/objcryst-fox-1.9.6.0/Fox'
mv /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/bin/Fox /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/bin/fox
dh_install debian/fox.xpm usr/share/pixmaps/
dh_install: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_install debian/fox.desktop usr/share/applications/
dh_install: warning: Compatibility levels before 10 are deprecated (level 7 in use)
# Install the example files
cp -a Fox/example /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/share/doc/objcryst-fox/
rm -rf /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/share/doc/objcryst-fox/example/.svn
rm -rf /build/objcryst-fox-1.9.6.0/debian/objcryst-fox/usr/share/doc/objcryst-fox/example/tutorial-*/.svn
dh_testdir
dh_testroot
dh_installchangelogs Fox/ChangeLog
dh_installdocs
dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_installman
dh_installman: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_link
dh_strip
dh_strip: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_compress --exclude=.xml --exclude=.pdb --exclude=.fhz --exclude=.dat --exclude=.txt
dh_compress: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_fixperms
dh_installdeb
dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dh_shlibdeps
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 7 in use)
dpkg-shlibdeps: warning: debian/objcryst-fox/usr/bin/fox contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'objcryst-fox' in '../objcryst-fox_1.9.6.0-2.2_armhf.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../objcryst-fox_1.9.6.0-2.2_armhf.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/1673 and its subdirectories
I: Current time: Sat Aug 14 04:25:45 -12 2021
I: pbuilder-time-stamp: 1628958345