I: pbuilder: network access will be disabled during build
I: Current time: Sun May 30 23:48:03 +14 2021
I: pbuilder-time-stamp: 1622368083
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz]
I: copying local configuration
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: using eatmydata during job
I: Copying source file
I: copying [libssw_1.1-13.dsc]
I: copying [./libssw_1.1.orig.tar.gz]
I: copying [./libssw_1.1-13.debian.tar.xz]
I: Extracting source
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.4McaTark/trustedkeys.kbx': General error
gpgv: Signature made Sun Feb 21 10:49:39 2021 +14
gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./libssw_1.1-13.dsc
dpkg-source: info: extracting libssw in libssw-1.1
dpkg-source: info: unpacking libssw_1.1.orig.tar.gz
dpkg-source: info: unpacking libssw_1.1-13.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying build_all_libs.patch
dpkg-source: info: applying hardening.patch
dpkg-source: info: applying rename_tool.patch
dpkg-source: info: applying simde.patch
dpkg-source: info: applying malloc
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/D01_modify_environment starting
debug: Running on ionos2-i386.
I: Changing host+domainname to test build reproducibility
I: Adding a custom variable just for the fun of it...
I: Changing /bin/sh to bash
Removing 'diversion of /bin/sh to /bin/sh.distrib by dash'
Adding 'diversion of /bin/sh to /bin/sh.distrib by bash'
Removing 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by dash'
Adding 'diversion of /usr/share/man/man1/sh.1.gz to /usr/share/man/man1/sh.distrib.1.gz by bash'
I: Setting pbuilder2's login shell to /bin/bash
I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/D01_modify_environment finished
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/D02_print_environment starting
I: set
BASH=/bin/sh
BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:hostcomplete:interactive_comments:progcomp:promptvars:sourcepath
BASH_ALIASES=()
BASH_ARGC=()
BASH_ARGV=()
BASH_CMDS=()
BASH_LINENO=([0]="12" [1]="0")
BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment")
BASH_VERSINFO=([0]="5" [1]="1" [2]="4" [3]="1" [4]="release" [5]="i686-pc-linux-gnu")
BASH_VERSION='5.1.4(1)-release'
BUILDDIR=/build
BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other'
BUILDUSERNAME=pbuilder2
BUILD_ARCH=i386
DEBIAN_FRONTEND=noninteractive
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=10'
DIRSTACK=()
DISTRIBUTION=
EUID=0
FUNCNAME=([0]="Echo" [1]="main")
GROUPS=()
HOME=/root
HOSTNAME=i-capture-the-hostname
HOSTTYPE=i686
HOST_ARCH=i386
IFS='
'
INVOCATION_ID=19416c10f5f04a528645f248c792d6cf
LANG=C
LANGUAGE=de_CH:de
LC_ALL=C
LD_LIBRARY_PATH=/usr/lib/libeatmydata
LD_PRELOAD=libeatmydata.so
MACHTYPE=i686-pc-linux-gnu
MAIL=/var/mail/root
OPTERR=1
OPTIND=1
OSTYPE=linux-gnu
PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path
PBCURRENTCOMMANDLINEOPERATION=build
PBUILDER_OPERATION=build
PBUILDER_PKGDATADIR=/usr/share/pbuilder
PBUILDER_PKGLIBDIR=/usr/lib/pbuilder
PBUILDER_SYSCONFDIR=/etc
PIPESTATUS=([0]="0")
POSIXLY_CORRECT=y
PPID=30664
PS4='+ '
PWD=/
SHELL=/bin/bash
SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix
SHLVL=3
SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.amEWTfmsoR/pbuilderrc_3hrV --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.amEWTfmsoR/b2 --logfile b2/build.log --extrapackages usrmerge libssw_1.1-13.dsc'
SUDO_GID=112
SUDO_UID=107
SUDO_USER=jenkins
TERM=unknown
TZ=/usr/share/zoneinfo/Etc/GMT-14
UID=0
USER=root
_='I: set'
http_proxy=http://78.137.99.97:3128
I: uname -a
Linux i-capture-the-hostname 4.19.0-16-686-pae #1 SMP Debian 4.19.181-1 (2021-03-19) i686 GNU/Linux
I: ls -l /bin
total 5780
-rwxr-xr-x 1 root root 1367848 Feb 25 10:57 bash
-rwxr-xr-x 3 root root 38280 Jul 21 2020 bunzip2
-rwxr-xr-x 3 root root 38280 Jul 21 2020 bzcat
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzcmp -> bzdiff
-rwxr-xr-x 1 root root 2225 Jul 21 2020 bzdiff
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzegrep -> bzgrep
-rwxr-xr-x 1 root root 4877 Sep 5 2019 bzexe
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzfgrep -> bzgrep
-rwxr-xr-x 1 root root 3775 Jul 21 2020 bzgrep
-rwxr-xr-x 3 root root 38280 Jul 21 2020 bzip2
-rwxr-xr-x 1 root root 17768 Jul 21 2020 bzip2recover
lrwxrwxrwx 1 root root 6 Jul 21 2020 bzless -> bzmore
-rwxr-xr-x 1 root root 1297 Jul 21 2020 bzmore
-rwxr-xr-x 1 root root 38824 Sep 23 2020 cat
-rwxr-xr-x 1 root root 71624 Sep 23 2020 chgrp
-rwxr-xr-x 1 root root 67528 Sep 23 2020 chmod
-rwxr-xr-x 1 root root 75752 Sep 23 2020 chown
-rwxr-xr-x 1 root root 157960 Sep 23 2020 cp
-rwxr-xr-x 1 root root 128724 Dec 11 03:23 dash
-rwxr-xr-x 1 root root 124904 Sep 23 2020 date
-rwxr-xr-x 1 root root 92172 Sep 23 2020 dd
-rwxr-xr-x 1 root root 100752 Sep 23 2020 df
-rwxr-xr-x 1 root root 153964 Sep 23 2020 dir
-rwxr-xr-x 1 root root 83644 Feb 8 04:38 dmesg
lrwxrwxrwx 1 root root 8 Nov 8 2019 dnsdomainname -> hostname
lrwxrwxrwx 1 root root 8 Nov 8 2019 domainname -> hostname
-rwxr-xr-x 1 root root 34664 Sep 23 2020 echo
-rwxr-xr-x 1 root root 28 Nov 10 2020 egrep
-rwxr-xr-x 1 root root 34664 Sep 23 2020 false
-rwxr-xr-x 1 root root 28 Nov 10 2020 fgrep
-rwxr-xr-x 1 root root 71928 Feb 8 04:38 findmnt
-rwsr-xr-x 1 root root 30112 Feb 27 06:12 fusermount
-rwxr-xr-x 1 root root 210488 Nov 10 2020 grep
-rwxr-xr-x 2 root root 2346 Mar 3 13:30 gunzip
-rwxr-xr-x 1 root root 6376 Mar 3 13:30 gzexe
-rwxr-xr-x 1 root root 100952 Mar 3 13:30 gzip
-rwxr-xr-x 1 root root 21916 Nov 8 2019 hostname
-rwxr-xr-x 1 root root 83980 Sep 23 2020 ln
-rwxr-xr-x 1 root root 55572 Feb 8 2020 login
-rwxr-xr-x 1 root root 153964 Sep 23 2020 ls
-rwxr-xr-x 1 root root 153124 Feb 8 04:38 lsblk
-rwxr-xr-x 1 root root 96328 Sep 23 2020 mkdir
-rwxr-xr-x 1 root root 79912 Sep 23 2020 mknod
-rwxr-xr-x 1 root root 47048 Sep 23 2020 mktemp
-rwxr-xr-x 1 root root 58920 Feb 8 04:38 more
-rwsr-xr-x 1 root root 50720 Feb 8 04:38 mount
-rwxr-xr-x 1 root root 13856 Feb 8 04:38 mountpoint
-rwxr-xr-x 1 root root 157996 Sep 23 2020 mv
lrwxrwxrwx 1 root root 8 Nov 8 2019 nisdomainname -> hostname
lrwxrwxrwx 1 root root 14 Apr 19 05:38 pidof -> /sbin/killall5
-rwxr-xr-x 1 root root 38824 Sep 23 2020 pwd
lrwxrwxrwx 1 root root 4 Feb 25 10:57 rbash -> bash
-rwxr-xr-x 1 root root 46984 Sep 23 2020 readlink
-rwxr-xr-x 1 root root 75720 Sep 23 2020 rm
-rwxr-xr-x 1 root root 46984 Sep 23 2020 rmdir
-rwxr-xr-x 1 root root 22292 Sep 28 2020 run-parts
-rwxr-xr-x 1 root root 125036 Dec 23 2018 sed
lrwxrwxrwx 1 root root 4 May 30 23:49 sh -> bash
lrwxrwxrwx 1 root root 4 May 28 23:26 sh.distrib -> dash
-rwxr-xr-x 1 root root 34696 Sep 23 2020 sleep
-rwxr-xr-x 1 root root 83880 Sep 23 2020 stty
-rwsr-xr-x 1 root root 79396 Feb 8 04:38 su
-rwxr-xr-x 1 root root 34696 Sep 23 2020 sync
-rwxr-xr-x 1 root root 602584 Feb 17 23:55 tar
-rwxr-xr-x 1 root root 13860 Sep 28 2020 tempfile
-rwxr-xr-x 1 root root 108520 Sep 23 2020 touch
-rwxr-xr-x 1 root root 34664 Sep 23 2020 true
-rwxr-xr-x 1 root root 17768 Feb 27 06:12 ulockmgr_server
-rwsr-xr-x 1 root root 30236 Feb 8 04:38 umount
-rwxr-xr-x 1 root root 34664 Sep 23 2020 uname
-rwxr-xr-x 2 root root 2346 Mar 3 13:30 uncompress
-rwxr-xr-x 1 root root 153964 Sep 23 2020 vdir
-rwxr-xr-x 1 root root 63024 Feb 8 04:38 wdctl
lrwxrwxrwx 1 root root 8 Nov 8 2019 ypdomainname -> hostname
-rwxr-xr-x 1 root root 1984 Mar 3 13:30 zcat
-rwxr-xr-x 1 root root 1678 Mar 3 13:30 zcmp
-rwxr-xr-x 1 root root 5880 Mar 3 13:30 zdiff
-rwxr-xr-x 1 root root 29 Mar 3 13:30 zegrep
-rwxr-xr-x 1 root root 29 Mar 3 13:30 zfgrep
-rwxr-xr-x 1 root root 2081 Mar 3 13:30 zforce
-rwxr-xr-x 1 root root 7585 Mar 3 13:30 zgrep
-rwxr-xr-x 1 root root 2206 Mar 3 13:30 zless
-rwxr-xr-x 1 root root 1842 Mar 3 13:30 zmore
-rwxr-xr-x 1 root root 4553 Mar 3 13:30 znew
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: i386
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper (>= 12~), debhelper-compat (= 13), default-jdk-headless, javahelper, help2man, zlib1g-dev, libsimde-dev, maven-repo-helper
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19674 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however:
Package debhelper is not installed.
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on default-jdk-headless; however:
Package default-jdk-headless is not installed.
pbuilder-satisfydepends-dummy depends on javahelper; however:
Package javahelper is not installed.
pbuilder-satisfydepends-dummy depends on help2man; however:
Package help2man is not installed.
pbuilder-satisfydepends-dummy depends on zlib1g-dev; however:
Package zlib1g-dev is not installed.
pbuilder-satisfydepends-dummy depends on libsimde-dev; however:
Package libsimde-dev is not installed.
pbuilder-satisfydepends-dummy depends on maven-repo-helper; however:
Package maven-repo-helper is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gnupg-utils{a} gpg{a} gpg-agent{a} gpg-wks-client{a} gpg-wks-server{a} gpgconf{a} gpgsm{a} groff-base{a} help2man{a} intltool-debian{a} java-common{a} javahelper{a} libarchive-zip-perl{a} libasound2{a} libasound2-data{a} libassuan0{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libb-hooks-op-check-perl{a} libbrotli1{a} libclass-method-modifiers-perl{a} libcups2{a} libdbus-1-3{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libexpat1{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu67{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libjpeg62-turbo{a} libksba8{a} liblcms2-2{a} libldap-2.4-2{a} liblocale-gettext-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmodule-runtime-perl{a} libmoo-perl{a} libmpdec3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libnpth0{a} libnspr4{a} libnss3{a} libparams-classify-perl{a} libpcsclite1{a} libpipeline1{a} libpng16-16{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsimde-dev{a} libstrictures-perl{a} libsub-override-perl{a} libsub-quote-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} maven-repo-helper{a} media-types{a} netbase{a} openjdk-11-jdk-headless{a} openjdk-11-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} python3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} ucf{a} wdiff{a} zlib1g-dev{a}
The following packages are RECOMMENDED but will NOT be installed:
alsa-topology-conf alsa-ucm-conf curl dbus debian-keyring dput dput-ng dupload equivs libarchive-cpio-perl libclass-xsaccessor-perl libclone-perl libdata-dump-perl libdistro-info-perl libgit-wrapper-perl libgitlab-api-v4-perl libglib2.0-data libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libsub-name-perl licensecheck lintian lynx pristine-tar python3-apt python3-debian python3-magic python3-requests python3-unidiff python3-xdg shared-mime-info strace unzip wget xdg-user-dirs
0 packages upgraded, 139 newly installed, 0 to remove and 0 not upgraded.
Need to get 370 MB of archives. After unpacking 604 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB]
Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB]
Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB]
Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB]
Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB]
Get: 6 http://deb.debian.org/debian bullseye/main i386 liblocale-gettext-perl i386 1.07-4+b1 [19.4 kB]
Get: 7 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB]
Get: 8 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB]
Get: 9 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB]
Get: 10 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB]
Get: 11 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB]
Get: 12 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB]
Get: 13 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB]
Get: 14 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB]
Get: 15 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB]
Get: 16 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB]
Get: 17 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB]
Get: 18 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB]
Get: 19 http://deb.debian.org/debian bullseye/main i386 netbase all 6.3 [19.9 kB]
Get: 20 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB]
Get: 21 http://deb.debian.org/debian bullseye/main i386 openssl i386 1.1.1k-1 [860 kB]
Get: 22 http://deb.debian.org/debian bullseye/main i386 ca-certificates all 20210119 [158 kB]
Get: 23 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB]
Get: 24 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB]
Get: 25 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB]
Get: 26 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB]
Get: 27 http://deb.debian.org/debian bullseye/main i386 ucf all 3.0043 [74.0 kB]
Get: 28 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB]
Get: 29 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB]
Get: 30 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB]
Get: 31 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB]
Get: 32 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB]
Get: 33 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB]
Get: 34 http://deb.debian.org/debian bullseye/main i386 java-common all 0.72 [14.5 kB]
Get: 35 http://deb.debian.org/debian bullseye/main i386 libavahi-common-data i386 0.8-5 [123 kB]
Get: 36 http://deb.debian.org/debian bullseye/main i386 libavahi-common3 i386 0.8-5 [60.1 kB]
Get: 37 http://deb.debian.org/debian bullseye/main i386 libdbus-1-3 i386 1.12.20-2 [232 kB]
Get: 38 http://deb.debian.org/debian bullseye/main i386 libavahi-client3 i386 0.8-5 [64.3 kB]
Get: 39 http://deb.debian.org/debian bullseye/main i386 libcups2 i386 2.3.3op2-3 [367 kB]
Get: 40 http://deb.debian.org/debian bullseye/main i386 liblcms2-2 i386 2.12~rc1-2 [161 kB]
Get: 41 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB]
Get: 42 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB]
Get: 43 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB]
Get: 44 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1 [429 kB]
Get: 45 http://deb.debian.org/debian bullseye/main i386 fonts-dejavu-core all 2.37-2 [1069 kB]
Get: 46 http://deb.debian.org/debian bullseye/main i386 fontconfig-config all 2.13.1-4.2 [281 kB]
Get: 47 http://deb.debian.org/debian bullseye/main i386 libfontconfig1 i386 2.13.1-4.2 [358 kB]
Get: 48 http://deb.debian.org/debian bullseye/main i386 libnspr4 i386 2:4.29-1 [122 kB]
Get: 49 http://deb.debian.org/debian bullseye/main i386 libnss3 i386 2:3.61-1 [1384 kB]
Get: 50 http://deb.debian.org/debian bullseye/main i386 libasound2-data all 1.2.4-1.1 [38.2 kB]
Get: 51 http://deb.debian.org/debian bullseye/main i386 libasound2 i386 1.2.4-1.1 [379 kB]
Get: 52 http://deb.debian.org/debian bullseye/main i386 libglib2.0-0 i386 2.66.8-1 [1437 kB]
Get: 53 http://deb.debian.org/debian bullseye/main i386 libgraphite2-3 i386 1.3.14-1 [84.0 kB]
Get: 54 http://deb.debian.org/debian bullseye/main i386 libharfbuzz0b i386 2.7.4-1 [1490 kB]
Get: 55 http://deb.debian.org/debian bullseye/main i386 libpcsclite1 i386 1.9.1-1 [61.7 kB]
Get: 56 http://deb.debian.org/debian bullseye/main i386 openjdk-11-jre-headless i386 11.0.11+9-1 [36.9 MB]
Get: 57 http://deb.debian.org/debian bullseye/main i386 default-jre-headless i386 2:1.11-72 [10.9 kB]
Get: 58 http://deb.debian.org/debian bullseye/main i386 ca-certificates-java all 20190909 [15.7 kB]
Get: 59 http://deb.debian.org/debian bullseye/main i386 dctrl-tools i386 2.24-3 [105 kB]
Get: 60 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB]
Get: 61 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB]
Get: 62 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB]
Get: 63 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 64 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB]
Get: 65 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB]
Get: 66 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB]
Get: 67 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB]
Get: 68 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB]
Get: 69 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB]
Get: 70 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB]
Get: 71 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB]
Get: 72 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get: 73 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 74 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB]
Get: 75 http://deb.debian.org/debian bullseye/main i386 openjdk-11-jdk-headless i386 11.0.11+9-1 [287 MB]
Get: 76 http://deb.debian.org/debian bullseye/main i386 default-jdk-headless i386 2:1.11-72 [1100 B]
Get: 77 http://deb.debian.org/debian bullseye/main i386 libassuan0 i386 2.5.3-7.1 [52.7 kB]
Get: 78 http://deb.debian.org/debian bullseye/main i386 gpgconf i386 2.2.27-2 [555 kB]
Get: 79 http://deb.debian.org/debian bullseye/main i386 libksba8 i386 1.5.0-3 [131 kB]
Get: 80 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB]
Get: 81 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB]
Get: 82 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB]
Get: 83 http://deb.debian.org/debian bullseye/main i386 libnpth0 i386 1.6-3 [19.1 kB]
Get: 84 http://deb.debian.org/debian bullseye/main i386 dirmngr i386 2.2.27-2 [790 kB]
Get: 85 http://deb.debian.org/debian bullseye/main i386 gnupg-l10n all 2.2.27-2 [1084 kB]
Get: 86 http://deb.debian.org/debian bullseye/main i386 gnupg-utils i386 2.2.27-2 [952 kB]
Get: 87 http://deb.debian.org/debian bullseye/main i386 gpg i386 2.2.27-2 [969 kB]
Get: 88 http://deb.debian.org/debian bullseye/main i386 pinentry-curses i386 1.1.0-4 [66.5 kB]
Get: 89 http://deb.debian.org/debian bullseye/main i386 gpg-agent i386 2.2.27-2 [690 kB]
Get: 90 http://deb.debian.org/debian bullseye/main i386 gpg-wks-client i386 2.2.27-2 [535 kB]
Get: 91 http://deb.debian.org/debian bullseye/main i386 gpg-wks-server i386 2.2.27-2 [526 kB]
Get: 92 http://deb.debian.org/debian bullseye/main i386 gpgsm i386 2.2.27-2 [666 kB]
Get: 93 http://deb.debian.org/debian bullseye/main i386 gnupg all 2.2.27-2 [825 kB]
Get: 94 http://deb.debian.org/debian bullseye/main i386 libfile-dirlist-perl all 0.05-2 [7444 B]
Get: 95 http://deb.debian.org/debian bullseye/main i386 libfile-which-perl all 1.23-1 [16.6 kB]
Get: 96 http://deb.debian.org/debian bullseye/main i386 libfile-homedir-perl all 1.006-1 [43.8 kB]
Get: 97 http://deb.debian.org/debian bullseye/main i386 libfile-touch-perl all 0.11-1 [9254 B]
Get: 98 http://deb.debian.org/debian bullseye/main i386 libio-pty-perl i386 1:1.15-2 [37.8 kB]
Get: 99 http://deb.debian.org/debian bullseye/main i386 libipc-run-perl all 20200505.0-1 [102 kB]
Get: 100 http://deb.debian.org/debian bullseye/main i386 libclass-method-modifiers-perl all 2.13-1 [19.2 kB]
Get: 101 http://deb.debian.org/debian bullseye/main i386 libb-hooks-op-check-perl i386 0.22-1+b3 [11.4 kB]
Get: 102 http://deb.debian.org/debian bullseye/main i386 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB]
Get: 103 http://deb.debian.org/debian bullseye/main i386 libdevel-callchecker-perl i386 0.008-1+b2 [15.9 kB]
Get: 104 http://deb.debian.org/debian bullseye/main i386 libparams-classify-perl i386 0.015-1+b3 [26.4 kB]
Get: 105 http://deb.debian.org/debian bullseye/main i386 libmodule-runtime-perl all 0.016-1 [19.4 kB]
Get: 106 http://deb.debian.org/debian bullseye/main i386 libimport-into-perl all 1.002005-1 [11.6 kB]
Get: 107 http://deb.debian.org/debian bullseye/main i386 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get: 108 http://deb.debian.org/debian bullseye/main i386 libstrictures-perl all 2.000006-1 [18.6 kB]
Get: 109 http://deb.debian.org/debian bullseye/main i386 libsub-quote-perl all 2.006006-1 [21.0 kB]
Get: 110 http://deb.debian.org/debian bullseye/main i386 libmoo-perl all 2.004004-1 [59.9 kB]
Get: 111 http://deb.debian.org/debian bullseye/main i386 libencode-locale-perl all 1.05-1.1 [13.2 kB]
Get: 112 http://deb.debian.org/debian bullseye/main i386 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 113 http://deb.debian.org/debian bullseye/main i386 libhttp-date-perl all 6.05-1 [10.4 kB]
Get: 114 http://deb.debian.org/debian bullseye/main i386 libfile-listing-perl all 6.14-1 [12.4 kB]
Get: 115 http://deb.debian.org/debian bullseye/main i386 libhtml-tagset-perl all 3.20-4 [13.0 kB]
Get: 116 http://deb.debian.org/debian bullseye/main i386 liburi-perl all 5.08-1 [90.6 kB]
Get: 117 http://deb.debian.org/debian bullseye/main i386 libhtml-parser-perl i386 3.75-1+b1 [106 kB]
Get: 118 http://deb.debian.org/debian bullseye/main i386 libhtml-tree-perl all 5.07-2 [213 kB]
Get: 119 http://deb.debian.org/debian bullseye/main i386 libio-html-perl all 1.004-2 [16.1 kB]
Get: 120 http://deb.debian.org/debian bullseye/main i386 liblwp-mediatypes-perl all 6.04-1 [19.9 kB]
Get: 121 http://deb.debian.org/debian bullseye/main i386 libhttp-message-perl all 6.28-1 [79.6 kB]
Get: 122 http://deb.debian.org/debian bullseye/main i386 libhttp-cookies-perl all 6.10-1 [19.6 kB]
Get: 123 http://deb.debian.org/debian bullseye/main i386 libhttp-negotiate-perl all 6.01-1 [12.8 kB]
Get: 124 http://deb.debian.org/debian bullseye/main i386 perl-openssl-defaults i386 5 [7360 B]
Get: 125 http://deb.debian.org/debian bullseye/main i386 libnet-ssleay-perl i386 1.88-3+b1 [328 kB]
Get: 126 http://deb.debian.org/debian bullseye/main i386 libio-socket-ssl-perl all 2.069-1 [215 kB]
Get: 127 http://deb.debian.org/debian bullseye/main i386 libnet-http-perl all 6.20-1 [25.1 kB]
Get: 128 http://deb.debian.org/debian bullseye/main i386 liblwp-protocol-https-perl all 6.10-1 [12.2 kB]
Get: 129 http://deb.debian.org/debian bullseye/main i386 libtry-tiny-perl all 0.30-1 [23.3 kB]
Get: 130 http://deb.debian.org/debian bullseye/main i386 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 131 http://deb.debian.org/debian bullseye/main i386 libwww-perl all 6.52-1 [192 kB]
Get: 132 http://deb.debian.org/debian bullseye/main i386 patchutils i386 0.4.2-1 [79.6 kB]
Get: 133 http://deb.debian.org/debian bullseye/main i386 wdiff i386 1.2.2-2+b1 [123 kB]
Get: 134 http://deb.debian.org/debian bullseye/main i386 devscripts i386 2.21.2 [1092 kB]
Get: 135 http://deb.debian.org/debian bullseye/main i386 help2man i386 1.48.1 [190 kB]
Get: 136 http://deb.debian.org/debian bullseye/main i386 javahelper all 0.78 [97.2 kB]
Get: 137 http://deb.debian.org/debian bullseye/main i386 libsimde-dev all 0.7.2-4 [259 kB]
Get: 138 http://deb.debian.org/debian bullseye/main i386 maven-repo-helper all 1.10 [142 kB]
Get: 139 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB]
Fetched 370 MB in 31s (12.0 MB/s)
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package bsdextrautils.
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Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ...
Unpacking bsdextrautils (2.36.1-7) ...
Selecting previously unselected package libuchardet0:i386.
Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ...
Unpacking libuchardet0:i386 (0.0.7-1) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ...
Unpacking groff-base (1.22.4-6) ...
Selecting previously unselected package libpipeline1:i386.
Preparing to unpack .../3-libpipeline1_1.5.3-1_i386.deb ...
Unpacking libpipeline1:i386 (1.5.3-1) ...
Selecting previously unselected package man-db.
Preparing to unpack .../4-man-db_2.9.4-2_i386.deb ...
Unpacking man-db (2.9.4-2) ...
Selecting previously unselected package liblocale-gettext-perl.
Preparing to unpack .../5-liblocale-gettext-perl_1.07-4+b1_i386.deb ...
Unpacking liblocale-gettext-perl (1.07-4+b1) ...
Selecting previously unselected package libpython3.9-minimal:i386.
Preparing to unpack .../6-libpython3.9-minimal_3.9.2-1_i386.deb ...
Unpacking libpython3.9-minimal:i386 (3.9.2-1) ...
Selecting previously unselected package libexpat1:i386.
Preparing to unpack .../7-libexpat1_2.2.10-2_i386.deb ...
Unpacking libexpat1:i386 (2.2.10-2) ...
Selecting previously unselected package python3.9-minimal.
Preparing to unpack .../8-python3.9-minimal_3.9.2-1_i386.deb ...
Unpacking python3.9-minimal (3.9.2-1) ...
Setting up libpython3.9-minimal:i386 (3.9.2-1) ...
Setting up libexpat1:i386 (2.2.10-2) ...
Setting up python3.9-minimal (3.9.2-1) ...
Selecting previously unselected package python3-minimal.
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Preparing to unpack .../0-python3-minimal_3.9.2-3_i386.deb ...
Unpacking python3-minimal (3.9.2-3) ...
Selecting previously unselected package media-types.
Preparing to unpack .../1-media-types_4.0.0_all.deb ...
Unpacking media-types (4.0.0) ...
Selecting previously unselected package libmpdec3:i386.
Preparing to unpack .../2-libmpdec3_2.5.1-1_i386.deb ...
Unpacking libmpdec3:i386 (2.5.1-1) ...
Selecting previously unselected package readline-common.
Preparing to unpack .../3-readline-common_8.1-1_all.deb ...
Unpacking readline-common (8.1-1) ...
Selecting previously unselected package libreadline8:i386.
Preparing to unpack .../4-libreadline8_8.1-1_i386.deb ...
Unpacking libreadline8:i386 (8.1-1) ...
Selecting previously unselected package libpython3.9-stdlib:i386.
Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_i386.deb ...
Unpacking libpython3.9-stdlib:i386 (3.9.2-1) ...
Selecting previously unselected package python3.9.
Preparing to unpack .../6-python3.9_3.9.2-1_i386.deb ...
Unpacking python3.9 (3.9.2-1) ...
Selecting previously unselected package libpython3-stdlib:i386.
Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_i386.deb ...
Unpacking libpython3-stdlib:i386 (3.9.2-3) ...
Setting up python3-minimal (3.9.2-3) ...
Selecting previously unselected package python3.
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Preparing to unpack .../000-python3_3.9.2-3_i386.deb ...
Unpacking python3 (3.9.2-3) ...
Selecting previously unselected package netbase.
Preparing to unpack .../001-netbase_6.3_all.deb ...
Unpacking netbase (6.3) ...
Selecting previously unselected package sensible-utils.
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Unpacking sensible-utils (0.0.14) ...
Selecting previously unselected package openssl.
Preparing to unpack .../003-openssl_1.1.1k-1_i386.deb ...
Unpacking openssl (1.1.1k-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../004-ca-certificates_20210119_all.deb ...
Unpacking ca-certificates (20210119) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../005-libmagic-mgc_1%3a5.39-3_i386.deb ...
Unpacking libmagic-mgc (1:5.39-3) ...
Selecting previously unselected package libmagic1:i386.
Preparing to unpack .../006-libmagic1_1%3a5.39-3_i386.deb ...
Unpacking libmagic1:i386 (1:5.39-3) ...
Selecting previously unselected package file.
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Unpacking file (1:5.39-3) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../008-gettext-base_0.21-4_i386.deb ...
Unpacking gettext-base (0.21-4) ...
Selecting previously unselected package ucf.
Preparing to unpack .../009-ucf_3.0043_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0043) ...
Selecting previously unselected package libsigsegv2:i386.
Preparing to unpack .../010-libsigsegv2_2.13-1_i386.deb ...
Unpacking libsigsegv2:i386 (2.13-1) ...
Selecting previously unselected package m4.
Preparing to unpack .../011-m4_1.4.18-5_i386.deb ...
Unpacking m4 (1.4.18-5) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../012-autoconf_2.69-14_all.deb ...
Unpacking autoconf (2.69-14) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../013-autotools-dev_20180224.1+nmu1_all.deb ...
Unpacking autotools-dev (20180224.1+nmu1) ...
Selecting previously unselected package automake.
Preparing to unpack .../014-automake_1%3a1.16.3-2_all.deb ...
Unpacking automake (1:1.16.3-2) ...
Selecting previously unselected package autopoint.
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Unpacking autopoint (0.21-4) ...
Selecting previously unselected package java-common.
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Unpacking java-common (0.72) ...
Selecting previously unselected package libavahi-common-data:i386.
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Unpacking libavahi-common-data:i386 (0.8-5) ...
Selecting previously unselected package libavahi-common3:i386.
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Unpacking libavahi-common3:i386 (0.8-5) ...
Selecting previously unselected package libdbus-1-3:i386.
Preparing to unpack .../019-libdbus-1-3_1.12.20-2_i386.deb ...
Unpacking libdbus-1-3:i386 (1.12.20-2) ...
Selecting previously unselected package libavahi-client3:i386.
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Unpacking libavahi-client3:i386 (0.8-5) ...
Selecting previously unselected package libcups2:i386.
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Unpacking libcups2:i386 (2.3.3op2-3) ...
Selecting previously unselected package liblcms2-2:i386.
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Unpacking liblcms2-2:i386 (2.12~rc1-2) ...
Selecting previously unselected package libjpeg62-turbo:i386.
Preparing to unpack .../023-libjpeg62-turbo_1%3a2.0.6-4_i386.deb ...
Unpacking libjpeg62-turbo:i386 (1:2.0.6-4) ...
Selecting previously unselected package libbrotli1:i386.
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Unpacking libbrotli1:i386 (1.0.9-2+b2) ...
Selecting previously unselected package libpng16-16:i386.
Preparing to unpack .../025-libpng16-16_1.6.37-3_i386.deb ...
Unpacking libpng16-16:i386 (1.6.37-3) ...
Selecting previously unselected package libfreetype6:i386.
Preparing to unpack .../026-libfreetype6_2.10.4+dfsg-1_i386.deb ...
Unpacking libfreetype6:i386 (2.10.4+dfsg-1) ...
Selecting previously unselected package fonts-dejavu-core.
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Unpacking fonts-dejavu-core (2.37-2) ...
Selecting previously unselected package fontconfig-config.
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Unpacking fontconfig-config (2.13.1-4.2) ...
Selecting previously unselected package libfontconfig1:i386.
Preparing to unpack .../029-libfontconfig1_2.13.1-4.2_i386.deb ...
Unpacking libfontconfig1:i386 (2.13.1-4.2) ...
Selecting previously unselected package libnspr4:i386.
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Unpacking libnspr4:i386 (2:4.29-1) ...
Selecting previously unselected package libnss3:i386.
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Unpacking libnss3:i386 (2:3.61-1) ...
Selecting previously unselected package libasound2-data.
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Unpacking libasound2-data (1.2.4-1.1) ...
Selecting previously unselected package libasound2:i386.
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Unpacking libasound2:i386 (1.2.4-1.1) ...
Selecting previously unselected package libglib2.0-0:i386.
Preparing to unpack .../034-libglib2.0-0_2.66.8-1_i386.deb ...
Unpacking libglib2.0-0:i386 (2.66.8-1) ...
Selecting previously unselected package libgraphite2-3:i386.
Preparing to unpack .../035-libgraphite2-3_1.3.14-1_i386.deb ...
Unpacking libgraphite2-3:i386 (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:i386.
Preparing to unpack .../036-libharfbuzz0b_2.7.4-1_i386.deb ...
Unpacking libharfbuzz0b:i386 (2.7.4-1) ...
Selecting previously unselected package libpcsclite1:i386.
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Unpacking libpcsclite1:i386 (1.9.1-1) ...
Selecting previously unselected package openjdk-11-jre-headless:i386.
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Unpacking openjdk-11-jre-headless:i386 (11.0.11+9-1) ...
Selecting previously unselected package default-jre-headless.
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Unpacking default-jre-headless (2:1.11-72) ...
Selecting previously unselected package ca-certificates-java.
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Unpacking ca-certificates-java (20190909) ...
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Unpacking dctrl-tools (2.24-3) ...
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Unpacking libdebhelper-perl (13.3.4) ...
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Unpacking libtool (2.4.6-15) ...
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No schema files found: doing nothing.
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129 added, 0 removed; done.
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update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/java to provide /usr/bin/java (java) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode
OpenJDK Client VM warning: Ignoring option PermSize; support was removed in 8.0
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Setting up openjdk-11-jdk-headless:i386 (11.0.11+9-1) ...
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/rmic to provide /usr/bin/rmic (rmic) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-11-openjdk-i386/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jdk-headless (2:1.11-72) ...
Setting up devscripts (2.21.2) ...
Setting up javahelper (0.78) ...
Setting up ca-certificates-java (20190909) ...
head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:Izenpe.com.pem
Adding debian:GTS_Root_R4.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:Security_Communication_Root_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Hongkong_Post_Root_CA_1.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:Certigna.pem
Adding debian:ACCVRAIZ1.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:Trustis_FPS_Root_CA.pem
Adding debian:Sonera_Class_2_Root_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:VeriSign_Universal_Root_Certification_Authority.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:QuoVadis_Root_CA.pem
Adding debian:Global_Chambersign_Root_-_2008.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:TrustCor_RootCert_CA-1.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:Chambers_of_Commerce_Root_-_2008.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:GTS_Root_R2.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:Cybertrust_Global_Root.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:TrustCor_ECA-1.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:TrustCor_RootCert_CA-2.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:Network_Solutions_Certificate_Authority.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:DST_Root_CA_X3.pem
Adding debian:E-Tugra_Certification_Authority.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:EC-ACC.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:GlobalSign_Root_CA_-_R2.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:GTS_Root_R1.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
done.
Setting up liblwp-protocol-https-perl (6.10-1) ...
Processing triggers for libc-bin (2.31-12) ...
Processing triggers for ca-certificates (20210119) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
The following additional packages will be installed:
libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl
The following NEW packages will be installed:
libfile-find-rule-perl libnumber-compare-perl libtext-glob-perl usrmerge
0 upgraded, 4 newly installed, 0 to remove and 0 not upgraded.
Need to get 59.5 kB of archives.
After this operation, 157 kB of additional disk space will be used.
Get:1 http://deb.debian.org/debian bullseye/main i386 libnumber-compare-perl all 0.03-1.1 [6956 B]
Get:2 http://deb.debian.org/debian bullseye/main i386 libtext-glob-perl all 0.11-1 [8888 B]
Get:3 http://deb.debian.org/debian bullseye/main i386 libfile-find-rule-perl all 0.34-1 [30.6 kB]
Get:4 http://deb.debian.org/debian bullseye/main i386 usrmerge all 25 [13.0 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 59.5 kB in 0s (995 kB/s)
Selecting previously unselected package libnumber-compare-perl.
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(Reading database ... 25646 files and directories currently installed.)
Preparing to unpack .../libnumber-compare-perl_0.03-1.1_all.deb ...
Unpacking libnumber-compare-perl (0.03-1.1) ...
Selecting previously unselected package libtext-glob-perl.
Preparing to unpack .../libtext-glob-perl_0.11-1_all.deb ...
Unpacking libtext-glob-perl (0.11-1) ...
Selecting previously unselected package libfile-find-rule-perl.
Preparing to unpack .../libfile-find-rule-perl_0.34-1_all.deb ...
Unpacking libfile-find-rule-perl (0.34-1) ...
Selecting previously unselected package usrmerge.
Preparing to unpack .../archives/usrmerge_25_all.deb ...
Unpacking usrmerge (25) ...
Setting up libtext-glob-perl (0.11-1) ...
Setting up libnumber-compare-perl (0.03-1.1) ...
Setting up libfile-find-rule-perl (0.34-1) ...
Setting up usrmerge (25) ...
The system has been successfully converted.
Processing triggers for man-db (2.9.4-2) ...
Not building database; man-db/auto-update is not 'true'.
I: Building the package
I: Running cd /build/libssw-1.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b
dpkg-buildpackage: info: source package libssw
dpkg-buildpackage: info: source version 1.1-13
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Sascha Steinbiss <satta@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture i386
debian/rules clean
dh clean --with javahelper --with jh_maven_repo_helper
debian/rules override_dh_auto_clean
make[1]: Entering directory '/build/libssw-1.1'
rm -f debian/libssw*install debian/libssw*links debian/ssw-align.1
dh_auto_clean --sourcedirectory src
cd src && make -j10 clean
make[2]: Entering directory '/build/libssw-1.1/src'
rm -f ssw.o ssw_cpp.o ssw-align libssw.so.0 example_c example_cpp libsswjni.so *.jar ssw/Aligner.class ssw/Alignment.class *~ libssw.a
make[2]: Leaving directory '/build/libssw-1.1/src'
make[1]: Leaving directory '/build/libssw-1.1'
jh_clean
mh_clean
dh_clean
debian/rules binary
dh binary --with javahelper --with jh_maven_repo_helper
dh_update_autotools_config
dh_autoreconf
jh_linkjars
debian/rules override_dh_auto_build
make[1]: Entering directory '/build/libssw-1.1'
dh_auto_build --sourcedirectory src -- default java
cd src && make -j10 "INSTALL=install --strip-program=true" default java
make[2]: Entering directory '/build/libssw-1.1/src'
g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -fPIC -shared -rdynamic -Wl,-soname,libssw.so.0 -o libssw.so.0 ssw.c ssw.h ssw_cpp.h ssw_cpp.cpp -Wl,-z,relro -Wl,-z,now
cc -c -o ssw.o ssw.c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
g++ -c -o ssw_cpp.o ssw_cpp.cpp -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
javac ssw/Aligner.java
javac ssw/Alignment.java
cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -I"/include" -I"/include/linux" -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux -fPIC -shared -rdynamic -o libsswjni.so sswjni.c ssw.c -Wl,-z,relro -Wl,-z,now
jar cvf ssw.jar ssw/Aligner.class ssw/Alignment.class
added manifest
adding: ssw/Aligner.class(in = 2486) (out= 1520)(deflated 38%)
adding: ssw/Alignment.class(in = 1029) (out= 596)(deflated 42%)
ar rcs libssw.a ssw.o ssw_cpp.o
cc -o example_c ssw.o example.c -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -lm -lz -Wl,-z,relro -Wl,-z,now
g++ -o example_cpp example.cpp ssw.o ssw_cpp.o -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -lm -lz -Wl,-z,relro -Wl,-z,now
cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -fdebug-prefix-map=/build/libssw-1.1=. -fstack-protector-strong -Wformat -Werror=format-security -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3 -o ssw-align main.c kseq.h -L. -lssw -lm -lz -Wl,-z,relro -Wl,-z,now
make[2]: Leaving directory '/build/libssw-1.1/src'
make[1]: Leaving directory '/build/libssw-1.1'
debian/rules override_dh_auto_test
make[1]: Entering directory '/build/libssw-1.1'
LD_PRELOAD="$LD_PRELOAD /build/libssw-1.1/src/libssw.so" src/ssw-align -c demo/ref.fa demo/1k.fa
ERROR: ld.so: object '/build/libssw-1.1/src/libssw.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored.
target_name: chr1
query_name: chr1
optimal_alignment_score: 2002 suboptimal_alignment_score: 1000 strand: + target_begin: 1 target_end: 1001 query_begin: 1 query_end: 1001
Target: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 1 TAAACAGGTTAATCGCCACGACATAGTAGTATTTAGAGTTACTAGTAAGCCTGATGCCAC 60
Target: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 61 TACACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120
Target: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 121 AAACATAGGAAAAAATTATTTAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTTA 180
Target: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 181 TAAGAGTGTTTTCCTATTGTTTTCAGTGTAGGACTCACTGTTCTAAATAACTGGGACACC 240
Target: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 241 CAAGGATTCTGTAAAATGCCATCCAGTTATCATTTATATTCCCTAACTCAAAATTCATTC 300
Target: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 301 ACATGTATTCATTTTTTTCTAAACAAATTAGCATGTAGAATTCTGGTTAAAATTTGGCAT 360
Target: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 361 AGAACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGAATG 420
Target: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 421 GTGATTTAACAAAGGATAATAAAGTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC 480
Target: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 481 TGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGAGAGAAAATTTCACT 540
Target: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 541 CCCTCCATAAATCTCACAGTATTCTTTTCTTTTTCCTTTCCTTTCCTTGCTCTTCTTTCT 600
Target: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 601 CTCCTATTGCTTTCCTTTCATTTCCTTCTCATAAAAGAAAAATAACAATATAGAAAATAA 660
Target: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 661 CAAAATATAGATGGTCAACCTTTTTAATATTAAGGTTACCTAAAATGCCATTATCCAAAG 720
Target: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 721 TGGTTCTCTAGAGATGCTGATGTATATACTTACATATTTTACAGTGTATTCAAATAAAGA 780
Target: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 781 GTATATTACATAAGACATATCCTTTTGTAACCAACTTTTGTCATTAACAATTTACTGGAC 840
Target: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 841 TTGTCAACAAACCTAAATCTGTATCGTCTATAATGGCTACGTTCATTTTGGTATGAATCT 900
Target: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Query: 901 TAATTACCCCTTTCTGCATTATTTAATGATTTTCTCATATGTCACTCTTAAATGTACTTC 960
Target: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001
|||||||||||||||||||||||||||||||||||||||||
Query: 961 TAATTTTTCACTTTACATCACATAATGAATGGATCCAAATA 1001
target_name: chr2
query_name: chr1
optimal_alignment_score: 312 suboptimal_alignment_score: 311 strand: + target_begin: 4437430 target_end: 4438470 query_begin: 9 query_end: 971
Target: 4437430 TTGAT-TCCACAGATTCCAATAGAATAGTTTGAAGATGGAACAATTGAGAATTCTGAATG 4437488
||*|| *|||| || | |||| ||||*|**||| |**||*|*| ||**||| |||
Query: 9 TTAATCGCCAC-GA--C--ATAG--TAGTATTTAGA-GTTACTAGT---AAGCCTG-ATG 56
Target: 4437489 ---CTAAGCTAAT--TAGATATGTTTTCTTTGAAGGAAAACTACATTGTATTATTTTGCC 4437543
|||**| ||| |||*| | ||*||||| |||| | *|||||*|*|||**|
Query: 57 CCACTACAC-AATTCTAGCT-T-TTCTCTTT--AGGA----T-GATTGTTTCATTCAG-- 104
Target: 4437544 TCCTCCCTCCTCCTAGAAGCCTT----TAAAATTCATGCATCATTTTAAAAGTTTTGAAA 4437599
||*|**|| ||**|||||**|*| *|||||| || *|*||**||||| ||| ||
Query: 105 TCTTATCT-CTTTTAGAAAACATAGGAAAAAATT-AT--TTAATAATAAAA-TTT--AA- 156
Target: 4437600 TTTTTCAAGATTATGTTTAA-GTAT--ATTA-AATATTTTGTTCAGTCATCCCAATTAGT 4437655
||**||| | ||| || |||| *||| ||*| *|||| |*||*||| ||
Query: 157 -TTGGCAA-A--ATG---AAGGTATGGCTTATAAGA--GTGTT------TTCCTATT-GT 200
Target: 4437656 TTTCAATG--G----CCCT-TTCCATTTAAAGAGTTTGGACATTCCATATAAAAAAG-AC 4437707
|||||*|| | |*|| ||| ||||*|**|*||||| *||| |**|****| |*
Query: 201 TTTCAGTGTAGGACTCACTGTTC----TAAATAACTGGGACA-CCCA-AGGATTCTGTAA 254
Target: 4437708 AATGTCATCTACA-TTTTC-TTTGTTTT--CT---T---AATT-AT----ATCTTTTCCT 4437752
||||*|||| || ||*|| |||*|*|| || | |||| || ||*|*|||*|
Query: 255 AATGCCATC--CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCACATGTATTCAT 312
Target: 4437753 TTTTACAAATTTCTTAA-AAA-TAG-GTGTAAGATCTCTGATTTAACCTATGTGCGT--- 4437806
||| |||||*|| ||| ||| *||| |||**|||| *||||**|*|| ||*|
Query: 313 TTT------TTTCTAAACAAATTAGCATGT-AGAATTCTG-GTTAAAATTTG-GCATAGA 363
Target: 4437807 -C------TTAATTTTTCA----GCTTC---T--CTGTCATT---TTATT-AGATGTTTT 4437846
| *||*||||||| ||**| | |||||||| |*||| |||
Query: 364 ACACCCGGGTATTTTTTCATAATGCACCCAATAACTGTCATTCACTAATTGAGA------ 417
Target: 4437847 TATTGT-TTTTAA------TTACTAAATTAATCTTAATCTATG-CTTATTATATCATTCT 4437898
||*|| *||||| *||*||||*|*|| **||*|*||| |**|**|*|||**|||
Query: 418 -ATGGTGATTTAACAAAGGATAATAAAGTTAT-GAAACCAATGCCACAAAACATCTGTCT 475
Target: 4437899 CCATTAC--GT-TATGGATACAACAACT-TG-GTGAATGTTTCTG----AGATTAACACT 4437949
| |*|| || |*||**| *| || |||**|||*|*|| |||***|*|**
Query: 476 C--TAACTGGTGTGTGTGT-------GTGTGTGTGTGTGTGTGTGTGTAAGAGGGAGAGA 526
Target: 4437950 AAAAATATTTAACAATCTCTCTCATTTTTATC----TTTTC-TTTCTTTTTCTCTTTGTC 4438004
*|*||*|||| ||*||*||| |||***|*|| |*||| |||||||||| |||| *|
Query: 527 GAGAAAATTT--CACTCCCTC-CATAAATCTCACAGTATTCTTTTCTTTTTC-CTTT-CC 581
Target: 4438005 TTT-CTCACTCTCTATTTATCCTGTTACATCTTTGCTTCTATCTCTTTCTCTGTTTTTTT 4438063
||| ||**|||| |*|||*| ||**|| |||||| || ||||| *|||**||
Query: 582 TTTCCTTGCTCT-TCTTTCT-CTCCTA-----TTGCTT---TC-CTTTC---ATTTCCTT 627
Target: 4438064 TTTTTAATATTTAAATAATGCTTCTGTCTGAGGAGGTTAAGAAGTGAAAGAAGACATTGT 4438123
*|**|||*|***|||||| |**|*| || || || | ||*||*|*||
Query: 628 CTCATAAAAGAAAAATAA-----CAATAT-AG------AA-AA-T--AACAAAATAT--- 668
Target: 4438124 GAGATGGAGAATCTTTATTAAGATAGAAG---AC--AAAGAGGGGATGAT-----GTGGA 4438173
||||||**||*|||| ||||*|| *||| || ||| |*|**||*|| ||||
Query: 669 -AGATGGTCAACCTTT-TTAATAT-TAAGGTTACCTAAA-ATGCCATTATCCAAAGTGG- 723
Target: 4438174 CACTT-TC-AG-GATG-TGGAATGGT---TACATACATTATT---CTGT-TA-TCACAAG 4438221
|| || || |||| || || || |||*|||| |||| |*|| || ||| ||
Query: 724 ---TTCTCTAGAGATGCTG--AT-GTATATACTTACA-TATTTTACAGTGTATTCA-AA- 774
Target: 4438222 GTTAGCTAA-ACTCTCTTTCATAA-A-ATCTCTCTTGTTTCTTACTCCCTAAATCTCAAA 4438278
|| || |*|*|*||*||||| | ||*|| || |||*|*|| | || ||
Query: 775 --TA---AAGAGTATATTACATAAGACATATC-CT--TTTGTAAC-C---AA--CT---- 816
Target: 4438279 TAAGTGACTAAAAAATGCCTGGA--TGACCCCAAACAGTAAGAATAGCTTGTA-GGTCTC 4438335
|**||*|*|||*||*|**||||| ||*|**||||| *|| ||| | |||| *||||*
Query: 817 TTTGTCATTAACAATTTACTGGACTTGTCAACAAAC-CTA--AAT--C-TGTATCGTCTA 870
Target: 4438336 TGAAG---ATGTTATCTTTTGCCCTGGGAAGGTGGATTCCTATACTAACACCTGCACTTG 4438392
|*|*| |*|| ||*||| |||*| ||*|| || ||*|*||*||| ||
Query: 871 TAATGGCTACGT--TCATTT----TGGTA---TGAAT--CT-TAATTACCCCT----TT- 913
Target: 4438393 AAAAGGTGAACAAGATAATTTTGTATTTATTTTCTCACTA--CCACTGCAGGTAGCATGG 4438450
*|| | ||*||| ||*|*||||||||| || *|||| | *|| *|||
Query: 914 -----CTG--C---ATTATT---TAATGATTTTCTCA-TATGTCACT-C--TTA-AATG- 954
Target: 4438451 GACACTTCTTTATTATTCAC 4438470
*||||| |*|||*|||||
Query: 955 --TACTTC-TAATTTTTCAC 971
target_name: chr3
query_name: chr1
optimal_alignment_score: 291 suboptimal_alignment_score: 289 strand: + target_begin: 680970 target_end: 682002 query_begin: 9 query_end: 998
Target: 680970 TTAAATTGTCA--ACATGGTA-TATATGAAATGAATTGGGTTTATAATAGTAAACCAATC 681026
|| |||*|*|| ||||*||| ||| |*| || || ||*||||||*|| |*
Query: 9 TT-AATCGCCACGACATAGTAGTAT-TTA---GA-----GT---TACTAGTAAGCC--TG 53
Target: 681027 TTG-CATTCCTAAAA---TA--AATCCTATTTAG--TTATCGT--------GTGTTATTT 681070
*|| ||*|*| |*|| || **|*||*||||| |*||*|| ||*||| |*
Query: 54 ATGCCACTAC-ACAATTCTAGCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTA-TC 111
Target: 681071 TCTT----AATACAGTGTTGGATTAAGTTTGCTATTTTTTATTTTAAAATTTTACATTAT 681126
|||| ||*||| |*|||**||*| || |||*||**||||| |||| ||
Query: 112 TCTTTTAGAAAACA---TAGGAAAAAAT----TA--TTTAATAATAAAA-TTTA----AT 157
Target: 681127 TTTCTTCAGTGA---TATTGACCTGT---AGTTTTCTTTCATTATACTGTTTTATCAGAT 681180
|**| **|*||| || ||*|*|*| |||*| |||| *||| ||||| |||| |
Query: 158 TGGC-AAAATGAAGGTA-TGGCTTATAAGAGTGT--TTTC-CTAT--TGTTT--TCAG-T 207
Target: 681181 TTAGGTATCAGTGTTAT-AGTTTCT---TCATGAAAGGAAT---TAAGATGTTTTCCTTC 681233
*||||**|||*||||*| |*|**|| *||***|||||*| |||*||| ||*||
Query: 208 GTAGGACTCACTGTTCTAAATAACTGGGACACCCAAGGATTCTGTAAAATG----CCATC 263
Target: 681234 C-CTT-TCA---ATGTT------CTGAATAATCATACAGCAT-TA-TGACTATCTGCCAT 681280
| *|| ||| ||*|| ||*||*|*||||*|| ||| || |*|*|*|*| |
Query: 264 CAGTTATCATTTATATTCCCTAACTCAAAATTCATTCA-CATGTATTCATTTTTT----T 318
Target: 681281 TTAAATC--TTTAGAAT----AATTACCTTGTGAAACTATGTGGGCTTGGTGCTATTTTG 681334
*|||| | *||||*|| |||| ||*||*||| || |*|||*|*|**| | ***|
Query: 319 CTAAA-CAAATTAGCATGTAGAATT--CTGGTTAAA--AT-TTGGCATAGAAC-A-CCCG 370
Target: 681335 TGTAGTATTTATC-TAATTGTTTCCTATA--TTTC-TT--CTA--TGAAATTGGTTGATT 681386
*||| | |||*|| ||| ||***||*||| |*|| || ||| |||*|*||| |||||
Query: 371 GGTA-T-TTTTTCATAA-TGCACCCAATAACTGTCATTCACTAATTGAGAATGG-TGATT 426
Target: 681387 TAATCTTTCTAACACTAATAAGATTAATTTGAGTAAACTTCATTTCTCTAGAAAATAATT 681446
||| |*||***||||||**||| || |||| ||*|*| | |*||||*| |
Query: 427 TAA-----CAAAGGATAATAAAGTTA---TG---AAAC--CAATGC-C-ACAAAACA--T 469
Target: 681447 AATTCATCAAATTAAATCAAATTTGAAATTTGATTTCAAATTTATTTGTGTCAAAGTAA- 681505
***|| || |||*|****|*|| |*|| |*| *|*|*|*|||||****||||
Query: 470 CTGTC-TC----TAACTGGTGTGTG---TGTG-TGT---GTGTGTGTGTGTGTGTGTAAG 517
Target: 681506 A-GGAG-G--------TTTC-CT--GT-CATTTTAAAATTCTC----TGTTGTTTTAATA 681547
| |||| | |||| || *| || |||| |||| |*||*|||| *|*
Query: 518 AGGGAGAGAGAGAAAATTTCACTCCCTCCA---TAAA--TCTCACAGTATTCTTTT-CTT 571
Target: 681548 GTAACTT--GTTT-CTTATTATTTATAACTTTAT---ATATT--TGTACTT---TTTCCT 681596
*|**||| *||| |||**|*|| ||||*| *|||| |*|*||| |||||
Query: 572 TTTCCTTTCCTTTCCTTGCTCTT-----CTTTCTCTCCTATTGCTTTCCTTTCATTTCC- 625
Target: 681597 TTTTTATCAAATG--AACT--GAGTTT------TAAC-----ATCGCAT--TTAA---TT 681636
||*|*|| |||*| ||*| *|*|*| |||| ||*| || |*|| ||
Query: 626 TTCTCAT-AAAAGAAAAATAACAATATAGAAAATAACAAAATATAG-ATGGTCAACCTTT 683
Target: 681637 TTAATTATCTAATCTAAATCTAAAAGCTGATATTTGATTCAA-----TTGTC-AGAAATC 681690
|||| ||| |||**| *|*|||||| ||**||| ||*||| ||*|| |||*||
Query: 684 TTAA-TAT-TAAGGT-TACCTAAAA--TGCCATT--ATCCAAAGTGGTTCTCTAGAGAT- 735
Target: 681691 TCTTAAGTATATTGGGATCAACTTGGAAAAGTAAATTGACTTTAAACAGTACACTT--TA 681748
*||*|*|||||| |||| |*| | ||| || |||||**| || *|
Query: 736 GCTGATGTATAT--------ACTT--ACA--T--ATT---TT---ACAGTGTA-TTCAAA 774
Target: 681749 TGAACTTTAAATTACAGATCAGATAT--TTTTAGTAA--AA-TTTTATCCAAACTAAGAT 681803
|*||***||*||||||*|**|*|||| |||| |||| || ||||*|| |*|||
Query: 775 TAAAGAGTATATTACATAAGACATATCCTTTT-GTAACCAACTTTTGTC---ATTAA--- 827
Target: 681804 GCAATATGAGTATAATCACTGATTCAA-AAAGCTTCCTTTAGTGAGCATGAAATATC-TC 681861
|||| |*|*|**|*| || |||| ||| || || *|*| || |||| |
Query: 828 -CAAT-TTACTGGACT---TG--TCAACAAA----CC--TA--AATC-TG---TATCGT- 867
Target: 681862 ACTATTTTAAT---T---TTAATATTGATTGTGTGTTAAAATAATAATAATTGCATTAT- 681914
||| |||| | ||*||*||| ||*|| |||**||||*|***|*||*|
Query: 868 -CTA---TAATGGCTACGTTCATTTTG---GTATG----AATCTTAATTACCCCTTTCTG 916
Target: 681915 -ATTATTGATAATGTGTATTCTTGTCATGTTTCCATTCTTACTGGAAATG--CCTCCAGT 681971
|||||| ||||| ||| ||*||||*|*| ||*|||| ||||| |*||*|*|
Query: 917 CATTATT--TAATG---ATT-TTCTCATATGT-CACTCTT-----AAATGTACTTCTAAT 964
Target: 681972 GTTTC----TCCATCAAATAGTAT-ACTGGCTCTAA 682002
*|||| |*|||||*||| || |*|||*||*||
Query: 965 TTTTCACTTTACATCACATA--ATGAATGGATCCAA 998
target_name: chr4
query_name: chr1
optimal_alignment_score: 280 suboptimal_alignment_score: 273 strand: + target_begin: 47000 target_end: 48059 query_begin: 2 query_end: 1001
Target: 47000 AAACATCTT-ATAGCTACTGGATTCTTTTTTGCCTATGTATTTA----TA-TATGT--G- 47050
|||||**|| ||*||*|| || | *|*| || ||||||| || || || |
Query: 2 AAACAGGTTAATCGCCAC--GA--C---ATAG--TA-GTATTTAGAGTTACTA-GTAAGC 50
Target: 47051 CTGTAT----CTATGTAATGTCTA--TTTTTATAAAGCTCTAATTGACCTAGAGGAAAAT 47104
||| || |||***||| |||| |||| |||| || ||| ||
Query: 51 CTG-ATGCCACTACACAAT-TCTAGCTTTT-------CTCT--TT-------AGG---AT 89
Target: 47105 GA--GTTT--TTGAATCAAATAT-TTTTTGAAGGGAAAGTAAAAACTGTGGTACATTGAA 47159
|| |||| ||*|*||**||*| ||||*|||***|*||*||||| ||| |
Query: 90 GATTGTTTCATTCAGTCTTATCTCTTTTAGAAAACATAGGAAAAA---------ATT-A- 138
Target: 47160 GTTCACATGACTAATCATTGAGAAATAAAAACAGACTTAGCAATTATTGGTAAAAAGCAG 47219
|| |||| ||||||| || |*|||||*||||*|*||
Query: 139 -TT--------TAAT--------AATAAAA------TT-----TAATTGGCAAAATGAAG 170
Target: 47220 --ATG--TTAAAA-----TATAC--ATTTTTGTTCAGGGTTAAAGGA-T---TGTTCTGA 47264
||| |||*|| |*|*| |||*|| |||||*|| |||| | ||||||*|
Query: 171 GTATGGCTTATAAGAGTGTTTTCCTATTGTT-TTCAGTGT---AGGACTCACTGTTCTAA 226
Target: 47265 ATTA----GATA---A--GATAAAGCTAAAAGTTTAAACAAGTTATAA---AAAGTTTCT 47312
||*| ||*| | |||***| ||||| |***|*|*||||||*| |*|*|**||
Query: 227 ATAACTGGGACACCCAAGGATTCTG-TAAAA-TGCCATCCAGTTATCATTTATATTCCCT 284
Target: 47313 A--T-AAAATTCATCTTGCCA-AAGAA---ATTTTGTCCATGAACATTAAATTACGAAAG 47365
| | ||||||||| | || |*|*| |||||*|*| |*||| |||||| |*|*|
Query: 285 AACTCAAAATTCAT-T---CACATGTATTCATTTTTTTC-TAAAC---AAATTA-GCATG 335
Target: 47366 GTATTATATGTTTTTTTGGT--AAATTAAGCATTTAAATAATAGCACAACAAGGTA---- 47419
||*| *||*|||| |||||**|| ||||*|||*|**||||
Query: 336 ----TAGA----ATTCTGGTTAAAATTTGGC---------ATAGAACACCCGGGTATTTT 378
Target: 47420 CTCTTAAGGCAC----TAATCTGCTCTTTAGCAAAATTTGTAAA--GTG--TTATAAACG 47471
*||*|||*|||| ||| ||| ||*|| ||**|*|||**|| ||| |||**||*|
Query: 379 TTCATAATGCACCCAATAA-CTG-TCATT--CACTAATTGAGAATGGTGATTTAACAAAG 434
Target: 47472 GGTTTTACTTTTGTAAATTTTTTGAAACAATTGTGGCAAAA------TAAATAACATGGT 47525
| | |**|||| *||*||||||*|*||***||||| |***|||| ||||
Query: 435 G-----A---TAATAAA-GTTATGAAACCAATGCCACAAAACATCTGTCTCTAAC-TGGT 484
Target: 47526 AATCTG-GAAT-TCTATTTCATAACATCAAGTGT-TTTAA-------ACCTCTAACATTT 47575
*|*|| |**| |*|*|*| *| *| |||| |*||| |*****||*||||
Query: 485 -GTGTGTGTGTGTGTGTGT-GT---GT---GTGTGTGTAAGAGGGAGAGAGAGAAAATTT 536
Target: 47576 C-TTC---CCA-AAATCAAAC----TTCAGTTTCAAAATTGT--CTTTCCT---CGTGC- 47620
| *|| ||| |||||**|| ||| *|||| ||*| ||||||| |*|||
Query: 537 CACTCCCTCCATAAATCTCACAGTATTC-TTTTC----TTTTTCCTTTCCTTTCCTTGCT 591
Target: 47621 CTGACTTT-TGAATGCTACAGAGGGC---CCCTGGAGTATCC-------AAAAGAGAGGT 47669
|| *|||| | || |**|**|| ||*|**| |*||| ||||||*|**|
Query: 592 CT-TCTTTCT-----CT-CCTATTGCTTTCCTTTCA-TTTCCTTCTCATAAAAGAAAAAT 643
Target: 47670 AAACTGGATTATTTGACATATTTAGTTACATGGGATTGCCAATCTTCTTTAGGTTATAT- 47728
||| |*|||***|*|||***|**||*| |||*|*|||*||| |||| ||||
Query: 644 -AAC---AATATAGAAAATAACAAAATATA---GATGGTCAACCTT-TTTA----ATATT 691
Target: 47729 -AGGTTA--TATTTTG--AT-----AAA-T-ATTCTATAGGTTATATTTTGATAAATGAT 47776
|||||| ||***|| || ||| | *||||*||| |*||**||||**|| ||
Query: 692 AAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTCTAG---AGATGCTGATGTAT-AT 747
Target: 47777 ACTAATATATGTTCCAAAATTGTATGAGATTTCTAATGTCTGAGTATATGCTATCAAAAT 47836
|||*|*||||*|| |*|*|||| |||*||| ***|||||||| || ||
Query: 748 ACTTACATATTTT---ACAGTGTA------TTCAAAT-AAAGAGTATAT--TA-CA---- 790
Target: 47837 TAAG--GTTT--TTATGT---TAAGTTATTGT-A--AAC----CACAGAGA-TT---ATC 47878
|||| *|*| ||*||| *||*|| |||| | ||| *||*| || || |*|
Query: 791 TAAGACATATCCTTTTGTAACCAACTT-TTGTCATTAACAATTTACTG-GACTTGTCAAC 848
Target: 47879 AAACTTCTTTGTCAACTGTGTTTCTGACTATAA---CTACCCTGGACATTTTGTTATTCA 47935
|||| || ||*|*|||*|| |*|||||| |||| |**|||||||*|||
Query: 849 AAAC--CT-----AAATCTGTATC-GTCTATAATGGCTAC---GTTCATTTTGGTAT--- 894
Target: 47936 AAGACAATTGTCTTGTTTAGATCCTTTTCAAGAGATAGTTTATAAGA--AGCTACAGAAC 47993
|| | ||||**|| |*||*|||| *| *||**|||| |*|| **|| ||*|
Query: 895 --GA-A----TCTTAATT--ACCCCTTTC-TG-CATTATTTA-ATGATTTTCT-CATA-- 939
Target: 47994 TGTGACAGGTGCTCTCAAATGCAGTTTTCCAA---ATAACTTTGGAGATCATGACAT--T 48048
||| || ||||*|||||*| *|||*|| *|*||||| | |||*|||| |
Query: 940 TGT--CA----CTCTTAAATGTA--CTTCTAATTTTTCACTTT--A---CATCACATAAT 986
Target: 48049 GAA---AT--AAAGTA 48059
||| || ||| ||
Query: 987 GAATGGATCCAAA-TA 1001
target_name: chr5
query_name: chr1
optimal_alignment_score: 230 suboptimal_alignment_score: 199 strand: + target_begin: 8806 target_end: 9723 query_begin: 11 query_end: 974
Target: 8806 AATGGCCAGGGCACTGAGGAG-CTGTGGAAGAACTGGGGAAATCACCGAAACCCAGTAC- 8863
|||*||||*|*|| | ||*|| *|*|*||***||| *|*||*| |*| |**|||*|||
Query: 11 AATCGCCACGACA-T-AGTAGTATTTAGAGTTACT--AGTAAGC-CTG-ATGCCACTACA 64
Target: 8864 CATTTCAGTGAGGCCATTCTC--CA--AAAACTCTCTC---CA-TCTTATTTCTT---G- 8911
||*||| | | ||**||||| *| |**|*|*|*|| || ||||||*|||| |
Query: 65 CAATTC--T-A-GCTTTTCTCTTTAGGATGATTGTTTCATTCAGTCTTATCTCTTTTAGA 120
Target: 8912 ------GGGAAAGAGTTCTTCTACT--TACAATATGAT---CAACCTGA--TTAAG---A 8955
*|||||*|*||*|| ||*| ||*|||*|*|| |||**||| *||*| *
Query: 121 AAACATAGGAAAAAATTATT-TAATAATAAAATTTAATTGGCAAAATGAAGGTATGGCTT 179
Target: 8956 AT-ATATTGGTTT-CTATAACTGTGATGCAGATTATAACTATACAAATGCCAATTACCAG 9013
|| |*|*||*||| |||| ||| *|*|||**||**||| | |*|| || |*|*
Query: 180 ATAAGAGTGTTTTCCTAT---TGT-TTTCAGTGTAGGACT---C-ACTG----TT-CTAA 226
Target: 9014 A-AGCTAAGCCACCC--TGATTC--CAAAAT---AT--AGTCTCACATTTCATGGTTTCC 9063
| |*||**|*||||| *||||| *||||| || ||| |**||||| || *||||
Query: 227 ATAACTGGGACACCCAAGGATTCTGTAAAATGCCATCCAGT-TATCATTT-AT--ATTCC 282
Target: 9064 TGGTA--TCAGAAATCCCTATGAGCCTG-A--GATTTTTTCCCTTAA-------AGCA-- 9109
*|| ||| ||||*|*| |*| |*|| | *|||||||*| ||| ||||
Query: 283 --CTAACTCA-AAATTCAT-TCA-CATGTATTCATTTTTTTC--TAAACAAATTAGCATG 335
Target: 9110 ---AATACTG---AAGAT-----A-AGAA-ACC----AATTAATTTCATTGTTGC----- 9147
|||*||| ||*|| | |||| ||| *||| *||||| |**|||
Query: 336 TAGAATTCTGGTTAAAATTTGGCATAGAACACCCGGGTATT-TTTTCA-TAATGCACCCA 393
Target: 9148 -TATCTTGT-AT---CCAATGGCATAA----AATCTATACTAACTTGATTAGAAA-TTCT 9197
||*| ||| || |*|||*| |*|| *||*|| ||*|| *|||*|*||| ||*|
Query: 394 ATAAC-TGTCATTCACTAATTG-AGAATGGTGATTTA-ACAAA--GGATAATAAAGTTAT 448
Target: 9198 G---CCAATG------AACAACT-T---TA--T--TGT-TTTGAGTGATG---------- 9229
| |||||| ||||*|| | || | ||| |*||*||| ||
Query: 449 GAAACCAATGCCACAAAACATCTGTCTCTAACTGGTGTGTGTGTGTG-TGTGTGTGTGTG 507
Target: 9230 -------AAGCCCCATTTGAGA-ATATAGGCTCAATGGCCTTGC-----TCT-----TA- 9270
|||****| |||| |*|*|***|||*| ||*|*| ||| ||
Query: 508 TGTGTGTAAGAGGGA---GAGAGAGAAAATTTCACT--CCCTCCATAAATCTCACAGTAT 562
Target: 9271 ACTGTTCTCTATGCAGTCACTTTCTTCTGCACTAAAGTGCCAATACAGATACTG-AATAC 9329
*||*||||*|*|*|**|| |||||*| |||*|| **|**|**|*| ||*|| **|*|
Query: 563 TCTTTTCTTTTTCCTTTC-CTTTCCT-TGCTCT--TCTTTCTCTCC---TATTGCTTTCC 615
Target: 9330 ATTGATTTAAAT-ACATAGATATATAAATA--GATAT-TTAAATATGC--AATATATATG 9383
*||*||||***| *|||| |*|*|*||||| *|||| **||||| *| ||||||*|||
Query: 616 TTTCATTTCCTTCTCATA-AAAGAAAAATAACAATATAGAAAATA-ACAAAATATAGATG 673
Target: 9384 G--ATAC---TTTATATATT--GATT---TAAA----CATTTTCC--------TCTCATA 9421
| | || |||| ||||| |*|| |||| ||||*||| |||| ||
Query: 674 GTCA-ACCTTTTTA-ATATTAAGGTTACCTAAAATGCCATTATCCAAAGTGGTTCTC-TA 730
Target: 9422 GA-----TGA--AAAATCACTCTAACATGTATTGATGGCTTCACA-AGAAATCATTTACA 9473
|| ||| *|*|| ||| | ||| |||| || ||| *|*|*|||**||*|
Query: 731 GAGATGCTGATGTATAT-ACT-T-ACA--TATT------TT-ACAGTGTATTCAAATAAA 778
Target: 9474 GAAAATAATTGCATATGATACAGT--GTTTGTGCCAAAATGTATTCATGGCTTTAAAAAC 9531
||**|| |||*||||*||*|*| | *|||||**|*||*| CPU time: 304.472078 seconds
|| ||*|*||||*||
Query: 779 GAGTAT-ATTACATAAGACATA-TCCTTTTGTAACCAACT---TT--TGTCATTAACAA- 830
Target: 9532 TTCAGTGGAAATGTCTATTCAGATCCCTAGCCCATTGTTAAATTGGTTTCTGTTTTCTTG 9591
||*|*||||**||||*| || |*|| |||||**||*|| | |||
Query: 831 TTTACTGGACTTGTCAA--CA-AACC------------TAAATCTGTATC-G---TCT-- 869
Target: 9592 CTAAGTTTGAGCTGC-TTATAGATGATGGATATTGACCCCTTATAGATGTTGGATATTGA 9650
*||| || |||*| || *||**||| || ||| ||*|| | ||| |
Query: 870 ATAA---TG-GCTACGTT---CATTTTGG-TA-TGA----------ATCTT--A-ATT-A 906
Target: 9651 CCCC-TTGTGGATGTATGGCCGGTGCTTTTCCCAGTATTTAGGTCATCTCTGCA---CAC 9706
|||| ||*||*|| ||| ****||*|||||*|| ||| |||| ||||**| *||
Query: 907 CCCCTTTCTGCAT-TAT--TTAATGATTTTCTCA-TAT----GTCA-CTCTTAAATGTAC 957
Target: 9707 TGTTGATTGTTTC-CTTT 9723
|**|*||| |||| ||||
Query: 958 TTCTAATT-TTTCACTTT 974
make[1]: Leaving directory '/build/libssw-1.1'
create-stamp debian/debhelper-build-stamp
dh_prep
debian/rules override_dh_auto_install
make[1]: Entering directory '/build/libssw-1.1'
sed 's/@DEB_HOST_MULTIARCH@/i386-linux-gnu/g' debian/libssw0.install.in > debian/libssw0.install
sed 's/@DEB_HOST_MULTIARCH@/i386-linux-gnu/g' debian/libssw-dev.install.in > debian/libssw-dev.install
sed -e 's/@DEB_HOST_MULTIARCH@/i386-linux-gnu/g' \
-e 's/@DEB_JAVA_PKG_VERSION@/1.1/g' debian/libssw-dev.links.in > debian/libssw-dev.links
sed 's/@DEB_HOST_MULTIARCH@/i386-linux-gnu/g' debian/libssw-java.install.in > debian/libssw-java.install
sed -e 's/@DEB_HOST_MULTIARCH@/i386-linux-gnu/g' \
-e 's/@DEB_JAVA_PKG_VERSION@/1.1/g' debian/libssw-java.links.in > debian/libssw-java.links
mv src/ssw.jar src/ssw-1.1.jar
dh_auto_install
make[1]: Leaving directory '/build/libssw-1.1'
dh_install
jh_installjavadoc
dh_installdocs
dh_installchangelogs
debian/rules override_dh_installman
make[1]: Entering directory '/build/libssw-1.1'
LD_LIBRARY_PATH=`pwd`/src help2man --version-string=' ' --help-option=' ' \
-I debian/extra-man-info.txt \
-N -n 'fast Smith-Waterman aligner' \
--no-discard-stderr src/ssw-align \
| fgrep -v ERROR > debian/ssw-align.1
dh_installman
make[1]: Leaving directory '/build/libssw-1.1'
dh_perl
dh_link
jh_installlibs
jh_classpath
jh_manifest
jh_exec
jh_depends
mh_installpoms
mh_linkjars --skip-clean-poms
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_dwz -a
dh_strip -a
dh_makeshlibs -a
dh_shlibdeps -a
dh_installdeb
dh_gencontrol
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libssw0' in '../libssw0_1.1-13_i386.deb'.
dpkg-deb: building package 'libssw-java-dbgsym' in '../libssw-java-dbgsym_1.1-13_i386.deb'.
dpkg-deb: building package 'libssw-dev' in '../libssw-dev_1.1-13_i386.deb'.
dpkg-deb: building package 'libssw0-dbgsym' in '../libssw0-dbgsym_1.1-13_i386.deb'.
dpkg-deb: building package 'ssw-align-dbgsym' in '../ssw-align-dbgsym_1.1-13_i386.deb'.
dpkg-deb: building package 'libssw-java' in '../libssw-java_1.1-13_i386.deb'.
dpkg-deb: building package 'ssw-align' in '../ssw-align_1.1-13_i386.deb'.
dpkg-genbuildinfo --build=binary
dpkg-genchanges --build=binary >../libssw_1.1-13_i386.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
I: copying local configuration
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/B01_cleanup starting
I: user script /srv/workspace/pbuilder/30664/tmp/hooks/B01_cleanup finished
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/30664 and its subdirectories
I: Current time: Mon May 31 00:00:15 +14 2021
I: pbuilder-time-stamp: 1622368815