I: pbuilder: network access will be disabled during build I: Current time: Tue Aug 17 23:50:15 -12 2021 I: pbuilder-time-stamp: 1629287415 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [python-sqt_0.8.0-4.dsc] I: copying [./python-sqt_0.8.0.orig.tar.gz] I: copying [./python-sqt_0.8.0-4.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.6ypa26Cn/trustedkeys.kbx': General error gpgv: Signature made Tue Feb 4 20:49:50 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-sqt_0.8.0-4.dsc dpkg-source: info: extracting python-sqt in python-sqt-0.8.0 dpkg-source: info: unpacking python-sqt_0.8.0.orig.tar.gz dpkg-source: info: unpacking python-sqt_0.8.0-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fixme_ignore_failing_test.patch dpkg-source: info: applying fixme_ignore_failing_test2.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/17965/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='f54a918b2f03482d91f0a06cf1f47d9c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='17965' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.itERDL9QLW/pbuilderrc_WJrN --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.itERDL9QLW/b1 --logfile b1/build.log python-sqt_0.8.0-4.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 5.10.0-8-686-pae #1 SMP Debian 5.10.46-4 (2021-08-03) i686 GNU/Linux I: ls -l /bin total 5832 -rwxr-xr-x 1 root root 1367848 Aug 4 08:25 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Jul 28 07:09 more -rwsr-xr-x 1 root root 50720 Jul 28 07:09 mount -rwxr-xr-x 1 root root 13856 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 15 21:25 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Jul 28 07:09 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 21:55 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30236 Jul 28 07:09 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/17965/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-python, python3-all-dev, python3-setuptools, cython3, python3-nose, python3-cutadapt, python3-pysam, python3-seaborn, python3-xopen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. pbuilder-satisfydepends-dummy depends on python3-cutadapt; however: Package python3-cutadapt is not installed. pbuilder-satisfydepends-dummy depends on python3-pysam; however: Package python3-pysam is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on python3-xopen; however: Package python3-xopen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcurl3-gnutls{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libhts3{a} libicu67{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmpdec3{a} libnghttp2-14{a} libpipeline1{a} libpng16-16{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.9{a} libpython3.9-dev{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libtcl8.6{a} libtiff5{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp6{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxss1{a} m4{a} mailcap{a} man-db{a} media-types{a} mime-support{a} pigz{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-cutadapt{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-dnaio{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-nose{a} python3-numpy{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pkg-resources{a} python3-pyparsing{a} python3-pysam{a} python3-scipy{a} python3-seaborn{a} python3-setuptools{a} python3-six{a} python3-tk{a} python3-tz{a} python3-xopen{a} python3.9{a} python3.9-dev{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} ttf-bitstream-vera{a} ucf{a} x11-common{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-lxml python3-numexpr python3-odf python3-olefile python3-openpyxl python3-patsy python3-tables python3-xlwt wget 0 packages upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 77.8 MB of archives. After unpacking 301 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-8 [149 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 pigz i386 2.6-1 [64.6 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 mailcap all 3.69 [31.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 mime-support all 3.66 [10.9 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 ucf all 3.0043 [74.0 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libtcl8.6 i386 8.6.11+dfsg-1 [1082 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1 [429 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 ttf-bitstream-vera all 1.10-8.1 [223 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libfontconfig1 i386 2.13.1-4.2 [358 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libmd0 i386 1.0.3-3 [28.9 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libbsd0 i386 0.11.3-1 [111 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libxcb1 i386 1.14-3 [144 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libx11-data all 2:1.7.2-1 [311 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 libx11-6 i386 2:1.7.2-1 [794 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 libxft2 i386 2.3.2-2 [58.2 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 libxext6 i386 2:1.3.3-1.1 [55.2 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 x11-common all 1:7.7+22 [252 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 libtk8.6 i386 8.6.11-2 [825 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-4.1 [622 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 blt i386 2.5.3+dfsg-4.1 [14.9 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 cython3 i386 0.29.21-3+b1 [1303 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 69 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 72 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 fonts-lyx all 2.3.6-1 [205 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 libblas3 i386 3.9.0-3 [147 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libcurl3-gnutls i386 7.74.0-1.3+b1 [368 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 85 http://deb.debian.org/debian bullseye/main i386 libexpat1-dev i386 2.2.10-2 [147 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 libgfortran5 i386 10.2.1-6 [643 kB] Get: 87 http://deb.debian.org/debian bullseye/main i386 libhts3 i386 1.11-4 [408 kB] Get: 88 http://deb.debian.org/debian bullseye/main i386 libimagequant0 i386 2.12.2-1.1 [32.4 kB] Get: 89 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 90 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 91 http://deb.debian.org/debian bullseye/main i386 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 92 http://deb.debian.org/debian bullseye/main i386 libjs-jquery-ui all 1.12.1+dfsg-8 [232 kB] Get: 93 http://deb.debian.org/debian bullseye/main i386 libjs-underscore all 1.9.1~dfsg-3 [100 kB] Get: 94 http://deb.debian.org/debian bullseye/main i386 libjs-sphinxdoc all 3.4.3-2 [127 kB] Get: 95 http://deb.debian.org/debian bullseye/main i386 liblapack3 i386 3.9.0-3 [1960 kB] Get: 96 http://deb.debian.org/debian bullseye/main i386 liblbfgsb0 i386 3.0+dfsg.3-9 [28.4 kB] Get: 97 http://deb.debian.org/debian bullseye/main i386 liblcms2-2 i386 2.12~rc1-2 [161 kB] Get: 98 http://deb.debian.org/debian bullseye/main i386 libpython3.9 i386 3.9.2-1 [1715 kB] Get: 99 http://deb.debian.org/debian bullseye/main i386 libpython3.9-dev i386 3.9.2-1 [3822 kB] Get: 100 http://deb.debian.org/debian bullseye/main i386 libpython3-dev i386 3.9.2-3 [21.7 kB] Get: 101 http://deb.debian.org/debian bullseye/main i386 libpython3-all-dev i386 3.9.2-3 [1068 B] Get: 102 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2.1 [269 kB] Get: 103 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1 [305 kB] Get: 104 http://deb.debian.org/debian bullseye/main i386 libwebpdemux2 i386 0.6.1-2.1 [88.2 kB] Get: 105 http://deb.debian.org/debian bullseye/main i386 libwebpmux3 i386 0.6.1-2.1 [99.0 kB] Get: 106 http://deb.debian.org/debian bullseye/main i386 python-matplotlib-data all 3.3.4-1 [4153 kB] Get: 107 http://deb.debian.org/debian bullseye/main i386 python3-all i386 3.9.2-3 [1060 B] Get: 108 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get: 109 http://deb.debian.org/debian bullseye/main i386 python3.9-dev i386 3.9.2-1 [515 kB] Get: 110 http://deb.debian.org/debian bullseye/main i386 python3-dev i386 3.9.2-3 [24.8 kB] Get: 111 http://deb.debian.org/debian bullseye/main i386 python3-all-dev i386 3.9.2-3 [1068 B] Get: 112 http://deb.debian.org/debian bullseye/main i386 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 113 http://deb.debian.org/debian bullseye/main i386 python3-xopen all 1.1.0-1 [12.0 kB] Get: 114 http://deb.debian.org/debian bullseye/main i386 python3-dnaio i386 0.5.0-1 [96.4 kB] Get: 115 http://deb.debian.org/debian bullseye/main i386 python3-cutadapt i386 3.2-2 [128 kB] Get: 116 http://deb.debian.org/debian bullseye/main i386 python3-six all 1.16.0-2 [17.5 kB] Get: 117 http://deb.debian.org/debian bullseye/main i386 python3-cycler all 0.10.0-3 [8084 B] Get: 118 http://deb.debian.org/debian bullseye/main i386 python3-dateutil all 2.8.1-6 [79.2 kB] Get: 119 http://deb.debian.org/debian bullseye/main i386 python3-decorator all 4.4.2-2 [15.8 kB] Get: 120 http://deb.debian.org/debian bullseye/main i386 python3-kiwisolver i386 1.3.1-1+b1 [58.5 kB] Get: 121 http://deb.debian.org/debian bullseye/main i386 python3-pyparsing all 2.4.7-1 [109 kB] Get: 122 http://deb.debian.org/debian bullseye/main i386 python3-numpy i386 1:1.19.5-1 [3600 kB] Get: 123 http://deb.debian.org/debian bullseye/main i386 python3-pil i386 8.1.2+dfsg-0.3 [445 kB] Get: 124 http://deb.debian.org/debian bullseye/main i386 python3-matplotlib i386 3.3.4-1 [4165 kB] Get: 125 http://deb.debian.org/debian bullseye/main i386 python3-nose all 1.3.7-7 [133 kB] Get: 126 http://deb.debian.org/debian bullseye/main i386 python3-tz all 2021.1-1 [34.8 kB] Get: 127 http://deb.debian.org/debian bullseye/main i386 python3-pandas-lib i386 1.1.5+dfsg-2 [3182 kB] Get: 128 http://deb.debian.org/debian bullseye/main i386 python3-pandas all 1.1.5+dfsg-2 [2096 kB] Get: 129 http://deb.debian.org/debian bullseye/main i386 python3-pysam i386 0.15.4+ds-3+b2 [1571 kB] Get: 130 http://deb.debian.org/debian bullseye/main i386 python3-scipy i386 1.6.0-2 [11.9 MB] Get: 131 http://deb.debian.org/debian bullseye/main i386 python3-tk i386 3.9.2-1 [101 kB] Get: 132 http://deb.debian.org/debian bullseye/main i386 python3-seaborn all 0.11.1-1 [206 kB] Get: 133 http://deb.debian.org/debian bullseye/main i386 python3-setuptools all 52.0.0-4 [366 kB] Fetched 77.8 MB in 1min 33s (834 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8_i386.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../3-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package pigz. Preparing to unpack .../5-pigz_2.6-1_i386.deb ... Unpacking pigz (2.6-1) ... Selecting previously unselected package libpython3.9-minimal:i386. Preparing to unpack .../6-libpython3.9-minimal_3.9.2-1_i386.deb ... Unpacking libpython3.9-minimal:i386 (3.9.2-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../7-libexpat1_2.2.10-2_i386.deb ... Unpacking libexpat1:i386 (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../8-python3.9-minimal_3.9.2-1_i386.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:i386 (3.9.2-1) ... Setting up libexpat1:i386 (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20551 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_i386.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package mailcap. Preparing to unpack .../2-mailcap_3.69_all.deb ... Unpacking mailcap (3.69) ... Selecting previously unselected package mime-support. Preparing to unpack .../3-mime-support_3.66_all.deb ... Unpacking mime-support (3.66) ... Selecting previously unselected package libmpdec3:i386. Preparing to unpack .../4-libmpdec3_2.5.1-1_i386.deb ... Unpacking libmpdec3:i386 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:i386. Preparing to unpack .../6-libreadline8_8.1-1_i386.deb ... Unpacking libreadline8:i386 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:i386. Preparing to unpack .../7-libpython3.9-stdlib_3.9.2-1_i386.deb ... Unpacking libpython3.9-stdlib:i386 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../8-python3.9_3.9.2-1_i386.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../9-libpython3-stdlib_3.9.2-3_i386.deb ... Unpacking libpython3-stdlib:i386 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20996 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_i386.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_i386.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../003-libmagic1_1%3a5.39-3_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_i386.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../007-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../008-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../009-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../010-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../011-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../012-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libtcl8.6:i386. Preparing to unpack .../013-libtcl8.6_8.6.11+dfsg-1_i386.deb ... Unpacking libtcl8.6:i386 (8.6.11+dfsg-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../014-libbrotli1_1.0.9-2+b2_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:i386. Preparing to unpack .../015-libpng16-16_1.6.37-3_i386.deb ... Unpacking libpng16-16:i386 (1.6.37-3) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../016-libfreetype6_2.10.4+dfsg-1_i386.deb ... Unpacking libfreetype6:i386 (2.10.4+dfsg-1) ... Selecting previously unselected package ttf-bitstream-vera. Preparing to unpack .../017-ttf-bitstream-vera_1.10-8.1_all.deb ... Unpacking ttf-bitstream-vera (1.10-8.1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../018-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../019-libfontconfig1_2.13.1-4.2_i386.deb ... Unpacking libfontconfig1:i386 (2.13.1-4.2) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../020-libxau6_1%3a1.0.9-1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1) ... Selecting previously unselected package libmd0:i386. Preparing to unpack .../021-libmd0_1.0.3-3_i386.deb ... Unpacking libmd0:i386 (1.0.3-3) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../022-libbsd0_0.11.3-1_i386.deb ... Unpacking libbsd0:i386 (0.11.3-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../023-libxdmcp6_1%3a1.1.2-3_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../024-libxcb1_1.14-3_i386.deb ... Unpacking libxcb1:i386 (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../025-libx11-data_2%3a1.7.2-1_all.deb ... Unpacking libx11-data (2:1.7.2-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../026-libx11-6_2%3a1.7.2-1_i386.deb ... Unpacking libx11-6:i386 (2:1.7.2-1) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../027-libxrender1_1%3a0.9.10-1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.10-1) ... Selecting previously unselected package libxft2:i386. Preparing to unpack .../028-libxft2_2.3.2-2_i386.deb ... Unpacking libxft2:i386 (2.3.2-2) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../029-libxext6_2%3a1.3.3-1.1_i386.deb ... Unpacking libxext6:i386 (2:1.3.3-1.1) ... Selecting previously unselected package x11-common. Preparing to unpack .../030-x11-common_1%3a7.7+22_all.deb ... Unpacking x11-common (1:7.7+22) ... Selecting previously unselected package libxss1:i386. Preparing to unpack .../031-libxss1_1%3a1.2.3-1_i386.deb ... Unpacking libxss1:i386 (1:1.2.3-1) ... Selecting previously unselected package libtk8.6:i386. Preparing to unpack .../032-libtk8.6_8.6.11-2_i386.deb ... Unpacking libtk8.6:i386 (8.6.11-2) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../033-tk8.6-blt2.5_2.5.3+dfsg-4.1_i386.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-4.1) ... Selecting previously unselected package blt. Preparing to unpack .../034-blt_2.5.3+dfsg-4.1_i386.deb ... Unpacking blt (2.5.3+dfsg-4.1) ... Selecting previously unselected package cython3. Preparing to unpack .../035-cython3_0.29.21-3+b1_i386.deb ... Unpacking cython3 (0.29.21-3+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../036-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../037-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../038-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../039-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../040-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... 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Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libnghttp2-14:i386 (1.43.0-1) ... Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... Setting up libsasl2-modules-db:i386 (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libblas3:i386 (3.9.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libexpat1-dev:i386 (2.2.10-2) ... Setting up libjpeg62-turbo:i386 (1:2.0.6-4) ... Setting up libx11-data (2:1.7.2-1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libsigsegv2:i386 (2.13-1) ... Setting up libimagequant0:i386 (2.12.2-1.1) ... Setting up libpng16-16:i386 (1.6.37-3) ... Setting up libtcl8.6:i386 (8.6.11+dfsg-1) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:i386 (0.6.1-2.1) ... Setting up libsasl2-2:i386 (2.1.27+dfsg-2.1) ... Setting up libgfortran5:i386 (10.2.1-6) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-2) ... Setting up libmd0:i386 (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up pigz (2.6-1) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libmpdec3:i386 (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:i386 (1.9.0-2) ... Setting up libtiff5:i386 (4.2.0-1) ... Setting up libjs-jquery (3.5.1+dfsg+~3.5.5-7) ... Setting up python-matplotlib-data (3.3.4-1) ... Setting up libwebpmux3:i386 (0.6.1-2.1) ... Setting up libbsd0:i386 (0.11.3-1) ... Setting up mailcap (3.69) ... Setting up libelf1:i386 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7) ... Setting up libjs-underscore (1.9.1~dfsg-3) ... 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Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libx11-6:i386 (2:1.7.2-1) ... Setting up libpython3.9-stdlib:i386 (3.9.2-1) ... Setting up libpython3-stdlib:i386 (3.9.2-3) ... Setting up liblbfgsb0:i386 (3.0+dfsg.3-9) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhts3:i386 (1.11-4) ... Setting up libxrender1:i386 (1:0.9.10-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libxext6:i386 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libpython3.9:i386 (3.9.2-1) ... Setting up libxss1:i386 (1:1.2.3-1) ... Setting up libfontconfig1:i386 (2.13.1-4.2) ... Setting up python3.9 (3.9.2-1) ... Setting up libxft2:i386 (2.3.2-2) ... Setting up libtk8.6:i386 (8.6.11-2) ... 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Setting up python3-tk:i386 (3.9.2-1) ... Setting up python3-nose (1.3.7-7) ... Setting up python3-xopen (1.1.0-1) ... Setting up libpython3-all-dev:i386 (3.9.2-3) ... Setting up python3-dev (3.9.2-3) ... Setting up python3-numpy (1:1.19.5-1) ... Setting up python3-dnaio (0.5.0-1) ... Setting up python3-all-dev (3.9.2-3) ... Setting up python3-matplotlib (3.3.4-1) ... Setting up python3-scipy (1.6.0-2) ... Setting up python3-pandas-lib:i386 (1.1.5+dfsg-2) ... Setting up python3-pandas (1.1.5+dfsg-2) ... Setting up python3-cutadapt (3.2-2) ... Setting up python3-seaborn (0.11.1-1) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/python-sqt-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-sqt_0.8.0-4_source.changes dpkg-buildpackage: info: source package python-sqt dpkg-buildpackage: info: source version 0.8.0-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ fakeroot debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-sqt.substvars debian/files rm -fr -- debian/python3-sqt/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 3.9 I: pybuild base:232: python3.9 setup.py config running config dh_auto_build -O--buildsystem=pybuild pybuild --build --test-nose -i python{version} -p 3.9 I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/region.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/reads.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/align.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/compat.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/_codons.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/cigar.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/dna.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/args.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/math.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/_version.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/__main__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/ansicolor.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/utils.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/intervaltree.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/colorspace.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt copying sqt/qualtrim.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io copying sqt/io/sff.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io copying sqt/io/fasta.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io copying sqt/io/bam.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io copying sqt/io/gtf.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io copying sqt/io/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io creating /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/bameof.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/qgramfreq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/samsetop.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/fastagrep.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/readcov.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/align.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/histogram.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/fastaextract.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/fastxmod.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/checkvcfref.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/qualityguess.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/bam2fastq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/randomseq.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/samfixn.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/checkfastqpe.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/fastastats.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/mutate.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/coverage.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/readlenhisto.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/fixbam64.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/addadapt.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/translate.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/compare_sequences.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/bamstats.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/simreads.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/chars.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/__init__.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands copying sqt/commands/cutvect.py -> /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands UPDATING /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_version.py set /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_version.py to '0.8.0' running build_ext /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:369: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-sqt-0.8.0/sqt/_helpers.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling sqt/_helpers.pyx because it changed. [1/1] Cythonizing sqt/_helpers.pyx building 'sqt._helpers' extension creating build creating build/temp.linux-i386-3.9 creating build/temp.linux-i386-3.9/sqt i686-linux-gnu-gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -ffile-prefix-map=/build/python3.9-hfHQKB/python3.9-3.9.2=. -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -fdebug-prefix-map=/build/python-sqt-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.9 -c sqt/_helpers.c -o build/temp.linux-i386-3.9/sqt/_helpers.o sqt/_helpers.c: In function ‘__pyx_pf_3sqt_8_helpers_12nt_to_aa’: sqt/_helpers.c:6544:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6544 | __pyx_v_nt0 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[__pyx_v_i])]); | ~~~~~~~~~~^~~~~~~~~~~~ sqt/_helpers.c:6553:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6553 | __pyx_v_nt1 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 1)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ sqt/_helpers.c:6562:51: warning: array subscript has type ‘char’ [-Wchar-subscripts] 6562 | __pyx_v_nt2 = (__pyx_v_nt_trans_ptr[(__pyx_v_b[(__pyx_v_i + 2)])]); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~ i686-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/python-sqt-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.9/sqt/_helpers.o -o /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_helpers.cpython-39-i386-linux-gnu.so debian/rules override_dh_auto_test make[1]: Entering directory '/build/python-sqt-0.8.0' LC_ALL=C.UTF-8 dh_auto_test pybuild --test --test-nose -i python{version} -p 3.9 I: pybuild base:232: cd /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build; python3.9 -m nose -v tests tests.testalign.test_edit_distance ... ok tests.testalign.test_edit_distance_bytes ... ok tests.testalign.test_edit_distance_banded ... ok tests.testalign.test_global_alignment ... ok tests.testalign.test_consensus ... ok tests.testalign.test_hamming_distance ... ok tests.testalign.test_hamming_distance_incorrect_length ... ok tests.testcigar.test_parse ... ok tests.testcigar.test_cigar_class ... ok tests.testcigar.test_parse_error_1 ... ok tests.testcigar.test_parse_error_2 ... ok tests.testcigar.test_parse_error_3 ... ok tests.testcigar.test_elements ... ok tests.testcigar.test_length ... ok tests.testcigar.test_concat ... ok tests.testcigar.test_split_at_element ... ok tests.testcigar.test_reference_to_query_position ... ok tests.testcigar.test_clipping ... ok tests.testcolorspace.test_encode ... ok tests.testcolorspace.test_decode ... ok tests.testdna.test_complement_string ... ok tests.testdna.test_complement_bytes ... ok tests.testdna.test_n_intervals ... ok tests.testdna.test_intervals_complement ... ok tests.testdna.test_amino_acid_regex ... ok tests.testdna.test_nt_to_aa ... ok tests.testfasta.test_fastqwriter ... ok tests.testfasta.test_fastqwriter_twoheaders ... ok tests.testfasta.test_fastawriter ... ok tests.testfasta.test_fastawriter_linelength ... ok tests.testfasta.test_fastawriter_sequence ... ok tests.testfasta.test_fastawriter_contextmanager ... ok tests.testfasta.test_fastareader ... ok tests.testfasta.test_fastareader_upper ... ok tests.testfasta.test_fastareader_lower ... ok tests.testfasta.test_fastareader_binary ... ok tests.testfasta.test_sequence_reader ... ok tests.testfasta.test_fastareader_contextmanager ... ok tests.testfasta.test_fastq_header ... ok tests.testindexedfasta.test_indexedfasta_contextmanager ... ok tests.testindexedfasta.test_indexedfasta ... ok tests.testindexedfasta.test_all_regions ... ok tests.testintervaltree.test_intervaltree ... ok tests.testmedian.test_median ... ok tests.testregion.test_region ... ok ---------------------------------------------------------------------- Ran 45 tests in 14.034s OK make[1]: Leaving directory '/build/python-sqt-0.8.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-sqt.substvars rm -fr -- debian/.debhelper/generated/python3-sqt/ debian/python3-sqt/ debian/tmp/ dh_auto_install -O--buildsystem=pybuild install -d /build/python-sqt-0.8.0/debian/python3-sqt pybuild --install --test-nose -i python{version} -p 3.9 --dest-dir /build/python-sqt-0.8.0/debian/python3-sqt I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/python-sqt-0.8.0/debian/python3-sqt running install running build running build_py UPDATING /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_version.py set /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_version.py to '0.8.0' running build_ext running install_lib creating /build/python-sqt-0.8.0/debian/python3-sqt/usr creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9 creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/region.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/reads.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/align.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/compat.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_codons.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/cigar.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/colorspace.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/args.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/__init__.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/cigar.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/dna.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/math.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/_codons.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/compat.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/region.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/utils.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/align.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/_version.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__pycache__/intervaltree.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/dna.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/args.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/math.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_version.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__main__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/ansicolor.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/utils.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/intervaltree.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/colorspace.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/_helpers.cpython-39-i386-linux-gnu.so -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/sff.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/fasta.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/__pycache__/fasta.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/__pycache__/__init__.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/__pycache__/gtf.cpython-39.pyc -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/__pycache__ copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/bam.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/gtf.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/io/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io creating /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/bameof.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/qgramfreq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/samsetop.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/fastagrep.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/readcov.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/align.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/histogram.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/fastaextract.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/fastxmod.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/checkvcfref.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/qualityguess.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/bam2fastq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/randomseq.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/samfixn.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/checkfastqpe.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/fastastats.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/mutate.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/coverage.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/readlenhisto.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/fixbam64.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/addadapt.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/translate.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/compare_sequences.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/bamstats.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/simreads.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/chars.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/__init__.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/commands/cutvect.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands copying /build/python-sqt-0.8.0/.pybuild/cpython3_3.9_sqt/build/sqt/qualtrim.py -> /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/region.py to region.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/reads.py to reads.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/align.py to align.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/compat.py to compat.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/_codons.py to _codons.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/cigar.py to cigar.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/dna.py to dna.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/args.py to args.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/math.py to math.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/_version.py to _version.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__main__.py to __main__.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/ansicolor.py to ansicolor.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/utils.py to utils.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/intervaltree.py to intervaltree.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/colorspace.py to colorspace.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/sff.py to sff.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/fasta.py to fasta.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/bam.py to bam.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/gtf.py to gtf.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/io/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/bameof.py to bameof.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/qgramfreq.py to qgramfreq.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/samsetop.py to samsetop.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/fastagrep.py to fastagrep.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/readcov.py to readcov.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/align.py to align.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/histogram.py to histogram.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/fastaextract.py to fastaextract.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/fastxmod.py to fastxmod.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/checkvcfref.py to checkvcfref.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/qualityguess.py to qualityguess.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/bam2fastq.py to bam2fastq.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/randomseq.py to randomseq.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/samfixn.py to samfixn.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/checkfastqpe.py to checkfastqpe.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/fastastats.py to fastastats.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/mutate.py to mutate.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/coverage.py to coverage.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/readlenhisto.py to readlenhisto.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/fixbam64.py to fixbam64.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/addadapt.py to addadapt.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/translate.py to translate.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/compare_sequences.py to compare_sequences.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/bamstats.py to bamstats.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/simreads.py to simreads.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/chars.py to chars.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/__init__.py to __init__.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/commands/cutvect.py to cutvect.cpython-39.pyc byte-compiling /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt/qualtrim.py to qualtrim.cpython-39.pyc running install_egg_info running egg_info creating sqt.egg-info writing sqt.egg-info/PKG-INFO writing dependency_links to sqt.egg-info/dependency_links.txt writing entry points to sqt.egg-info/entry_points.txt writing requirements to sqt.egg-info/requires.txt writing top-level names to sqt.egg-info/top_level.txt writing manifest file 'sqt.egg-info/SOURCES.txt' reading manifest file 'sqt.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'sqt.egg-info/SOURCES.txt' Copying sqt.egg-info to /build/python-sqt-0.8.0/debian/python3-sqt/usr/lib/python3.9/dist-packages/sqt-0.8.0.egg-info Skipping SOURCES.txt running install_scripts Installing sqt script to /build/python-sqt-0.8.0/debian/python3-sqt/usr/bin dh_installdocs -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/doc/python3-sqt install -d debian/.debhelper/generated/python3-sqt install -p -m0644 debian/README.Debian debian/python3-sqt/usr/share/doc/python3-sqt/README.Debian install -p -m0644 debian/copyright debian/python3-sqt/usr/share/doc/python3-sqt/copyright dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python3-sqt/usr/share/doc/python3-sqt/changelog.Debian dh_installman -O--buildsystem=pybuild install -d debian/python3-sqt/usr/share/man/man1/ install -p -m0644 ./debian/sqt.1 debian/python3-sqt/usr/share/man/man1/sqt.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-sqt/usr/share/man/man1/sqt.1 mv debian/python3-sqt/usr/share/man/man1/sqt.1.dh-new debian/python3-sqt/usr/share/man/man1/sqt.1 chmod 0644 -- debian/python3-sqt/usr/share/man/man1/sqt.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 4.20201102+nmu1 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:165: supported Python versions: 3.9 (default=3.9) D: dh_python3 debhelper:152: source=python-sqt, binary packages=['python3-sqt'] D: dh_python3 dh_python3:183: processing package python3-sqt... D: dh_python3 fs:49: moving files from debian/python3-sqt/usr/lib/python3.9/dist-packages to debian/python3-sqt/usr/lib/python3/dist-packages/ D: dh_python3 fs:260: package python3-sqt details = {'requires.txt': {'debian/python3-sqt/usr/lib/python3/dist-packages/sqt-0.8.0.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.9')}, 'ext_no_version': set()} D: dh_python3 depends:117: generating dependencies for package python3-sqt D: dh_python3 pydist:142: trying to find dependency for cutadapt (python=None) D: dh_python3 pydist:142: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:142: trying to find dependency for pysam!=0.9.0 (python=None) D: dh_python3 pydist:142: trying to find dependency for seaborn (python=None) D: dh_python3 pydist:142: trying to find dependency for xopen (python=None) D: dh_python3 depends:275: D={'python3-xopen', 'python3:any', 'python3 (>= 3.9~)', 'python3-seaborn', 'python3-pysam', 'python3-matplotlib', 'python3-cutadapt', 'python3 (<< 3.10)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild cd debian/python3-sqt chmod a-x usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 gzip -9nf usr/share/doc/python3-sqt/changelog.Debian usr/share/man/man1/sqt.1 cd '/build/python-sqt-0.8.0' dh_fixperms -O--buildsystem=pybuild find debian/python3-sqt -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-sqt ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-sqt/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-sqt/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-sqt/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-sqt/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-sqt/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -O--buildsystem=pybuild dwz -- debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-39-i386-linux-gnu.so dh_strip -O--buildsystem=pybuild install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/70 objcopy --only-keep-debug --compress-debug-sections debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-39-i386-linux-gnu.so debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/70/ecabd64bd247dff01e1ddccfc1e59cd7cff17c.debug chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/70/ecabd64bd247dff01e1ddccfc1e59cd7cff17c.debug chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/70/ecabd64bd247dff01e1ddccfc1e59cd7cff17c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-39-i386-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-sqt/dbgsym-root/usr/lib/debug/.build-id/70/ecabd64bd247dff01e1ddccfc1e59cd7cff17c.debug debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-39-i386-linux-gnu.so install -d debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc ln -s python3-sqt debian/.debhelper/python3-sqt/dbgsym-root/usr/share/doc/python3-sqt-dbgsym dh_makeshlibs -O--buildsystem=pybuild rm -f debian/python3-sqt/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=pybuild install -d debian/python3-sqt/DEBIAN dpkg-shlibdeps -Tdebian/python3-sqt.substvars debian/python3-sqt/usr/lib/python3/dist-packages/sqt/_helpers.cpython-39-i386-linux-gnu.so dh_installdeb -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/postinst cat debian/python3-sqt.postinst.debhelper >> debian/python3-sqt/DEBIAN/postinst chmod 0755 -- debian/python3-sqt/DEBIAN/postinst chown 0:0 -- debian/python3-sqt/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-sqt/DEBIAN/prerm cat debian/python3-sqt.prerm.debhelper >> debian/python3-sqt/DEBIAN/prerm chmod 0755 -- debian/python3-sqt/DEBIAN/prerm chown 0:0 -- debian/python3-sqt/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python3-sqt.substvars echo misc:Pre-Depends= >> debian/python3-sqt.substvars install -d debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/.debhelper/python3-sqt/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=python3-sqt-dbgsym "-DDepends=python3-sqt (= \${binary:Version})" "-DDescription=debug symbols for python3-sqt" -DBuild-Ids=70ecabd64bd247dff01e1ddccfc1e59cd7cff17c -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-sqt -ldebian/changelog -Tdebian/python3-sqt.substvars -Pdebian/python3-sqt dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-sqt: substitution variable ${python3:Versions} unused, but is defined chmod 0644 -- debian/python3-sqt/DEBIAN/control chown 0:0 -- debian/python3-sqt/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/python3-sqt >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-sqt/DEBIAN/md5sums chown 0:0 -- debian/python3-sqt/DEBIAN/md5sums cd debian/.debhelper/python3-sqt/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-sqt/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/.debhelper/python3-sqt/dbgsym-root .. dpkg-deb --build debian/python3-sqt .. dpkg-deb: building package 'python3-sqt-dbgsym' in '../python3-sqt-dbgsym_0.8.0-4_i386.deb'. dpkg-deb: building package 'python3-sqt' in '../python3-sqt_0.8.0-4_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-sqt_0.8.0-4_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from python-sqt-0.8.0/debian/source/options: --extend-diff-ignore=^[^/]*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/17965 and its subdirectories I: Current time: Wed Aug 18 00:25:11 -12 2021 I: pbuilder-time-stamp: 1629289511