I: pbuilder: network access will be disabled during build I: Current time: Sat Jan 7 19:13:13 -12 2023 I: pbuilder-time-stamp: 1673161993 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libtfbs-perl_0.7.1-2.dsc] I: copying [./libtfbs-perl_0.7.1.orig.tar.gz] I: copying [./libtfbs-perl_0.7.1-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Oct 16 06:50:53 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libtfbs-perl_0.7.1-2.dsc dpkg-source: info: extracting libtfbs-perl in libtfbs-perl-0.7.1 dpkg-source: info: unpacking libtfbs-perl_0.7.1.orig.tar.gz dpkg-source: info: unpacking libtfbs-perl_0.7.1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying spelling-errors.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2512113/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=16' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='335d4a73b71d486894f59288c6694b4e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2512113' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.6eHDhyDeuM/pbuilderrc_KAqa --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.6eHDhyDeuM/b1 --logfile b1/build.log libtfbs-perl_0.7.1-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos5-amd64 5.14.0-0.bpo.2-amd64 #1 SMP Debian 5.14.9-2~bpo11+1 (2021-10-10) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash -rwxr-xr-x 1 root root 109408 Feb 28 2019 date -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd -rwxr-xr-x 1 root root 93744 Feb 28 2019 df -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 35424 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln -rwxr-xr-x 1 root root 56760 Jul 26 2018 login -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 9 2019 more -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Dec 10 16:21 sh -> dash -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty -rwsr-xr-x 1 root root 63568 Jan 9 2019 su -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch -rwxr-xr-x 1 root root 35424 Feb 28 2019 true -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/2512113/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on pdl (>= 1:2.016); however: Package pdl is not installed. pbuilder-satisfydepends-dummy depends on bioperl; however: Package bioperl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbi-perl; however: Package libdbi-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdmainutils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libbsd0{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libcroco3{a} libdata-stag-perl{a} libdbi-perl{a} libdevel-stacktrace-perl{a} libelf1{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgd3{a} libgfortran5{a} libglib2.0-0{a} libgsl23{a} libgslcblas0{a} libhdf4-0-alt{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu63{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libjbig0{a} libjpeg62-turbo{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libpng16-16{a} libproj13{a} libsigsegv2{a} libssl1.1{a} libsub-uplevel-perl{a} libterm-readkey-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtiff5{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwebp6{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libxpm4{a} m4{a} man-db{a} netbase{a} openssl{a} pdl{a} perl-openssl-defaults{a} po-debconf{a} proj-data{a} sensible-utils{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libclone-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libglib2.0-data libgpm2 libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libterm-readline-gnu-perl libterm-readline-perl-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libyaml-perl lynx perl-doc perl-tk shared-mime-info wget xdg-user-dirs 0 packages upgraded, 101 newly installed, 0 to remove and 0 not upgraded. Need to get 47.0 MB of archives. After unpacking 154 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 libterm-readkey-perl amd64 2.38-1 [27.4 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u2 [380 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2+deb10u1 [261 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u2 [271 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u2 [757 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 libgd3 amd64 2.2.5-5.2 [136 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 libgslcblas0 amd64 2.5+dfsg-6 [101 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 libgsl23 amd64 2.5+dfsg-6 [880 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 libhdf4-0-alt amd64 4.2.13-4 [277 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 proj-data all 5.2.0-1 [6986 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 libproj13 amd64 5.2.0-1 [225 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 pdl amd64 1:2.019-5+b1 [3729 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 netbase all 5.6 [19.4 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 37 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 38 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 39 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 40 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 41 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 42 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 43 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 44 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 45 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 46 http://deb.debian.org/debian buster/main amd64 libio-string-perl all 1.08-3 [12.3 kB] Get: 47 http://deb.debian.org/debian buster/main amd64 libdata-stag-perl all 0.14-2 [448 kB] Get: 48 http://deb.debian.org/debian buster/main amd64 libbio-perl-perl all 1.7.2-3 [4553 kB] Get: 49 http://deb.debian.org/debian buster/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 50 http://deb.debian.org/debian buster/main amd64 libdevel-stacktrace-perl all 2.0300-1 [28.0 kB] Get: 51 http://deb.debian.org/debian buster/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get: 52 http://deb.debian.org/debian buster/main amd64 libtest-deep-perl all 1.128-1 [48.8 kB] Get: 53 http://deb.debian.org/debian buster/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get: 54 http://deb.debian.org/debian buster/main amd64 libalgorithm-diff-perl all 1.19.03-2 [47.9 kB] Get: 55 http://deb.debian.org/debian buster/main amd64 libtext-diff-perl all 1.45-1 [27.7 kB] Get: 56 http://deb.debian.org/debian buster/main amd64 libtest-differences-perl all 0.65-1 [18.1 kB] Get: 57 http://deb.debian.org/debian buster/main amd64 libsub-uplevel-perl all 0.2800-1 [16.3 kB] Get: 58 http://deb.debian.org/debian buster/main amd64 libtest-exception-perl all 0.43-1 [18.7 kB] Get: 59 http://deb.debian.org/debian buster/main amd64 libtest-warn-perl all 0.36-1 [16.2 kB] Get: 60 http://deb.debian.org/debian buster/main amd64 libtest-most-perl all 0.35-1 [24.5 kB] Get: 61 http://deb.debian.org/debian buster/main amd64 bioperl all 1.7.2-3 [418 kB] Get: 62 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u7 [1539 kB] Get: 63 http://deb.debian.org/debian buster/main amd64 openssl amd64 1.1.1d-0+deb10u7 [845 kB] Get: 64 http://deb.debian.org/debian buster/main amd64 ca-certificates all 20200601~deb10u2 [166 kB] Get: 65 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 66 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 67 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 68 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 69 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 70 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 71 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 72 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get: 73 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 74 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u2 [689 kB] Get: 75 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 76 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 77 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 78 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 79 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 80 http://deb.debian.org/debian buster/main amd64 libdbi-perl amd64 1.642-1+deb10u2 [775 kB] Get: 81 http://deb.debian.org/debian buster/main amd64 libencode-locale-perl all 1.05-1 [13.7 kB] Get: 82 http://deb.debian.org/debian buster/main amd64 libtimedate-perl all 2.3000-2+deb10u1 [38.1 kB] Get: 83 http://deb.debian.org/debian buster/main amd64 libhttp-date-perl all 6.02-1 [10.7 kB] Get: 84 http://deb.debian.org/debian buster/main amd64 libfile-listing-perl all 6.04-1 [10.3 kB] Get: 85 http://deb.debian.org/debian buster/main amd64 libhtml-tagset-perl all 3.20-3 [12.7 kB] Get: 86 http://deb.debian.org/debian buster/main amd64 liburi-perl all 1.76-1 [89.9 kB] Get: 87 http://deb.debian.org/debian buster/main amd64 libhtml-parser-perl amd64 3.72-3+b3 [105 kB] Get: 88 http://deb.debian.org/debian buster/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get: 89 http://deb.debian.org/debian buster/main amd64 libio-html-perl all 1.001-1 [17.6 kB] Get: 90 http://deb.debian.org/debian buster/main amd64 liblwp-mediatypes-perl all 6.02-1 [22.1 kB] Get: 91 http://deb.debian.org/debian buster/main amd64 libhttp-message-perl all 6.18-1 [77.8 kB] Get: 92 http://deb.debian.org/debian buster/main amd64 libhttp-cookies-perl all 6.04-1 [17.8 kB] Get: 93 http://deb.debian.org/debian buster/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get: 94 http://deb.debian.org/debian buster/main amd64 perl-openssl-defaults amd64 3 [6782 B] Get: 95 http://deb.debian.org/debian buster/main amd64 libnet-ssleay-perl amd64 1.85-2+b1 [308 kB] Get: 96 http://deb.debian.org/debian buster/main amd64 libio-socket-ssl-perl all 2.060-3 [207 kB] Get: 97 http://deb.debian.org/debian buster/main amd64 libnet-http-perl all 6.18-1 [24.5 kB] Get: 98 http://deb.debian.org/debian buster/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 99 http://deb.debian.org/debian buster/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 100 http://deb.debian.org/debian buster/main amd64 libwww-perl all 6.36-2 [188 kB] Get: 101 http://deb.debian.org/debian buster/main amd64 liblwp-protocol-https-perl all 6.07-2 [9242 B] Fetched 47.0 MB in 1s (64.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. 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Preparing to unpack .../061-libssl1.1_1.1.1d-0+deb10u7_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-0+deb10u7) ... Selecting previously unselected package openssl. Preparing to unpack .../062-openssl_1.1.1d-0+deb10u7_amd64.deb ... Unpacking openssl (1.1.1d-0+deb10u7) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../063-ca-certificates_20200601~deb10u2_all.deb ... Unpacking ca-certificates (20200601~deb10u2) ... Selecting previously unselected package libtool. Preparing to unpack .../064-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../065-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../066-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. 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Selecting previously unselected package libxml2:amd64. Preparing to unpack .../073-libxml2_2.9.4+dfsg1-7+deb10u2_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+deb10u2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../074-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package gettext. Preparing to unpack .../075-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../076-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../077-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../078-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package libdbi-perl:amd64. Preparing to unpack .../079-libdbi-perl_1.642-1+deb10u2_amd64.deb ... Unpacking libdbi-perl:amd64 (1.642-1+deb10u2) ... Selecting previously unselected package libencode-locale-perl. Preparing to unpack .../080-libencode-locale-perl_1.05-1_all.deb ... Unpacking libencode-locale-perl (1.05-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../081-libtimedate-perl_2.3000-2+deb10u1_all.deb ... Unpacking libtimedate-perl (2.3000-2+deb10u1) ... Selecting previously unselected package libhttp-date-perl. Preparing to unpack .../082-libhttp-date-perl_6.02-1_all.deb ... Unpacking libhttp-date-perl (6.02-1) ... Selecting previously unselected package libfile-listing-perl. Preparing to unpack .../083-libfile-listing-perl_6.04-1_all.deb ... Unpacking libfile-listing-perl (6.04-1) ... Selecting previously unselected package libhtml-tagset-perl. Preparing to unpack .../084-libhtml-tagset-perl_3.20-3_all.deb ... Unpacking libhtml-tagset-perl (3.20-3) ... Selecting previously unselected package liburi-perl. Preparing to unpack .../085-liburi-perl_1.76-1_all.deb ... Unpacking liburi-perl (1.76-1) ... Selecting previously unselected package libhtml-parser-perl. Preparing to unpack .../086-libhtml-parser-perl_3.72-3+b3_amd64.deb ... Unpacking libhtml-parser-perl (3.72-3+b3) ... Selecting previously unselected package libhtml-tree-perl. Preparing to unpack .../087-libhtml-tree-perl_5.07-2_all.deb ... Unpacking libhtml-tree-perl (5.07-2) ... Selecting previously unselected package libio-html-perl. Preparing to unpack .../088-libio-html-perl_1.001-1_all.deb ... Unpacking libio-html-perl (1.001-1) ... Selecting previously unselected package liblwp-mediatypes-perl. Preparing to unpack .../089-liblwp-mediatypes-perl_6.02-1_all.deb ... Unpacking liblwp-mediatypes-perl (6.02-1) ... Selecting previously unselected package libhttp-message-perl. Preparing to unpack .../090-libhttp-message-perl_6.18-1_all.deb ... Unpacking libhttp-message-perl (6.18-1) ... Selecting previously unselected package libhttp-cookies-perl. Preparing to unpack .../091-libhttp-cookies-perl_6.04-1_all.deb ... Unpacking libhttp-cookies-perl (6.04-1) ... Selecting previously unselected package libhttp-negotiate-perl. Preparing to unpack .../092-libhttp-negotiate-perl_6.01-1_all.deb ... Unpacking libhttp-negotiate-perl (6.01-1) ... Selecting previously unselected package perl-openssl-defaults:amd64. Preparing to unpack .../093-perl-openssl-defaults_3_amd64.deb ... Unpacking perl-openssl-defaults:amd64 (3) ... Selecting previously unselected package libnet-ssleay-perl. Preparing to unpack .../094-libnet-ssleay-perl_1.85-2+b1_amd64.deb ... Unpacking libnet-ssleay-perl (1.85-2+b1) ... Selecting previously unselected package libio-socket-ssl-perl. Preparing to unpack .../095-libio-socket-ssl-perl_2.060-3_all.deb ... Unpacking libio-socket-ssl-perl (2.060-3) ... Selecting previously unselected package libnet-http-perl. Preparing to unpack .../096-libnet-http-perl_6.18-1_all.deb ... Unpacking libnet-http-perl (6.18-1) ... Selecting previously unselected package libtry-tiny-perl. Preparing to unpack .../097-libtry-tiny-perl_0.30-1_all.deb ... Unpacking libtry-tiny-perl (0.30-1) ... Selecting previously unselected package libwww-robotrules-perl. Preparing to unpack .../098-libwww-robotrules-perl_6.02-1_all.deb ... Unpacking libwww-robotrules-perl (6.02-1) ... Selecting previously unselected package libwww-perl. Preparing to unpack .../099-libwww-perl_6.36-2_all.deb ... Unpacking libwww-perl (6.36-2) ... Selecting previously unselected package liblwp-protocol-https-perl. Preparing to unpack .../100-liblwp-protocol-https-perl_6.07-2_all.deb ... Unpacking liblwp-protocol-https-perl (6.07-2) ... Setting up libexpat1:amd64 (2.2.6-2+deb10u1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up proj-data (5.2.0-1) ... Setting up libgslcblas0:amd64 (2.5+dfsg-6) ... Setting up libtest-deep-perl (1.128-1) ... Setting up libmagic-mgc (1:5.35-4+deb10u2) ... Setting up libalgorithm-diff-perl (1.19.03-2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-2+deb10u3) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-0+deb10u7) ... Setting up libhtml-tagset-perl (3.20-3) ... Setting up liblwp-mediatypes-perl (6.02-1) ... Setting up libproj13:amd64 (5.2.0-1) ... Setting up libtry-tiny-perl (0.30-1) ... Setting up libmagic1:amd64 (1:5.35-4+deb10u2) ... Setting up perl-openssl-defaults:amd64 (3) ... Setting up gettext-base (0.19.8.1-9) ... Setting up libencode-locale-perl (1.05-1) ... Setting up file (1:5.35-4+deb10u2) ... Setting up libjbig0:amd64 (2.1-3.1+b2) ... Setting up libicu63:amd64 (63.1-6+deb10u1) ... Setting up libio-string-perl (1.08-3) ... Setting up autotools-dev (20180224.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libjpeg62-turbo:amd64 (1:1.5.2-2+deb10u1) ... Setting up libx11-data (2:1.6.7-1+deb10u2) ... Setting up libtext-diff-perl (1.45-1) ... Setting up libgsl23:amd64 (2.5+dfsg-6) ... Setting up libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up libio-html-perl (1.001-1) ... Setting up autopoint (0.19.8.1-9) ... Setting up libwebp6:amd64 (0.6.1-2+deb10u1) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up libhdf4-0-alt (4.2.13-4) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3000-2+deb10u1) ... Setting up libdata-stag-perl (0.14-2) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libsub-uplevel-perl (0.2800-1) ... Setting up netbase (5.6) ... Setting up libdevel-stacktrace-perl (2.0300-1) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u2) ... Setting up libbio-perl-perl (1.7.2-3) ... Setting up libterm-readkey-perl (2.38-1) ... Setting up openssl (1.1.1d-0+deb10u7) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u2) ... Setting up liburi-perl (1.76-1) ... Setting up libdbi-perl:amd64 (1.642-1+deb10u2) ... Setting up libnet-ssleay-perl (1.85-2+b1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libhttp-date-perl (6.02-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libfile-listing-perl (6.04-1) ... Setting up libtool (2.4.6-9) ... Setting up libtest-warn-perl (0.36-1) ... Setting up libtest-differences-perl (0.65-1) ... Setting up libnet-http-perl (6.18-1) ... Setting up m4 (1.4.18-2) ... Setting up libexception-class-perl (1.44-1) ... Setting up ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 137 added, 0 removed; done. Setting up libtest-exception-perl (0.43-1) ... Setting up libfreetype6:amd64 (2.9.1-3+deb10u2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libhtml-parser-perl (3.72-3+b3) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Setting up libio-socket-ssl-perl (2.060-3) ... Setting up libhttp-message-perl (6.18-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhttp-negotiate-perl (6.01-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libhttp-cookies-perl (6.04-1) ... Setting up libtest-most-perl (0.35-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up bioperl (1.7.2-3) ... Setting up po-debconf (1.0.21) ... Setting up libgd3:amd64 (2.2.5-5.2) ... Setting up pdl (1:2.019-5+b1) ... Setting up libwww-perl (6.36-2) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up liblwp-protocol-https-perl (6.07-2) ... Setting up debhelper (12.1.1) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for ca-certificates (20200601~deb10u2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libtfbs-perl-0.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libtfbs-perl_0.7.1-2_source.changes dpkg-buildpackage: info: source package libtfbs-perl dpkg-buildpackage: info: source version 0.7.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libtfbs-perl-0.7.1' rm --force Makefile Makefile.old make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libtfbs-perl-0.7.1' echo "n" | perl Makefile.PL INSTALLDIRS=vendor ------------------------------------------------- WARNING ------------------------------------------------- GD.pm does not seem to be installed. GD is reqired to produce "sequence logos" from information content matrices. If you need this functionality, please visit http://stein.cshl.org/WWW/software/GD/ for information on obtaining and installing GD. ------------------------------------------------- Do you have write access to a MySQL database server? [n] Checking if your kit is complete... Warning: the following files are missing in your kit: README Please inform the author. Writing MYMETA.yml and MYMETA.json Generating a Unix-style Makefile Writing Makefile for TFBS Writing MYMETA.yml and MYMETA.json /usr/bin/make OPTIMIZE="-g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security" LD_RUN_PATH="" OTHERLDFLAGS="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/libtfbs-perl-0.7.1' Skip blib/lib/TFBS/DB/LocalTRANSFAC.pm (unchanged) cp TFBS/PatternGen/AnnSpec.pm blib/lib/TFBS/PatternGen/AnnSpec.pm Skip blib/lib/TFBS/Tools/SetOperations.pm (unchanged) Skip blib/lib/TFBS/PatternGenI.pm (unchanged) Skip blib/lib/TFBS/Matrix/PWM.pm (unchanged) cp TFBS/DB/JASPAR6.pm blib/lib/TFBS/DB/JASPAR6.pm Skip blib/lib/TFBS/PatternI.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Elph/Motif.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Gibbs/Motif.pm (unchanged) cp TFBS/SitePair.pm blib/lib/TFBS/SitePair.pm cp TFBS/DB/JASPAR4.pm blib/lib/TFBS/DB/JASPAR4.pm Skip blib/lib/TFBS/PatternGen/YMF/Motif.pm (unchanged) cp TFBS/TFFM.pm blib/lib/TFBS/TFFM.pm cp TFBS/Matrix/ICM.pm blib/lib/TFBS/Matrix/ICM.pm cp TFBS/Run/ConservationProfileGenerator.pm blib/lib/TFBS/Run/ConservationProfileGenerator.pm Skip blib/lib/TFBS/PatternGen/Motif/Word.pm (unchanged) cp TFBS/MatrixSet.pm blib/lib/TFBS/MatrixSet.pm Skip blib/lib/TFBS/Matrix/_Alignment.pm (unchanged) Skip blib/lib/TFBS/PatternGen/MEME/Motif.pm (unchanged) cp TFBS/DB/JASPAR7.pm blib/lib/TFBS/DB/JASPAR7.pm cp TFBS/DB/JASPAR.pm blib/lib/TFBS/DB/JASPAR.pm Skip blib/lib/TFBS/Site.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Gibbs.pm (unchanged) cp TFBS/DB/FlatFileDir.pm blib/lib/TFBS/DB/FlatFileDir.pm Skip blib/lib/TFBS/SiteSet.pm (unchanged) Skip blib/lib/TFBS/PatternGen/AnnSpec/Motif.pm (unchanged) Skip blib/lib/TFBS/DB.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Motif/Matrix.pm (unchanged) cp TFBS/Matrix/Alignment.pm blib/lib/TFBS/Matrix/Alignment.pm Skip blib/lib/TFBS/PatternGen/MEME.pm (unchanged) cp TFBS/DB/TRANSFAC.pm blib/lib/TFBS/DB/TRANSFAC.pm Skip blib/lib/TFBS/DB/JASPAR2.pm (unchanged) cp TFBS/Matrix/PFM.pm blib/lib/TFBS/Matrix/PFM.pm Skip blib/lib/TFBS/PatternGen/SimplePFM.pm (unchanged) Skip blib/lib/TFBS/SitePairSet.pm (unchanged) cp TFBS/Matrix.pm blib/lib/TFBS/Matrix.pm cp TFBS/README.md blib/lib/TFBS/README.md cp TFBS/PatternGen/YMF.pm blib/lib/TFBS/PatternGen/YMF.pm cp TFBS/ConservationProfile.pm blib/lib/TFBS/ConservationProfile.pm Skip blib/lib/TFBS/PatternGen/Elph.pm (unchanged) cp TFBS/DB/JASPAR5.pm blib/lib/TFBS/DB/JASPAR5.pm cp TFBS/PatternGen.pm blib/lib/TFBS/PatternGen.pm cp TFBS/_Iterator/_MatrixSetIterator.pm blib/lib/TFBS/_Iterator/_MatrixSetIterator.pm Skip blib/lib/TFBS/Word.pm (unchanged) Skip blib/lib/TFBS/_Iterator.pm (unchanged) cp TFBS/_Iterator/_SiteSetIterator.pm blib/lib/TFBS/_Iterator/_SiteSetIterator.pm Skip blib/lib/TFBS/Word/Consensus.pm (unchanged) make[3]: Entering directory '/build/libtfbs-perl-0.7.1/Ext' Skip ../blib/lib/pwm_search.h (unchanged) Skip ../blib/lib/TFBS/Ext/pwmsearch.pm (unchanged) cp lib/pwm_searchPFF.c ../blib/lib/pwm_searchPFF.c Running Mkbootstrap for pwmsearch () chmod 644 "pwmsearch.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 "/usr/bin/perl" "/usr/share/perl/5.28.1/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.28/ExtUtils/typemap' pwmsearch.xs > pwmsearch.xsc Please specify prototyping behavior for pwmsearch.xs (see perlxs manual) mv pwmsearch.xsc pwmsearch.c x86_64-linux-gnu-gcc -c -I. -I./lib -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -ffile-prefix-map=/build/libtfbs-perl-0.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -DVERSION=\"0.2\" -DXS_VERSION=\"0.2\" -fPIC "-I/usr/lib/x86_64-linux-gnu/perl/5.28/CORE" pwmsearch.c In file included from pwmsearch.xs:4: ./lib/pwm_searchPFF.c: In function 'do_search': ./lib/pwm_searchPFF.c:55:7: warning: implicit declaration of function 'announce' [-Wimplicit-function-declaration] announce("+++\nEntering main.\n+++\n"); ^~~~~~~~ ./lib/pwm_searchPFF.c:74:9: warning: implicit declaration of function 'get_matrix'; did you mean 'getchar'? [-Wimplicit-function-declaration] if ( get_matrix(&args,pwm) ) ^~~~~~~~~~ getchar ./lib/pwm_searchPFF.c:90:14: warning: implicit declaration of function 'loop_on_seqs' [-Wimplicit-function-declaration] else if ( loop_on_seqs(&args,pwm,fp,outfp) ) ^~~~~~~~~~~~ ./lib/pwm_searchPFF.c: At top level: ./lib/pwm_searchPFF.c:159:1: warning: return type defaults to 'int' [-Wimplicit-int] best_pull(pargs,pbase,pstrand,pscore) ^~~~~~~~~ ./lib/pwm_searchPFF.c: In function 'do_seq': ./lib/pwm_searchPFF.c:229:18: warning: implicit declaration of function 'save_hit'; did you mean 'save_hptr'? [-Wimplicit-function-declaration] if ( save_hit(base,0,forward_score,hits,&nhit) ) ^~~~~~~~ save_hptr ./lib/pwm_searchPFF.c:239:20: warning: implicit declaration of function 'output'; did you mean 'getpt'? [-Wimplicit-function-declaration] else if ( output(pargs,seqid,base,seq,0,forward_score,outfp) ) ^~~~~~ getpt ./lib/pwm_searchPFF.c: At top level: ./lib/pwm_searchPFF.c:526:1: warning: return type defaults to 'int' [-Wimplicit-int] get_sequence(fp,seq_id,sequence) ^~~~~~~~~~~~ rm -f ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so x86_64-linux-gnu-gcc -shared -L/usr/local/lib -fstack-protector-strong pwmsearch.o -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -o ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so \ -lm \ chmod 755 ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so Manifying 1 pod document make[3]: Leaving directory '/build/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents make[2]: Leaving directory '/build/libtfbs-perl-0.7.1' make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_auto_build make -j16 make[1]: Entering directory '/build/libtfbs-perl-0.7.1' make[2]: Entering directory '/build/libtfbs-perl-0.7.1/Ext' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Manifying 1 pod document make[2]: Leaving directory '/build/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libtfbs-perl-0.7.1' prove --blib t/01_Matrix.t t/02_Search.t t/03_DB_FlatFileDir.t t/05_DB_JASPAR.t t/06_SimplePFM.t t/07_AnnSpec.t t/07_Elph.t t/07_Gibbs.t t/07_MEME.t t/08_DB_LocalTRANSFAC.t t/09_Word_Consensus.t t/10_Tools_SetOperations.t Ext/t/*.t Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/01_Matrix.t ............... ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/02_Search.t ............... ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/03_DB_FlatFileDir.t ....... ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/05_DB_JASPAR.t ............ ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/06_SimplePFM.t ............ ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/07_AnnSpec.t .............. ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/07_Elph.t ................. ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/07_Gibbs.t ................ ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/07_MEME.t ................. ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/08_DB_LocalTRANSFAC.t ..... ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/09_Word_Consensus.t ....... ok Possible precedence issue with control flow operator at /build/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 207. t/10_Tools_SetOperations.t .. ok Ext/t/pwmsearch.t ........... ok All tests successful. Files=13, Tests=45, 5 wallclock secs ( 0.07 usr 0.02 sys + 3.95 cusr 0.44 csys = 4.48 CPU) Result: PASS make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j16 install DESTDIR=/build/libtfbs-perl-0.7.1/debian/libtfbs-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libtfbs-perl-0.7.1' make[2]: Entering directory '/build/libtfbs-perl-0.7.1/Ext' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Manifying 1 pod document make[2]: Leaving directory '/build/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/TFBS/Ext/pwmsearch/pwmsearch.so Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/TFBS/Ext/pwmsearch/pwmsearch.bundle Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/pwm_searchPFF.c Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/pwm_search.h Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/ConservationProfile.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/README.md Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/MatrixSet.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/TFFM.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/SitePair.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/_Iterator.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Word.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/SiteSet.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/SitePairSet.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Site.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternI.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGenI.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Run/ConservationProfileGenerator.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/_Iterator/_SiteSetIterator.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/_Iterator/_MatrixSetIterator.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Word/Consensus.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Tools/SetOperations.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/YMF.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/AnnSpec.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/SimplePFM.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/MEME.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Gibbs.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Elph.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/YMF/Motif.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Motif/Word.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Motif/Matrix.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/MEME/Motif.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Gibbs/Motif.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/Elph/Motif.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/PatternGen/AnnSpec/Motif.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix/PFM.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix/Alignment.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix/ICM.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix/_Alignment.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Matrix/PWM.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/Ext/pwmsearch.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR5.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/TRANSFAC.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/FlatFileDir.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR7.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR4.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR6.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/LocalTRANSFAC.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/TFBS/DB/JASPAR2.pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::TFFM.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::Alignment.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR7.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR6.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR5.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word::Consensus.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SiteSet.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePairSet.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePair.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Site.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternI.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::MatrixSet.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PWM.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PFM.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::ICM.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR4.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR2.3pm Installing /build/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/build/libtfbs-perl-0.7.1' dh_installexamples mkdir -p debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext cp -a Ext/t debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_installman debian/rules override_dh_perl make[1]: Entering directory '/build/libtfbs-perl-0.7.1' dh_perl dh_pdl make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/libtfbs-perl-0.7.1' dh_fixperms find debian -name pwmsearch.bundle -exec chmod -x \{\} \; make[1]: Leaving directory '/build/libtfbs-perl-0.7.1' dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.28/auto/TFBS/Ext/pwmsearch/pwmsearch.so was not linked against libm.so.6 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtfbs-perl-dbgsym' in '../libtfbs-perl-dbgsym_0.7.1-2_amd64.deb'. dpkg-deb: building package 'libtfbs-perl' in '../libtfbs-perl_0.7.1-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libtfbs-perl_0.7.1-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2512113 and its subdirectories I: Current time: Sat Jan 7 19:14:02 -12 2023 I: pbuilder-time-stamp: 1673162042