I: pbuilder: network access will be disabled during build I: Current time: Tue Oct 5 14:55:37 -12 2021 I: pbuilder-time-stamp: 1633488937 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-biom-format_2.1.7+dfsg-2.dsc] I: copying [./python-biom-format_2.1.7+dfsg.orig.tar.xz] I: copying [./python-biom-format_2.1.7+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Feb 13 09:26:21 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./python-biom-format_2.1.7+dfsg-2.dsc dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.7+dfsg dpkg-source: info: unpacking python-biom-format_2.1.7+dfsg.orig.tar.xz dpkg-source: info: unpacking python-biom-format_2.1.7+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying enable_sloppy_sphinx_build.patch dpkg-source: info: applying sphinx_1.6.patch dpkg-source: info: applying sphinx.ext.pngmath.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/13698/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='13698' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.ODxCnZDk4T/pbuilderrc_Jq20 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.ODxCnZDk4T/b1 --logfile b1/build.log python-biom-format_2.1.7+dfsg-2.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled13-arm64 4.4.0-189-generic #219-Ubuntu SMP Tue Aug 11 12:24:40 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 3 02:48 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/13698/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 12~), dh-python, cython, python-dev, python-numpy, python-scipy, python-h5py, help2man, python-click, python-cogent, python-future, python-nose, python-pandas, python-setuptools, bash-completion, cython3, python3-all-dev, python3-click, python3-future, python3-h5py, python3-nose, python3-numpy, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 12~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on cython; however: Package cython is not installed. pbuilder-satisfydepends-dummy depends on python-dev; however: Package python-dev is not installed. pbuilder-satisfydepends-dummy depends on python-numpy; however: Package python-numpy is not installed. pbuilder-satisfydepends-dummy depends on python-scipy; however: Package python-scipy is not installed. pbuilder-satisfydepends-dummy depends on python-h5py; however: Package python-h5py is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on python-click; however: Package python-click is not installed. pbuilder-satisfydepends-dummy depends on python-cogent; however: Package python-cogent is not installed. pbuilder-satisfydepends-dummy depends on python-future; however: Package python-future is not installed. pbuilder-satisfydepends-dummy depends on python-nose; however: Package python-nose is not installed. pbuilder-satisfydepends-dummy depends on python-pandas; however: Package python-pandas is not installed. pbuilder-satisfydepends-dummy depends on python-setuptools; however: Package python-setuptools is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-future; however: Package python3-future is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-nose; however: Package python3-nose is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdmainutils{a} ca-certificates{a} cython{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbsd0{a} libcroco3{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfreetype6{a} libgfortran5{a} libglib2.0-0{a} libhdf5-103{a} libicu63{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libncurses6{a} libpipeline1{a} libpng16-16{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.7{a} libpython3.7-dev{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mime-support{a} openssl{a} po-debconf{a} python{a} python-babel-localedata{a} python-backports.functools-lru-cache{a} python-click{a} python-cogent{a} python-colorama{a} python-configparser{a} python-cycler{a} python-dateutil{a} python-decorator{a} python-dev{a} python-future{a} python-h5py{a} python-kiwisolver{a} python-matplotlib{a} python-matplotlib2-data{a} python-minimal{a} python-nose{a} python-numpy{a} python-pandas{a} python-pandas-lib{a} python-pkg-resources{a} python-pyparsing{a} python-scipy{a} python-setuptools{a} python-six{a} python-subprocess32{a} python-tz{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-click{a} python3-colorama{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-future{a} python3-h5py{a} python3-idna{a} python3-imagesize{a} python3-jinja2{a} python3-lib2to3{a} python3-markupsafe{a} python3-minimal{a} python3-nose{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pkg-resources{a} python3-pygments{a} python3-pyparsing{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sphinx{a} python3-tz{a} python3-urllib3{a} python3.7{a} python3.7-dev{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} ttf-bitstream-vera{a} xml-core{a} The following packages are RECOMMENDED but will NOT be installed: blast2 cd-hit clearcut curl dialign javascript-common libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libpaper-utils lynx muscle python-bs4 python-html5lib python-lxml python-numexpr python-openpyxl python-pil python-statsmodels python-tables python-tk python-xlrd python-xlwt python3-bs4 python3-html5lib python3-lxml python3-matplotlib python3-numexpr python3-pil python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 156 newly installed, 0 to remove and 0 not upgraded. Need to get 129 MB of archives. After unpacking 478 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libpython2.7-minimal arm64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 python2.7-minimal arm64 2.7.16-2+deb10u1 [1292 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 python2-minimal arm64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python-minimal arm64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython2.7-stdlib arm64 2.7.16-2+deb10u1 [1890 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python2.7 arm64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython2-stdlib arm64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython-stdlib arm64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python2 arm64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 python arm64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 liblocale-gettext-perl arm64 1.07-3+b4 [18.8 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u2 [588 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u2 [1404 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u2 [1641 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u2 [330 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 sgml-base all 1.29 [14.8 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 bash-completion all 1:2.8-6 [208 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 openssl arm64 1.1.1d-0+deb10u3 [823 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 ca-certificates all 20190110 [157 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 cython arm64 0.29.2-2 [1244 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 cython3 arm64 0.29.2-2 [1259 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 65 http://deb.debian.org/debian buster/main arm64 python3-distutils all 3.7.3-1 [142 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 dh-python all 3.20190308 [99.3 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 xml-core all 0.18+nmu1 [23.8 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 docutils-common all 0.14+dfsg-4 [167 kB] Get: 69 http://deb.debian.org/debian buster/main arm64 fonts-lyx all 2.3.2-1 [199 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 help2man arm64 1.47.8 [177 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 libaec0 arm64 1.0.2-1 [18.8 kB] Get: 72 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 libblas3 arm64 3.8.0-2 [100 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libpng16-16 arm64 1.6.36-6 [287 kB] Get: 76 http://deb.debian.org/debian buster/main arm64 libfreetype6 arm64 2.9.1-3+deb10u1 [355 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libsz2 arm64 1.0.2-1 [6456 B] Get: 78 http://deb.debian.org/debian buster/main arm64 libhdf5-103 arm64 1.10.4+repack-10 [1168 kB] Get: 79 http://deb.debian.org/debian buster/main arm64 libjs-jquery all 3.3.1~dfsg-3 [332 kB] Get: 80 http://deb.debian.org/debian buster/main arm64 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 libjs-underscore all 1.9.1~dfsg-1 [99.4 kB] Get: 82 http://deb.debian.org/debian buster/main arm64 libjs-sphinxdoc all 1.8.4-1 [95.9 kB] Get: 83 http://deb.debian.org/debian buster/main arm64 liblapack3 arm64 3.8.0-2 [1489 kB] Get: 84 http://deb.debian.org/debian buster/main arm64 libpython2.7 arm64 2.7.16-2+deb10u1 [958 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 libpython2.7-dev arm64 2.7.16-2+deb10u1 [31.5 MB] Get: 86 http://deb.debian.org/debian buster/main arm64 libpython2-dev arm64 2.7.16-1 [20.9 kB] Get: 87 http://deb.debian.org/debian buster/main arm64 libpython-dev arm64 2.7.16-1 [20.9 kB] Get: 88 http://deb.debian.org/debian buster/main arm64 libpython3.7 arm64 3.7.3-2+deb10u2 [1371 kB] Get: 89 http://deb.debian.org/debian buster/main arm64 libpython3.7-dev arm64 3.7.3-2+deb10u2 [2380 kB] Get: 90 http://deb.debian.org/debian buster/main arm64 libpython3-dev arm64 3.7.3-1 [20.1 kB] Get: 91 http://deb.debian.org/debian buster/main arm64 libpython3-all-dev arm64 3.7.3-1 [1068 B] Get: 92 http://deb.debian.org/debian buster/main arm64 python-babel-localedata all 2.6.0+dfsg.1-1 [4083 kB] Get: 93 http://deb.debian.org/debian buster/main arm64 python-backports.functools-lru-cache all 1.5-3 [6704 B] Get: 94 http://deb.debian.org/debian buster/main arm64 python-colorama all 0.3.7-1 [25.7 kB] Get: 95 http://deb.debian.org/debian buster/main arm64 python-click all 7.0-1 [73.5 kB] Get: 96 http://deb.debian.org/debian buster/main arm64 python-pkg-resources all 40.8.0-1 [182 kB] Get: 97 http://deb.debian.org/debian buster/main arm64 python-numpy arm64 1:1.16.2-1 [1975 kB] Get: 98 http://deb.debian.org/debian buster/main arm64 python-six all 1.12.0-1 [15.7 kB] Get: 99 http://deb.debian.org/debian buster/main arm64 python-dateutil all 2.7.3-3 [76.8 kB] Get: 100 http://deb.debian.org/debian buster/main arm64 ttf-bitstream-vera all 1.10-8 [352 kB] Get: 101 http://deb.debian.org/debian buster/main arm64 python-matplotlib2-data all 2.2.3-6 [4124 kB] Get: 102 http://deb.debian.org/debian buster/main arm64 python-pyparsing all 2.2.0+dfsg1-2 [89.5 kB] Get: 103 http://deb.debian.org/debian buster/main arm64 python-tz all 2019.1-1 [33.6 kB] Get: 104 http://deb.debian.org/debian buster/main arm64 python-cycler all 0.10.0-1 [7448 B] Get: 105 http://deb.debian.org/debian buster/main arm64 python-kiwisolver arm64 1.0.1-2+b1 [64.0 kB] Get: 106 http://deb.debian.org/debian buster/main arm64 python-subprocess32 arm64 3.5.3-1 [29.6 kB] Get: 107 http://deb.debian.org/debian buster/main arm64 python-matplotlib arm64 2.2.3-6 [5033 kB] Get: 108 http://deb.debian.org/debian buster/main arm64 python-cogent arm64 1.9-14 [2436 kB] Get: 109 http://deb.debian.org/debian buster/main arm64 python-configparser all 3.5.0b2-1 [59.2 kB] Get: 110 http://deb.debian.org/debian buster/main arm64 python-decorator all 4.3.0-1.1 [14.4 kB] Get: 111 http://deb.debian.org/debian buster/main arm64 python2.7-dev arm64 2.7.16-2+deb10u1 [296 kB] Get: 112 http://deb.debian.org/debian buster/main arm64 python2-dev arm64 2.7.16-1 [1216 B] Get: 113 http://deb.debian.org/debian buster/main arm64 python-dev arm64 2.7.16-1 [1192 B] Get: 114 http://deb.debian.org/debian buster/main arm64 python-future all 0.16.0-1 [348 kB] Get: 115 http://deb.debian.org/debian buster/main arm64 python-h5py arm64 2.8.0-3 [572 kB] Get: 116 http://deb.debian.org/debian buster/main arm64 python-nose all 1.3.7-4 [132 kB] Get: 117 http://deb.debian.org/debian buster/main arm64 python-pandas-lib arm64 0.23.3+dfsg-3 [2611 kB] Get: 118 http://deb.debian.org/debian buster/main arm64 python-pandas all 0.23.3+dfsg-3 [1750 kB] Get: 119 http://deb.debian.org/debian buster/main arm64 python-scipy arm64 1.1.0-7 [9327 kB] Get: 120 http://deb.debian.org/debian buster/main arm64 python-setuptools all 40.8.0-1 [382 kB] Get: 121 http://deb.debian.org/debian buster/main arm64 python3-alabaster all 0.7.8-1 [18.4 kB] Get: 122 http://deb.debian.org/debian buster/main arm64 python3-all arm64 3.7.3-1 [1068 B] Get: 123 http://deb.debian.org/debian buster/main arm64 python3.7-dev arm64 3.7.3-2+deb10u2 [509 kB] Get: 124 http://deb.debian.org/debian buster/main arm64 python3-dev arm64 3.7.3-1 [1264 B] Get: 125 http://deb.debian.org/debian buster/main arm64 python3-all-dev arm64 3.7.3-1 [1064 B] Get: 126 http://deb.debian.org/debian buster/main arm64 python3-pkg-resources all 40.8.0-1 [153 kB] Get: 127 http://deb.debian.org/debian buster/main arm64 python3-tz all 2019.1-1 [27.1 kB] Get: 128 http://deb.debian.org/debian buster/main arm64 python3-babel all 2.6.0+dfsg.1-1 [96.7 kB] Get: 129 http://deb.debian.org/debian buster/main arm64 python3-certifi all 2018.8.24-1 [140 kB] Get: 130 http://deb.debian.org/debian buster/main arm64 python3-chardet all 3.0.4-3 [80.5 kB] Get: 131 http://deb.debian.org/debian buster/main arm64 python3-colorama all 0.3.7-1 [18.1 kB] Get: 132 http://deb.debian.org/debian buster/main arm64 python3-click all 7.0-1 [73.6 kB] Get: 133 http://deb.debian.org/debian buster/main arm64 python3-six all 1.12.0-1 [15.7 kB] Get: 134 http://deb.debian.org/debian buster/main arm64 python3-dateutil all 2.7.3-3 [64.5 kB] Get: 135 http://deb.debian.org/debian buster/main arm64 python3-decorator all 4.3.0-1.1 [14.5 kB] Get: 136 http://deb.debian.org/debian buster/main arm64 python3-roman all 2.0.0-3 [8768 B] Get: 137 http://deb.debian.org/debian buster/main arm64 python3-docutils all 0.14+dfsg-4 [378 kB] Get: 138 http://deb.debian.org/debian buster/main arm64 python3-future all 0.16.0-1 [346 kB] Get: 139 http://deb.debian.org/debian buster/main arm64 python3-numpy arm64 1:1.16.2-1 [1991 kB] Get: 140 http://deb.debian.org/debian buster/main arm64 python3-h5py arm64 2.8.0-3 [783 kB] Get: 141 http://deb.debian.org/debian buster/main arm64 python3-idna all 2.6-1 [34.3 kB] Get: 142 http://deb.debian.org/debian buster/main arm64 python3-imagesize all 1.0.0-1 [4960 B] Get: 143 http://deb.debian.org/debian buster/main arm64 python3-markupsafe arm64 1.1.0-1 [14.8 kB] Get: 144 http://deb.debian.org/debian buster/main arm64 python3-jinja2 all 2.10-2 [106 kB] Get: 145 http://deb.debian.org/debian buster/main arm64 python3-nose all 1.3.7-4 [132 kB] Get: 146 http://deb.debian.org/debian buster/main arm64 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB] Get: 147 http://deb.debian.org/debian buster/main arm64 python3-packaging all 19.0-1 [20.5 kB] Get: 148 http://deb.debian.org/debian buster/main arm64 python3-pandas-lib arm64 0.23.3+dfsg-3 [2677 kB] Get: 149 http://deb.debian.org/debian buster/main arm64 python3-pandas all 0.23.3+dfsg-3 [1750 kB] Get: 150 http://deb.debian.org/debian buster/main arm64 python3-pygments all 2.3.1+dfsg-1 [594 kB] Get: 151 http://deb.debian.org/debian buster/main arm64 python3-urllib3 all 1.24.1-1 [97.1 kB] Get: 152 http://deb.debian.org/debian buster/main arm64 python3-requests all 2.21.0-1 [66.9 kB] Get: 153 http://deb.debian.org/debian buster/main arm64 python3-scipy arm64 1.1.0-7 [9306 kB] Get: 154 http://deb.debian.org/debian buster/main arm64 python3-setuptools all 40.8.0-1 [306 kB] Get: 155 http://deb.debian.org/debian buster/main arm64 sphinx-common all 1.8.4-1 [500 kB] Get: 156 http://deb.debian.org/debian buster/main arm64 python3-sphinx all 1.8.4-1 [481 kB] Fetched 129 MB in 14s (9211 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:arm64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../08-python2-minimal_2.7.16-1_arm64.deb ... Unpacking python2-minimal (2.7.16-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../09-python-minimal_2.7.16-1_arm64.deb ... Unpacking python-minimal (2.7.16-1) ... Selecting previously unselected package libssl1.1:arm64. Preparing to unpack .../10-libssl1.1_1.1.1d-0+deb10u3_arm64.deb ... Unpacking libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Selecting previously unselected package mime-support. Preparing to unpack .../11-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../12-libexpat1_2.2.6-2+deb10u1_arm64.deb ... Unpacking libexpat1:arm64 (2.2.6-2+deb10u1) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:arm64. Preparing to unpack .../14-libreadline7_7.0-5_arm64.deb ... Unpacking libreadline7:arm64 (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:arm64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:arm64. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython2-stdlib:arm64 (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:arm64. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_arm64.deb ... Unpacking libpython-stdlib:arm64 (2.7.16-1) ... Setting up libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20631 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_arm64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20664 files and directories currently installed.) Preparing to unpack .../python_2.7.16-1_arm64.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../liblocale-gettext-perl_1.07-3+b4_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-3+b4) ... Selecting previously unselected package libpython3.7-minimal:arm64. Preparing to unpack .../libpython3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7-minimal. Preparing to unpack .../python3.7-minimal_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7-minimal (3.7.3-2+deb10u2) ... Setting up libssl1.1:arm64 (1.1.1d-0+deb10u3) ... Setting up libpython3.7-minimal:arm64 (3.7.3-2+deb10u2) ... Setting up libexpat1:arm64 (2.2.6-2+deb10u1) ... Setting up python3.7-minimal (3.7.3-2+deb10u2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20933 files and directories currently installed.) Preparing to unpack .../python3-minimal_3.7.3-1_arm64.deb ... Unpacking python3-minimal (3.7.3-1) ... Selecting previously unselected package libmpdec2:arm64. Preparing to unpack .../libmpdec2_2.4.2-2_arm64.deb ... Unpacking libmpdec2:arm64 (2.4.2-2) ... Selecting previously unselected package libpython3.7-stdlib:arm64. Preparing to unpack .../libpython3.7-stdlib_3.7.3-2+deb10u2_arm64.deb ... Unpacking libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Selecting previously unselected package python3.7. Preparing to unpack .../python3.7_3.7.3-2+deb10u2_arm64.deb ... Unpacking python3.7 (3.7.3-2+deb10u2) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../libpython3-stdlib_3.7.3-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.7.3-1) ... Setting up python3-minimal (3.7.3-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21345 files and directories currently installed.) Preparing to unpack .../000-python3_3.7.3-1_arm64.deb ... Unpacking python3 (3.7.3-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../001-sgml-base_1.29_all.deb ... Unpacking sgml-base (1.29) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package bash-completion. Preparing to unpack .../003-bash-completion_1%3a2.8-6_all.deb ... Unpacking bash-completion (1:2.8-6) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../005-libmagic1_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking libmagic1:arm64 (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.35-4+deb10u1_arm64.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.19.8.1-9_arm64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../008-libsigsegv2_2.12-2_arm64.deb ... Unpacking libsigsegv2:arm64 (2.12-2) ... 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Unpacking python3-urllib3 (1.24.1-1) ... Selecting previously unselected package python3-requests. Preparing to unpack .../122-python3-requests_2.21.0-1_all.deb ... Unpacking python3-requests (2.21.0-1) ... Selecting previously unselected package python3-scipy. Preparing to unpack .../123-python3-scipy_1.1.0-7_arm64.deb ... Unpacking python3-scipy (1.1.0-7) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../124-python3-setuptools_40.8.0-1_all.deb ... Unpacking python3-setuptools (40.8.0-1) ... Selecting previously unselected package sphinx-common. Preparing to unpack .../125-sphinx-common_1.8.4-1_all.deb ... Unpacking sphinx-common (1.8.4-1) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../126-python3-sphinx_1.8.4-1_all.deb ... Unpacking python3-sphinx (1.8.4-1) ... Setting up libpipeline1:arm64 (1.5.1-2) ... Setting up ttf-bitstream-vera (1.10-8) ... Setting up mime-support (3.62) ... Setting up libmagic-mgc (1:5.35-4+deb10u1) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:arm64 (2.58.3-2+deb10u2) ... No schema files found: doing nothing. Setting up fonts-lyx (2.3.2-1) ... Setting up libmagic1:arm64 (1:5.35-4+deb10u1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libaec0:arm64 (1.0.2-1) ... Setting up libicu63:arm64 (63.1-6+deb10u1) ... Setting up python-babel-localedata (2.6.0+dfsg.1-1) ... Setting up autotools-dev (20180224.1) ... Setting up libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Setting up bash-completion (1:2.8-6) ... Setting up libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up libpng16-16:arm64 (1.6.36-6) ... Setting up autopoint (0.19.8.1-9) ... Setting up libgfortran5:arm64 (8.3.0-6) ... Setting up python-matplotlib2-data (2.2.3-6) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up sgml-base (1.29) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libjs-jquery (3.3.1~dfsg-3) ... Setting up openssl (1.1.1d-0+deb10u3) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libsz2:arm64 (1.0.2-1) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Setting up libpython3.7:arm64 (3.7.3-2+deb10u2) ... Setting up libtool (2.4.6-9) ... Setting up libpython3.7-dev:arm64 (3.7.3-2+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Setting up help2man (1.47.8) ... Setting up ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 128 added, 0 removed; done. Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libfreetype6:arm64 (2.9.1-3+deb10u1) ... Setting up libhdf5-103:arm64 (1.10.4+repack-10) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:arm64 (0.6.12-3) ... Setting up libjs-sphinxdoc (1.8.4-1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up xml-core (0.18+nmu1) ... Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up libpython2.7:arm64 (2.7.16-2+deb10u1) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libpython2.7-dev:arm64 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up libpython3-dev:arm64 (3.7.3-1) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-markupsafe (1.1.0-1) ... Setting up python2 (2.7.16-1) ... Setting up python3.7-dev (3.7.3-2+deb10u2) ... Setting up python3-tz (2019.1-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-six (1.12.0-1) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up python3-roman (2.0.0-3) ... Setting up python3-decorator (4.3.0-1.1) ... Setting up python3-jinja2 (2.10-2) ... Setting up python3-pygments (2.3.1+dfsg-1) ... Setting up python3-pyparsing (2.2.0+dfsg1-2) ... Setting up python3-certifi (2018.8.24-1) ... Setting up libpython3-all-dev:arm64 (3.7.3-1) ... Setting up sphinx-common (1.8.4-1) ... Setting up python3-idna (2.6-1) ... Setting up cython3 (0.29.2-2) ... Setting up python3-urllib3 (1.24.1-1) ... Setting up python3-dateutil (2.7.3-3) ... Setting up libpython2-dev:arm64 (2.7.16-1) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python (2.7.16-1) ... Setting up python3-imagesize (1.0.0-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python3-pkg-resources (40.8.0-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up dh-python (3.20190308) ... Setting up cython (0.29.2-2) ... Setting up python-colorama (0.3.7-1) ... Setting up python2-dev (2.7.16-1) ... Setting up python3-setuptools (40.8.0-1) ... Setting up python3-babel (2.6.0+dfsg.1-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.3.7-1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up python3-alabaster (0.7.8-1) ... Setting up po-debconf (1.0.21) ... Setting up python3-all (3.7.3-1) ... Setting up python3-click (7.0-1) ... Setting up python3-nose (1.3.7-4) ... Setting up python-decorator (4.3.0-1.1) ... Setting up libpython-dev:arm64 (2.7.16-1) ... Setting up python-six (1.12.0-1) ... Setting up python-pyparsing (2.2.0+dfsg1-2) ... Setting up python-dateutil (2.7.3-3) ... Setting up python3-packaging (19.0-1) ... Setting up python3-chardet (3.0.4-3) ... Setting up python-configparser (3.5.0b2-1) ... Setting up python-click (7.0-1) ... Setting up python-subprocess32 (3.5.3-1) ... Setting up python3-dev (3.7.3-1) ... Setting up python3-requests (2.21.0-1) ... Setting up python-setuptools (40.8.0-1) ... Setting up python-backports.functools-lru-cache (1.5-3) ... Setting up python3-numpy (1:1.16.2-1) ... Setting up python-tz (2019.1-1) ... Setting up python-kiwisolver (1.0.1-2+b1) ... Setting up python-future (0.16.0-1) ... update-alternatives: using /usr/bin/python2-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python2-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python3-future (0.16.0-1) ... update-alternatives: using /usr/bin/python3-futurize to provide /usr/bin/futurize (futurize) in auto mode update-alternatives: using /usr/bin/python3-pasteurize to provide /usr/bin/pasteurize (pasteurize) in auto mode Setting up python-dev (2.7.16-1) ... Setting up python3-all-dev (3.7.3-1) ... Setting up python3-scipy (1.1.0-7) ... Setting up python-numpy (1:1.16.2-1) ... Setting up python-nose (1.3.7-4) ... Setting up python3-pandas-lib (0.23.3+dfsg-3) ... Setting up python-cycler (0.10.0-1) ... Setting up python3-pandas (0.23.3+dfsg-3) ... Setting up python3-h5py (2.8.0-3) ... Setting up python-scipy (1.1.0-7) ... Setting up python-pandas-lib (0.23.3+dfsg-3) ... Setting up python-h5py (2.8.0-3) ... Setting up python-matplotlib (2.2.3-6) ... Setting up python-cogent (1.9-14) ... Setting up python-pandas (0.23.3+dfsg-3) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for sgml-base (1.29) ... Setting up docutils-common (0.14+dfsg-4) ... Processing triggers for sgml-base (1.29) ... Setting up python3-docutils (0.14+dfsg-4) ... update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode Setting up python3-sphinx (1.8.4-1) ... update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode Processing triggers for ca-certificates (20190110) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/python-biom-format-2.1.7+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package python-biom-format dpkg-buildpackage: info: source version 2.1.7+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py clean running clean removing '/build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it pybuild --clean --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py clean running clean removing '/build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build' (and everything under it) 'build/bdist.linux-arm64' does not exist -- can't clean it 'build/scripts-3.7' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars debian/biom-format-tools.substvars debian/files rm -fr -- debian/python-biom-format/ debian/tmp/ debian/python3-biom-format/ debian/python-biom-format-doc/ debian/biom-format-tools/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure --test-nose -i python{version} -p 2.7 I: pybuild base:217: python2.7 setup.py config running config pybuild --configure --test-nose -i python{version} -p 3.7 I: pybuild base:217: python3.7 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' # arch USE_CYTHON=true dh_auto_build pybuild --build --test-nose -i python{version} -p 2.7 I: pybuild base:217: /usr/bin/python setup.py build /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.7+dfsg/biom/_filter.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.7+dfsg/biom/_subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/python-biom-format-2.1.7+dfsg/biom/_transform.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running build running build_py creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/parse.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/exception.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/err.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/test_util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/test_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/test_parse.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/test_err.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/long_lines.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests copying biom/tests/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli running egg_info creating biom_format.egg-info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_filter.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_subsample.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom copying biom/_transform.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables copying biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data running build_ext building 'biom._filter' extension creating build creating build/temp.linux-arm64-2.7 creating build/temp.linux-arm64-2.7/biom aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_filter.c -o build/temp.linux-arm64-2.7/biom/_filter.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:632: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-QCkEc0/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-2.7/biom/_filter.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so building 'biom._transform' extension aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_transform.c -o build/temp.linux-arm64-2.7/biom/_transform.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:632: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-QCkEc0/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-2.7/biom/_transform.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so building 'biom._subsample' extension aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/lib/python2.7/dist-packages/numpy/core/include -I/usr/include/python2.7 -c biom/_subsample.c -o build/temp.linux-arm64-2.7/biom/_subsample.o In file included from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:632: /usr/lib/python2.7/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-QCkEc0/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-2.7/biom/_subsample.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so pybuild --build --test-nose -i python{version} -p 3.7 I: pybuild base:217: /usr/bin/python3 setup.py build running build running build_py creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/parse.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/exception.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/err.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/test_util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/test_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/test_parse.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/test_err.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/long_lines.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests copying biom/tests/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/util.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_head.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli copying biom/cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' copying biom/_filter.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_filter.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_subsample.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.c -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom copying biom/_transform.pyx -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables copying biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data creating /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data running build_ext building 'biom._filter' extension creating build/temp.linux-arm64-3.7 creating build/temp.linux-arm64-3.7/biom aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_filter.c -o build/temp.linux-arm64-3.7/biom/_filter.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_filter.c:632: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/biom/_filter.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-aarch64-linux-gnu.so building 'biom._transform' extension aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_transform.c -o build/temp.linux-arm64-3.7/biom/_transform.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_transform.c:632: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/biom/_transform.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-aarch64-linux-gnu.so building 'biom._subsample' extension aarch64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.7m -c biom/_subsample.c -o build/temp.linux-arm64-3.7/biom/_subsample.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1822, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:4, from biom/_subsample.c:632: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ aarch64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/python-biom-format-2.1.7+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-arm64-3.7/biom/_subsample.o -o /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-aarch64-linux-gnu.so # indep: PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html Running Sphinx v1.8.4 making output directory... [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom.table': no module named biom.table Failed to import 'biom': no module named biom building [mo]: targets for 0 po files that are out of date building [html]: targets for 12 source files that are out of date updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [ 8%] BIOM_LICENSE writing output... [ 16%] documentation/adding_metadata writing output... [ 25%] documentation/biom_conversion writing output... [ 33%] documentation/biom_format writing output... [ 41%] documentation/format_versions/biom-1.0 writing output... [ 50%] documentation/format_versions/biom-2.0 writing output... [ 58%] documentation/format_versions/biom-2.1 writing output... [ 66%] documentation/index writing output... [ 75%] documentation/quick_usage_examples writing output... [ 83%] documentation/summarizing_biom_tables writing output... [ 91%] documentation/table_objects writing output... [100%] index /build/python-biom-format-2.1.7+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.7+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.7+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/python-biom-format-2.1.7+dfsg/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated generating indices... writing additional pages... search copying images... [100%] _static/biom-format.png copying static files... done copying extra files... done dumping search index in English (code: en) ... done dumping object inventory... done build succeeded, 6 warnings. The HTML pages are in build/html. PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man Running Sphinx v1.8.4 making output directory... [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst Failed to import 'biom.table': no module named biom.table Failed to import 'biom': no module named biom building [mo]: targets for 0 po files that are out of date building [man]: all manpages updating environment: 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 16%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 41%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 66%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 91%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } build succeeded, 2 warnings. The manual pages are in build/man. make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' cp -a examples /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build cp -a examples /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build dh_auto_test pybuild --test --test-nose -i python{version} -p 2.7 I: pybuild base:217: cd /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build; python2.7 -m nose -v Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (biom.tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.py:3981: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.py:3983: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (biom.tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok test_is_int (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (biom.tests.test_err.ErrModeTests) ... ok test_test_obsdup (biom.tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (biom.tests.test_err.ErrModeTests) ... ok test_test_obssize (biom.tests.test_err.ErrModeTests) ... ok test_test_sampdup (biom.tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (biom.tests.test_err.ErrModeTests) ... ok test_test_sampsize (biom.tests.test_err.ErrModeTests) ... ok test_contains (biom.tests.test_err.ErrorProfileTests) ... ok test_getcall (biom.tests.test_err.ErrorProfileTests) ... ok test_handle_error (biom.tests.test_err.ErrorProfileTests) ... ok test_register_unregister (biom.tests.test_err.ErrorProfileTests) ... ok test_setcall (biom.tests.test_err.ErrorProfileTests) ... ok test_state (biom.tests.test_err.ErrorProfileTests) ... ok test_test (biom.tests.test_err.ErrorProfileTests) ... ok test_errcheck (biom.tests.test_err.SupportTests) ... ok test_errstate (biom.tests.test_err.SupportTests) ... ok test_geterr (biom.tests.test_err.SupportTests) ... ok test_geterrcall (biom.tests.test_err.SupportTests) ... ok test_seterr (biom.tests.test_err.SupportTests) ... ok test_seterrcall (biom.tests.test_err.SupportTests) ... ok test_empty_metadata_inconsistent_handling (biom.tests.test_parse.ParseTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok sample id with underscores is correctly processed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (biom.tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (biom.tests.test_table.SparseTableTests) ... ok test_copy_ids (biom.tests.test_table.SparseTableTests) ... ok test_copy_metadata (biom.tests.test_table.SparseTableTests) ... ok test_data (biom.tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (biom.tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (biom.tests.test_table.SparseTableTests) ... ok test_filter_general_observation (biom.tests.test_table.SparseTableTests) ... ok test_filter_general_sample (biom.tests.test_table.SparseTableTests) ... ok test_filter_id_state (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_id (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (biom.tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (biom.tests.test_table.SparseTableTests) ... ok test_filter_return_type (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_id (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (biom.tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (biom.tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (biom.tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (biom.tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (biom.tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (biom.tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (biom.tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (biom.tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (biom.tests.test_table.SparseTableTests) ... ok test_pa (biom.tests.test_table.SparseTableTests) ... ok test_pa_with_neg (biom.tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (biom.tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (biom.tests.test_table.SparseTableTests) ... ok test_subsample_by_id (biom.tests.test_table.SparseTableTests) ... ok test_subsample_by_id_observations_bug (biom.tests.test_table.SparseTableTests) ... ok test_subsample_byid_with_replacement (biom.tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok test_subsample_with_replacement_n (biom.tests.test_table.SparseTableTests) ... ok As in scikit-bio. Given a vector of observations, the total number of ... ok As in scikit-bio. Given a vector of observations, the total number of ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (biom.tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (biom.tests.test_table.SparseTableTests) ... ok test_transform_sample (biom.tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (biom.tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_align_to_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_both (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_observation (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_sample (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_vary_values (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_both (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_both_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_observation (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_observation_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_sample (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_sample_no_overlap (biom.tests.test_table.SupportTests) ... ok test_concat_different_order (biom.tests.test_table.SupportTests) ... ok test_concat_empty (biom.tests.test_table.SupportTests) ... ok test_concat_multiple (biom.tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (biom.tests.test_table.SupportTests) ... ok test_concat_observations (biom.tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (biom.tests.test_table.SupportTests) ... ok test_concat_raise_overlap (biom.tests.test_table.SupportTests) ... ok test_concat_samples (biom.tests.test_table.SupportTests) ... ok test_concat_table_type (biom.tests.test_table.SupportTests) ... ok test_head (biom.tests.test_table.SupportTests) ... ok test_head_bounded (biom.tests.test_table.SupportTests) ... ok test_head_overstep (biom.tests.test_table.SupportTests) ... ok test_head_zero_or_neg (biom.tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (biom.tests.test_table.SupportTests) ... /usr/lib/python2.7/dist-packages/scipy/sparse/compressed.py:747: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_identity (biom.tests.test_table.SupportTests) ... ok test_remove_empty_obs (biom.tests.test_table.SupportTests) ... ok test_remove_empty_sample (biom.tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (biom.tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (biom.tests.test_table.TableTests) ... ok test_del_metadata_badaxis (biom.tests.test_table.TableTests) ... ok test_del_metadata_defaults (biom.tests.test_table.TableTests) ... ok test_del_metadata_empty_list (biom.tests.test_table.TableTests) ... ok test_del_metadata_full (biom.tests.test_table.TableTests) ... ok test_del_metadata_idempotent (biom.tests.test_table.TableTests) ... ok test_del_metadata_jagged (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (biom.tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (biom.tests.test_table.TableTests) ... ok test_del_metadata_nomd (biom.tests.test_table.TableTests) ... ok test_del_metadata_partial (biom.tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (biom.tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (biom.tests.test_table.TableTests) ... ok test_from_hdf5_non_hdf5_file_or_group (biom.tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (biom.tests.test_table.TableTests) ... ok test_from_tsv_dense (biom.tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (biom.tests.test_table.TableTests) ... ok test_max_observation (biom.tests.test_table.TableTests) ... ok test_max_sample (biom.tests.test_table.TableTests) ... ok test_max_whole (biom.tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (biom.tests.test_table.TableTests) ... ok test_min_observation (biom.tests.test_table.TableTests) ... ok test_min_sample (biom.tests.test_table.TableTests) ... ok test_min_whole (biom.tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (biom.tests.test_table.TableTests) ... ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (biom.tests.test_table.TableTests) ... ok test_to_dataframe_dense (biom.tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (biom.tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (biom.tests.test_table.TableTests) ... ok test_to_hdf5_inconsistent_metadata_categories_observation (biom.tests.test_table.TableTests) ... ok test_to_hdf5_inconsistent_metadata_categories_sample (biom.tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (biom.tests.test_table.TableTests) ... ok test_to_hdf5_missing_metadata_observation (biom.tests.test_table.TableTests) ... ok test_to_hdf5_missing_metadata_sample (biom.tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (biom.tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (biom.tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (biom.tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (biom.tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (biom.tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (biom.tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (biom.tests.test_util.UtilTests) ... ok test_load_classic (biom.tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (biom.tests.test_util.UtilTests) ... ok test_load_table_unicode (biom.tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 336 tests in 17.165s OK (SKIP=1) pybuild --test --test-nose -i python{version} -p 3.7 I: pybuild base:217: cd /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build; python3.7 -m nose -v Correctly adds observation metadata without casting it. ... ok Correctly adds observation metadata with casting. ... ok Correctly adds sample metadata without casting it. ... ok Correctly adds sample metadata with casting. ... ok test_default (biom.tests.test_cli.test_show_install_info.TestShowInstallInfo) ... ok Correctly raises politically correct error upon invalid input. ... ok Correctly subsets observations in a table. ... ok Correctly subsets samples in a hdf5 table ... /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3981: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3983: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) ok Correctly subsets samples in a table. ... ok Correctly subsets samples in a hdf5 table ... ok TableSummarizer functions as expected ... ok TableSummarizer functions as expected with qualitative=True ... ok Correctly converts biom to classic. ... ok Correctly converts biom to classic with metadata renaming. ... ok Correctly converts classic to biom. ... ok Correctly converts classic to biom with metadata. ... ok Correctly converts json to HDF5 changing the observation metadata ... ok Correctly converts json to HDF5 changing the sample metadata ... ok test_bad_inputs (biom.tests.test_cli.test_table_normalizer.TableNormalizerTests) ... ok test_basic (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_basic_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_missing_id (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_rep_set_no_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok test_uc_w_mapping (biom.tests.test_cli.test_uc_processor.TestUcProcessor) ... ok Correctly invalidates a table that is... invalid. ... ok Test an invalid HDF5 table ... ok test_is_int (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok Correctly validates a table that is indeed... valid. ... ok validates table:columns: fields ... ok validates data: fields ... ok Make sure we have a datetime stamp ... ok Takes a dense matrix field and validates ... ok Should match format string ... ok validates format url ... ok Should have some string for generated by ... ok Test a valid HDF5 table ... ok test_valid_hdf5_metadata_v200 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok test_valid_hdf5_metadata_v210 (biom.tests.test_cli.test_validate_table.TableValidatorTests) ... ok Make sure we have a valid matrix type ... ok Make sure we have a valid matrix type ... ok Can be nullable or an object ... ok Should just work. ... ok validates rows: field ... ok validates shape information ... ok Takes a sparse matrix field and validates ... ok Should be valid table type ... ok test_test_empty (biom.tests.test_err.ErrModeTests) ... ok test_test_obsdup (biom.tests.test_err.ErrModeTests) ... ok test_test_obsmdsize (biom.tests.test_err.ErrModeTests) ... ok test_test_obssize (biom.tests.test_err.ErrModeTests) ... ok test_test_sampdup (biom.tests.test_err.ErrModeTests) ... ok test_test_sampmdsize (biom.tests.test_err.ErrModeTests) ... ok test_test_sampsize (biom.tests.test_err.ErrModeTests) ... ok test_contains (biom.tests.test_err.ErrorProfileTests) ... ok test_getcall (biom.tests.test_err.ErrorProfileTests) ... ok test_handle_error (biom.tests.test_err.ErrorProfileTests) ... ok test_register_unregister (biom.tests.test_err.ErrorProfileTests) ... ok test_setcall (biom.tests.test_err.ErrorProfileTests) ... ok test_state (biom.tests.test_err.ErrorProfileTests) ... ok test_test (biom.tests.test_err.ErrorProfileTests) ... ok test_errcheck (biom.tests.test_err.SupportTests) ... ok test_errstate (biom.tests.test_err.SupportTests) ... ok test_geterr (biom.tests.test_err.SupportTests) ... ok test_geterrcall (biom.tests.test_err.SupportTests) ... ok test_seterr (biom.tests.test_err.SupportTests) ... ok test_seterrcall (biom.tests.test_err.SupportTests) ... ok test_empty_metadata_inconsistent_handling (biom.tests.test_parse.ParseTests) ... ok get a generatedby string ... ok MetadataMap functions as expected ... ok MetadataMap functions as expected w user-provided header ... ok MetadataMap functions as expected w process_fns ... ok test the biom otu table parser ... ok tests for parse_biom_table when we do not have h5py ... ok Make sure we can parse a HDF5 table through the same loader ... ok test the biom table parser subsetting ... ok tests for parse_biom_table when we have h5py ... ok empty uc file returns empty Table ... ok invalid query sequence identifier detected ... ok single library seed observed ... ok single new seed observed ... ok new and library seeds observed ... ok multiple new seeds observed ... ok sample id with underscores is correctly processed ... ok Yield tables binned by observation metadata ... ok Yield tables binned by sample metadata ... ok test_collapse_median (biom.tests.test_table.SparseTableTests) ... ok Collapse observations by arbitrary metadata ... ok Collapse observations by arbitary metadata ... ok Collapse observations by 1-M metadata using divide mode ... ok Collapse observations by arbitary metadata ... ok Collapse samples by arbitrary metadata ... ok Collapse samples by arbitary metadata ... ok Collapse samples by 1-M metadata using divide mode ... ok Collapse samples by arbitary metadata ... ok Should convert other to sparse type ... ok test_copy_data (biom.tests.test_table.SparseTableTests) ... ok test_copy_ids (biom.tests.test_table.SparseTableTests) ... ok test_copy_metadata (biom.tests.test_table.SparseTableTests) ... ok test_data (biom.tests.test_table.SparseTableTests) ... ok check equality between tables ... ok test_data_sparse (biom.tests.test_table.SparseTableTests) ... ok Print out self in a delimited form ... ok sparse equality ... ok Parses a classic table ... ok test_extract_data_from_tsv_badvalue_complaint (biom.tests.test_table.SparseTableTests) ... ok test_filter_general_observation (biom.tests.test_table.SparseTableTests) ... ok test_filter_general_sample (biom.tests.test_table.SparseTableTests) ... ok test_filter_id_state (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_id (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_invert (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_metadata (biom.tests.test_table.SparseTableTests) ... ok test_filter_observations_remove_everything (biom.tests.test_table.SparseTableTests) ... ok test_filter_out_full_table (biom.tests.test_table.SparseTableTests) ... ok test_filter_return_type (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_id (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_invert (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_metadata (biom.tests.test_table.SparseTableTests) ... ok test_filter_sample_remove_everything (biom.tests.test_table.SparseTableTests) ... ok test_filter_table_with_zeros (biom.tests.test_table.SparseTableTests) ... ok test_filter_using_list_of_ids (biom.tests.test_table.SparseTableTests) ... ok test_from_json_issue_697 (biom.tests.test_table.SparseTableTests) ... ok Test correctly computes density of table. ... ok test_identify_bad_value (biom.tests.test_table.SparseTableTests) ... ok Should iterate over samples ... ok test_iter_data_dense (biom.tests.test_table.SparseTableTests) ... ok test_iter_data_sparse (biom.tests.test_table.SparseTableTests) ... ok Iterate over observations of sparse matrix ... ok Iterates data by observations ... ok Iterates data by observations from a single sample. ... ok Iterates observations ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Should iterate pairwise over samples ... ok Iterate over samples of sparse matrix ... ok Iterates data by samples ... ok Iterates data by samples with a single observation. ... ok Iterates samples ... ok Merge two tables ... ok Return a list of nonzero positions ... ok Returns nonzero counts over an axis ... ok Returns nonzero counts over an axis ... ok test_nonzero_csc_bug (biom.tests.test_table.SparseTableTests) ... ok normalize observations by sample ... ok normalize sample by observation ... ok test_other_spmatrix_type (biom.tests.test_table.SparseTableTests) ... ok test_pa (biom.tests.test_table.SparseTableTests) ... ok test_pa_with_neg (biom.tests.test_table.SparseTableTests) ... ok test_pa_works_if_something_has_been_zeroed (biom.tests.test_table.SparseTableTests) ... ok rank observations by sample ... ok rank observations by sample with alt method ... ok rank samples by observation ... ok Reduce method ... ok table sorted by a function and provided axis ... ok sorts tables by arbitrary order ... ok test_subsample (biom.tests.test_table.SparseTableTests) ... ok test_subsample_by_id (biom.tests.test_table.SparseTableTests) ... ok test_subsample_by_id_observations_bug (biom.tests.test_table.SparseTableTests) ... ok test_subsample_byid_with_replacement (biom.tests.test_table.SparseTableTests) ... ok subsample would except when if metadata were present ... ok test_subsample_with_replacement_n (biom.tests.test_table.SparseTableTests) ... ok As in scikit-bio. Given a vector of observations, the total number of ... ok As in scikit-bio. Given a vector of observations, the total number of ... ok Test of sum! ... ok Should convert a self styled vector to numpy type ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of floats ... ok Get a BIOM format string for a dense table of integers ... ok Get a BIOM format string for a dense table of integers ... ok test_to_json_empty (biom.tests.test_table.SparseTableTests) ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of floats ... ok Get a BIOM format string for a sparse table of integers ... ok Get a BIOM format string for a sparse table of integers ... ok Transform axis by arbitrary function ... ok test_transform_return_type (biom.tests.test_table.SparseTableTests) ... ok test_transform_sample (biom.tests.test_table.SparseTableTests) ... ok Should transpose a sparse table ... ok ids are updated as expected ... ok test_update_ids_cache_bug (biom.tests.test_table.SparseTableTests) ... ok ids are updated as expected ... ok test_align_to_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_both (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_observation (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_sample (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_autodetect_vary_values (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_both (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_both_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_observation (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_observation_no_overlap (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_sample (biom.tests.test_table.SupportTests) ... ok test_align_to_overlap_sample_no_overlap (biom.tests.test_table.SupportTests) ... ok test_concat_different_order (biom.tests.test_table.SupportTests) ... ok test_concat_empty (biom.tests.test_table.SupportTests) ... ok test_concat_multiple (biom.tests.test_table.SupportTests) ... ok test_concat_no_metadata_bug (biom.tests.test_table.SupportTests) ... ok test_concat_observations (biom.tests.test_table.SupportTests) ... ok test_concat_pad_on_subset (biom.tests.test_table.SupportTests) ... ok test_concat_raise_overlap (biom.tests.test_table.SupportTests) ... ok test_concat_samples (biom.tests.test_table.SupportTests) ... ok test_concat_table_type (biom.tests.test_table.SupportTests) ... ok test_head (biom.tests.test_table.SupportTests) ... ok test_head_bounded (biom.tests.test_table.SupportTests) ... ok test_head_overstep (biom.tests.test_table.SupportTests) ... ok test_head_zero_or_neg (biom.tests.test_table.SupportTests) ... ok returns a dict for list lookups ... ok prefer x ... ok test_remove_empty_both (biom.tests.test_table.SupportTests) ... /usr/lib/python3/dist-packages/scipy/sparse/compressed.py:747: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok test_remove_empty_identity (biom.tests.test_table.SupportTests) ... ok test_remove_empty_obs (biom.tests.test_table.SupportTests) ... ok test_remove_empty_sample (biom.tests.test_table.SupportTests) ... ok Make sure a TableException can be raised ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok beat the table sparsely to death ... ok convert (values, (row, col)) to scipy ... ok Take a dict and convert to sparse ... ok Take a list of dicts and condense down to a single dict ... ok convert [[row,col,value], ...] to scipy ... ok lists of nparrays to sparse ... ok list of lil_matrix to sparse ... ok Convert nparray to sparse ... ok Convert to expected sparse types ... ok add group metadata works correctly ... ok add group metadata works with existing metadata ... ok add_sample_metadata functions with single md entry ... ok add_sample_metadata functions with existing metadata ... ok add_metadata functions with more than one md entry ... ok add_sample_metadata functions with more than one md entry ... ok test_all_keys_dropped (biom.tests.test_table.TableTests) ... ok Cast metadata objects to defaultdict to support default values ... ok Properly converts ScipySparseMat vectors to dense numpy repr. ... ok test_data_property (biom.tests.test_table.TableTests) ... ok test_del_metadata_badaxis (biom.tests.test_table.TableTests) ... ok test_del_metadata_defaults (biom.tests.test_table.TableTests) ... ok test_del_metadata_empty_list (biom.tests.test_table.TableTests) ... ok test_del_metadata_full (biom.tests.test_table.TableTests) ... ok test_del_metadata_idempotent (biom.tests.test_table.TableTests) ... ok test_del_metadata_jagged (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_observation (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_sample (biom.tests.test_table.TableTests) ... ok test_del_metadata_keys_none_whole (biom.tests.test_table.TableTests) ... ok test_del_metadata_multiple_keys (biom.tests.test_table.TableTests) ... ok test_del_metadata_nomd (biom.tests.test_table.TableTests) ... ok test_del_metadata_partial (biom.tests.test_table.TableTests) ... ok What's your type? ... ok Test whether two matrices are equal. ... ok Verify ValueError raised! ... ok Parse a hdf5 formatted BIOM table ... ok test_from_hdf5_custom_parsers (biom.tests.test_table.TableTests) ... ok Parse a hdf5 formatted BIOM table w/o metadata ... ok HDF5 biom parse successfully loads an empty table ... ok test_from_hdf5_issue_731 (biom.tests.test_table.TableTests) ... ok test_from_hdf5_non_hdf5_file_or_group (biom.tests.test_table.TableTests) ... ok Parse a observation subset of a hdf5 formatted BIOM table ... /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3981: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py:3983: FutureWarning: arrays to stack must be passed as a "sequence" type such as list or tuple. Support for non-sequence iterables such as generators is deprecated as of NumPy 1.16 and will raise an error in the future. for start, end in indptr_indices) ok Parse a observation subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok Parse a sample subset of a hdf5 formatted BIOM table ... ok hdf5 biom table parse throws error with invalid parameters ... ok test_from_tsv (biom.tests.test_table.TableTests) ... ok test_from_tsv_dense (biom.tests.test_table.TableTests) ... ok Test grabbing a column from the matrix. ... ok Test grabbing a row from the matrix. ... ok Return the value located in the matrix by the ids ... ok getitem should work as expeceted ... ok Test getting an element from the matrix. ... ok Handles invalid input ... ok Returns the observation group metadata ... ok Returns the sample group metadata ... ok Index all the ids!!! ... ok Correctly handles invalid input. ... ok returns the observation index ... ok returns the sample index ... ok to_sparse in constructor should be triggered ... ok Combine ids, intersection ... ok returns true if empty ... ok test_length (biom.tests.test_table.TableTests) ... ok test_max_observation (biom.tests.test_table.TableTests) ... ok test_max_sample (biom.tests.test_table.TableTests) ... ok test_max_whole (biom.tests.test_table.TableTests) ... ok Correctly handles invalid input. ... ok returns the observation metadata ... ok returns the observation metadata for a given id ... ok Return the sample metadata ... ok returns the sample metadata for a given id ... ok test_metadata_to_dataframe (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_badaxis (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_nomd (biom.tests.test_table.TableTests) ... ok test_metadata_to_dataframe_uneven_list_metadata (biom.tests.test_table.TableTests) ... ok test_min_observation (biom.tests.test_table.TableTests) ... ok test_min_sample (biom.tests.test_table.TableTests) ... ok test_min_whole (biom.tests.test_table.TableTests) ... ok Test whether two matrices are not equal. ... ok What is your NNZ? ... ok test_nnz_issue_727 (biom.tests.test_table.TableTests) ... /usr/lib/python3/dist-packages/scipy/sparse/compressed.py:747: SparseEfficiencyWarning: Changing the sparsity structure of a csr_matrix is expensive. lil_matrix is more efficient. SparseEfficiencyWarning) ok Verify observation exist! ... ok __repr__ method of biom.table.Table ... ok Verify samples exist! ... ok What kind of shape are you in? ... ok test_to_dataframe (biom.tests.test_table.TableTests) ... ok test_to_dataframe_dense (biom.tests.test_table.TableTests) ... ok Write a file ... ok test_to_hdf5_custom_formatters (biom.tests.test_table.TableTests) ... ok Successfully writes an empty OTU table in HDF5 format ... ok Successfully writes an empty OTU table in HDF5 format ... ok test_to_hdf5_general_fallback_to_list (biom.tests.test_table.TableTests) ... ok test_to_hdf5_inconsistent_metadata_categories_observation (biom.tests.test_table.TableTests) ... ok test_to_hdf5_inconsistent_metadata_categories_sample (biom.tests.test_table.TableTests) ... ok test_to_hdf5_malformed_taxonomy (biom.tests.test_table.TableTests) ... ok test_to_hdf5_missing_metadata_observation (biom.tests.test_table.TableTests) ... ok test_to_hdf5_missing_metadata_sample (biom.tests.test_table.TableTests) ... ok Print out self in a delimited form ... ok Combine unique ids, union ... ok Make sure the metadata is sane (including obs/sample ids) ... ok test_biom_open_empty (biom.tests.test_util.UtilTests) ... ok test_biom_open_hdf5 (biom.tests.test_util.UtilTests) ... ok test_biom_open_hdf5_no_h5py (biom.tests.test_util.UtilTests) ... SKIP: Skipping test: test_biom_open_hdf5_no_h5py: Can only be tested without H5PY test_biom_open_json (biom.tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok test_compute_counts_per_sample_stats_empty (biom.tests.test_util.UtilTests) ... ok compute_counts_per_sample_stats functions as expected ... ok flatten should remove one level of nesting from nested sequences ... ok flatten should not change non-nested sequences (except to list) ... ok test_generate_subsamples (biom.tests.test_util.UtilTests) ... ok Getting the biom project directory functions as expected. ... ok test_is_hdf5_file (biom.tests.test_util.UtilTests) ... ok test_load_classic (biom.tests.test_util.UtilTests) ... ok test_load_table_gzip_unicode (biom.tests.test_util.UtilTests) ... ok test_load_table_unicode (biom.tests.test_util.UtilTests) ... ok natsort should perform numeric comparisons on strings ... ok parse_biom_config_files functions as expected. ... ok Make sure we have the expected md5 with varied input types ... ok unzip(items) should be the inverse of zip(*items) ... ok ---------------------------------------------------------------------- Ran 336 tests in 22.414s OK (SKIP=1) make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2,python3,bash-completion,sphinxdoc --buildsystem=pybuild dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python-biom-format.substvars debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars debian/biom-format-tools.substvars rm -fr -- debian/.debhelper/generated/python-biom-format/ debian/python-biom-format/ debian/tmp/ debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/.debhelper/generated/python-biom-format-doc/ debian/python-biom-format-doc/ debian/.debhelper/generated/biom-format-tools/ debian/biom-format-tools/ rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' dh_auto_install install -d /build/python-biom-format-2.1.7\+dfsg/debian/tmp pybuild --install --test-nose -i python{version} -p 2.7 --dest-dir /build/python-biom-format-2.1.7\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python setup.py install --root /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format running install running build running build_py running egg_info writing requirements to biom_format.egg-info/requires.txt writing biom_format.egg-info/PKG-INFO writing top-level names to biom_format.egg-info/top_level.txt writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7 creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/sam_md.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/obs_md.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/examples/min_sparse_otu_table.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/examples creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.so -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.so -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.so -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/assets/exercise_api.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_transform.c -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_subsample.c -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/_filter.c -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/installation_informer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_converter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_head.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_ids.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/table_validator.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/cli/util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_util.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_table.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_parse.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_err.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/long_lines.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/__init__.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/bench_tables creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_validate_table.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_uc_processor.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_table_normalizer.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_table_converter.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_summarize_table.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_subset_table.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_show_install_info.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_add_metadata.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/__init__.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli creating /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/__init__.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/long_lines.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_err.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_parse.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/tests/test_util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/err.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/exception.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/parse.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython2_2.7_biom-format/build/biom/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.py to exercise_api.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.py to __init__.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.py to installation_informer.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.py to table_converter.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.py to table_head.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.py to table_ids.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.py to table_validator.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.py to uc_processor.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.py to util.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/__init__.py to __init__.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_data/__init__.py to __init__.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/__init__.py to __init__.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/long_lines.py to long_lines.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_err.py to test_err.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_parse.py to test_parse.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_table.py to test_table.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/tests/test_util.py to test_util.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.py to err.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.py to exception.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.py to parse.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.py to table.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.py to util.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.py to __init__.pyc running install_egg_info Copying biom_format.egg-info to /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.7.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format/usr/bin I: pybuild pybuild:298: dh_numpy (grep -a -s -v python:Depends debian/python-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python:Depends debian/python3-biom-format.substvars; echo "python:Depends=python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python:Depends debian/python-biom-format-doc.substvars; echo python:Depends=python-numpy) > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v python:Depends debian/biom-format-tools.substvars; echo "python:Depends=python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars pybuild --install --test-nose -i python{version} -p 3.7 --dest-dir /build/python-biom-format-2.1.7\+dfsg/debian/tmp I: pybuild base:217: /usr/bin/python3 setup.py install --root /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format running install running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution writing manifest file 'biom_format.egg-info/SOURCES.txt' running build_ext running install_lib creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7 creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/sam_md.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/rich_sparse_otu_table.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/obs_md.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/examples/min_sparse_otu_table.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/examples creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/parse.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/err.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/util.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/exception.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/table.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__pycache__/__init__.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.cpython-37m-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.cpython-37m-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.cpython-37m-aarch64-linux-gnu.so -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_cli.sh -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/assets/exercise_api.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_transform.c -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_subsample.c -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.pyx -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/_filter.c -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_validator.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_ids.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_head.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_converter.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/util.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__pycache__/__init__.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/installation_informer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/metadata_adder.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_converter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_head.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_ids.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_subsetter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_summarizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/table_validator.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/cli/util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_util.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_table.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_parse.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/test_err.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/long_lines.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__pycache__/__init__.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__pycache__ creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/bench_tables creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__pycache__ creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data creating /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/__pycache__/__init__.cpython-37.pyc -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__pycache__ copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.json.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.json -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/test.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/no-contents.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/empty.biom -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/bad_table.txt -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_data/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/long_lines.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_err.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_parse.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/tests/test_util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/err.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/exception.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/parse.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/table.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/util.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom copying /build/python-biom-format-2.1.7+dfsg/.pybuild/cpython3_3.7_biom-format/build/biom/__init__.py -> /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_converter.py to table_converter.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_head.py to table_head.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_ids.py to table_ids.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/table_validator.py to table_validator.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/cli/util.py to util.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/__init__.py to __init__.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/long_lines.py to long_lines.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_err.py to test_err.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_parse.py to test_parse.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_table.py to test_table.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/tests/test_util.py to test_util.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/err.py to err.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/exception.py to exception.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/parse.py to parse.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/table.py to table.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/util.py to util.cpython-37.pyc byte-compiling /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom/__init__.py to __init__.cpython-37.pyc running install_egg_info Copying biom_format.egg-info to /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/lib/python3.7/dist-packages/biom_format-2.1.7.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /build/python-biom-format-2.1.7+dfsg/debian/python3-biom-format/usr/bin I: pybuild pybuild:298: dh_numpy3 (grep -a -s -v python3:Depends debian/python-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python-biom-format.substvars.new mv debian/python-biom-format.substvars.new debian/python-biom-format.substvars (grep -a -s -v python3:Depends debian/python3-biom-format.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/python3-biom-format.substvars.new mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars (grep -a -s -v python3:Depends debian/python-biom-format-doc.substvars; echo python3:Depends=python3-numpy) > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v python3:Depends debian/biom-format-tools.substvars; echo "python3:Depends=python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9") > debian/biom-format-tools.substvars.new mv debian/biom-format-tools.substvars.new debian/biom-format-tools.substvars # Install command-line scripts in separate tools package. dh_install --sourcedir=debian/python3-biom-format \ --package=biom-format-tools usr/bin install -d debian/.debhelper/generated/python-biom-format install -d debian/.debhelper/generated/python3-biom-format install -d debian/.debhelper/generated/python-biom-format-doc install -d debian/biom-format-tools//usr cp --reflink=auto -a debian/python3-biom-format/usr/bin debian/biom-format-tools//usr/ install -d debian/.debhelper/generated/biom-format-tools rm -rf debian/python-biom-format/usr/bin rm -rf debian/python3-biom-format/usr/bin make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' dh_installdocs --indep install -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -d debian/python-biom-format-doc/usr/share/doc/python-biom-format cd './build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/python-biom-format-2.1.7+dfsg/debian/python-biom-format-doc/usr/share/doc/python-biom-format chown -R 0:0 debian/python-biom-format-doc/usr/share/doc chmod -R u\+rw,go=rX debian/python-biom-format-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/copyright install -d debian/python-biom-format-doc/usr/share/doc-base/ install -p -m0644 debian/python-biom-format-doc.doc-base debian/python-biom-format-doc/usr/share/doc-base/python-biom-format dh_sphinxdoc --indep ln -sf ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js dh_sphinxdoc: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/copybutton.js ln -sf ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js rm -rf debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/.doctrees rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/.buildinfo rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/websupport.js (grep -a -s -v sphinxdoc:Depends debian/python-biom-format-doc.substvars; echo "sphinxdoc:Depends=libjs-sphinxdoc (>= 1.0)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars (grep -a -s -v sphinxdoc:Built-Using debian/python-biom-format-doc.substvars; echo "sphinxdoc:Built-Using=sphinx (= 1.8.4-1)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' dh_installdocs -O--buildsystem=pybuild -Npython-biom-format-doc install -d debian/python-biom-format/usr/share/doc/python-biom-format install -p -m0644 debian/copyright debian/python-biom-format/usr/share/doc/python-biom-format/copyright install -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright install -d debian/biom-format-tools/usr/share/doc/biom-format-tools install -p -m0644 debian/copyright debian/biom-format-tools/usr/share/doc/biom-format-tools/copyright dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/copybutton.js (grep -a -s -v sphinxdoc:Built-Using debian/python-biom-format-doc.substvars; echo "sphinxdoc:Built-Using=sphinx (= 1.8.4-1)") > debian/python-biom-format-doc.substvars.new mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars dh_installchangelogs -O--buildsystem=pybuild install -p -m0644 debian/changelog debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog install -p -m0644 debian/changelog debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog install -p -m0644 debian/changelog debian/python-biom-format/usr/share/doc/python-biom-format/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python-biom-format/usr/share/doc/python-biom-format/changelog install -p -m0644 debian/changelog debian/biom-format-tools/usr/share/doc/biom-format-tools/changelog.Debian install -p -m0644 ./ChangeLog.md debian/biom-format-tools/usr/share/doc/biom-format-tools/changelog rm -f debian/python-biom-format-doc.debhelper.log debian/rules override_dh_installexamples make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' dh_installexamples find debian -name "*.c" -delete find debian -name "*.pyx" -delete # remove tests from Python2 package, move tests from Python3 package to examples package if [ ! -d biom/tests ] ; then \ mv `find debian/python*biom-format -name tests -type d` biom ; \ else \ find debian/python*biom-format -name tests -type d | xargs rm -rf ; \ fi make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' dh_python2 -O--buildsystem=pybuild D: dh_python2 dh_python2:393: version: 3.20190308 D: dh_python2 dh_python2:394: argv: ['/usr/share/dh-python/dh_python2', '-O--buildsystem=pybuild'] D: dh_python2 dh_python2:395: options: {'guess_versions': True, 'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'namespaces': None, 'clean_pycentral': False, 'shebang': None, 'ignore_shebangs': False, 'ignore_namespace': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python2 dh_python2:396: args: [] D: dh_python2 dh_python2:398: supported Python versions: 2.7 (default=2.7) D: dh_python2 debhelper:107: skipping package: python3-biom-format D: dh_python2 debhelper:100: skipping package biom-format-tools (missing ${python:Depends} in Depends) D: dh_python2 debhelper:153: source=python-biom-format, binary packages=['python-biom-format', 'python-biom-format-doc'] D: dh_python2 dh_python2:415: processing package python-biom-format... D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/__init__.pyc D: dh_python2 tools:232: invoking: /usr/bin/python2.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python2 fs:343: renaming _filter.so to _filter.aarch64-linux-gnu.so I: dh_python2 fs:343: renaming _subsample.so to _subsample.aarch64-linux-gnu.so I: dh_python2 fs:343: renaming _transform.so to _transform.aarch64-linux-gnu.so D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/err.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/exception.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/parse.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/table.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/util.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/__init__.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/installation_informer.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/metadata_adder.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_converter.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_head.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_ids.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_normalizer.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_subsetter.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_summarizer.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/table_validator.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/uc_processor.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/cli/util.pyc D: dh_python2 fs:209: removing unwanted: debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/assets/exercise_api.pyc D: dh_python2 fs:260: package python-biom-format details = {'requires.txt': {'debian/python-biom-format/usr/lib/python2.7/dist-packages/biom_format-2.1.7.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('2.7')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('2.7')}, 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biom-format D: dh_python2 pydist:138: trying to find dependency for click (python=2.7) D: dh_python2 pydist:138: trying to find dependency for future>=0.16.0 (python=2.7) D: dh_python2 pydist:138: trying to find dependency for numpy>=1.9.2 (python=2.7) D: dh_python2 pydist:138: trying to find dependency for pandas>=0.20.0 (python=2.7) D: dh_python2 pydist:138: trying to find dependency for pyqi (python=2.7) D: dh_python2 pydist:138: trying to find dependency for scipy>=0.13.0 (python=2.7) D: dh_python2 pydist:138: trying to find dependency for six>=1.10.0 (python=2.7) D: dh_python2 depends:272: D={'python-six (>= 1.10.0)', 'pyqi', 'python-scipy', 'python-pandas', 'python (<< 2.8)', 'python-click', 'python-future', 'python:any', 'python (>= 2.7~)', 'python:any (>= 2.7~)', 'python:any (<< 2.8)', 'python-numpy'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python2 dh_python2:415: processing package python-biom-format-doc... D: dh_python2 fs:260: package python-biom-format-doc details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python2 depends:114: generating dependencies for package python-biom-format-doc D: dh_python2 depends:272: D=set(); R=[]; S=[]; E=[], B=[]; RT=[] dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:161: version: 3.20190308 D: dh_python3 dh_python3:162: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:163: options: {'guess_deps': True, 'skip_private': False, 'verbose': False, 'arch': None, 'package': None, 'no_package': None, 'compile_all': False, 'vrange': None, 'regexpr': None, 'accept_upstream_versions': False, 'depends': None, 'depends_section': None, 'recommends': None, 'recommends_section': None, 'suggests': None, 'suggests_section': None, 'requires': None, 'shebang': None, 'ignore_shebangs': False, 'clean_dbg_pkg': True, 'no_ext_rename': False, 'no_shebang_rewrite': False, 'O': '--buildsystem=pybuild'} D: dh_python3 dh_python3:164: args: [] D: dh_python3 dh_python3:166: supported Python versions: 3.7 (default=3.7) D: dh_python3 debhelper:107: skipping package: python-biom-format D: dh_python3 debhelper:107: skipping package: python-biom-format-doc D: dh_python3 debhelper:153: source=python-biom-format, binary packages=['python3-biom-format', 'biom-format-tools'] D: dh_python3 dh_python3:183: processing package python3-biom-format... D: dh_python3 fs:49: moving files from debian/python3-biom-format/usr/lib/python3.7/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.7 -c 'import sysconfig as s;print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' D: dh_python3 fs:260: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.7.egg-info/requires.txt'}, 'egg-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.7')}, 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package python3-biom-format D: dh_python3 pydist:138: trying to find dependency for click (python=None) D: dh_python3 pydist:138: trying to find dependency for future>=0.16.0 (python=None) D: dh_python3 pydist:138: trying to find dependency for numpy>=1.9.2 (python=None) D: dh_python3 pydist:138: trying to find dependency for pandas>=0.20.0 (python=None) D: dh_python3 pydist:138: trying to find dependency for scipy>=0.13.0 (python=None) D: dh_python3 pydist:138: trying to find dependency for six>=1.10.0 (python=None) D: dh_python3 depends:272: D={'python3:any', 'python3-click', 'python3 (<< 3.8)', 'python3-scipy', 'python3-future', 'python3-numpy', 'python3 (>= 3.7~)', 'python3-six (>= 1.10.0)', 'python3-pandas'}; R=[]; S=[]; E=[], B=[]; RT=[] D: dh_python3 dh_python3:183: processing package biom-format-tools... D: dh_python3 fs:260: package biom-format-tools details = {'requires.txt': set(), 'egg-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': set(), 'private_dirs': {}, 'compile': False, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:114: generating dependencies for package biom-format-tools D: dh_python3 depends:272: D={'python3:any'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installinit -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js ln -s ../../../../javascript/sphinxdoc/1.0/jquery.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/jquery.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/doctools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/searchtools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js ln -s ../../../../javascript/sphinxdoc/1.0/underscore.js debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/underscore.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1550092427 as canonical time Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/up.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/up-pressed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/down.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment-close.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment-bright.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/down-pressed.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/comment.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/bg-page.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/alert_warning_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/alert_info_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_images/biom-format.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/bullet_orange.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format/html/_static/biom-format.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python-biom-format cd debian/python3-biom-format cd debian/python-biom-format-doc cd debian/biom-format-tools chmod a-x usr/share/doc/python-biom-format/changelog usr/share/doc/python-biom-format/changelog.Debian chmod a-x usr/share/doc/biom-format-tools/changelog usr/share/doc/biom-format-tools/changelog.Debian chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian gzip -9nf usr/share/doc/biom-format-tools/changelog usr/share/doc/biom-format-tools/changelog.Debian gzip -9nf usr/share/doc/python-biom-format/changelog usr/share/doc/python-biom-format/changelog.Debian gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian cd '/build/python-biom-format-2.1.7+dfsg' cd '/build/python-biom-format-2.1.7+dfsg' chmod a-x usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian cd '/build/python-biom-format-2.1.7+dfsg' gzip -9nf usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian cd '/build/python-biom-format-2.1.7+dfsg' rm -f debian/biom-format-tools.debhelper.log debian/python-biom-format-doc.debhelper.log debian/python-biom-format.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/build/python-biom-format-2.1.7+dfsg' dh_fixperms find debian/python-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biom-format-doc -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python3-biom-format -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/biom-format-tools -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/python-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools/usr/share/doc -type f -a -true -a ! -regex 'debian/biom-format-tools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/biom-format-tools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biom-format-tools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/biom-format-tools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python-biom-format-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biom-format-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian -name exercise_cli.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/python-biom-format-2.1.7+dfsg' dh_missing -O--buildsystem=pybuild dh_dwz -O--buildsystem=pybuild install -d debian/python-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -q -mdebian/python-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python-biom-format.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python-biom-format.debug -- debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so objcopy --compress-debug-sections debian/python-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python-biom-format.debug install -d debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -q -mdebian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug dh_strip -O--buildsystem=pybuild install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/637e18ccbbfc1217e4a659636a24f178ad1c74.debug install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/d1 objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/d1/28110d932df7d9b41fa6d3b9305c8f52fbaa93.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/637e18ccbbfc1217e4a659636a24f178ad1c74.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/637e18ccbbfc1217e4a659636a24f178ad1c74.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/d1/28110d932df7d9b41fa6d3b9305c8f52fbaa93.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/d1/28110d932df7d9b41fa6d3b9305c8f52fbaa93.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/637e18ccbbfc1217e4a659636a24f178ad1c74.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/d1/28110d932df7d9b41fa6d3b9305c8f52fbaa93.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c6 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c6/27dc6f7d84e0c9021f8244584f5a038c2d6242.debug install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/fa/95fee60f2a48d3d048141c089b24fc44d10588.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c6/27dc6f7d84e0c9021f8244584f5a038c2d6242.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c6/27dc6f7d84e0c9021f8244584f5a038c2d6242.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c6/27dc6f7d84e0c9021f8244584f5a038c2d6242.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c7/f9945c86239dc2c4dea5de68d8b7a8ae53cbb6.debug chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/fa/95fee60f2a48d3d048141c089b24fc44d10588.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/fa/95fee60f2a48d3d048141c089b24fc44d10588.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/fa/95fee60f2a48d3d048141c089b24fc44d10588.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/64/6041a813cca934a081396a1faf0c7f6c8a69ef.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c7/f9945c86239dc2c4dea5de68d8b7a8ae53cbb6.debug chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c7/f9945c86239dc2c4dea5de68d8b7a8ae53cbb6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/64/6041a813cca934a081396a1faf0c7f6c8a69ef.debug chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/64/6041a813cca934a081396a1faf0c7f6c8a69ef.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.build-id/64/6041a813cca934a081396a1faf0c7f6c8a69ef.debug debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/c7/f9945c86239dc2c4dea5de68d8b7a8ae53cbb6.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python-biom-format/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python-biom-format/usr/lib/debug/.dwz install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python-biom-format/usr/lib/debug rm -fr debian/python3-biom-format/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug install -d debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc ln -s python-biom-format debian/.debhelper/python-biom-format/dbgsym-root/usr/share/doc/python-biom-format-dbgsym install -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym dh_makeshlibs -O--buildsystem=pybuild rm -f debian/python-biom-format/DEBIAN/shlibs rm -f debian/python3-biom-format/DEBIAN/shlibs rm -f debian/python-biom-format-doc/DEBIAN/shlibs rm -f debian/biom-format-tools/DEBIAN/shlibs dh_shlibdeps -O--buildsystem=pybuild install -d debian/python-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python-biom-format.substvars debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so install -d debian/python3-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-37m-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-37m-aarch64-linux-gnu.so were not linked against libpthread.so.0 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_transform.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_filter.aarch64-linux-gnu.so debian/python-biom-format/usr/lib/python2.7/dist-packages/biom/_subsample.aarch64-linux-gnu.so were not linked against libpthread.so.0 (they use none of the library's symbols) dh_installdeb -O--buildsystem=pybuild printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/postinst cat debian/python-biom-format.postinst.debhelper >> debian/python-biom-format/DEBIAN/postinst chmod 0755 -- debian/python-biom-format/DEBIAN/postinst chown 0:0 -- debian/python-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python-biom-format/DEBIAN/prerm cat debian/python-biom-format.prerm.debhelper >> debian/python-biom-format/DEBIAN/prerm chmod 0755 -- debian/python-biom-format/DEBIAN/prerm chown 0:0 -- debian/python-biom-format/DEBIAN/prerm printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst chown 0:0 -- debian/python3-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm chown 0:0 -- debian/python3-biom-format/DEBIAN/prerm install -d debian/python-biom-format-doc/DEBIAN install -d debian/biom-format-tools/DEBIAN dh_gencontrol -O--buildsystem=pybuild echo misc:Depends= >> debian/python-biom-format-doc.substvars echo misc:Pre-Depends= >> debian/python-biom-format-doc.substvars dpkg-gencontrol -ppython-biom-format-doc -ldebian/changelog -Tdebian/python-biom-format-doc.substvars -Pdebian/python-biom-format-doc -UMulti-Arch echo misc:Depends= >> debian/biom-format-tools.substvars echo misc:Pre-Depends= >> debian/biom-format-tools.substvars dpkg-gencontrol -pbiom-format-tools -ldebian/changelog -Tdebian/biom-format-tools.substvars -Pdebian/biom-format-tools -UMulti-Arch echo misc:Depends= >> debian/python-biom-format.substvars echo misc:Pre-Depends= >> debian/python-biom-format.substvars install -d debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/.debhelper/python-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python-biom-format-dbgsym "-DDepends=python-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python-biom-format" "-DBuild-Ids=646041a813cca934a081396a1faf0c7f6c8a69ef d128110d932df7d9b41fa6d3b9305c8f52fbaa93 fa95fee60f2a48d3d048141c089b24fc44d10588" -DSection=debug -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/python3-biom-format.substvars echo misc:Pre-Depends= >> debian/python3-biom-format.substvars install -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=6a637e18ccbbfc1217e4a659636a24f178ad1c74 c627dc6f7d84e0c9021f8244584f5a038c2d6242 c7f9945c86239dc2c4dea5de68d8b7a8ae53cbb6" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package biom-format-tools: substitution variable ${python:Depends} unused, but is defined chmod 0644 -- debian/biom-format-tools/DEBIAN/control chown 0:0 -- debian/biom-format-tools/DEBIAN/control dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython-biom-format -ldebian/changelog -Tdebian/python-biom-format.substvars -Pdebian/python-biom-format -UMulti-Arch dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${python:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -Pdebian/python3-biom-format -UMulti-Arch chmod 0644 -- debian/python-biom-format-doc/DEBIAN/control chown 0:0 -- debian/python-biom-format-doc/DEBIAN/control dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-biom-format: substitution variable ${python:Versions} unused, but is defined chmod 0644 -- debian/python-biom-format/DEBIAN/control chown 0:0 -- debian/python-biom-format/DEBIAN/control dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-biom-format: substitution variable ${python:Depends} unused, but is defined chmod 0644 -- debian/python3-biom-format/DEBIAN/control chown 0:0 -- debian/python3-biom-format/DEBIAN/control dh_md5sums -O--buildsystem=pybuild cd debian/biom-format-tools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/biom-format-tools/DEBIAN/md5sums chown 0:0 -- debian/biom-format-tools/DEBIAN/md5sums cd debian/python-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-biom-format-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python3-biom-format/DEBIAN/md5sums chmod 0644 -- debian/python-biom-format/DEBIAN/md5sums chown 0:0 -- debian/python-biom-format/DEBIAN/md5sums chmod 0644 -- debian/python-biom-format-doc/DEBIAN/md5sums chown 0:0 -- debian/python-biom-format-doc/DEBIAN/md5sums cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/python-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/python-biom-format/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --build debian/python-biom-format .. dpkg-deb --build debian/.debhelper/python-biom-format/dbgsym-root .. dpkg-deb --build debian/python3-biom-format .. dpkg-deb --build debian/.debhelper/python3-biom-format/dbgsym-root .. dpkg-deb --build debian/biom-format-tools .. dpkg-deb --build debian/python-biom-format-doc .. dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.7+dfsg-2_arm64.deb'. dpkg-deb: building package 'python-biom-format-dbgsym' in '../python-biom-format-dbgsym_2.1.7+dfsg-2_arm64.deb'. dpkg-deb: building package 'python-biom-format-doc' in '../python-biom-format-doc_2.1.7+dfsg-2_all.deb'. dpkg-deb: building package 'biom-format-tools' in '../biom-format-tools_2.1.7+dfsg-2_arm64.deb'. dpkg-deb: building package 'python-biom-format' in '../python-biom-format_2.1.7+dfsg-2_arm64.deb'. dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.7+dfsg-2_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../python-biom-format_2.1.7+dfsg-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/13698 and its subdirectories I: Current time: Tue Oct 5 15:00:24 -12 2021 I: pbuilder-time-stamp: 1633489224